Rh5CG548900

Belongs to the glycosyltransferase 2 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
76535657 .. 76539794
4138 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG548900.1

Sequence Viewer

Length: 2265 bp
ATGTCCCTGAGATATATACAGAGAAGCTCAGAAAGAGAGAAAGAGAGTAGAGATCGGAATTGGCTAGATATGGGGGAGCGAGGGGTCAGTTCACCATTGTTCGAGACGAAGAGGGCCAAGGGGATAGTTCTGTATAGGCTTTTTGCTGCGTCTATTTTCGTGGGTATATGTTTCATCTGGGTTTACAGGTTGAGTCATGTACCAAAAGCTGGAGAAGATGGAAGGTTTGGTTGGATGGGTCTGCTGGGTGCTGAGTTATGGTTCGGGTTTTACTGGCTCTTCACTCAAGCCTGCCGCTGGAACCGCGTGTATCGGCACACCTTCAGGGACAGGCTCTCGGAGAGATATGAGGATGAGTTGCCGGGAGTGGACATATTCGTGTGCACGGCAGACCCAACTATAGAGCCGCCGACGATGGTGATAAACACTGTTTTATCAGTAATGGCTTATGATTACCCACCGGAGAAGCTCAGCGTGTATCTATCCGATGATGGCGGATCCGAACTTACATGTTATGCTCTATTGGAAGCTGCTGAGTTTGCTAAGCATTGGATACCATATTGCAAGAAGTACAATGTGGAGCCAAGGTCACCTGCTGCTTATTTTGCCTCACTAGCTTCTGATAATGCAGGGGATTTCACTCTCATTAAGAAATTATACAAAGACATGGAGAATAAAATCGAAATTGCAGTGAAGTTAGGCAGCATTTCTGAAGAAGTACGATCAAAACACAGAGGCTTTTCTCAGTGGGATTCGTATTCATCTCCACGTGACCATGACACCATTCTACAAATAGTAATTGATGGGAGAGATCCAAATGCAAGAGATGTTAAAGGGTGTGGATTGCCAACCTTAGTGTATTTGGCTCGCGAGAAGAGACCCCAATATCACCATAACTTCAAAGCCGGAGCTATGAATGCACTGATTAGGGTATCTTCAAACATTAGCAATGGGAAGGTTATTCTTAATGTAGACTGTGATATGTATTCAAACAACTCTAAGGCCATAAGGGATGCACTCTGCTTCTTCCTGGATGAAGAAAAAGGCCAGGAGATTGCATTCGTACAGTTCCCACAGAATTTCGAAAATGTTACCAAGAATGAAGTATATAGTAGTACACTACGAATAATCAGTGAGGTGGAATTTCATGGTTTGGATGGTTATGGTGGCCCTTTATATATTGGAACTGGATGCTTCCACAGAAGAGATACTCTTTGTGGGAGGAAGTTCAGCAAAGGATATAAGAGTGAACTGAAGTGGGAGAATAGAAAAGGAGAAGAAACAAGCATTCCTAAATTGGAAGAAAGTTCAAAAAGTCTAGCAAGTTGTACATTTGAAGAGAACACTCAATGGGGAAAAGAGATGGGTTTGAAATATGGTTGTCCGGTTGAGGATGTTATAACAGGGTTATCCATCCAATGCCGTGGATGGAAATCAGTGTACTGCAATCCAACTAGGAAAGCTTTCTTAGGATTAGCTCCAACTACACTGCCTCAGACACTTTTGCAGCACAAGAGATGGTCAGAAGGTGATTTCCAGATTTTGGTTTCTAAGTATAGCCCTGCATTGTATGGGCATGGAAAGATTAGTTTAGGCCTTCAACTTGGATATTGCTGCTACTGCCTGTGGGCTCCAAATTGCTTGGCGACACTATTTTACTCAATTCTCCCTTCAATTTACCTTCTTAGAGGCATTTCTGTATTCCCACAGATCTCAAGTCCGTGGTTCATACCATTTGCGTATGTGATAATTGCCAAGTACACTTGGAGCTTTGGGGAGTTTTTGTGGTCTGGTGGCACAATCTTGGGATGGTGGAACGACCAACGAATATGGCTATACAAAAGAACAAGCTCCTACCTATTTGCCTTCATCGATACCATTTTGTACTGTCTAGGGTATTCGGATTCAGCGTTTGTAATAACAGCCAAGGTGGCCGATGAAGATGTGTCACAACGATACGAGAAAGAGATCATGGACTTCGGAGCCTCATCTCCAATGTTCGTCATATTAGCAACAGTTGCATTACTCAATTTGTACTGCTTTGCTGGGTTTCTCAAGGAAGCGATCACTAGAAAAGGCATTGTTGGAGTTTATGAGACAATGGCTTTGCAAATTCTTCTATGTGGTGTTTTAATTGTCATCAACCTGCCTTTGTACCAAGCTCTTTACTTGAGGAAAGACAGTGGAAAAATGCCAAGTTCTGTGGTATTTAAATCGATGGCATTTGTTGCATTTTCTTGTGTATGTACTAAATTCTTGTATTAA

Protein Analysis

754

Amino Acids

85.9

Weight (kDa)

8.26

Isoelectric Point (pI)

42.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cellulose_synt PF03552 123 - 412 7.8e-90 Cellulose synthase
Cellulose_synt PF03552 437 - 739 4.3e-43 Cellulose synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000273)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G55850
fragaria_vesca FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1400
AarI CACCTGC 1 cut(s) 601
Acc36I ACCTGC 2 cut(s) 601, 2154
AccB7I CCANNNNNTGG 2 cut(s) 209, 1543
AccI GTMKAC 1 cut(s) 972
AccII CGCG 2 cut(s) 306, 870
AciI CCGC 4 cut(s) 295, 304, 407, 495
AclWI GGATC 3 cut(s) 492, 505, 806
AcoI YGGCCR 1 cut(s) 1932
AcsI RAATTY 4 cut(s) 1078, 1142, 2112, 2252
AcuI CTGAAG 3 cut(s) 307, 732, 1274
AcvI CACGTG 1 cut(s) 770
AfiI CCNNNNNNNGG 3 cut(s) 209, 297, 1543
AflIII ACRYGT 1 cut(s) 509
AgsI TTSAA 8 cut(s) 901, 939, 990, 1311, 1337, 1372, 1601, 1674
AjnI CCWGG 2 cut(s) 1029, 1047
AjuI GAANNNNNNNTTGG 2 cut(s) 214, 246
Alw21I GWGCWC 1 cut(s) 386
Alw26I GTCTC 3 cut(s) 98, 871, 2090
Alw44I GTGCAC 1 cut(s) 382
AlwI GGATC 3 cut(s) 492, 505, 806
AoxI GGCC 6 cut(s) 114, 1002, 1045, 1168, 1594, 1932
ApaLI GTGCAC 1 cut(s) 382
ApeKI GCWGC 6 cut(s) 146, 530, 596, 702, 1507, 1614
ApoI RAATTY 4 cut(s) 1078, 1142, 2112, 2252
ArsI GACNNNNNNTTYG 2 cut(s) 2089, 2121
Asp700I GAANNNNTTC 1 cut(s) 1463
AspS9I GGNCC 2 cut(s) 114, 1169
AsuC2I CCSGG 1 cut(s) 363
AsuHPI GGTGA 5 cut(s) 84, 430, 582, 881, 1541
AsuII TTCGAA 1 cut(s) 1083
BaeGI GKGCMC 1 cut(s) 386
BamHI GGATCC 1 cut(s) 497
BanII GRGCYC 1 cut(s) 1633
BbrPI CACGTG 1 cut(s) 770
Bbv12I GWGCWC 1 cut(s) 386
BbvI GCAGC 6 cut(s) 133, 517, 583, 714, 1519, 1601
BceAI ACGGC 2 cut(s) 402, 1407
BciT130I CCWGG 2 cut(s) 1031, 1049
BciVI GTATCC 1 cut(s) 546
BcnI CCSGG 1 cut(s) 363
BcoDI GTCTC 3 cut(s) 98, 871, 2090
BfaI CTAG 6 cut(s) 65, 614, 1319, 1455, 1892, 2070
BfmI CTRYAG 1 cut(s) 399
BfuAI ACCTGC 2 cut(s) 601, 2154
BfuI GTATCC 1 cut(s) 546
BglI GCCNNNNNGGC 1 cut(s) 1931
BglII AGATCT 1 cut(s) 1710
BisI GCNGC 8 cut(s) 147, 295, 407, 531, 597, 703, 1508, 1615
BlpI GCTNAGC 2 cut(s) 470, 543
BlsI GCNGC 8 cut(s) 148, 296, 408, 532, 598, 704, 1509, 1616
Bme1390I CCNGG 3 cut(s) 363, 1031, 1049
BmgT120I GGNCC 2 cut(s) 114, 1169
BmiI GGNNCC 5 cut(s) 302, 499, 582, 1632, 1984
BmrFI CCNGG 3 cut(s) 363, 1031, 1049
BmsI GCATC 2 cut(s) 1003, 1181
BpmI CTGGAG 1 cut(s) 231
Bpu1102I GCTNAGC 2 cut(s) 470, 543
Bpu14I TTCGAA 1 cut(s) 1083
BpuEI CTTGAG 4 cut(s) 270, 1699, 2039, 2191
BpuMI CCSGG 1 cut(s) 363
Bsa29I ATCGAT 2 cut(s) 1872, 2216
BsaAI YACGTR 1 cut(s) 770
BsaBI GATNNNNATC 1 cut(s) 1432
BsaI GGTCTC 1 cut(s) 871
BsaJI CCNNGG 5 cut(s) 117, 584, 1423, 1721, 1926
BsaWI WCCGGW 2 cut(s) 460, 1384
BsaXI ACNNNNNCTCC 4 cut(s) 572, 602, 1769, 1799
Bsc4I CCNNNNNNNGG 3 cut(s) 209, 297, 1543
Bse1I ACTGG 2 cut(s) 278, 1192
Bse3DI GCAATG 1 cut(s) 955
Bse8I GATNNNNATC 1 cut(s) 1432
BseBI CCWGG 2 cut(s) 1031, 1049
BseCI ATCGAT 2 cut(s) 1872, 2216
BseDI CCNNGG 5 cut(s) 117, 584, 1423, 1721, 1926
BseJI GATNNNNATC 1 cut(s) 1432
BseLI CCNNNNNNNGG 3 cut(s) 209, 297, 1543
BseMI GCAATG 1 cut(s) 955
BseMII CTCAG 6 cut(s) 42, 243, 484, 525, 758, 1508
BseNI ACTGG 2 cut(s) 278, 1192
BseSI GKGCMC 1 cut(s) 386
BseXI GCAGC 6 cut(s) 133, 517, 583, 714, 1519, 1601
BseYI CCCAGC 2 cut(s) 244, 2045
Bsh1236I CGCG 2 cut(s) 306, 870
BshFI GGCC 6 cut(s) 116, 1004, 1047, 1170, 1596, 1934
BshVI ATCGAT 2 cut(s) 1872, 2216
BsiHKAI GWGCWC 1 cut(s) 386
BsiSI CCGG 4 cut(s) 362, 461, 906, 1385
BslFI GGGAC 1 cut(s) 341
BslI CCNNNNNNNGG 3 cut(s) 209, 297, 1543
BsmAI GTCTC 3 cut(s) 98, 871, 2090
BsmBI CGTCTC 1 cut(s) 98
BsmFI GGGAC 1 cut(s) 341
BsmI GAATGC 3 cut(s) 922, 1058, 1287
BsnI GGCC 6 cut(s) 116, 1004, 1047, 1170, 1596, 1934
Bso31I GGTCTC 1 cut(s) 871
Bsp119I TTCGAA 1 cut(s) 1083
Bsp1286I GDGCHC 2 cut(s) 386, 1633
Bsp1407I TGTACA 1 cut(s) 1328
Bsp143I GATC 7 cut(s) 52, 497, 722, 811, 1710, 1968, 2064
Bsp1720I GCTNAGC 2 cut(s) 470, 543
Bsp68I TCGCGA 1 cut(s) 870
BspACI CCGC 4 cut(s) 295, 304, 407, 495
BspANI GGCC 6 cut(s) 116, 1004, 1047, 1170, 1596, 1934
BspCNI CTCAG 6 cut(s) 41, 244, 483, 526, 757, 1507
BspDI ATCGAT 2 cut(s) 1872, 2216
BspFNI CGCG 2 cut(s) 306, 870
BspLI GGNNCC 5 cut(s) 302, 499, 582, 1632, 1984
BspMI ACCTGC 2 cut(s) 601, 2154
BspPI GGATC 3 cut(s) 492, 505, 806
BspQI GCTCTTC 1 cut(s) 284
BspT104I TTCGAA 1 cut(s) 1083
BspTNI GGTCTC 1 cut(s) 871
BsrDI GCAATG 1 cut(s) 955
BsrGI TGTACA 1 cut(s) 1328
BsrI ACTGG 2 cut(s) 278, 1192
BssECI CCNNGG 5 cut(s) 117, 584, 1423, 1721, 1926
BssMI GATC 7 cut(s) 52, 497, 722, 811, 1710, 1968, 2064
BssT1I CCWWGG 3 cut(s) 117, 584, 1926
Bst2UI CCWGG 2 cut(s) 1031, 1049
Bst4CI ACNGT 6 cut(s) 430, 977, 1068, 1889, 2017, 2183
Bst6I CTCTTC 5 cut(s) 104, 284, 869, 1198, 1332
BstAPI GCANNNNNTGC 2 cut(s) 2018, 2228
BstAUI TGTACA 1 cut(s) 1328
BstBAI YACGTR 1 cut(s) 770
BstBI TTCGAA 1 cut(s) 1083
BstC8I GCNNGC 2 cut(s) 292, 868
BstDSI CCRYGG 2 cut(s) 1423, 1721
BstEII GGTNACC 1 cut(s) 588
BstFNI CGCG 2 cut(s) 306, 870
BstKTI GATC 7 cut(s) 55, 500, 725, 814, 1713, 1971, 2067
BstMAI GTCTC 3 cut(s) 98, 871, 2090
BstMBI GATC 7 cut(s) 52, 497, 722, 811, 1710, 1968, 2064
BstMWI GCNNNNNNNGC 9 cut(s) 303, 539, 605, 614, 917, 1620, 1931, 2018, 2228
BstNI CCWGG 2 cut(s) 1031, 1049
BstNSI RCATGY 1 cut(s) 513
BstPI GGTNACC 1 cut(s) 588
BstSCI CCNGG 3 cut(s) 361, 1029, 1047
BstSFI CTRYAG 1 cut(s) 399
BstSLI GKGCMC 1 cut(s) 386
BstUI CGCG 2 cut(s) 306, 870
BstV1I GCAGC 6 cut(s) 133, 517, 583, 714, 1519, 1601
BstX2I RGATCY 3 cut(s) 497, 811, 1710
BstXI CCANNNNNNTGG 1 cut(s) 1424
BstYI RGATCY 3 cut(s) 497, 811, 1710
Bsu15I ATCGAT 2 cut(s) 1872, 2216
BsuI GTATCC 1 cut(s) 546
BsuRI GGCC 6 cut(s) 116, 1004, 1047, 1170, 1596, 1934
BsuTUI ATCGAT 2 cut(s) 1872, 2216
BtgI CCRYGG 2 cut(s) 1423, 1721
BtsI GCAGTG 2 cut(s) 696, 1487
BtsIMutI CAGTG 8 cut(s) 426, 696, 752, 920, 1138, 1443, 1487, 2188
BtuMI TCGCGA 1 cut(s) 870
BveI ACCTGC 2 cut(s) 601, 2154
Cac8I GCNNGC 2 cut(s) 292, 868
Cfr13I GGNCC 2 cut(s) 114, 1169
ClaI ATCGAT 2 cut(s) 1872, 2216
CseI GACGC 1 cut(s) 138
CspCI CAANNNNNGTGG 2 cut(s) 2184, 2219
CviAII CATG 7 cut(s) 197, 510, 667, 776, 1148, 1577, 1972
DpnI GATC 7 cut(s) 54, 499, 724, 813, 1712, 1970, 2066
DpnII GATC 7 cut(s) 52, 497, 722, 811, 1710, 1968, 2064
DraI TTTAAA 1 cut(s) 2212
EaeI YGGCCR 1 cut(s) 1932
Eam1104I CTCTTC 5 cut(s) 104, 284, 869, 1198, 1332
EarI CTCTTC 5 cut(s) 104, 284, 869, 1198, 1332
EciI GGCGGA 1 cut(s) 510
Eco130I CCWWGG 3 cut(s) 117, 584, 1926
Eco147I AGGCCT 1 cut(s) 1596
Eco24I GRGCYC 1 cut(s) 1633
Eco31I GGTCTC 1 cut(s) 871
Eco57I CTGAAG 3 cut(s) 307, 732, 1274
Eco72I CACGTG 1 cut(s) 770
Eco91I GGTNACC 1 cut(s) 588
EcoO65I GGTNACC 1 cut(s) 588
EcoRII CCWGG 2 cut(s) 1029, 1047
EcoT14I CCWWGG 3 cut(s) 117, 584, 1926
EcoT38I GRGCYC 1 cut(s) 1633
ErhI CCWWGG 3 cut(s) 117, 584, 1926
Esp3I CGTCTC 1 cut(s) 98
FaeI CATG 7 cut(s) 200, 513, 670, 779, 1151, 1580, 1975
FaqI GGGAC 1 cut(s) 341
FatI CATG 7 cut(s) 196, 509, 666, 775, 1147, 1576, 1971
FblI GTMKAC 1 cut(s) 972
Fnu4HI GCNGC 8 cut(s) 147, 295, 407, 531, 597, 703, 1508, 1615
FriOI GRGCYC 1 cut(s) 1633
Fsp4HI GCNGC 8 cut(s) 147, 295, 407, 531, 597, 703, 1508, 1615
FspBI CTAG 6 cut(s) 65, 614, 1319, 1455, 1892, 2070
GluI GCNGC 8 cut(s) 147, 295, 407, 531, 597, 703, 1508, 1615
GsaI CCCAGC 2 cut(s) 248, 2049
GsuI CTGGAG 1 cut(s) 231
HaeIII GGCC 6 cut(s) 116, 1004, 1047, 1170, 1596, 1934
HapII CCGG 4 cut(s) 362, 461, 906, 1385
HgaI GACGC 1 cut(s) 138
Hin1II CATG 7 cut(s) 200, 513, 670, 779, 1151, 1580, 1975
HindIII AAGCTT 1 cut(s) 1461
HinfI GANTC 3 cut(s) 193, 752, 1904
HpaII CCGG 4 cut(s) 362, 461, 906, 1385
HphI GGTGA 5 cut(s) 84, 430, 582, 881, 1541
Hpy166II GTNNAC 9 cut(s) 92, 184, 370, 384, 973, 1118, 1250, 1441, 1761
Hpy188III TCNNGA 3 cut(s) 103, 869, 1537
Hpy8I GTNNAC 9 cut(s) 92, 184, 370, 384, 973, 1118, 1250, 1441, 1761
Hpy99I CGWCG 1 cut(s) 415
HpyAV CCTTC 8 cut(s) 216, 331, 949, 1520, 1607, 1680, 1691, 1876
HpyCH4III ACNGT 6 cut(s) 430, 977, 1068, 1889, 2017, 2183
HpyCH4IV ACGT 1 cut(s) 769
HpyF10VI GCNNNNNNNGC 9 cut(s) 303, 539, 605, 614, 917, 1620, 1931, 2018, 2228
HpySE526I ACGT 1 cut(s) 769
Hsp92II CATG 7 cut(s) 200, 513, 670, 779, 1151, 1580, 1975
Kzo9I GATC 7 cut(s) 52, 497, 722, 811, 1710, 1968, 2064
LguI GCTCTTC 1 cut(s) 284
LmnI GCTCC 8 cut(s) 76, 580, 908, 1483, 1636, 1767, 1856, 1982
Lsp1109I GCAGC 6 cut(s) 133, 517, 583, 714, 1519, 1601
LweI GCATC 2 cut(s) 1003, 1181
MaeI CTAG 6 cut(s) 65, 614, 1319, 1455, 1892, 2070
MaeII ACGT 1 cut(s) 769
MaeIII GTNAC 4 cut(s) 588, 770, 1090, 1947
MalI GATC 7 cut(s) 54, 499, 724, 813, 1712, 1970, 2066
MboI GATC 7 cut(s) 52, 497, 722, 811, 1710, 1968, 2064
MflI RGATCY 3 cut(s) 497, 811, 1710
MhlI GDGCHC 2 cut(s) 386, 1633
MlyI GAGTC 1 cut(s) 202
MmeI TCCRAC 4 cut(s) 212, 1475, 1505, 2065
MroXI GAANNNNTTC 1 cut(s) 1463
MseI TTAA 6 cut(s) 648, 831, 966, 2132, 2211, 2263
MslI CAYNNNNRTG 1 cut(s) 377
MspA1I CMGCKG 1 cut(s) 297
MspI CCGG 4 cut(s) 362, 461, 906, 1385
MspR9I CCNGG 3 cut(s) 363, 1031, 1049
Mva1269I GAATGC 3 cut(s) 922, 1058, 1287
MvaI CCWGG 2 cut(s) 1031, 1049
MvnI CGCG 2 cut(s) 306, 870
MwoI GCNNNNNNNGC 9 cut(s) 303, 539, 605, 614, 917, 1620, 1931, 2018, 2228
NciI CCSGG 1 cut(s) 363
NdeII GATC 7 cut(s) 52, 497, 722, 811, 1710, 1968, 2064
NlaIII CATG 7 cut(s) 200, 513, 670, 779, 1151, 1580, 1975
NlaIV GGNNCC 5 cut(s) 302, 499, 582, 1632, 1984
NmuCI GTSAC 3 cut(s) 588, 770, 1947
NruI TCGCGA 1 cut(s) 870
NspI RCATGY 1 cut(s) 513
NspV TTCGAA 1 cut(s) 1083
PaqCI CACCTGC 1 cut(s) 601
PceI AGGCCT 1 cut(s) 1596
PciI ACATGT 1 cut(s) 509
PciSI GCTCTTC 1 cut(s) 284
PcsI WCGNNNNNNNCGW 1 cut(s) 1907
PctI GAATGC 3 cut(s) 922, 1058, 1287
PdmI GAANNNNTTC 1 cut(s) 1463
PfeI GAWTC 2 cut(s) 752, 1904
PflMI CCANNNNNTGG 2 cut(s) 209, 1543
PfoI TCCNGGA 1 cut(s) 1029
PkrI GCNGC 8 cut(s) 148, 296, 408, 532, 598, 704, 1509, 1616
PleI GAGTC 1 cut(s) 201
PmaCI CACGTG 1 cut(s) 770
PmlI CACGTG 1 cut(s) 770
PpsI GAGTC 1 cut(s) 201
Ppu21I YACGTR 1 cut(s) 770
PscI ACATGT 1 cut(s) 509
PsiI TTATAA 1 cut(s) 1400
Psp6I CCWGG 2 cut(s) 1029, 1047
PspCI CACGTG 1 cut(s) 770
PspEI GGTNACC 1 cut(s) 588
PspFI CCCAGC 2 cut(s) 244, 2045
PspGI CCWGG 2 cut(s) 1029, 1047
PspN4I GGNNCC 5 cut(s) 302, 499, 582, 1632, 1984
PspPI GGNCC 2 cut(s) 114, 1169
PsuI RGATCY 3 cut(s) 497, 811, 1710
RruI TCGCGA 1 cut(s) 870
RseI CAYNNNNRTG 1 cut(s) 377
SapI GCTCTTC 1 cut(s) 284
SaqAI TTAA 6 cut(s) 648, 831, 966, 2132, 2211, 2263
SatI GCNGC 8 cut(s) 147, 295, 407, 531, 597, 703, 1508, 1615
Sau3AI GATC 7 cut(s) 52, 497, 722, 811, 1710, 1968, 2064
Sau96I GGNCC 2 cut(s) 114, 1169
SchI GAGTC 1 cut(s) 202
ScrFI CCNGG 3 cut(s) 363, 1031, 1049
SduI GDGCHC 2 cut(s) 386, 1633
SfaNI GCATC 2 cut(s) 1003, 1181
SfcI CTRYAG 1 cut(s) 399
SfuI TTCGAA 1 cut(s) 1083
SmiI ATTTAAAT 1 cut(s) 2212
SmiMI CAYNNNNRTG 1 cut(s) 377
SmlI CTYRAG 4 cut(s) 285, 1714, 2054, 2170
SmoI CTYRAG 4 cut(s) 285, 1714, 2054, 2170
SseBI AGGCCT 1 cut(s) 1596
SsiI CCGC 4 cut(s) 295, 304, 407, 495
SspMI CTAG 6 cut(s) 65, 614, 1319, 1455, 1892, 2070
StuI AGGCCT 1 cut(s) 1596
StyD4I CCNGG 3 cut(s) 361, 1029, 1047
StyI CCWWGG 3 cut(s) 117, 584, 1926
SwaI ATTTAAAT 1 cut(s) 2212
TaaI ACNGT 6 cut(s) 430, 977, 1068, 1889, 2017, 2183
TaiI ACGT 1 cut(s) 772
TaqI TCGA 5 cut(s) 102, 681, 1083, 1872, 2216
TatI WGTACW 8 cut(s) 570, 1115, 1328, 1440, 1758, 1884, 2034, 2246
TauI GCSGC 2 cut(s) 297, 409
TfiI GAWTC 2 cut(s) 752, 1904
Tru1I TTAA 6 cut(s) 648, 831, 966, 2132, 2211, 2263
Tru9I TTAA 6 cut(s) 648, 831, 966, 2132, 2211, 2263
TscAI CASTG 8 cut(s) 433, 696, 752, 927, 1138, 1443, 1494, 2188
TseFI GTSAC 3 cut(s) 588, 770, 1947
TseI GCWGC 6 cut(s) 146, 530, 596, 702, 1507, 1614
Tsp45I GTSAC 3 cut(s) 588, 770, 1947
TspDTI ATGAA 9 cut(s) 163, 750, 929, 1050, 1116, 1136, 1717, 1858, 1953
TspGWI ACGGA 1 cut(s) 1710
TspRI CASTG 8 cut(s) 433, 696, 752, 927, 1138, 1443, 1494, 2188
Van91I CCANNNNNTGG 2 cut(s) 209, 1543
VneI GTGCAC 1 cut(s) 382
XapI RAATTY 4 cut(s) 1078, 1142, 2112, 2252
XceI RCATGY 1 cut(s) 513
XmiI GTMKAC 1 cut(s) 972
XmnI GAANNNNTTC 1 cut(s) 1463
XspI CTAG 6 cut(s) 65, 614, 1319, 1455, 1892, 2070
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.