Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0000273

Physical Location & Seq

Genomic Coordinates Forward (+)

82822680 .. 82825886

Gene Structure 3207 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG525200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2244 bp

ATGGGGAAGAAGGAAGGAGGAGAAGGAGAAGAGAGTAGTAGTAGTACTACTACTACTACTACTCTTCCATTGTTTGAGAGCAAAACAGCAAGATTTAGAGGTGTTTATAGGGTTTTTGCCTCAACTATATTTGTGGGTGTGTGTTTGATATGGGTGTACAGACTAATAAACATCCCGAAAGCTGGAGAGAGAGGGAGATGGGCGTGGATTGGTATGCTCATGGCTGAGTTCTTGTTTGGTTTGTATTGGATCATCACTCAGTCTGTTCGCTGGAGTGTCACTTATCGTCAACCTCTCAAGAATAGACTCTCACAGAGATATGAGGAGAAGTTGCCGGGTGTTGATGTTTTTATATGCACTGCGGACCCGAAAATGGAGCCGCCAAGTTTGGTGATTAACACTGTGTTATCAGTCCTGTCCTGCAATTTTCCATCTGAGAAGTTGAGTGTTTATCTCTCGGATGATGGCGGTTCACAGTTTACTTTCTATGCTCTTTTGGAGGCGTCTCGGTTCTCGAAGTATTGGATACCCTTTTGCAAGAAGTTCAAGGTTGAACCAAGGGCACCGGAGGCTTACTTTACCCTGCATTCTGACGTTAATGACACCAAATATGGTCCAGAATGGTTTGATACCAAGAAACTTTATGAAGAAATGAAAAATCGGATCGATTCTGTTGTTGAAAGTGGGAAGATACCAGAAGAAACAAGGAATCAACACAAAGGGTTCTCGGAATGGAACCTTAAAGTAGCAAAGAATGATCATCACTCAATTGTGCAGATTATAACTGATGGAAGAGACACAAATGCCGTGGACAACGATGGATGCCGATTACCAACTATTGTCTACATGTCAAGAGAAAAGAGACCCCAACAGCCACACAACTTCAAAGCTGGAGCCATGAATGCACTGCTGAGAGTGTCATCAGAGATAAGCAATGCACCCTTCATTCTCAACTTGGACTGTGACATGTACGCAAACAATGCAGATGCAATACAAGAGGCACTTTGTTTCTTCTTGGATGAAAAGACTGGCCACGAGACTGCTTATGTGCAACATCCGCAGTTCTACAACAATCTCACAAAGAATGATATTTATGGAAATGCATGCTTCGTAACTAGTGCGGTTGAACTGGCTGGGTTAGGTGGATATGGAGCGGCCTTGTATTGTGGCACCGGATGTTTCCATCGAAGAGAATGTCTCTGTGGAAAAAAGTATTCAAAGGGTTACACAGAAAAATGGAACATTGATGGCCAGGAGAGTACTATTGACAAAAGTATCCAAGAATTGGAGGAATCTACGAAACCTCTTATCGATTGTAGCTATGAAAAGGGCAGTCAATGGGGAAAAGAGATGGGACTGATATATGGATGCCCTGTCGAAGATATAGTTACTGGTTTGGCAATACAATGCAGGGGTTGGAAATCAGTTTATTACAATCCAGAAAGGCCTTCCTTTGTTGGTGTTGCTCCAAACACCCTAGAAATCGCACTTGTTCAACAAAAGAGGTGGTCTGAGGGCATGTTTCAGATATTTGTCTCCGAGTATTGCCCTTTCATATATGGACATGGGAAGATACACTTTGGTGCCCAAATGGGATATTGCCTCTACCTTCTATGGGCTCCAGTTTCATTCCCAACTTTGTATTATGCACTTGTTCCTCCTCTTTGCTTGCTCCATGGCATTCCCTTGTTCCCCAAGGTGTCAAGCCTATGGTTCCTAGCATTTGCTTATGTTTTTGTAGCAAAGAATGCATACAGCATAGTTGAATTTTTGATGTGTGGCGGTACACTCAAAGCATGGTGGAACCTACAAAGAATGTGGCTTATCCGACGAATCACTTCGTACTTCTTTGCCTTCTTCGACACCATAAAGAGGCAATTGGGGATATCTGAAACACACTTTGCCCTCACCGATAAGGTTGTCACCGAGGATGTGATAAAGAGGTACGAGCAGGAGGTTTTGGAATTTGGAAGCTCAAGCATTATGTACACTGTAATGGCAACATCGGCATTGCTGAACTTGGTGAGCCTAGTTTGGGGAACAAAGCGGGTTGTGATGGATTTAGAGTTGAAGGCCTTAGACCAGTTCATCAGTCAAGTTATTCTTTGTGGCATATTGGTTTTGATCAACATACCAGTGTATGAAGCTCTCTTCTTGCGCAGTGATAAGGGCCATATACCCTCCTCTGTCATGTACAAGTCTGTCTTTGTGCTCACGTTGGCATGCTTGATGCCTATATGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

747

Amino Acids

84.97

Weight (kDa)

7.13

Isoelectric Point (pI)

41.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	114 - 405	5.1e-89	Cellulose synthase
Cellulose_synt	PF03552	430 - 740	2.9e-42	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55850
fragaria_vesca	FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica	MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica	Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis	pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis	RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata	RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora	Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii	Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa	Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha	Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana	Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	782
Acc16I	TGCGCA	1 cut(s)	2159
AccB1I	GGYRCC	3 cut(s)	562, 1169, 1583
AccB7I	CCANNNNNTGG	1 cut(s)	1285
AccBSI	CCGCTC	1 cut(s)	1154
AccI	GTMKAC	1 cut(s)	843
AciI	CCGC	8 cut(s)	362, 380, 468, 1058, 1121, 1154, 1782, 2047
AclWI	GGATC	2 cut(s)	257, 671
AcoI	YGGCCR	2 cut(s)	1030, 1249
AcsI	RAATTY	2 cut(s)	1766, 1964
AcyI	GRCGYC	1 cut(s)	503
AfaI	GTAC	9 cut(s)	46, 158, 971, 1261, 1786, 1844, 1946, 1988, 2195
AfiI	CCNNNNNNNGG	6 cut(s)	182, 373, 1285, 1615, 1872, 2035
AflIII	ACRYGT	2 cut(s)	846, 966
AgsI	TTSAA	9 cut(s)	547, 554, 680, 886, 1127, 1218, 1496, 1766, 2071
AhlI	ACTAGT	1 cut(s)	1115
AjnI	CCWGG	1 cut(s)	1251
AleI	CACNNNNGTG	1 cut(s)	1581
AluBI	AGCT	5 cut(s)	182, 890, 1320, 1974, 2147
AluI	AGCT	5 cut(s)	182, 890, 1320, 1974, 2147
Alw21I	GWGCWC	1 cut(s)	2214
Alw26I	GTCTC	6 cut(s)	510, 789, 856, 1031, 1202, 1540
AlwI	GGATC	2 cut(s)	257, 671
AoxI	GGCC	6 cut(s)	1030, 1155, 1249, 1445, 2073, 2170
ApoI	RAATTY	2 cut(s)	1766, 1964
ArsI	GACNNNNNNTTYG	2 cut(s)	1180, 1212
Asp700I	GAANNNNTTC	1 cut(s)	1837
AspLEI	GCGC	1 cut(s)	2160
AspS9I	GGNCC	3 cut(s)	364, 614, 2170
AsuC2I	CCSGG	1 cut(s)	336
AsuHPI	GGTGA	4 cut(s)	403, 1900, 1915, 2035
AvaII	GGWCC	2 cut(s)	364, 614
BaeGI	GKGCMC	2 cut(s)	565, 1588
BaeI	ACNNNNGTAYC	2 cut(s)	1258, 1291
BalI	TGGCCA	2 cut(s)	1032, 1251
BanI	GGYRCC	3 cut(s)	562, 1169, 1583
BanII	GRGCYC	1 cut(s)	1621
BauI	CACGAG	1 cut(s)	1034
Bbv12I	GWGCWC	1 cut(s)	2214
BccI	CCATC	9 cut(s)	192, 439, 458, 782, 812, 1191, 1241, 1345, 2050
BceAI	ACGGC	1 cut(s)	791
BciT130I	CCWGG	1 cut(s)	1253
BciVI	GTATCC	2 cut(s)	519, 1286
BclI	TGATCA	2 cut(s)	757, 2124
BcnI	CCSGG	1 cut(s)	336
BcoDI	GTCTC	6 cut(s)	510, 789, 856, 1031, 1202, 1540
BcuI	ACTAGT	1 cut(s)	1115
BfaI	CTAG	5 cut(s)	1116, 1478, 1718, 2030, 2242
BfuI	GTATCC	2 cut(s)	519, 1286
BisI	GCNGC	2 cut(s)	380, 1155
BlsI	GCNGC	2 cut(s)	381, 1156
BmcAI	AGTACT	2 cut(s)	46, 1261
Bme1390I	CCNGG	2 cut(s)	336, 1253
Bme18I	GGWCC	2 cut(s)	364, 614
BmgT120I	GGNCC	3 cut(s)	364, 614, 2170
BmrFI	CCNGG	2 cut(s)	336, 1253
BmsI	GCATC	4 cut(s)	812, 976, 1358, 2220
BplI	GAGNNNNNCTC	2 cut(s)	1182, 1214
BpmI	CTGGAG	4 cut(s)	204, 292, 912, 1605
BpuEI	CTTGAG	2 cut(s)	281, 1960
BpuMI	CCSGG	1 cut(s)	336
Bsa29I	ATCGAT	2 cut(s)	666, 1311
BsaHI	GRCGYC	1 cut(s)	503
BsaI	GGTCTC	1 cut(s)	856
BsaJI	CCNNGG	5 cut(s)	557, 807, 1675, 1695, 1926
BsaWI	WCCGGW	2 cut(s)	565, 1172
Bsc4I	CCNNNNNNNGG	6 cut(s)	182, 373, 1285, 1615, 1872, 2035
Bse1I	ACTGG	6 cut(s)	1033, 1134, 1396, 1622, 2083, 2135
Bse3DI	GCAATG	2 cut(s)	940, 2009
BseBI	CCWGG	1 cut(s)	1253
BseCI	ATCGAT	2 cut(s)	666, 1311
BseDI	CCNNGG	5 cut(s)	557, 807, 1675, 1695, 1926
BseGI	GGATG	8 cut(s)	171, 466, 827, 1024, 1054, 1181, 1373, 1936
BseLI	CCNNNNNNNGG	6 cut(s)	182, 373, 1285, 1615, 1872, 2035
BseMI	GCAATG	2 cut(s)	940, 2009
BseMII	CTCAG	5 cut(s)	216, 272, 426, 902, 1503
BseNI	ACTGG	6 cut(s)	1033, 1134, 1396, 1622, 2083, 2135
BseRI	GAGGAG	4 cut(s)	33, 338, 1650, 2173
BseSI	GKGCMC	2 cut(s)	565, 1588
BseYI	CCCAGC	1 cut(s)	1133
BsgI	GTGCAG	1 cut(s)	794
BshFI	GGCC	6 cut(s)	1032, 1157, 1251, 1447, 2075, 2172
BshNI	GGYRCC	3 cut(s)	562, 1169, 1583
BshVI	ATCGAT	2 cut(s)	666, 1311
BsiHKAI	GWGCWC	1 cut(s)	2214
BsiSI	CCGG	3 cut(s)	335, 566, 1173
BslFI	GGGAC	1 cut(s)	1368
BslI	CCNNNNNNNGG	6 cut(s)	182, 373, 1285, 1615, 1872, 2035
BsmAI	GTCTC	6 cut(s)	510, 789, 856, 1031, 1202, 1540
BsmBI	CGTCTC	1 cut(s)	510
BsmFI	GGGAC	1 cut(s)	1368
BsmI	GAATGC	4 cut(s)	586, 907, 1680, 1753
BsnI	GGCC	6 cut(s)	1032, 1157, 1251, 1447, 2075, 2172
Bso31I	GGTCTC	1 cut(s)	856
Bsp1286I	GDGCHC	4 cut(s)	565, 1588, 1621, 2214
Bsp1407I	TGTACA	3 cut(s)	156, 1986, 2193
Bsp143I	GATC	4 cut(s)	249, 663, 757, 2124
Bsp19I	CCATGG	1 cut(s)	1675
BspACI	CCGC	8 cut(s)	362, 380, 468, 1058, 1121, 1154, 1782, 2047
BspANI	GGCC	6 cut(s)	1032, 1157, 1251, 1447, 2075, 2172
BspCNI	CTCAG	5 cut(s)	217, 271, 427, 903, 1504
BspDI	ATCGAT	2 cut(s)	666, 1311
BspPI	GGATC	2 cut(s)	257, 671
BspT107I	GGYRCC	3 cut(s)	562, 1169, 1583
BspTNI	GGTCTC	1 cut(s)	856
BsrBI	CCGCTC	1 cut(s)	1154
BsrDI	GCAATG	2 cut(s)	940, 2009
BsrGI	TGTACA	3 cut(s)	156, 1986, 2193
BsrI	ACTGG	6 cut(s)	1033, 1134, 1396, 1622, 2083, 2135
BssECI	CCNNGG	5 cut(s)	557, 807, 1675, 1695, 1926
BssMI	GATC	4 cut(s)	249, 663, 757, 2124
BssNI	GRCGYC	1 cut(s)	503
BssSI	CACGAG	1 cut(s)	1034
BssT1I	CCWWGG	3 cut(s)	557, 1675, 1695
Bst2BI	CACGAG	1 cut(s)	1034
Bst2UI	CCWGG	1 cut(s)	1253
Bst4CI	ACNGT	4 cut(s)	403, 477, 962, 1993
Bst6I	CTCTTC	5 cut(s)	24, 69, 787, 1183, 2156
BstACI	GRCGYC	1 cut(s)	503
BstAPI	GCANNNNNTGC	2 cut(s)	980, 1748
BstAUI	TGTACA	3 cut(s)	156, 1986, 2193
BstC8I	GCNNGC	3 cut(s)	1105, 1670, 2224
BstDEI	CTNAG	6 cut(s)	225, 258, 435, 911, 1512, 2077
BstDSI	CCRYGG	2 cut(s)	807, 1675
BstF5I	GGATG	8 cut(s)	171, 466, 827, 1024, 1054, 1181, 1373, 1936
BstHHI	GCGC	1 cut(s)	2160
BstKTI	GATC	4 cut(s)	252, 666, 760, 2127
BstMAI	GTCTC	6 cut(s)	510, 789, 856, 1031, 1202, 1540
BstMBI	GATC	4 cut(s)	249, 663, 757, 2124
BstMWI	GCNNNNNNNGC	6 cut(s)	569, 902, 980, 1057, 1748, 2006
BstNI	CCWGG	1 cut(s)	1253
BstNSI	RCATGY	5 cut(s)	850, 970, 1107, 1522, 2226
BstSCI	CCNGG	2 cut(s)	334, 1251
BstSLI	GKGCMC	2 cut(s)	565, 1588
Bsu15I	ATCGAT	2 cut(s)	666, 1311
BsuI	GTATCC	2 cut(s)	519, 1286
BsuRI	GGCC	6 cut(s)	1032, 1157, 1251, 1447, 2075, 2172
BsuTUI	ATCGAT	2 cut(s)	666, 1311
BtgI	CCRYGG	2 cut(s)	807, 1675
BtsCI	GGATG	8 cut(s)	171, 466, 827, 1024, 1054, 1181, 1373, 1936
BtsI	GCAGTG	3 cut(s)	357, 905, 2167
BtsIMutI	CAGTG	6 cut(s)	357, 399, 905, 1989, 2142, 2167
Cac8I	GCNNGC	3 cut(s)	1105, 1670, 2224
CfoI	GCGC	1 cut(s)	2160
Cfr13I	GGNCC	3 cut(s)	364, 614, 2170
ClaI	ATCGAT	2 cut(s)	666, 1311
CseI	GACGC	1 cut(s)	492
Csp6I	GTAC	9 cut(s)	45, 157, 970, 1260, 1785, 1843, 1945, 1987, 2194
CspCI	CAANNNNNGTGG	6 cut(s)	789, 824, 1487, 1522, 1799, 1834
CviQI	GTAC	9 cut(s)	45, 157, 970, 1260, 1785, 1843, 1945, 1987, 2194
DdeI	CTNAG	6 cut(s)	225, 258, 435, 911, 1512, 2077
DpnI	GATC	4 cut(s)	251, 665, 759, 2126
DpnII	GATC	4 cut(s)	249, 663, 757, 2124
EaeI	YGGCCR	2 cut(s)	1030, 1249
Eam1104I	CTCTTC	5 cut(s)	24, 69, 787, 1183, 2156
EarI	CTCTTC	5 cut(s)	24, 69, 787, 1183, 2156
Eco130I	CCWWGG	3 cut(s)	557, 1675, 1695
Eco147I	AGGCCT	2 cut(s)	1447, 2075
Eco24I	GRGCYC	1 cut(s)	1621
Eco31I	GGTCTC	1 cut(s)	856
Eco32I	GATATC	1 cut(s)	1887
Eco47I	GGWCC	2 cut(s)	364, 614
EcoRII	CCWGG	1 cut(s)	1251
EcoRV	GATATC	1 cut(s)	1887
EcoT14I	CCWWGG	3 cut(s)	557, 1675, 1695
EcoT22I	ATGCAT	2 cut(s)	1105, 1753
EcoT38I	GRGCYC	1 cut(s)	1621
ErhI	CCWWGG	3 cut(s)	557, 1675, 1695
Esp3I	CGTCTC	1 cut(s)	510
FalI	AAGNNNNNCTT	8 cut(s)	987, 1019, 1562, 1594, 2088, 2120, 2189, 2221
FaqI	GGGAC	1 cut(s)	1368
FauI	CCCGC	1 cut(s)	2040
FbaI	TGATCA	2 cut(s)	757, 2124
FblI	GTMKAC	1 cut(s)	843
Fnu4HI	GCNGC	2 cut(s)	380, 1155
FokI	GGATG	8 cut(s)	158, 473, 834, 1031, 1041, 1188, 1380, 1943
FriOI	GRGCYC	1 cut(s)	1621
Fsp4HI	GCNGC	2 cut(s)	380, 1155
FspBI	CTAG	5 cut(s)	1116, 1478, 1718, 2030, 2242
FspI	TGCGCA	1 cut(s)	2159
GlaI	GCGC	1 cut(s)	2159
GluI	GCNGC	2 cut(s)	380, 1155
GsaI	CCCAGC	1 cut(s)	1137
GsuI	CTGGAG	4 cut(s)	204, 292, 912, 1605
HaeIII	GGCC	6 cut(s)	1032, 1157, 1251, 1447, 2075, 2172
HapII	CCGG	3 cut(s)	335, 566, 1173
HgaI	GACGC	1 cut(s)	492
HhaI	GCGC	1 cut(s)	2160
Hin1I	GRCGYC	1 cut(s)	503
Hin6I	GCGC	1 cut(s)	2158
HinP1I	GCGC	1 cut(s)	2158
HincII	GTYRAC	1 cut(s)	290
HindII	GTYRAC	1 cut(s)	290
HinfI	GANTC	5 cut(s)	306, 668, 709, 1292, 1833
HpaII	CCGG	3 cut(s)	335, 566, 1173
HphI	GGTGA	4 cut(s)	403, 1900, 1915, 2035
Hpy166II	GTNNAC	8 cut(s)	157, 290, 473, 480, 811, 844, 1787, 1989
Hpy188III	TCNNGA	6 cut(s)	175, 298, 514, 617, 852, 1439
Hpy8I	GTNNAC	8 cut(s)	157, 290, 473, 480, 811, 844, 1787, 1989
Hpy99I	CGWCG	1 cut(s)	1833
HpyAV	CCTTC	8 cut(s)	4, 8, 17, 952, 1458, 1619, 1864, 2065
HpyCH4III	ACNGT	4 cut(s)	403, 477, 962, 1993
HpyCH4IV	ACGT	2 cut(s)	594, 2216
HpyF10VI	GCNNNNNNNGC	6 cut(s)	569, 902, 980, 1057, 1748, 2006
HpyF3I	CTNAG	6 cut(s)	225, 258, 435, 911, 1512, 2077
HpySE526I	ACGT	2 cut(s)	594, 2216
Hsp92I	GRCGYC	1 cut(s)	503
HspAI	GCGC	1 cut(s)	2158
Ksp22I	TGATCA	2 cut(s)	757, 2124
Kzo9I	GATC	4 cut(s)	249, 663, 757, 2124
LmnI	GCTCC	6 cut(s)	376, 893, 1151, 1471, 1624, 1677
LweI	GCATC	4 cut(s)	812, 976, 1358, 2220
MaeI	CTAG	5 cut(s)	1116, 1478, 1718, 2030, 2242
MaeII	ACGT	2 cut(s)	594, 2216
MaeIII	GTNAC	6 cut(s)	277, 962, 1111, 1223, 1387, 1921
MalI	GATC	4 cut(s)	251, 665, 759, 2126
MbiI	CCGCTC	1 cut(s)	1154
MboI	GATC	4 cut(s)	249, 663, 757, 2124
MfeI	CAATTG	2 cut(s)	768, 1877
MhlI	GDGCHC	4 cut(s)	565, 1588, 1621, 2214
MlsI	TGGCCA	2 cut(s)	1032, 1251
MluCI	AATT	6 cut(s)	424, 768, 1283, 1766, 1877, 1964
MluNI	TGGCCA	2 cut(s)	1032, 1251
MlyI	GAGTC	1 cut(s)	300
MmeI	TCCRAC	2 cut(s)	1397, 1852
Mox20I	TGGCCA	2 cut(s)	1032, 1251
Mph1103I	ATGCAT	2 cut(s)	1105, 1753
MroXI	GAANNNNTTC	1 cut(s)	1837
MscI	TGGCCA	2 cut(s)	1032, 1251
MseI	TTAA	3 cut(s)	396, 597, 741
MslI	CAYNNNNRTG	3 cut(s)	1581, 1994, 2135
Msp20I	TGGCCA	2 cut(s)	1032, 1251
MspI	CCGG	3 cut(s)	335, 566, 1173
MspR9I	CCNGG	2 cut(s)	336, 1253
MunI	CAATTG	2 cut(s)	768, 1877
Mva1269I	GAATGC	4 cut(s)	586, 907, 1680, 1753
MvaI	CCWGG	1 cut(s)	1253
MwoI	GCNNNNNNNGC	6 cut(s)	569, 902, 980, 1057, 1748, 2006
NciI	CCSGG	1 cut(s)	336
NcoI	CCATGG	1 cut(s)	1675
NdeII	GATC	4 cut(s)	249, 663, 757, 2124
NmuCI	GTSAC	3 cut(s)	277, 962, 1921
NsbI	TGCGCA	1 cut(s)	2159
NsiI	ATGCAT	2 cut(s)	1105, 1753
NspI	RCATGY	5 cut(s)	850, 970, 1107, 1522, 2226
OliI	CACNNNNGTG	1 cut(s)	1581
PaeI	GCATGC	2 cut(s)	1107, 2226
PceI	AGGCCT	2 cut(s)	1447, 2075
PciI	ACATGT	2 cut(s)	846, 966
PctI	GAATGC	4 cut(s)	586, 907, 1680, 1753
PdmI	GAANNNNTTC	1 cut(s)	1837
PfeI	GAWTC	4 cut(s)	668, 709, 1292, 1833
PflMI	CCANNNNNTGG	1 cut(s)	1285
PkrI	GCNGC	2 cut(s)	381, 1156
PleI	GAGTC	1 cut(s)	300
PpsI	GAGTC	1 cut(s)	300
PscI	ACATGT	2 cut(s)	846, 966
PsiI	TTATAA	1 cut(s)	782
Psp6I	CCWGG	1 cut(s)	1251
PspFI	CCCAGC	1 cut(s)	1133
PspGI	CCWGG	1 cut(s)	1251
PspPI	GGNCC	3 cut(s)	364, 614, 2170
RsaI	GTAC	9 cut(s)	46, 158, 971, 1261, 1786, 1844, 1946, 1988, 2195
RsaNI	GTAC	9 cut(s)	45, 157, 970, 1260, 1785, 1843, 1945, 1987, 2194
RseI	CAYNNNNRTG	3 cut(s)	1581, 1994, 2135
SaqAI	TTAA	3 cut(s)	396, 597, 741
SatI	GCNGC	2 cut(s)	380, 1155
Sau3AI	GATC	4 cut(s)	249, 663, 757, 2124
Sau96I	GGNCC	3 cut(s)	364, 614, 2170
ScaI	AGTACT	2 cut(s)	46, 1261
SchI	GAGTC	1 cut(s)	300
ScrFI	CCNGG	2 cut(s)	336, 1253
SduI	GDGCHC	4 cut(s)	565, 1588, 1621, 2214
SfaNI	GCATC	4 cut(s)	812, 976, 1358, 2220
SinI	GGWCC	2 cut(s)	364, 614
SmiMI	CAYNNNNRTG	3 cut(s)	1581, 1994, 2135
SmlI	CTYRAG	2 cut(s)	296, 1975
SmoI	CTYRAG	2 cut(s)	296, 1975
SpeI	ACTAGT	1 cut(s)	1115
SphI	GCATGC	2 cut(s)	1107, 2226
Sse9I	AATT	6 cut(s)	424, 768, 1283, 1766, 1877, 1964
SseBI	AGGCCT	2 cut(s)	1447, 2075
SsiI	CCGC	8 cut(s)	362, 380, 468, 1058, 1121, 1154, 1782, 2047
SspMI	CTAG	5 cut(s)	1116, 1478, 1718, 2030, 2242
StuI	AGGCCT	2 cut(s)	1447, 2075
StyD4I	CCNGG	2 cut(s)	334, 1251
StyI	CCWWGG	3 cut(s)	557, 1675, 1695
TaaI	ACNGT	4 cut(s)	403, 477, 962, 1993
TaiI	ACGT	2 cut(s)	597, 2219
TaqI	TCGA	6 cut(s)	515, 666, 1186, 1311, 1377, 1860
TasI	AATT	6 cut(s)	424, 768, 1283, 1766, 1877, 1964
TatI	WGTACW	5 cut(s)	44, 156, 1259, 1986, 2193
TauI	GCSGC	2 cut(s)	382, 1157
TfiI	GAWTC	4 cut(s)	668, 709, 1292, 1833
Tru1I	TTAA	3 cut(s)	396, 597, 741
Tru9I	TTAA	3 cut(s)	396, 597, 741
TscAI	CASTG	6 cut(s)	364, 406, 912, 1996, 2142, 2167
TseFI	GTSAC	3 cut(s)	277, 962, 1921
Tsp45I	GTSAC	3 cut(s)	277, 962, 1921
TspRI	CASTG	6 cut(s)	364, 406, 912, 1996, 2142, 2167
Van91I	CCANNNNNTGG	1 cut(s)	1285
VpaK11BI	GGWCC	2 cut(s)	364, 614
XapI	RAATTY	2 cut(s)	1766, 1964
XceI	RCATGY	5 cut(s)	850, 970, 1107, 1522, 2226
XmiI	GTMKAC	1 cut(s)	843
XmnI	GAANNNNTTC	1 cut(s)	1837
XspI	CTAG	5 cut(s)	1116, 1478, 1718, 2030, 2242
ZrmI	AGTACT	2 cut(s)	46, 1261
Zsp2I	ATGCAT	2 cut(s)	1105, 1753

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.