Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007021.1

Orthogroup ID

OG0000273

Physical Location & Seq

Genomic Coordinates Reverse (-)

29792 .. 35811

Gene Structure 6020 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007021.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2472 bp

atgggagaggaaagatatttaccactgtttgagacaacgagagcaaatggaagagtcctatacaggttatttgcagtgtctgtttttgttggtatatgtttgatatgggtatatagagtgactcacataccgacagctggagaagatggaagatttggttggatgtgtttgttcgctgctgagttatggttcagcttttactgggtcgtcactcaagccactcggtggagccgcatctacagacacaccttcaaggacaggctttctcaaagatatgagaaagaactgccgggggtggacatatttgtgtgcaccgcggatccaatcatagagccaccgatgatggtgatgaacaccgttttgtcggtcctggcttacgactacccaccggagaagctcagcgtgtatctctccgacgatggtggctcagaactaacatactatgctctactagaagctgctgagtttgctaagcactggataccacattgcaagaagtacagtgtggaaccaaggtcgccggctgcttatttcgtttcaacagcttctgatgcggttggtgatcaaagtcagaatcagaatcgagctggtgatgtggctctcattaagaaattatacgagaacatggagaataaaattgaaaatgcagtgaagctaggccgcatttcagaagaagtacgatcaaagcataaaggtttttctcagtggaactcatattcatcaaagctagaccatgataccattcttcaaatagtagttgatgggagaaacccaaatgcaagagatgttgaaggatgtatgttgccaactttggtgtatttggctcgggagaagagaccccagtaccaccataacttcaaagctggcgctatgaatgcactgattagggtatcatcgagcattagcaatgggaagttacttcttaatgtagattgtgatatgtattcgaacaactccatggccataagggatgcactttgcttctttatggatgaagaacaaggccatgagatcgcatatgtacagttcccacagaatttcgacaaccttactaagaatgaattatacgcttcattaaaagtaattaacgaggtggaagcccatggtctggataattattgggggatattatatattggaagtggatgctttcacagaagagaagttctttgtggcaatatattcagcaagcgttgtaggagtgaaatgaaatgggagggtaaaaaaggagaagaaattgtcattcatgacttggaagaaacttcaaagagtcttgcaagttgtgcatttgaagagaacactcagtggggaaaagagatgggtttgaaatatgggtgcccggttgaagatgtgataacggggttatcgatccaatgccgaggatggaaatcagtgtattgcaatccaacaaggaaagctttcttaggattaaatgcaaccacattgcttcagatacttgtgcagcataagagatggtctgaaggtaacctccagattatgctttcaaagtacagtgctgtatggtttgggcatggaaagattagtttaggccatcaacttggataccttcgctacaacttatgggctgctaactgctgggcaacactaatttactcgattctcccttcactttacctccttagaggcacatccttatttcctcagatttcaagccgatggatcataccatttgcatatgttataattgctaagaacattgggagctttctggagtatatgtggtgtggaggcacaatgttagattcagcatttgtaataacagccaaggtggtggatgaagatgtgtccgaacggtataagaaagagatcatggaatttggcggatcgtctccaatgtttaccatactggcaacactagcattgctcaacttgtactgctttgccgggtttgtgcaggcagcagtcgctggaacaattggctttgcagaagtttatgagacaatgtgcttgcagattcttctatgtggggttttgattgtcattaacctaccgttgtacgaagccctatacctaaggaaggacaaggggaagctgccaagctctgtagcagttaagtcaatggcatttgctggatttgcttcagtacaccaccggcctcccttgctagcacagcaggccaacactcgcctgcgccccccccccccccccctcgcacacctagcctacatcaccggcctccatctcgatccggcgacaacaacatccccgcgccagcacccatcgctgctgcagcaaccaagctggaaaactcgctcctgcccacccgacccgcctgcaccgatccctgcagcaccagaattcggcgaccagacctgcaccagctcctcacactccgaccagcaggctttttcgacccagacccgaccatctccggtgcatttcagacccagactggtcgaagaacgacgaacgagatttcggcgactcaagagcaatagccaccgtacctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

823

Amino Acids

93.21

Weight (kDa)

8.48

Isoelectric Point (pI)

44.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55850
fragaria_vesca	FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica	MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica	Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis	pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis	RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata	RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora	Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii	Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa	Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha	Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana	Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1703
Acc36I	ACCTGC	1 cut(s)	2342
AccB1I	GGYRCC	1 cut(s)	1335
AccB7I	CCANNNNNTGG	2 cut(s)	225, 1108
AccII	CGCG	2 cut(s)	317, 2230
AciI	CCGC	8 cut(s)	232, 315, 317, 554, 661, 1842, 2228, 2291
AclWI	GGATC	7 cut(s)	314, 327, 1363, 1688, 1852, 2201, 2296
AcoI	YGGCCR	1 cut(s)	960
AcsI	RAATTY	3 cut(s)	1036, 1835, 2318
AcuI	CTGAAG	3 cut(s)	1433, 1500, 2085
AdeI	CACNNNGTG	2 cut(s)	225, 1305
AfaI	GTAC	9 cut(s)	500, 678, 845, 1023, 1511, 1895, 2018, 2106, 2467
AfiI	CCNNNNNNNGG	5 cut(s)	137, 225, 1108, 2038, 2321
AjnI	CCWGG	1 cut(s)	369
AjuI	GAANNNNNNNTTGG	2 cut(s)	142, 174
Alw21I	GWGCWC	1 cut(s)	314
Alw26I	GTCTC	4 cut(s)	26, 829, 1854, 1952
Alw44I	GTGCAC	1 cut(s)	310
AlwI	GGATC	7 cut(s)	314, 327, 1363, 1688, 1852, 2201, 2296
AlwNI	CAGNNNCTG	3 cut(s)	80, 548, 1928
Ama87I	CYCGRG	1 cut(s)	825
AoxI	GGCC	7 cut(s)	658, 960, 1003, 1549, 2114, 2136, 2194
ApaLI	GTGCAC	1 cut(s)	310
ApoI	RAATTY	3 cut(s)	1036, 1835, 2318
Asp700I	GAANNNNTTC	1 cut(s)	1418
AspLEI	GCGC	3 cut(s)	869, 2154, 2232
AspS9I	GGNCC	1 cut(s)	367
AsuC2I	CCSGG	3 cut(s)	291, 1340, 1906
AsuHPI	GGTGA	4 cut(s)	358, 572, 602, 2182
AsuII	TTCGAA	1 cut(s)	947
AsuNHI	GCTAGC	1 cut(s)	2125
AvaI	CYCGRG	1 cut(s)	825
AvaII	GGWCC	1 cut(s)	367
AxyI	CCTNAGG	1 cut(s)	2033
BaeGI	GKGCMC	2 cut(s)	314, 1340
BaeI	ACNNNNGTAYC	2 cut(s)	827, 860
BalI	TGGCCA	1 cut(s)	962
BamHI	GGATCC	1 cut(s)	319
BanI	GGYRCC	1 cut(s)	1335
Bbv12I	GWGCWC	1 cut(s)	314
BcgI	CGANNNNNNTGC	2 cut(s)	2276, 2310
BciT130I	CCWGG	1 cut(s)	371
BciVI	GTATCC	2 cut(s)	474, 1556
BclI	TGATCA	1 cut(s)	562
BcnI	CCSGG	3 cut(s)	291, 1340, 1906
BcoDI	GTCTC	4 cut(s)	26, 829, 1854, 1952
BfaI	CTAG	7 cut(s)	452, 656, 728, 1877, 2126, 2180, 2470
BfmI	CTRYAG	4 cut(s)	238, 2064, 2249, 2307
BfoI	RGCGCY	1 cut(s)	870
BfuAI	ACCTGC	1 cut(s)	2342
BfuI	GTATCC	2 cut(s)	474, 1556
BlpI	GCTNAGC	2 cut(s)	398, 471
Bme1390I	CCNGG	4 cut(s)	291, 371, 1340, 1906
Bme18I	GGWCC	1 cut(s)	367
BmeT110I	CYCGRG	1 cut(s)	825
BmgT120I	GGNCC	1 cut(s)	367
BmiI	GGNNCC	4 cut(s)	230, 321, 510, 1337
BmrFI	CCNGG	4 cut(s)	291, 371, 1340, 1906
BmrI	ACTGGG	2 cut(s)	211, 835
BmsI	GCATC	4 cut(s)	243, 541, 961, 1136
BmtI	GCTAGC	1 cut(s)	2129
BmuI	ACTGGG	2 cut(s)	211, 835
BpmI	CTGGAG	3 cut(s)	159, 1475, 1751
Bpu1102I	GCTNAGC	2 cut(s)	398, 471
Bpu14I	TTCGAA	1 cut(s)	947
BpuEI	CTTGAG	2 cut(s)	198, 2432
BpuMI	CCSGG	3 cut(s)	291, 1340, 1906
Bsa29I	ATCGAT	1 cut(s)	1367
BsaBI	GATNNNNATC	1 cut(s)	1387
BsaI	GGTCTC	1 cut(s)	829
BsaJI	CCNNGG	7 cut(s)	290, 315, 512, 957, 1102, 1378, 1785
BsaWI	WCCGGW	2 cut(s)	388, 2392
BsaXI	ACNNNNNCTCC	4 cut(s)	1620, 1650, 1724, 1754
Bsc4I	CCNNNNNNNGG	5 cut(s)	137, 225, 1108, 2038, 2321
Bse118I	RCCGGY	3 cut(s)	520, 2112, 2192
Bse1I	ACTGG	5 cut(s)	206, 482, 841, 1872, 2418
Bse21I	CCTNAGG	1 cut(s)	2033
Bse3DI	GCAATG	4 cut(s)	487, 913, 1442, 1880
Bse8I	GATNNNNATC	1 cut(s)	1387
BseBI	CCWGG	1 cut(s)	371
BseCI	ATCGAT	1 cut(s)	1367
BseDI	CCNNGG	7 cut(s)	290, 315, 512, 957, 1102, 1378, 1785
BseGI	GGATG	9 cut(s)	168, 800, 976, 997, 1151, 1388, 1649, 1801, 2222
BseJI	GATNNNNATC	1 cut(s)	1387
BseLI	CCNNNNNNNGG	5 cut(s)	137, 225, 1108, 2038, 2321
BseMI	GCAATG	4 cut(s)	487, 913, 1442, 1880
BseMII	CTCAG	7 cut(s)	171, 412, 441, 453, 716, 1316, 1676
BseNI	ACTGG	5 cut(s)	206, 482, 841, 1872, 2418
BseRI	GAGGAG	1 cut(s)	2335
BseSI	GKGCMC	2 cut(s)	314, 1340
BseYI	CCCAGC	1 cut(s)	1596
BsgI	GTGCAG	4 cut(s)	1481, 1934, 2280, 2320
Bsh1236I	CGCG	2 cut(s)	317, 2230
BshFI	GGCC	7 cut(s)	660, 962, 1005, 1551, 2116, 2138, 2196
BshNI	GGYRCC	1 cut(s)	1335
BshVI	ATCGAT	1 cut(s)	1367
BsiHKAI	GWGCWC	1 cut(s)	314
BsiHKCI	CYCGRG	1 cut(s)	825
BsiSI	CCGG	9 cut(s)	290, 389, 521, 1340, 1905, 2113, 2193, 2210, 2393
BslI	CCNNNNNNNGG	5 cut(s)	137, 225, 1108, 2038, 2321
BsmAI	GTCTC	4 cut(s)	26, 829, 1854, 1952
BsmBI	CGTCTC	1 cut(s)	1854
BsmI	GAATGC	1 cut(s)	880
BsnI	GGCC	7 cut(s)	660, 962, 1005, 1551, 2116, 2138, 2196
Bso31I	GGTCTC	1 cut(s)	829
BsoBI	CYCGRG	1 cut(s)	825
Bsp119I	TTCGAA	1 cut(s)	947
Bsp1286I	GDGCHC	2 cut(s)	314, 1340
Bsp1407I	TGTACA	1 cut(s)	1021
Bsp1720I	GCTNAGC	2 cut(s)	398, 471
Bsp19I	CCATGG	2 cut(s)	957, 1102
BspACI	CCGC	8 cut(s)	232, 315, 317, 554, 661, 1842, 2228, 2291
BspANI	GGCC	7 cut(s)	660, 962, 1005, 1551, 2116, 2138, 2196
BspCNI	CTCAG	7 cut(s)	172, 411, 440, 454, 715, 1315, 1675
BspDI	ATCGAT	1 cut(s)	1367
BspFNI	CGCG	2 cut(s)	317, 2230
BspHI	TCATGA	1 cut(s)	1246
BspLI	GGNNCC	4 cut(s)	230, 321, 510, 1337
BspMAI	CTGCAG	2 cut(s)	2253, 2311
BspMI	ACCTGC	1 cut(s)	2342
BspOI	GCTAGC	1 cut(s)	2129
BspPI	GGATC	7 cut(s)	314, 327, 1363, 1688, 1852, 2201, 2296
BspT104I	TTCGAA	1 cut(s)	947
BspT107I	GGYRCC	1 cut(s)	1335
BspTNI	GGTCTC	1 cut(s)	829
BsrDI	GCAATG	4 cut(s)	487, 913, 1442, 1880
BsrFI	RCCGGY	3 cut(s)	520, 2112, 2192
BsrGI	TGTACA	1 cut(s)	1021
BsrI	ACTGG	5 cut(s)	206, 482, 841, 1872, 2418
BssAI	RCCGGY	3 cut(s)	520, 2112, 2192
BssECI	CCNNGG	7 cut(s)	290, 315, 512, 957, 1102, 1378, 1785
BssT1I	CCWWGG	4 cut(s)	512, 957, 1102, 1785
Bst2UI	CCWGG	1 cut(s)	371
Bst4CI	ACNGT	8 cut(s)	27, 358, 503, 1026, 1514, 1815, 2013, 2465
Bst6I	CTCTTC	4 cut(s)	46, 827, 1153, 1287
BstAPI	GCANNNNNTGC	1 cut(s)	1283
BstAUI	TGTACA	1 cut(s)	1021
BstBI	TTCGAA	1 cut(s)	947
BstDSI	CCRYGG	3 cut(s)	315, 957, 1102
BstEII	GGTNACC	1 cut(s)	1484
BstENI	CCTNNNNNAGG	1 cut(s)	2036
BstF5I	GGATG	9 cut(s)	168, 800, 976, 997, 1151, 1388, 1649, 1801, 2222
BstFNI	CGCG	2 cut(s)	317, 2230
BstH2I	RGCGCY	1 cut(s)	870
BstHHI	GCGC	3 cut(s)	869, 2154, 2232
BstMAI	GTCTC	4 cut(s)	26, 829, 1854, 1952
BstNI	CCWGG	1 cut(s)	371
BstPI	GGTNACC	1 cut(s)	1484
BstSCI	CCNGG	4 cut(s)	289, 369, 1338, 1904
BstSFI	CTRYAG	4 cut(s)	238, 2064, 2249, 2307
BstSLI	GKGCMC	2 cut(s)	314, 1340
BstUI	CGCG	2 cut(s)	317, 2230
BstX2I	RGATCY	1 cut(s)	319
BstXI	CCANNNNNNTGG	2 cut(s)	1559, 1792
BstYI	RGATCY	1 cut(s)	319
Bsu15I	ATCGAT	1 cut(s)	1367
Bsu36I	CCTNAGG	1 cut(s)	2033
BsuI	GTATCC	2 cut(s)	474, 1556
BsuRI	GGCC	7 cut(s)	660, 962, 1005, 1551, 2116, 2138, 2196
BsuTUI	ATCGAT	1 cut(s)	1367
BtgI	CCRYGG	3 cut(s)	315, 957, 1102
BtgZI	GCGATG	1 cut(s)	2226
BtsCI	GGATG	9 cut(s)	168, 800, 976, 997, 1151, 1388, 1649, 1801, 2222
BtsI	GCAGTG	2 cut(s)	81, 654
BveI	ACCTGC	1 cut(s)	2342
CaiI	CAGNNNCTG	3 cut(s)	80, 548, 1928
CciI	TCATGA	1 cut(s)	1246
CfoI	GCGC	3 cut(s)	869, 2154, 2232
Cfr10I	RCCGGY	3 cut(s)	520, 2112, 2192
Cfr13I	GGNCC	1 cut(s)	367
Cfr42I	CCGCGG	1 cut(s)	318
ClaI	ATCGAT	1 cut(s)	1367
Csp6I	GTAC	9 cut(s)	499, 677, 844, 1022, 1510, 1894, 2017, 2105, 2466
CviAII	CATG	8 cut(s)	625, 734, 958, 1007, 1103, 1247, 1532, 1831
CviQI	GTAC	9 cut(s)	499, 677, 844, 1022, 1510, 1894, 2017, 2105, 2466
DraIII	CACNNNGTG	2 cut(s)	225, 1305
EaeI	YGGCCR	1 cut(s)	960
Eam1104I	CTCTTC	4 cut(s)	46, 827, 1153, 1287
EarI	CTCTTC	4 cut(s)	46, 827, 1153, 1287
EciI	GGCGGA	1 cut(s)	1857
Eco130I	CCWWGG	4 cut(s)	512, 957, 1102, 1785
Eco31I	GGTCTC	1 cut(s)	829
Eco47I	GGWCC	1 cut(s)	367
Eco57I	CTGAAG	3 cut(s)	1433, 1500, 2085
Eco81I	CCTNAGG	1 cut(s)	2033
Eco88I	CYCGRG	1 cut(s)	825
Eco91I	GGTNACC	1 cut(s)	1484
EcoNI	CCTNNNNNAGG	1 cut(s)	2036
EcoO65I	GGTNACC	1 cut(s)	1484
EcoRI	GAATTC	1 cut(s)	2318
EcoRII	CCWGG	1 cut(s)	369
EcoT14I	CCWWGG	4 cut(s)	512, 957, 1102, 1785
ErhI	CCWWGG	4 cut(s)	512, 957, 1102, 1785
Esp3I	CGTCTC	1 cut(s)	1854
FaeI	CATG	8 cut(s)	628, 737, 961, 1010, 1106, 1250, 1535, 1834
FalI	AAGNNNNNCTT	2 cut(s)	1402, 1434
FatI	CATG	8 cut(s)	624, 733, 957, 1006, 1102, 1246, 1531, 1830
FauI	CCCGC	2 cut(s)	2235, 2298
FauNDI	CATATG	2 cut(s)	1018, 1696
FbaI	TGATCA	1 cut(s)	562
FokI	GGATG	9 cut(s)	175, 807, 983, 1004, 1158, 1395, 1636, 1808, 2209
FspBI	CTAG	7 cut(s)	452, 656, 728, 1877, 2126, 2180, 2470
GlaI	GCGC	3 cut(s)	868, 2153, 2231
GsaI	CCCAGC	1 cut(s)	1600
GsuI	CTGGAG	3 cut(s)	159, 1475, 1751
HaeII	RGCGCY	1 cut(s)	870
HaeIII	GGCC	7 cut(s)	660, 962, 1005, 1551, 2116, 2138, 2196
HapII	CCGG	9 cut(s)	290, 389, 521, 1340, 1905, 2113, 2193, 2210, 2393
HhaI	GCGC	3 cut(s)	869, 2154, 2232
Hin1II	CATG	8 cut(s)	628, 737, 961, 1010, 1106, 1250, 1535, 1834
Hin6I	GCGC	3 cut(s)	867, 2152, 2230
HinP1I	GCGC	3 cut(s)	867, 2152, 2230
HindIII	AAGCTT	1 cut(s)	1416
HinfI	GANTC	9 cut(s)	54, 121, 574, 580, 1270, 1618, 1763, 1975, 2445
HpaII	CCGG	9 cut(s)	290, 389, 521, 1340, 1905, 2113, 2193, 2210, 2393
HphI	GGTGA	4 cut(s)	358, 572, 602, 2182
Hpy166II	GTNNAC	4 cut(s)	298, 312, 1860, 2107
Hpy188III	TCNNGA	7 cut(s)	827, 1109, 1247, 1492, 1730, 2204, 2449
Hpy8I	GTNNAC	4 cut(s)	298, 312, 1860, 2107
Hpy99I	CGWCG	2 cut(s)	419, 2430
HpyAV	CCTTC	6 cut(s)	259, 785, 1475, 1577, 1635, 2032
HpyCH4III	ACNGT	8 cut(s)	27, 358, 503, 1026, 1514, 1815, 2013, 2465
Hsp92II	CATG	8 cut(s)	628, 737, 961, 1010, 1106, 1250, 1535, 1834
HspAI	GCGC	3 cut(s)	867, 2152, 2230
KroI	GCCGGC	1 cut(s)	520
KroNI	GCCGGC	1 cut(s)	522
Ksp22I	TGATCA	1 cut(s)	562
KspI	CCGCGG	1 cut(s)	318
LmnI	GCTCC	4 cut(s)	228, 1722, 2279, 2348
LweI	GCATC	4 cut(s)	243, 541, 961, 1136
MaeI	CTAG	7 cut(s)	452, 656, 728, 1877, 2126, 2180, 2470
MaeIII	GTNAC	4 cut(s)	118, 208, 915, 1484
MfeI	CAATTG	1 cut(s)	1935
MflI	RGATCY	1 cut(s)	319
MhlI	GDGCHC	2 cut(s)	314, 1340
MlsI	TGGCCA	1 cut(s)	962
MluNI	TGGCCA	1 cut(s)	962
MlyI	GAGTC	4 cut(s)	63, 115, 1279, 2439
MmeI	TCCRAC	4 cut(s)	140, 438, 1430, 2379
Mox20I	TGGCCA	1 cut(s)	962
MroNI	GCCGGC	1 cut(s)	520
MroXI	GAANNNNTTC	1 cut(s)	1418
MscI	TGGCCA	1 cut(s)	962
MseI	TTAA	7 cut(s)	606, 924, 1076, 1086, 1430, 2004, 2073
MslI	CAYNNNNRTG	1 cut(s)	305
Msp20I	TGGCCA	1 cut(s)	962
MspA1I	CMGCKG	2 cut(s)	137, 317
MspI	CCGG	9 cut(s)	290, 389, 521, 1340, 1905, 2113, 2193, 2210, 2393
MspR9I	CCNGG	4 cut(s)	291, 371, 1340, 1906
MunI	CAATTG	1 cut(s)	1935
Mva1269I	GAATGC	1 cut(s)	880
MvaI	CCWGG	1 cut(s)	371
MvnI	CGCG	2 cut(s)	317, 2230
NaeI	GCCGGC	1 cut(s)	522
NciI	CCSGG	3 cut(s)	291, 1340, 1906
NcoI	CCATGG	2 cut(s)	957, 1102
NdeI	CATATG	2 cut(s)	1018, 1696
NgoMIV	GCCGGC	1 cut(s)	520
NheI	GCTAGC	1 cut(s)	2125
NlaIII	CATG	8 cut(s)	628, 737, 961, 1010, 1106, 1250, 1535, 1834
NlaIV	GGNNCC	4 cut(s)	230, 321, 510, 1337
NmeAIII	GCCGAG	1 cut(s)	1403
NmuCI	GTSAC	2 cut(s)	118, 208
NspV	TTCGAA	1 cut(s)	947
PagI	TCATGA	1 cut(s)	1246
PcsI	WCGNNNNNNNCGW	1 cut(s)	1364
PctI	GAATGC	1 cut(s)	880
PdiI	GCCGGC	1 cut(s)	522
PdmI	GAANNNNTTC	1 cut(s)	1418
PfeI	GAWTC	5 cut(s)	574, 580, 1618, 1763, 1975
PflMI	CCANNNNNTGG	2 cut(s)	225, 1108
PleI	GAGTC	4 cut(s)	62, 115, 1278, 2439
PpsI	GAGTC	4 cut(s)	62, 115, 1278, 2439
PsiI	TTATAA	1 cut(s)	1703
Psp6I	CCWGG	1 cut(s)	369
PspEI	GGTNACC	1 cut(s)	1484
PspFI	CCCAGC	1 cut(s)	1596
PspGI	CCWGG	1 cut(s)	369
PspN4I	GGNNCC	4 cut(s)	230, 321, 510, 1337
PspPI	GGNCC	1 cut(s)	367
PstI	CTGCAG	2 cut(s)	2253, 2311
PstNI	CAGNNNCTG	3 cut(s)	80, 548, 1928
PsuI	RGATCY	1 cut(s)	319
PvuII	CAGCTG	1 cut(s)	137
RsaI	GTAC	9 cut(s)	500, 678, 845, 1023, 1511, 1895, 2018, 2106, 2467
RsaNI	GTAC	9 cut(s)	499, 677, 844, 1022, 1510, 1894, 2017, 2105, 2466
RseI	CAYNNNNRTG	1 cut(s)	305
SacII	CCGCGG	1 cut(s)	318
SaqAI	TTAA	7 cut(s)	606, 924, 1076, 1086, 1430, 2004, 2073
Sau96I	GGNCC	1 cut(s)	367
SchI	GAGTC	4 cut(s)	63, 115, 1279, 2439
ScrFI	CCNGG	4 cut(s)	291, 371, 1340, 1906
SduI	GDGCHC	2 cut(s)	314, 1340
SfaNI	GCATC	4 cut(s)	243, 541, 961, 1136
SfcI	CTRYAG	4 cut(s)	238, 2064, 2249, 2307
Sfr303I	CCGCGG	1 cut(s)	318
SfuI	TTCGAA	1 cut(s)	947
SgrBI	CCGCGG	1 cut(s)	318
SinI	GGWCC	1 cut(s)	367
SmiMI	CAYNNNNRTG	1 cut(s)	305
SmlI	CTYRAG	2 cut(s)	213, 2447
SmoI	CTYRAG	2 cut(s)	213, 2447
SsiI	CCGC	8 cut(s)	232, 315, 317, 554, 661, 1842, 2228, 2291
SspMI	CTAG	7 cut(s)	452, 656, 728, 1877, 2126, 2180, 2470
StyD4I	CCNGG	4 cut(s)	289, 369, 1338, 1904
StyI	CCWWGG	4 cut(s)	512, 957, 1102, 1785
TaaI	ACNGT	8 cut(s)	27, 358, 503, 1026, 1514, 1815, 2013, 2465
TaqI	TCGA	9 cut(s)	583, 896, 947, 1041, 1367, 1616, 2205, 2372, 2418
TaqII	GACCGA	1 cut(s)	355
TatI	WGTACW	5 cut(s)	498, 1021, 1509, 1893, 2104
TauI	GCSGC	2 cut(s)	234, 663
TfiI	GAWTC	5 cut(s)	574, 580, 1618, 1763, 1975
Tru1I	TTAA	7 cut(s)	606, 924, 1076, 1086, 1430, 2004, 2073
Tru9I	TTAA	7 cut(s)	606, 924, 1076, 1086, 1430, 2004, 2073
TseFI	GTSAC	2 cut(s)	118, 208
Tsp45I	GTSAC	2 cut(s)	118, 208
TspDTI	ATGAA	9 cut(s)	365, 708, 887, 1008, 1062, 1074, 1223, 1235, 1812
Van91I	CCANNNNNTGG	2 cut(s)	225, 1108
VneI	GTGCAC	1 cut(s)	310
VpaK11BI	GGWCC	1 cut(s)	367
XagI	CCTNNNNNAGG	1 cut(s)	2036
XapI	RAATTY	3 cut(s)	1036, 1835, 2318
XmnI	GAANNNNTTC	1 cut(s)	1418
XspI	CTAG	7 cut(s)	452, 656, 728, 1877, 2126, 2180, 2470

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.