Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000273

Physical Location & Seq

Genomic Coordinates Forward (+)

80995548 .. 80998741

Gene Structure 3194 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G046720.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGGGGAAGAAGGAAGGAGGAGAAGGAGAAGAGAGTAGTAGTACTACTACTACTACTACTCTTCCATTGTTTGAGAGCAAAACAGCAAGATTTAGAGGTGTTTATAGGGTTTTTGCCTCAACTATATTTGTGGGTGTGTGTTTGATATGGGTGTACAGACTAATAAACATCCCGAAAGCTGGAGAGAGAGGGAGATGGGCGTGGATTGGTATGCTCATGGCTGAGTTCTTGTTTGGTTTGTATTGGATCATCACTCAGTCTGTTCGCTGGAGTGTCACTTATCGTCAACCTCTCAAGAATAGACTCGCACAGAGATATGAGGAGAAGTTGCCGGGTGTTGATGTTTTTATATGCACTGCGGACCCGAAAATGGAGCCGCCAAGTTTGGTGATTAACACTGTGTTATCAGTCCTGTCCTGCAATTTTCCATCTGAGAAGTTGAGTGTTTATCTCTCGGATGATGGCGGTTCACAGTTTACTTTCTATGCTCTTTTGGAGGCGTCTCGGTTCTCGAAGTATTGGATACCCTTTTGCAAGAAGTTCAAGGTTGAACCAAGGGCACCGGAGGCTTACTTTACCCTGCATTCTGACGTTAATGAACCAATTATGAAACTTTATGAAGAAATGAAAAATCGGATCGATTCTGTTGTTGAAAGTGGGAAGATACCAGAAGAAACAAGGAATCAACACAAAGGGTTCTCAGAATGGAACCTTAAAGTAGCAAAGAATGATCATCACTCAATTGTGCAGATTATAACTGATGGAAGAGACACAAATGCCGTGGACAACGATGGATGCCGATTACCAACTATTGTCTACATGTCAAGAGAAAAGAGACCCCAACAGCCACACAACTTCAAAGCTGGAGCCATGAATGCACTGCTGAGAGTGTCATCAGAGATAAGCAATGCACCCTTCATTCTCAACTTGGACTGTGACATGTACGCAAACAATGCAGATGCAATACGAGAGGCACTTTGTTTCTTCTTGGATGAAAAGACTGGCCACGAGACTGCTTATGTGCAACATCCGCAGTTCTACAACAATCTCACAAAGAATGATATTTATGGAAATGCATGCTTCGTAACTAGTGCGGTTGAACTGGCTGGGTTAGGTGGATATGGAGCGGCCTTGTATTGTGGCACCGGATGTTTCCATCGAAGAGAATGTCTCTGTGGAAAGAAGTATTCAAAGGGTTACACAGAAAAATGGAACATTGATGGCCAGAAGAGTACTATTGACAAAAGTATCCAAGAATTGGAGGAATCTACGAAACCTCTTATCGATTGTAGCTATGAAAAGGGCAGTCAATGGGGAAAAGAGATGGGACTGATATATGGATGCCCTGTCGAAGATATAGTTACTGGTTTGGCAATACAATGCAGGGGTTGGAAATCAGTTTATTACAATCCAGAAAGGCCTTCCTTTGTTGGTGTTGCTCCAAACACCCTAGAAATCGCACTTGTTCAACAAAAGAGGTGGTCTGAGGGCATGTTTCAGATATTTGTCTCCGAGTATTGCCCTTTCATATATGGACATGGGAAGATACACTTTGGTGCCCAAATGGGATATTGCCTCTACCTTCTATGGGCTCCAGTTTCATTCCCAACTTTGTATTATGCACTTGTTCCTCCTCTTTGCTTGCTCCATGGCATTCCCTTGTTCCCCAAGGTGTCAAGCCTATGGTTCCTAGCATTTGCTTATGTTTTTGTAGCAAAGAATGCATACAGCATAGTTGAATTTGTGATGTGTGGCGGTAAACTCAAAGCATGGTGGAACCTACAAAGAATGTGGCTTATCCGACGAATCACTTCGTACTTCTTTGCCTTCTTCGACACCATAAAGAGGCAATTGGGGATATCTGAAACACACTTTGCCCTCACCGATAAGGTTGTCACCGAGGATGTGATAAAGAGGTACGAGCAGGAGGTTTTGGAATTTGGAAGCTCAAGCATTATGTACACTGTAATGGCAACATCGGCATTGCTGAACTTGGTGAGCCTAGTTTGGGGAACAAAGCGGGTTGTGATGGATTTAGAGTTGAAGGCCTTAGACCAGTTCATTAGTCAAGTTATTCTTTGTGGCATATTGGTTTTGATCAACATACCAGTGTATGAAGCTCTCTTCTTGCGCAGTGATAAGGGCCATATACCCTCCTCTGTCATGTACAAGTCTGTCTTTGTGCTCACGTTGGCATGCTTGATGCCTATATGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

738

Amino Acids

83.91

Weight (kDa)

8.06

Isoelectric Point (pI)

41.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	113 - 398	8.1e-86	Cellulose synthase
Cellulose_synt	PF03552	421 - 731	4.5e-42	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55850
fragaria_vesca	FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica	MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica	Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis	pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis	RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata	RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora	Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii	Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa	Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha	Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana	Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	755
Acc16I	TGCGCA	1 cut(s)	2132
AccB1I	GGYRCC	3 cut(s)	559, 1142, 1556
AccB7I	CCANNNNNTGG	1 cut(s)	1258
AccBSI	CCGCTC	1 cut(s)	1127
AccI	GTMKAC	1 cut(s)	816
AciI	CCGC	8 cut(s)	359, 377, 465, 1031, 1094, 1127, 1755, 2020
AclWI	GGATC	2 cut(s)	254, 644
AcoI	YGGCCR	2 cut(s)	1003, 1222
AcsI	RAATTY	2 cut(s)	1739, 1937
AcyI	GRCGYC	1 cut(s)	500
AfaI	GTAC	8 cut(s)	43, 155, 944, 1234, 1817, 1919, 1961, 2168
AfiI	CCNNNNNNNGG	6 cut(s)	179, 370, 1258, 1588, 1845, 2008
AflIII	ACRYGT	2 cut(s)	819, 939
AgsI	TTSAA	9 cut(s)	544, 551, 653, 859, 1100, 1191, 1469, 1739, 2044
AhlI	ACTAGT	1 cut(s)	1088
AleI	CACNNNNGTG	1 cut(s)	1554
AluBI	AGCT	5 cut(s)	179, 863, 1293, 1947, 2120
AluI	AGCT	5 cut(s)	179, 863, 1293, 1947, 2120
Alw21I	GWGCWC	1 cut(s)	2187
Alw26I	GTCTC	6 cut(s)	507, 762, 829, 1004, 1175, 1513
AlwI	GGATC	2 cut(s)	254, 644
AoxI	GGCC	6 cut(s)	1003, 1128, 1222, 1418, 2046, 2143
ApoI	RAATTY	2 cut(s)	1739, 1937
ArsI	GACNNNNNNTTYG	2 cut(s)	1153, 1185
Asp700I	GAANNNNTTC	1 cut(s)	1810
AspLEI	GCGC	1 cut(s)	2133
AspS9I	GGNCC	2 cut(s)	361, 2143
AsuC2I	CCSGG	1 cut(s)	333
AsuHPI	GGTGA	4 cut(s)	400, 1873, 1888, 2008
AvaII	GGWCC	1 cut(s)	361
BaeGI	GKGCMC	2 cut(s)	562, 1561
BaeI	ACNNNNGTAYC	2 cut(s)	1231, 1264
BalI	TGGCCA	2 cut(s)	1005, 1224
BanI	GGYRCC	3 cut(s)	559, 1142, 1556
BanII	GRGCYC	1 cut(s)	1594
BauI	CACGAG	1 cut(s)	1007
Bbv12I	GWGCWC	1 cut(s)	2187
BccI	CCATC	9 cut(s)	189, 436, 455, 755, 785, 1164, 1214, 1318, 2023
BceAI	ACGGC	1 cut(s)	764
BciVI	GTATCC	2 cut(s)	516, 1259
BclI	TGATCA	2 cut(s)	730, 2097
BcnI	CCSGG	1 cut(s)	333
BcoDI	GTCTC	6 cut(s)	507, 762, 829, 1004, 1175, 1513
BcuI	ACTAGT	1 cut(s)	1088
BfaI	CTAG	5 cut(s)	1089, 1451, 1691, 2003, 2215
BfuI	GTATCC	2 cut(s)	516, 1259
BisI	GCNGC	2 cut(s)	377, 1128
BlsI	GCNGC	2 cut(s)	378, 1129
BmcAI	AGTACT	2 cut(s)	43, 1234
Bme1390I	CCNGG	1 cut(s)	333
Bme18I	GGWCC	1 cut(s)	361
BmgT120I	GGNCC	2 cut(s)	361, 2143
BmrFI	CCNGG	1 cut(s)	333
BmsI	GCATC	4 cut(s)	785, 949, 1331, 2193
BplI	GAGNNNNNCTC	2 cut(s)	1155, 1187
BpmI	CTGGAG	4 cut(s)	201, 289, 885, 1578
BpuEI	CTTGAG	2 cut(s)	278, 1933
BpuMI	CCSGG	1 cut(s)	333
Bsa29I	ATCGAT	2 cut(s)	639, 1284
BsaHI	GRCGYC	1 cut(s)	500
BsaI	GGTCTC	1 cut(s)	829
BsaJI	CCNNGG	5 cut(s)	554, 780, 1648, 1668, 1899
BsaWI	WCCGGW	2 cut(s)	562, 1145
Bsc4I	CCNNNNNNNGG	6 cut(s)	179, 370, 1258, 1588, 1845, 2008
Bse1I	ACTGG	6 cut(s)	1006, 1107, 1369, 1595, 2056, 2108
Bse3DI	GCAATG	2 cut(s)	913, 1982
BseCI	ATCGAT	2 cut(s)	639, 1284
BseDI	CCNNGG	5 cut(s)	554, 780, 1648, 1668, 1899
BseGI	GGATG	8 cut(s)	168, 463, 800, 997, 1027, 1154, 1346, 1909
BseLI	CCNNNNNNNGG	6 cut(s)	179, 370, 1258, 1588, 1845, 2008
BseMI	GCAATG	2 cut(s)	913, 1982
BseMII	CTCAG	6 cut(s)	213, 269, 423, 714, 875, 1476
BseNI	ACTGG	6 cut(s)	1006, 1107, 1369, 1595, 2056, 2108
BseRI	GAGGAG	4 cut(s)	33, 335, 1623, 2146
BseSI	GKGCMC	2 cut(s)	562, 1561
BseYI	CCCAGC	1 cut(s)	1106
BsgI	GTGCAG	1 cut(s)	767
BshFI	GGCC	6 cut(s)	1005, 1130, 1224, 1420, 2048, 2145
BshNI	GGYRCC	3 cut(s)	559, 1142, 1556
BshVI	ATCGAT	2 cut(s)	639, 1284
BsiHKAI	GWGCWC	1 cut(s)	2187
BsiSI	CCGG	3 cut(s)	332, 563, 1146
BslFI	GGGAC	1 cut(s)	1341
BslI	CCNNNNNNNGG	6 cut(s)	179, 370, 1258, 1588, 1845, 2008
BsmAI	GTCTC	6 cut(s)	507, 762, 829, 1004, 1175, 1513
BsmBI	CGTCTC	1 cut(s)	507
BsmFI	GGGAC	1 cut(s)	1341
BsmI	GAATGC	4 cut(s)	583, 880, 1653, 1726
BsnI	GGCC	6 cut(s)	1005, 1130, 1224, 1420, 2048, 2145
Bso31I	GGTCTC	1 cut(s)	829
Bsp1286I	GDGCHC	4 cut(s)	562, 1561, 1594, 2187
Bsp1407I	TGTACA	3 cut(s)	153, 1959, 2166
Bsp143I	GATC	4 cut(s)	246, 636, 730, 2097
Bsp19I	CCATGG	1 cut(s)	1648
BspACI	CCGC	8 cut(s)	359, 377, 465, 1031, 1094, 1127, 1755, 2020
BspANI	GGCC	6 cut(s)	1005, 1130, 1224, 1420, 2048, 2145
BspCNI	CTCAG	6 cut(s)	214, 268, 424, 713, 876, 1477
BspDI	ATCGAT	2 cut(s)	639, 1284
BspPI	GGATC	2 cut(s)	254, 644
BspT107I	GGYRCC	3 cut(s)	559, 1142, 1556
BspTNI	GGTCTC	1 cut(s)	829
BsrBI	CCGCTC	1 cut(s)	1127
BsrDI	GCAATG	2 cut(s)	913, 1982
BsrGI	TGTACA	3 cut(s)	153, 1959, 2166
BsrI	ACTGG	6 cut(s)	1006, 1107, 1369, 1595, 2056, 2108
BssECI	CCNNGG	5 cut(s)	554, 780, 1648, 1668, 1899
BssMI	GATC	4 cut(s)	246, 636, 730, 2097
BssNI	GRCGYC	1 cut(s)	500
BssSI	CACGAG	1 cut(s)	1007
BssT1I	CCWWGG	3 cut(s)	554, 1648, 1668
Bst2BI	CACGAG	1 cut(s)	1007
Bst4CI	ACNGT	4 cut(s)	400, 474, 935, 1966
Bst6I	CTCTTC	6 cut(s)	24, 66, 760, 1156, 1223, 2129
BstACI	GRCGYC	1 cut(s)	500
BstAPI	GCANNNNNTGC	2 cut(s)	953, 1721
BstAUI	TGTACA	3 cut(s)	153, 1959, 2166
BstC8I	GCNNGC	3 cut(s)	1078, 1643, 2197
BstDEI	CTNAG	7 cut(s)	222, 255, 432, 700, 884, 1485, 2050
BstDSI	CCRYGG	2 cut(s)	780, 1648
BstF5I	GGATG	8 cut(s)	168, 463, 800, 997, 1027, 1154, 1346, 1909
BstHHI	GCGC	1 cut(s)	2133
BstKTI	GATC	4 cut(s)	249, 639, 733, 2100
BstMAI	GTCTC	6 cut(s)	507, 762, 829, 1004, 1175, 1513
BstMBI	GATC	4 cut(s)	246, 636, 730, 2097
BstMWI	GCNNNNNNNGC	6 cut(s)	566, 875, 953, 1030, 1721, 1979
BstNSI	RCATGY	5 cut(s)	823, 943, 1080, 1495, 2199
BstSCI	CCNGG	1 cut(s)	331
BstSLI	GKGCMC	2 cut(s)	562, 1561
Bsu15I	ATCGAT	2 cut(s)	639, 1284
BsuI	GTATCC	2 cut(s)	516, 1259
BsuRI	GGCC	6 cut(s)	1005, 1130, 1224, 1420, 2048, 2145
BsuTUI	ATCGAT	2 cut(s)	639, 1284
BtgI	CCRYGG	2 cut(s)	780, 1648
BtsCI	GGATG	8 cut(s)	168, 463, 800, 997, 1027, 1154, 1346, 1909
BtsI	GCAGTG	3 cut(s)	354, 878, 2140
BtsIMutI	CAGTG	6 cut(s)	354, 396, 878, 1962, 2115, 2140
Cac8I	GCNNGC	3 cut(s)	1078, 1643, 2197
CfoI	GCGC	1 cut(s)	2133
Cfr13I	GGNCC	2 cut(s)	361, 2143
ClaI	ATCGAT	2 cut(s)	639, 1284
CseI	GACGC	1 cut(s)	489
Csp6I	GTAC	8 cut(s)	42, 154, 943, 1233, 1816, 1918, 1960, 2167
CspCI	CAANNNNNGTGG	6 cut(s)	762, 797, 1460, 1495, 1772, 1807
CviQI	GTAC	8 cut(s)	42, 154, 943, 1233, 1816, 1918, 1960, 2167
DdeI	CTNAG	7 cut(s)	222, 255, 432, 700, 884, 1485, 2050
DpnI	GATC	4 cut(s)	248, 638, 732, 2099
DpnII	GATC	4 cut(s)	246, 636, 730, 2097
EaeI	YGGCCR	2 cut(s)	1003, 1222
Eam1104I	CTCTTC	6 cut(s)	24, 66, 760, 1156, 1223, 2129
EarI	CTCTTC	6 cut(s)	24, 66, 760, 1156, 1223, 2129
Eco130I	CCWWGG	3 cut(s)	554, 1648, 1668
Eco147I	AGGCCT	2 cut(s)	1420, 2048
Eco24I	GRGCYC	1 cut(s)	1594
Eco31I	GGTCTC	1 cut(s)	829
Eco32I	GATATC	1 cut(s)	1860
Eco47I	GGWCC	1 cut(s)	361
EcoRV	GATATC	1 cut(s)	1860
EcoT14I	CCWWGG	3 cut(s)	554, 1648, 1668
EcoT22I	ATGCAT	2 cut(s)	1078, 1726
EcoT38I	GRGCYC	1 cut(s)	1594
ErhI	CCWWGG	3 cut(s)	554, 1648, 1668
Esp3I	CGTCTC	1 cut(s)	507
FalI	AAGNNNNNCTT	6 cut(s)	1535, 1567, 2061, 2093, 2162, 2194
FaqI	GGGAC	1 cut(s)	1341
FauI	CCCGC	1 cut(s)	2013
FbaI	TGATCA	2 cut(s)	730, 2097
FblI	GTMKAC	1 cut(s)	816
Fnu4HI	GCNGC	2 cut(s)	377, 1128
FokI	GGATG	8 cut(s)	155, 470, 807, 1004, 1014, 1161, 1353, 1916
FriOI	GRGCYC	1 cut(s)	1594
Fsp4HI	GCNGC	2 cut(s)	377, 1128
FspBI	CTAG	5 cut(s)	1089, 1451, 1691, 2003, 2215
FspI	TGCGCA	1 cut(s)	2132
GlaI	GCGC	1 cut(s)	2132
GluI	GCNGC	2 cut(s)	377, 1128
GsaI	CCCAGC	1 cut(s)	1110
GsuI	CTGGAG	4 cut(s)	201, 289, 885, 1578
HaeIII	GGCC	6 cut(s)	1005, 1130, 1224, 1420, 2048, 2145
HapII	CCGG	3 cut(s)	332, 563, 1146
HgaI	GACGC	1 cut(s)	489
HhaI	GCGC	1 cut(s)	2133
Hin1I	GRCGYC	1 cut(s)	500
Hin6I	GCGC	1 cut(s)	2131
HinP1I	GCGC	1 cut(s)	2131
HincII	GTYRAC	1 cut(s)	287
HindII	GTYRAC	1 cut(s)	287
HinfI	GANTC	5 cut(s)	303, 641, 682, 1265, 1806
HpaII	CCGG	3 cut(s)	332, 563, 1146
HphI	GGTGA	4 cut(s)	400, 1873, 1888, 2008
Hpy166II	GTNNAC	8 cut(s)	154, 287, 470, 477, 784, 817, 1760, 1962
Hpy188III	TCNNGA	5 cut(s)	172, 295, 511, 825, 1412
Hpy8I	GTNNAC	8 cut(s)	154, 287, 470, 477, 784, 817, 1760, 1962
Hpy99I	CGWCG	1 cut(s)	1806
HpyAV	CCTTC	8 cut(s)	4, 8, 17, 925, 1431, 1592, 1837, 2038
HpyCH4III	ACNGT	4 cut(s)	400, 474, 935, 1966
HpyCH4IV	ACGT	2 cut(s)	591, 2189
HpyF10VI	GCNNNNNNNGC	6 cut(s)	566, 875, 953, 1030, 1721, 1979
HpyF3I	CTNAG	7 cut(s)	222, 255, 432, 700, 884, 1485, 2050
HpySE526I	ACGT	2 cut(s)	591, 2189
Hsp92I	GRCGYC	1 cut(s)	500
HspAI	GCGC	1 cut(s)	2131
Ksp22I	TGATCA	2 cut(s)	730, 2097
Kzo9I	GATC	4 cut(s)	246, 636, 730, 2097
LmnI	GCTCC	6 cut(s)	373, 866, 1124, 1444, 1597, 1650
LweI	GCATC	4 cut(s)	785, 949, 1331, 2193
MaeI	CTAG	5 cut(s)	1089, 1451, 1691, 2003, 2215
MaeII	ACGT	2 cut(s)	591, 2189
MaeIII	GTNAC	6 cut(s)	274, 935, 1084, 1196, 1360, 1894
MalI	GATC	4 cut(s)	248, 638, 732, 2099
MbiI	CCGCTC	1 cut(s)	1127
MboI	GATC	4 cut(s)	246, 636, 730, 2097
MfeI	CAATTG	2 cut(s)	741, 1850
MhlI	GDGCHC	4 cut(s)	562, 1561, 1594, 2187
MlsI	TGGCCA	2 cut(s)	1005, 1224
MluCI	AATT	7 cut(s)	421, 603, 741, 1256, 1739, 1850, 1937
MluNI	TGGCCA	2 cut(s)	1005, 1224
MlyI	GAGTC	1 cut(s)	297
MmeI	TCCRAC	2 cut(s)	1370, 1825
Mox20I	TGGCCA	2 cut(s)	1005, 1224
Mph1103I	ATGCAT	2 cut(s)	1078, 1726
MroXI	GAANNNNTTC	1 cut(s)	1810
MscI	TGGCCA	2 cut(s)	1005, 1224
MseI	TTAA	3 cut(s)	393, 594, 714
MslI	CAYNNNNRTG	3 cut(s)	1554, 1967, 2108
Msp20I	TGGCCA	2 cut(s)	1005, 1224
MspI	CCGG	3 cut(s)	332, 563, 1146
MspR9I	CCNGG	1 cut(s)	333
MunI	CAATTG	2 cut(s)	741, 1850
Mva1269I	GAATGC	4 cut(s)	583, 880, 1653, 1726
MwoI	GCNNNNNNNGC	6 cut(s)	566, 875, 953, 1030, 1721, 1979
NciI	CCSGG	1 cut(s)	333
NcoI	CCATGG	1 cut(s)	1648
NdeII	GATC	4 cut(s)	246, 636, 730, 2097
NmuCI	GTSAC	3 cut(s)	274, 935, 1894
NsbI	TGCGCA	1 cut(s)	2132
NsiI	ATGCAT	2 cut(s)	1078, 1726
NspI	RCATGY	5 cut(s)	823, 943, 1080, 1495, 2199
OliI	CACNNNNGTG	1 cut(s)	1554
PaeI	GCATGC	2 cut(s)	1080, 2199
PceI	AGGCCT	2 cut(s)	1420, 2048
PciI	ACATGT	2 cut(s)	819, 939
PctI	GAATGC	4 cut(s)	583, 880, 1653, 1726
PdmI	GAANNNNTTC	1 cut(s)	1810
PfeI	GAWTC	4 cut(s)	641, 682, 1265, 1806
PflMI	CCANNNNNTGG	1 cut(s)	1258
PkrI	GCNGC	2 cut(s)	378, 1129
PleI	GAGTC	1 cut(s)	297
PpsI	GAGTC	1 cut(s)	297
PscI	ACATGT	2 cut(s)	819, 939
PsiI	TTATAA	1 cut(s)	755
PspFI	CCCAGC	1 cut(s)	1106
PspPI	GGNCC	2 cut(s)	361, 2143
RsaI	GTAC	8 cut(s)	43, 155, 944, 1234, 1817, 1919, 1961, 2168
RsaNI	GTAC	8 cut(s)	42, 154, 943, 1233, 1816, 1918, 1960, 2167
RseI	CAYNNNNRTG	3 cut(s)	1554, 1967, 2108
SaqAI	TTAA	3 cut(s)	393, 594, 714
SatI	GCNGC	2 cut(s)	377, 1128
Sau3AI	GATC	4 cut(s)	246, 636, 730, 2097
Sau96I	GGNCC	2 cut(s)	361, 2143
ScaI	AGTACT	2 cut(s)	43, 1234
SchI	GAGTC	1 cut(s)	297
ScrFI	CCNGG	1 cut(s)	333
SduI	GDGCHC	4 cut(s)	562, 1561, 1594, 2187
SfaNI	GCATC	4 cut(s)	785, 949, 1331, 2193
SinI	GGWCC	1 cut(s)	361
SmiMI	CAYNNNNRTG	3 cut(s)	1554, 1967, 2108
SmlI	CTYRAG	2 cut(s)	293, 1948
SmoI	CTYRAG	2 cut(s)	293, 1948
SpeI	ACTAGT	1 cut(s)	1088
SphI	GCATGC	2 cut(s)	1080, 2199
Sse9I	AATT	7 cut(s)	421, 603, 741, 1256, 1739, 1850, 1937
SseBI	AGGCCT	2 cut(s)	1420, 2048
SsiI	CCGC	8 cut(s)	359, 377, 465, 1031, 1094, 1127, 1755, 2020
SspMI	CTAG	5 cut(s)	1089, 1451, 1691, 2003, 2215
StuI	AGGCCT	2 cut(s)	1420, 2048
StyD4I	CCNGG	1 cut(s)	331
StyI	CCWWGG	3 cut(s)	554, 1648, 1668
TaaI	ACNGT	4 cut(s)	400, 474, 935, 1966
TaiI	ACGT	2 cut(s)	594, 2192
TaqI	TCGA	6 cut(s)	512, 639, 1159, 1284, 1350, 1833
TasI	AATT	7 cut(s)	421, 603, 741, 1256, 1739, 1850, 1937
TatI	WGTACW	5 cut(s)	41, 153, 1232, 1959, 2166
TauI	GCSGC	2 cut(s)	379, 1130
TfiI	GAWTC	4 cut(s)	641, 682, 1265, 1806
Tru1I	TTAA	3 cut(s)	393, 594, 714
Tru9I	TTAA	3 cut(s)	393, 594, 714
TscAI	CASTG	6 cut(s)	361, 403, 885, 1969, 2115, 2140
TseFI	GTSAC	3 cut(s)	274, 935, 1894
Tsp45I	GTSAC	3 cut(s)	274, 935, 1894
TspRI	CASTG	6 cut(s)	361, 403, 885, 1969, 2115, 2140
Van91I	CCANNNNNTGG	1 cut(s)	1258
VpaK11BI	GGWCC	1 cut(s)	361
XapI	RAATTY	2 cut(s)	1739, 1937
XceI	RCATGY	5 cut(s)	823, 943, 1080, 1495, 2199
XmiI	GTMKAC	1 cut(s)	816
XmnI	GAANNNNTTC	1 cut(s)	1810
XspI	CTAG	5 cut(s)	1089, 1451, 1691, 2003, 2215
ZrmI	AGTACT	2 cut(s)	43, 1234
Zsp2I	ATGCAT	2 cut(s)	1078, 1726

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.