RchiOBHm_Chr5g0076921

emp24/gp25L/p24 family/GOLD

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000273
Physical Location & Seq
Forward (+)
82711756 .. 82714789
3034 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ35155

Sequence Viewer

Length: 2058 bp
ATGGGATTGTTGGGTGCTGAGTTATGGTTCGGGCTTTATTGGATCCTCACCCAATCCTGCCGATGGAACCTTACCTTTAGGCAAACTTTCAAGGATAGACTATCTCAGAGATTTGAGAATGAGTTGCCGGGAGTGGACATTTTTGTGACCACGGCAGACCCTATCATAGAGCCACCAATGATGGTCATGAACACCGTTCTGTCAGTCATGGCTTATGATTACCCAACCGAGAAGATCAGCGTGTATCTATCCGATGATGGTGGTTCCGAGCTTACATACTACGCACTCTTGGAGGCTGCTGAGTTTGCTAAGCAGTGGATACCATACTGCAAGAAATACAGTGTGGAGCCAAGGTCCCCAGTTGCTTACTTTGTCTCAATAGCTACTGATGCAGTTGGTGTTGATGATAAAAAGGCTAATGACTTGGCTGTCATTAAGAAATCATACAAGGACATGGAGACTAAAATCGAAAATGCAGTCAAATTAGGCCACATTCCAGAGAAAGTACGATCGAAACAGAAAGGCTTTTCTCAATGGGACTCACATTTGTCTAAACGTGATCATGACACCTATCTTCAAGTAGTAATTGATGGAAGAGACCCAAAGGCAATCGATGTTGAAGGACTTGTACTGCCAACTTTAGTGTATTTAGCTCGGGAGAAAAGACCACAGTATCACCATAACTTCAAAGCTGGCTCTATGAATGCATTGATTAGGGTTTCTTCAAATATTAGCAACGGGAAGGTCATTCTAAATGTAGACTGTGACATGTATTCAAACAATTCCATGGCCATAAGGGATGCACTTTGCTGCTTAATGGATGAAGAAAAAGGCCATGAAGTTGCATTCATACAATTCCCACAAAATTTTGAAAACCTCACCAAGAATGAATTATATATTTCATTCATGCGAACAATCAGCGAGGTGGAATTGCATGCTTTGGATGGTTTTGATGGCCCTTTTTACGTTGGAAGTGGATGCTTCCACAGAAGGGATACTCTTTGTGGAAGGAAGTTCACCAAGGGATGTAAGAGTGACATGAAATGGGAGATCAGTAGAAAAAGAGAAGAAACTACAATTCATGAATTGGAAGAAGATTCAAAAGTTCTTGCAAACTGTGCATACGAGCAAAACACTGAGTGGGGAAAAGAGATGGGTTTGAAATATGGTTGTGCAATTGAAGACGTGTTCACGGGGTTATCAATCCAATGCCGCGGTTGGAGATCGGTGTACTTGAACCCAACAAGGAAAGCTTTCTTAGGAGTAGCTCCAACGACATTGCTTCAGATGCTGGTGCAGCAAAAGAGATGGTCAGAAGGTAGTTTCCAGATTTTGCTTTCACGGCACAATCCTGCATTCTCTGATCAGATTAGCTTGGGCCAAAAACTTGGATACGCATATGTCGGGGCTTGGTCTATGAATTTCCTACCAACCCTATTTTACACAGTGATCCCTTCCCTTTACCTCCTTAAGGGCATTTCCTTATTTCCTCGGGTTTCAAGTCCATGGATCATACCATTTGCATATGTGATAATTGCCAAGTACACTGGGAGCTTTTTGGAGTTTCTATGGGCAGGTGGCTCAGCCTTAGGTTGGTGGAACGACCAACGAATGTGGCTATACAAAAGATCAAGCTCCTACATATTTTCCTTCATCGACACCATTTTGTACCTTTTGGGGTATTCTGATTCGGCTTTTGTAATAACAGCCAAGACGTCGGATGAAGATGAGTCGCAACGATATGAGAAAGAGATTATGGAATTCGGAGCCTCTTCTCCACTGTTTTCCGTATTGGCATCACTTGCAGTACTAAATTTGTATTGCTTTGCTGGTTTTGTGAAGGAAGCAATCAGTCTGGGATCAAAGGGCGGCATTGCAGAAGTTTACGATACAATGGCATTGCAAATTCTACTATGTGGGATTTTGATTCTCATCAACCTGCCTTTGTACCAAGCCCTTTATCTAAGGAAGGACAAGGGGAAGTTGCCAGGCTCCATAGCTTTGAAGTCGATGGCATTTGGTGTCTTTGGTTTAACATGTTTCAATTTTTCGTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cellulose_synt EMP24_GP25L

Protein Analysis

685

Amino Acids

77.74

Weight (kDa)

6.42

Isoelectric Point (pI)

39.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cellulose_synt PF03552 45 - 342 6.5e-91 Cellulose synthase
Cellulose_synt PF03552 358 - 609 3.3e-44 Cellulose synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000273)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G55850
fragaria_vesca FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1565
AasI GACNNNNNNGTC 1 cut(s) 428
AatII GACGTC 1 cut(s) 1718
Acc36I ACCTGC 2 cut(s) 1565, 1947
AccI GTMKAC 1 cut(s) 759
AccII CGCG 1 cut(s) 1215
AciI CCGC 3 cut(s) 1213, 1215, 1869
AclWI GGATC 5 cut(s) 37, 50, 1444, 1517, 1867
AcoI YGGCCR 1 cut(s) 789
AcsI RAATTY 5 cut(s) 865, 1420, 1760, 1813, 1905
AcuI CTGAAG 1 cut(s) 1268
AcyI GRCGYC 1 cut(s) 1715
AdeI CACNNNGTG 1 cut(s) 1140
AfaI GTAC 7 cut(s) 507, 630, 1232, 1544, 1670, 1809, 1949
AfiI CCNNNNNNNGG 4 cut(s) 63, 991, 1471, 1593
AflII CTTAAG 1 cut(s) 1469
AflIII ACRYGT 3 cut(s) 768, 1185, 2036
AjiI CACGTC 1 cut(s) 1186
AjnI CCWGG 1 cut(s) 1987
Alw26I GTCTC 3 cut(s) 379, 452, 591
AlwI GGATC 5 cut(s) 37, 50, 1444, 1517, 1867
AlwNI CAGNNNCTG 1 cut(s) 1291
Ama87I CYCGRG 2 cut(s) 654, 1491
AoxI GGCC 5 cut(s) 487, 789, 832, 955, 1378
ApeKI GCWGC 3 cut(s) 296, 810, 1297
ApoI RAATTY 5 cut(s) 865, 1420, 1760, 1813, 1905
ArsI GACNNNNNNTTYG 2 cut(s) 462, 494
Asp700I GAANNNNTTC 1 cut(s) 1253
AspS9I GGNCC 3 cut(s) 354, 956, 1378
AsuC2I CCSGG 1 cut(s) 129
AsuHPI GGTGA 4 cut(s) 40, 668, 871, 1009
AvaI CYCGRG 2 cut(s) 654, 1491
AvaII GGWCC 1 cut(s) 354
AxyI CCTNAGG 1 cut(s) 1588
BaeI ACNNNNGTAYC 2 cut(s) 656, 689
BalI TGGCCA 1 cut(s) 791
BamHI GGATCC 1 cut(s) 42
BarI GAAGNNNNNNTAC 2 cut(s) 612, 644
BbsI GAAGAC 1 cut(s) 1188
BbvI GCAGC 3 cut(s) 283, 797, 1309
BccI CCATC 9 cut(s) 57, 175, 251, 584, 938, 947, 1147, 1302, 2005
BceAI ACGGC 2 cut(s) 168, 1358
BciT130I CCWGG 1 cut(s) 1989
BciVI GTATCC 3 cut(s) 312, 988, 1385
BclI TGATCA 2 cut(s) 559, 1363
BcnI CCSGG 1 cut(s) 129
BcoDI GTCTC 3 cut(s) 379, 452, 591
BfrI CTTAAG 1 cut(s) 1469
BfuAI ACCTGC 2 cut(s) 1565, 1947
BfuI GTATCC 3 cut(s) 312, 988, 1385
BisI GCNGC 5 cut(s) 297, 811, 1213, 1298, 1870
BlpI GCTNAGC 2 cut(s) 309, 1582
BlsI GCNGC 5 cut(s) 298, 812, 1214, 1299, 1871
BmcAI AGTACT 1 cut(s) 1809
Bme1390I CCNGG 2 cut(s) 129, 1989
Bme18I GGWCC 1 cut(s) 354
BmeT110I CYCGRG 2 cut(s) 654, 1491
BmgBI CACGTC 1 cut(s) 1186
BmgT120I GGNCC 3 cut(s) 354, 956, 1378
BmiI GGNNCC 7 cut(s) 44, 68, 265, 348, 356, 1768, 1993
BmrFI CCNGG 2 cut(s) 129, 1989
BmrI ACTGGG 2 cut(s) 353, 1557
BmsI GCATC 5 cut(s) 379, 790, 968, 1278, 1805
BmuI ACTGGG 2 cut(s) 353, 1557
BpiI GAAGAC 1 cut(s) 1188
Bpu1102I GCTNAGC 2 cut(s) 309, 1582
BpuMI CCSGG 1 cut(s) 129
Bsa29I ATCGAT 1 cut(s) 612
BsaBI GATNNNNATC 1 cut(s) 1931
BsaHI GRCGYC 1 cut(s) 1715
BsaI GGTCTC 1 cut(s) 591
BsaJI CCNNGG 7 cut(s) 150, 350, 786, 1020, 1213, 1490, 1505
BsaXI ACNNNNNCTCC 2 cut(s) 338, 368
Bsc4I CCNNNNNNNGG 4 cut(s) 63, 991, 1471, 1593
Bse1I ACTGG 2 cut(s) 359, 1552
Bse21I CCTNAGG 1 cut(s) 1588
Bse3DI GCAATG 3 cut(s) 1277, 1872, 1898
Bse8I GATNNNNATC 1 cut(s) 1931
BseBI CCWGG 1 cut(s) 1989
BseCI ATCGAT 1 cut(s) 612
BseDI CCNNGG 7 cut(s) 150, 350, 786, 1020, 1213, 1490, 1505
BseGI GGATG 6 cut(s) 805, 826, 949, 983, 1031, 1726
BseJI GATNNNNATC 1 cut(s) 1931
BseLI CCNNNNNNNGG 4 cut(s) 63, 991, 1471, 1593
BseMI GCAATG 3 cut(s) 1277, 1872, 1898
BseMII CTCAG 5 cut(s) 9, 119, 291, 1128, 1596
BseNI ACTGG 2 cut(s) 359, 1552
BseXI GCAGC 3 cut(s) 283, 797, 1309
BsgI GTGCAG 1 cut(s) 1316
Bsh1236I CGCG 1 cut(s) 1215
Bsh1285I CGRYCG 1 cut(s) 512
BshFI GGCC 5 cut(s) 489, 791, 834, 957, 1380
BshVI ATCGAT 1 cut(s) 612
BsiEI CGRYCG 1 cut(s) 512
BsiHKCI CYCGRG 2 cut(s) 654, 1491
BsiSI CCGG 1 cut(s) 128
BslFI GGGAC 2 cut(s) 340, 551
BslI CCNNNNNNNGG 4 cut(s) 63, 991, 1471, 1593
BsmAI GTCTC 3 cut(s) 379, 452, 591
BsmFI GGGAC 2 cut(s) 340, 551
BsmI GAATGC 3 cut(s) 709, 845, 1355
BsnI GGCC 5 cut(s) 489, 791, 834, 957, 1380
Bso31I GGTCTC 1 cut(s) 591
BsoBI CYCGRG 2 cut(s) 654, 1491
Bsp1720I GCTNAGC 2 cut(s) 309, 1582
Bsp19I CCATGG 2 cut(s) 786, 1505
BspACI CCGC 3 cut(s) 1213, 1215, 1869
BspANI GGCC 5 cut(s) 489, 791, 834, 957, 1380
BspCNI CTCAG 5 cut(s) 10, 118, 292, 1129, 1595
BspDI ATCGAT 1 cut(s) 612
BspFNI CGCG 1 cut(s) 1215
BspHI TCATGA 3 cut(s) 186, 562, 1081
BspLI GGNNCC 7 cut(s) 44, 68, 265, 348, 356, 1768, 1993
BspMI ACCTGC 2 cut(s) 1565, 1947
BspPI GGATC 5 cut(s) 37, 50, 1444, 1517, 1867
BspTI CTTAAG 1 cut(s) 1469
BspTNI GGTCTC 1 cut(s) 591
BsrDI GCAATG 3 cut(s) 1277, 1872, 1898
BsrI ACTGG 2 cut(s) 359, 1552
BssECI CCNNGG 7 cut(s) 150, 350, 786, 1020, 1213, 1490, 1505
BssNI GRCGYC 1 cut(s) 1715
BssT1I CCWWGG 4 cut(s) 350, 786, 1020, 1505
Bst2UI CCWGG 1 cut(s) 1989
Bst4CI ACNGT 7 cut(s) 196, 341, 672, 764, 1118, 1447, 1782
Bst6I CTCTTC 2 cut(s) 589, 1777
BstACI GRCGYC 1 cut(s) 1715
BstAFI CTTAAG 1 cut(s) 1469
BstAPI GCANNNNNTGC 2 cut(s) 1118, 1802
BstC8I GCNNGC 2 cut(s) 694, 936
BstDEI CTNAG 9 cut(s) 18, 105, 300, 309, 1137, 1258, 1582, 1588, 1964
BstDSI CCRYGG 4 cut(s) 150, 786, 1213, 1505
BstENI CCTNNNNNAGG 1 cut(s) 1469
BstF5I GGATG 6 cut(s) 805, 826, 949, 983, 1031, 1726
BstFNI CGCG 1 cut(s) 1215
BstMAI GTCTC 3 cut(s) 379, 452, 591
BstMCI CGRYCG 1 cut(s) 512
BstMWI GCNNNNNNNGC 7 cut(s) 305, 389, 1118, 1288, 1297, 1342, 1802
BstNI CCWGG 1 cut(s) 1989
BstNSI RCATGY 3 cut(s) 772, 938, 2040
BstSCI CCNGG 2 cut(s) 127, 1987
BstUI CGCG 1 cut(s) 1215
BstV1I GCAGC 3 cut(s) 283, 797, 1309
BstV2I GAAGAC 1 cut(s) 1188
BstX2I RGATCY 1 cut(s) 42
BstXI CCANNNNNNTGG 1 cut(s) 1388
BstYI RGATCY 1 cut(s) 42
Bsu15I ATCGAT 1 cut(s) 612
Bsu36I CCTNAGG 1 cut(s) 1588
BsuI GTATCC 3 cut(s) 312, 988, 1385
BsuRI GGCC 5 cut(s) 489, 791, 834, 957, 1380
BsuTUI ATCGAT 1 cut(s) 612
BtgI CCRYGG 4 cut(s) 150, 786, 1213, 1505
BtrI CACGTC 1 cut(s) 1186
BtsCI GGATG 6 cut(s) 805, 826, 949, 983, 1031, 1726
BtsI GCAGTG 1 cut(s) 320
BtsIMutI CAGTG 6 cut(s) 320, 346, 1134, 1452, 1545, 1778
BveI ACCTGC 2 cut(s) 1565, 1947
Cac8I GCNNGC 2 cut(s) 694, 936
CaiI CAGNNNCTG 1 cut(s) 1291
CciI TCATGA 3 cut(s) 186, 562, 1081
Cfr13I GGNCC 3 cut(s) 354, 956, 1378
Cfr42I CCGCGG 1 cut(s) 1216
ClaI ATCGAT 1 cut(s) 612
Csp6I GTAC 7 cut(s) 506, 629, 1231, 1543, 1669, 1808, 1948
CspCI CAANNNNNGTGG 2 cut(s) 1595, 1630
CviQI GTAC 7 cut(s) 506, 629, 1231, 1543, 1669, 1808, 1948
DdeI CTNAG 9 cut(s) 18, 105, 300, 309, 1137, 1258, 1582, 1588, 1964
DraIII CACNNNGTG 1 cut(s) 1140
DrdI GACNNNNNNGTC 1 cut(s) 428
DseDI GACNNNNNNGTC 1 cut(s) 428
EaeI YGGCCR 1 cut(s) 789
Eam1104I CTCTTC 2 cut(s) 589, 1777
EarI CTCTTC 2 cut(s) 589, 1777
Eco130I CCWWGG 4 cut(s) 350, 786, 1020, 1505
Eco31I GGTCTC 1 cut(s) 591
Eco47I GGWCC 1 cut(s) 354
Eco57I CTGAAG 1 cut(s) 1268
Eco81I CCTNAGG 1 cut(s) 1588
Eco88I CYCGRG 2 cut(s) 654, 1491
EcoNI CCTNNNNNAGG 1 cut(s) 1469
EcoO109I RGGNCCY 1 cut(s) 354
EcoRI GAATTC 1 cut(s) 1760
EcoRII CCWGG 1 cut(s) 1987
EcoT14I CCWWGG 4 cut(s) 350, 786, 1020, 1505
EcoT22I ATGCAT 1 cut(s) 709
ErhI CCWWGG 4 cut(s) 350, 786, 1020, 1505
FalI AAGNNNNNCTT 2 cut(s) 1237, 1269
FaqI GGGAC 2 cut(s) 340, 551
FauNDI CATATG 2 cut(s) 1399, 1525
FbaI TGATCA 2 cut(s) 559, 1363
FblI GTMKAC 1 cut(s) 759
Fnu4HI GCNGC 5 cut(s) 297, 811, 1213, 1298, 1870
FokI GGATG 6 cut(s) 812, 833, 956, 990, 1038, 1733
Fsp4HI GCNGC 5 cut(s) 297, 811, 1213, 1298, 1870
GluI GCNGC 5 cut(s) 297, 811, 1213, 1298, 1870
HaeIII GGCC 5 cut(s) 489, 791, 834, 957, 1380
HapII CCGG 1 cut(s) 128
Hin1I GRCGYC 1 cut(s) 1715
HindIII AAGCTT 1 cut(s) 1251
HinfI GANTC 5 cut(s) 539, 1097, 1688, 1730, 1927
HpaII CCGG 1 cut(s) 128
HphI GGTGA 4 cut(s) 40, 668, 871, 1009
Hpy166II GTNNAC 7 cut(s) 136, 760, 1017, 1191, 1231, 1545, 1885
Hpy188III TCNNGA 6 cut(s) 187, 497, 563, 656, 1082, 1327
Hpy8I GTNNAC 7 cut(s) 136, 760, 1017, 1191, 1231, 1545, 1885
Hpy99I CGWCG 1 cut(s) 1720
HpyAV CCTTC 9 cut(s) 614, 736, 984, 1002, 1310, 1464, 1660, 1834, 1963
HpyCH4III ACNGT 7 cut(s) 196, 341, 672, 764, 1118, 1447, 1782
HpyCH4IV ACGT 4 cut(s) 556, 966, 1185, 1715
HpyF10VI GCNNNNNNNGC 7 cut(s) 305, 389, 1118, 1288, 1297, 1342, 1802
HpyF3I CTNAG 9 cut(s) 18, 105, 300, 309, 1137, 1258, 1582, 1588, 1964
HpySE526I ACGT 4 cut(s) 556, 966, 1185, 1715
Hsp92I GRCGYC 1 cut(s) 1715
Ksp22I TGATCA 2 cut(s) 559, 1363
KspI CCGCGG 1 cut(s) 1216
LmnI GCTCC 6 cut(s) 346, 1273, 1551, 1640, 1766, 1997
Lsp1109I GCAGC 3 cut(s) 283, 797, 1309
LweI GCATC 5 cut(s) 379, 790, 968, 1278, 1805
MaeII ACGT 4 cut(s) 556, 966, 1185, 1715
MaeIII GTNAC 3 cut(s) 145, 764, 1034
MfeI CAATTG 1 cut(s) 1176
MflI RGATCY 1 cut(s) 42
MlsI TGGCCA 1 cut(s) 791
MluNI TGGCCA 1 cut(s) 791
MlyI GAGTC 2 cut(s) 533, 1739
MmeI TCCRAC 4 cut(s) 949, 1199, 1295, 1698
MnlI CCTC 7 cut(s) 56, 286, 887, 916, 1475, 1500, 1780
Mox20I TGGCCA 1 cut(s) 791
Mph1103I ATGCAT 1 cut(s) 709
MroXI GAANNNNTTC 1 cut(s) 1253
MscI TGGCCA 1 cut(s) 791
MseI TTAA 4 cut(s) 435, 815, 1470, 2033
MslI CAYNNNNRTG 1 cut(s) 143
Msp20I TGGCCA 1 cut(s) 791
MspA1I CMGCKG 1 cut(s) 1215
MspCI CTTAAG 1 cut(s) 1469
MspI CCGG 1 cut(s) 128
MspR9I CCNGG 2 cut(s) 129, 1989
MunI CAATTG 1 cut(s) 1176
Mva1269I GAATGC 3 cut(s) 709, 845, 1355
MvaI CCWGG 1 cut(s) 1989
MvnI CGCG 1 cut(s) 1215
MwoI GCNNNNNNNGC 7 cut(s) 305, 389, 1118, 1288, 1297, 1342, 1802
NciI CCSGG 1 cut(s) 129
NcoI CCATGG 2 cut(s) 786, 1505
NdeI CATATG 2 cut(s) 1399, 1525
NlaIV GGNNCC 7 cut(s) 44, 68, 265, 348, 356, 1768, 1993
NmuCI GTSAC 3 cut(s) 145, 764, 1034
NsiI ATGCAT 1 cut(s) 709
NspI RCATGY 3 cut(s) 772, 938, 2040
PaeI GCATGC 1 cut(s) 938
PagI TCATGA 3 cut(s) 186, 562, 1081
PaqCI CACCTGC 1 cut(s) 1565
PciI ACATGT 2 cut(s) 768, 2036
PctI GAATGC 3 cut(s) 709, 845, 1355
PdmI GAANNNNTTC 1 cut(s) 1253
PfeI GAWTC 3 cut(s) 1097, 1688, 1927
PkrI GCNGC 5 cut(s) 298, 812, 1214, 1299, 1871
Ple19I CGATCG 1 cut(s) 512
PleI GAGTC 2 cut(s) 533, 1738
PpsI GAGTC 2 cut(s) 533, 1738
PpuMI RGGWCCY 1 cut(s) 354
PscI ACATGT 2 cut(s) 768, 2036
Psp5II RGGWCCY 1 cut(s) 354
Psp6I CCWGG 1 cut(s) 1987
PspGI CCWGG 1 cut(s) 1987
PspN4I GGNNCC 7 cut(s) 44, 68, 265, 348, 356, 1768, 1993
PspPI GGNCC 3 cut(s) 354, 956, 1378
PspPPI RGGWCCY 1 cut(s) 354
PstNI CAGNNNCTG 1 cut(s) 1291
PsuI RGATCY 1 cut(s) 42
PvuI CGATCG 1 cut(s) 512
RsaI GTAC 7 cut(s) 507, 630, 1232, 1544, 1670, 1809, 1949
RsaNI GTAC 7 cut(s) 506, 629, 1231, 1543, 1669, 1808, 1948
RseI CAYNNNNRTG 1 cut(s) 143
SacII CCGCGG 1 cut(s) 1216
SaqAI TTAA 4 cut(s) 435, 815, 1470, 2033
SatI GCNGC 5 cut(s) 297, 811, 1213, 1298, 1870
Sau96I GGNCC 3 cut(s) 354, 956, 1378
ScaI AGTACT 1 cut(s) 1809
SchI GAGTC 2 cut(s) 533, 1739
ScrFI CCNGG 2 cut(s) 129, 1989
SfaNI GCATC 5 cut(s) 379, 790, 968, 1278, 1805
Sfr303I CCGCGG 1 cut(s) 1216
SgrBI CCGCGG 1 cut(s) 1216
SinI GGWCC 1 cut(s) 354
SmiMI CAYNNNNRTG 1 cut(s) 143
SmlI CTYRAG 1 cut(s) 1469
SmoI CTYRAG 1 cut(s) 1469
SphI GCATGC 1 cut(s) 938
SsiI CCGC 3 cut(s) 1213, 1215, 1869
SspI AATATT 1 cut(s) 730
StyD4I CCNGG 2 cut(s) 127, 1987
StyI CCWWGG 4 cut(s) 350, 786, 1020, 1505
TaaI ACNGT 7 cut(s) 196, 341, 672, 764, 1118, 1447, 1782
TaiI ACGT 4 cut(s) 559, 969, 1188, 1718
TaqI TCGA 5 cut(s) 468, 512, 612, 1656, 2009
TatI WGTACW 4 cut(s) 628, 1230, 1542, 1807
TauI GCSGC 2 cut(s) 1215, 1872
TfiI GAWTC 3 cut(s) 1097, 1688, 1927
Tru1I TTAA 4 cut(s) 435, 815, 1470, 2033
Tru9I TTAA 4 cut(s) 435, 815, 1470, 2033
TscAI CASTG 6 cut(s) 320, 346, 1141, 1452, 1552, 1785
TseFI GTSAC 3 cut(s) 145, 764, 1034
TseI GCWGC 3 cut(s) 296, 810, 1297
Tsp45I GTSAC 3 cut(s) 145, 764, 1034
TspGWI ACGGA 1 cut(s) 1777
TspRI CASTG 6 cut(s) 320, 346, 1141, 1452, 1552, 1785
Vha464I CTTAAG 1 cut(s) 1469
VpaK11BI GGWCC 1 cut(s) 354
XagI CCTNNNNNAGG 1 cut(s) 1469
XapI RAATTY 5 cut(s) 865, 1420, 1760, 1813, 1905
XceI RCATGY 3 cut(s) 772, 938, 2040
XmiI GTMKAC 1 cut(s) 759
XmnI GAANNNNTTC 1 cut(s) 1253
ZraI GACGTC 1 cut(s) 1716
ZrmI AGTACT 1 cut(s) 1809
Zsp2I ATGCAT 1 cut(s) 709
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.