Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0000273

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG549300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2223 bp

ATGGGAGAGGAAAGATATTTACCACTGTTTGAGACAACGAGAGCAAATGGAAGAGTCCTATACAGGTTATTTGCAGTGTCTGTTTTTGTTGGTATATGTTTGATATGGGTATATAGAGTGACTCACATACCGAAAGCTGGAGAAGATGGAAGATTTGGTTGGATGTGTTTGTTCGCTGCTGAGTTATGGTTCAGCTTTTACTGGGTCGTCACTCAAGCCACTCGGTGGAGCCGCATCTACAGACACACCTTCAAGGACAGGCTTTCTCAAAGATATGAGAAAGAACTGCCGGGGGTGGACATATTTGTGTGCACCGCGGATCCAATCATAGAGCCACCGATGATGGTGATGAACACCGTTTTGTCGGTCCTGGCTTACGACTACCCACCGGAGAAGCTCAGCGTGTATCTCTCCGACGATGGTGGCTCAGAACTAACATACTATGCTCTACTAGAAGCTGCTGAGTTTGCTAAGCACTGGATACCACATTGCAAGAAGTACAGTGTGGAACCAAGGTCGCCGGCTGCTTATTTCGTTTCAACAGCTTCTGATGCGGTTGGTGATCAAAGTCAGAATCAGAATCGAGCTGGTGATGTGGCTCTCATTAAGAAATTATACGAGAACATGGAGAATAAAATTGAAAATGCAGTGAAGCTAGGCCGCATTTCAGAAGAAGTACGATCAAAGCATAAAGGTTTTTCTCAGTGGAACTCATATTCATCAAAGCTAGACCATGATACCATTCTTCAAATAGTAGTTGATGGGAGAAACCCAAATGCAAGAGATGTTGAAGGATGTATGTTGCCAACTTTGGTGTATTTGGCTCGGGAGAAGAGACCCCAGTACCACCATAACTTCAAAGCTGGCGCTATGAATGCACTGATTAGGGTATCGTCAAATATAAGCAATGGGAAGTTGATTCTTAATGTAGACTGTGACATGTATTCAAACAACTCGAAGGCCATAAGGGATGCACTCTGCTTCTTAATGGACGAAGAACAAGGCCATGAGATTGCATACGTACAGTTCCCGCAGAATTTCGATAACCTAACCAAGAATGAATTATACGCTTCATTACGAGTATATTTCGAGGTGGAATTCCATGGCCTGGATAATTATTGGGGGACACCATATATTGGAAGTGGATGCTTTCACAGAAGAGAAACTCTTTGTGGGAAGAAATTCAGCAAGGTAAATAAGAGTGAGATGAAATGGGAGGACAAAAAAGGTGAAGAAATTGGCATTCATGAATTAGAAGAAAGTTCAAAAAGTCTTGCGAGTTGTACATTTGAAGAGAACACACAATGGGGAAAGGAGATGGGTTTGAAATATGGGTGTCCGGTTGAAGATGTGATAACGGCGTTATTGATCCAATGCCGAGGATGGAAATCAGTGTATTGCAATCCAACAAGGAAAGCTTTCTTAGGATTAGCTCCTACCACATTGCTTCAGGCACTTGTGCAGCATAAGAGATGGTCGGAAGGCCACCTTCAGATTACGCTGTCTAAGTACAGTGTTGTATGGTATGGCCGTGGAAAGATTGGTTTAGGCCATCAACTTGGATACCTTCGCTACAACTTATGGGCTGCTAATTGCTGGGCAACACTAATTTACTCAACTCTTCCTTCACTTTACCTCCTTAGAGGCACGTCCTTATTTCCTCAGATTTCAAGCCGATGGATTATACCATTTGCATATGTTATAATTGCTAAGAACATTGGGAGCTTTGTGGAGTATCTATGGTGTGGAGGCACGAGCTTAGGTTGGTGGAACGACCAACGTATGTGGCTTTACGAGAGAACAACCTCATACTTATTTGCCTTCATCGACACCATTGTACACTACCTCGGATACACAGATTCAGCATTTGTAATAACAGCCAAGGTGGCCGATGAAGACGTGTCCGAACGATATGAGAAAGAAATCATGGAATTCGGGGGCTCGTCTCCAATGTTTACCGTGCTGGCAACACTTGCATTGCTCAATTTGTACTGCTTTGGCTGGTTTCTGAAGGCAGCAATCACTGGAACAAAGGGTGTTGCAGAGGTTTATGAGACAATGTCCTTGCAGATTCTTCTATGTGTGGTTTTGATTGTCATTAACCTACCGTTGTACGAAGCCCTATACCTAAGAAAGGACAAGGGGAAGCTGCCGAGCTCTGTAGCATTTAAGTCGATGGCATTTGCTGGATTTGCTTGCATATGTTTTAAATTTCTATGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

740

Amino Acids

84.65

Weight (kDa)

7.73

Isoelectric Point (pI)

37.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	99 - 402	2.3e-93	Cellulose synthase
Cellulose_synt	PF03552	423 - 712	9.7e-40	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0000273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55850
fragaria_vesca	FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica	MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica	Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis	pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis	RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata	RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora	Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii	Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa	Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha	Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana	Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1703
AccB7I	CCANNNNNTGG	3 cut(s)	225, 1108, 1136
AccI	GTMKAC	1 cut(s)	930
AccII	CGCG	1 cut(s)	317
AciI	CCGC	6 cut(s)	232, 315, 317, 554, 661, 1031
AclWI	GGATC	3 cut(s)	314, 327, 1363
AcoI	YGGCCR	2 cut(s)	1528, 1887
AcsI	RAATTY	5 cut(s)	1036, 1097, 1181, 1931, 2210
AcuI	CTGAAG	3 cut(s)	1433, 1475, 2030
AdeI	CACNNNGTG	1 cut(s)	225
AfaI	GTAC	9 cut(s)	500, 678, 845, 1023, 1285, 1511, 1839, 1991, 2114
AfiI	CCNNNNNNNGG	5 cut(s)	137, 225, 1108, 1136, 2134
AflIII	ACRYGT	2 cut(s)	939, 1899
AjiI	CACGTC	2 cut(s)	1650, 1900
AjnI	CCWGG	2 cut(s)	369, 1107
AjuI	GAANNNNNNNTTGG	2 cut(s)	142, 174
Alw21I	GWGCWC	2 cut(s)	314, 2159
Alw26I	GTCTC	4 cut(s)	26, 829, 1950, 2048
Alw44I	GTGCAC	1 cut(s)	310
AlwI	GGATC	3 cut(s)	314, 327, 1363
AlwNI	CAGNNNCTG	2 cut(s)	80, 548
Ama87I	CYCGRG	1 cut(s)	825
AoxI	GGCC	8 cut(s)	658, 960, 1003, 1105, 1483, 1528, 1549, 1887
ApaLI	GTGCAC	1 cut(s)	310
ApeKI	GCWGC	7 cut(s)	176, 458, 524, 1462, 1586, 2015, 2149
ApoI	RAATTY	5 cut(s)	1036, 1097, 1181, 1931, 2210
Asp700I	GAANNNNTTC	2 cut(s)	1181, 1418
AspLEI	GCGC	1 cut(s)	869
AspS9I	GGNCC	1 cut(s)	367
AsuC2I	CCSGG	1 cut(s)	291
AsuHPI	GGTGA	4 cut(s)	358, 572, 602, 1241
AvaI	CYCGRG	1 cut(s)	825
AvaII	GGWCC	1 cut(s)	367
BaeGI	GKGCMC	1 cut(s)	314
BaeI	ACNNNNGTAYC	2 cut(s)	827, 860
BamHI	GGATCC	1 cut(s)	319
BanII	GRGCYC	2 cut(s)	1943, 2159
BauI	CACGAG	1 cut(s)	1753
BbsI	GAAGAC	1 cut(s)	1902
Bbv12I	GWGCWC	2 cut(s)	314, 2159
BbvI	GCAGC	7 cut(s)	163, 445, 511, 1474, 1573, 2027, 2136
BceAI	ACGGC	2 cut(s)	1374, 1515
BcgI	CGANNNNNNTGC	2 cut(s)	2154, 2188
BciT130I	CCWGG	2 cut(s)	371, 1109
BciVI	GTATCC	3 cut(s)	474, 1556, 1844
BclI	TGATCA	1 cut(s)	562
BcnI	CCSGG	1 cut(s)	291
BcoDI	GTCTC	4 cut(s)	26, 829, 1950, 2048
BfaI	CTAG	3 cut(s)	452, 656, 728
BfmI	CTRYAG	2 cut(s)	238, 2160
BfoI	RGCGCY	1 cut(s)	870
BfuI	GTATCC	3 cut(s)	474, 1556, 1844
BglI	GCCNNNNNGGC	1 cut(s)	1886
BisI	GCNGC	9 cut(s)	177, 232, 459, 525, 661, 1463, 1587, 2016, 2150
BlpI	GCTNAGC	2 cut(s)	398, 471
BlsI	GCNGC	9 cut(s)	178, 233, 460, 526, 662, 1464, 1588, 2017, 2151
Bme1390I	CCNGG	3 cut(s)	291, 371, 1109
Bme18I	GGWCC	1 cut(s)	367
BmeT110I	CYCGRG	1 cut(s)	825
BmgBI	CACGTC	2 cut(s)	1650, 1900
BmgT120I	GGNCC	1 cut(s)	367
BmiI	GGNNCC	3 cut(s)	230, 321, 510
BmrFI	CCNGG	3 cut(s)	291, 371, 1109
BmrI	ACTGGG	2 cut(s)	211, 835
BmsI	GCATC	4 cut(s)	243, 541, 961, 1136
BmuI	ACTGGG	2 cut(s)	211, 835
BpiI	GAAGAC	1 cut(s)	1902
BpmI	CTGGAG	1 cut(s)	159
Bpu10I	CCTNAGC	1 cut(s)	1759
Bpu1102I	GCTNAGC	2 cut(s)	398, 471
BpuEI	CTTGAG	1 cut(s)	198
BpuMI	CCSGG	1 cut(s)	291
BsaAI	YACGTR	1 cut(s)	1021
BsaBI	GATNNNNATC	1 cut(s)	1387
BsaI	GGTCTC	1 cut(s)	829
BsaJI	CCNNGG	8 cut(s)	290, 315, 512, 1102, 1378, 1531, 1846, 1881
BsaWI	WCCGGW	2 cut(s)	388, 1339
BsaXI	ACNNNNNCTCC	2 cut(s)	1620, 1650
Bsc4I	CCNNNNNNNGG	5 cut(s)	137, 225, 1108, 1136, 2134
Bse118I	RCCGGY	1 cut(s)	520
Bse1I	ACTGG	4 cut(s)	206, 482, 841, 2029
Bse3DI	GCAATG	4 cut(s)	487, 913, 1442, 1976
Bse8I	GATNNNNATC	1 cut(s)	1387
BseBI	CCWGG	2 cut(s)	371, 1109
BseDI	CCNNGG	8 cut(s)	290, 315, 512, 1102, 1378, 1531, 1846, 1881
BseGI	GGATG	5 cut(s)	168, 800, 976, 1151, 1388
BseJI	GATNNNNATC	1 cut(s)	1387
BseLI	CCNNNNNNNGG	5 cut(s)	137, 225, 1108, 1136, 2134
BseMI	GCAATG	4 cut(s)	487, 913, 1442, 1976
BseMII	CTCAG	6 cut(s)	171, 412, 441, 453, 716, 1676
BseNI	ACTGG	4 cut(s)	206, 482, 841, 2029
BseSI	GKGCMC	1 cut(s)	314
BseXI	GCAGC	7 cut(s)	163, 445, 511, 1474, 1573, 2027, 2136
BseYI	CCCAGC	1 cut(s)	1596
BsgI	GTGCAG	1 cut(s)	1481
Bsh1236I	CGCG	1 cut(s)	317
BshFI	GGCC	8 cut(s)	660, 962, 1005, 1107, 1485, 1530, 1551, 1889
BsiHKAI	GWGCWC	2 cut(s)	314, 2159
BsiHKCI	CYCGRG	1 cut(s)	825
BsiSI	CCGG	4 cut(s)	290, 389, 521, 1340
BslFI	GGGAC	1 cut(s)	1138
BslI	CCNNNNNNNGG	5 cut(s)	137, 225, 1108, 1136, 2134
BsmAI	GTCTC	4 cut(s)	26, 829, 1950, 2048
BsmBI	CGTCTC	1 cut(s)	1950
BsmFI	GGGAC	1 cut(s)	1138
BsmI	GAATGC	2 cut(s)	880, 1242
BsnI	GGCC	8 cut(s)	660, 962, 1005, 1107, 1485, 1530, 1551, 1889
Bso31I	GGTCTC	1 cut(s)	829
BsoBI	CYCGRG	1 cut(s)	825
Bsp1286I	GDGCHC	3 cut(s)	314, 1943, 2159
Bsp1407I	TGTACA	2 cut(s)	1283, 1837
Bsp143I	GATC	4 cut(s)	319, 562, 680, 1368
Bsp1720I	GCTNAGC	2 cut(s)	398, 471
Bsp19I	CCATGG	1 cut(s)	1102
BspACI	CCGC	6 cut(s)	232, 315, 317, 554, 661, 1031
BspANI	GGCC	8 cut(s)	660, 962, 1005, 1107, 1485, 1530, 1551, 1889
BspCNI	CTCAG	6 cut(s)	172, 411, 440, 454, 715, 1675
BspFNI	CGCG	1 cut(s)	317
BspHI	TCATGA	1 cut(s)	1246
BspLI	GGNNCC	3 cut(s)	230, 321, 510
BspPI	GGATC	3 cut(s)	314, 327, 1363
BspTNI	GGTCTC	1 cut(s)	829
BsrDI	GCAATG	4 cut(s)	487, 913, 1442, 1976
BsrFI	RCCGGY	1 cut(s)	520
BsrGI	TGTACA	2 cut(s)	1283, 1837
BsrI	ACTGG	4 cut(s)	206, 482, 841, 2029
BssAI	RCCGGY	1 cut(s)	520
BssECI	CCNNGG	8 cut(s)	290, 315, 512, 1102, 1378, 1531, 1846, 1881
BssMI	GATC	4 cut(s)	319, 562, 680, 1368
BssSI	CACGAG	1 cut(s)	1753
BssT1I	CCWWGG	3 cut(s)	512, 1102, 1881
Bst2BI	CACGAG	1 cut(s)	1753
Bst2UI	CCWGG	2 cut(s)	371, 1109
Bst4CI	ACNGT	8 cut(s)	27, 358, 503, 935, 1026, 1514, 1960, 2109
Bst6I	CTCTTC	5 cut(s)	46, 827, 1153, 1287, 1626
BstAPI	GCANNNNNTGC	1 cut(s)	1973
BstAUI	TGTACA	2 cut(s)	1283, 1837
BstBAI	YACGTR	1 cut(s)	1021
BstC8I	GCNNGC	4 cut(s)	522, 865, 1965, 2197
BstDSI	CCRYGG	3 cut(s)	315, 1102, 1531
BstENI	CCTNNNNNAGG	1 cut(s)	2132
BstF5I	GGATG	5 cut(s)	168, 800, 976, 1151, 1388
BstFNI	CGCG	1 cut(s)	317
BstH2I	RGCGCY	1 cut(s)	870
BstHHI	GCGC	1 cut(s)	869
BstKTI	GATC	4 cut(s)	322, 565, 683, 1371
BstMAI	GTCTC	4 cut(s)	26, 829, 1950, 2048
BstMBI	GATC	4 cut(s)	319, 562, 680, 1368
BstMWI	GCNNNNNNNGC	6 cut(s)	467, 551, 875, 1886, 1973, 2192
BstNI	CCWGG	2 cut(s)	371, 1109
BstNSI	RCATGY	1 cut(s)	943
BstSCI	CCNGG	3 cut(s)	289, 369, 1107
BstSFI	CTRYAG	2 cut(s)	238, 2160
BstSLI	GKGCMC	1 cut(s)	314
BstSNI	TACGTA	1 cut(s)	1021
BstUI	CGCG	1 cut(s)	317
BstV1I	GCAGC	7 cut(s)	163, 445, 511, 1474, 1573, 2027, 2136
BstV2I	GAAGAC	1 cut(s)	1902
BstX2I	RGATCY	1 cut(s)	319
BstXI	CCANNNNNNTGG	1 cut(s)	1559
BstYI	RGATCY	1 cut(s)	319
BsuI	GTATCC	3 cut(s)	474, 1556, 1844
BsuRI	GGCC	8 cut(s)	660, 962, 1005, 1107, 1485, 1530, 1551, 1889
BtgI	CCRYGG	3 cut(s)	315, 1102, 1531
BtrI	CACGTC	2 cut(s)	1650, 1900
BtsCI	GGATG	5 cut(s)	168, 800, 976, 1151, 1388
BtsI	GCAGTG	2 cut(s)	81, 654
Cac8I	GCNNGC	4 cut(s)	522, 865, 1965, 2197
CaiI	CAGNNNCTG	2 cut(s)	80, 548
CciI	TCATGA	1 cut(s)	1246
CfoI	GCGC	1 cut(s)	869
Cfr10I	RCCGGY	1 cut(s)	520
Cfr13I	GGNCC	1 cut(s)	367
Cfr42I	CCGCGG	1 cut(s)	318
Csp6I	GTAC	9 cut(s)	499, 677, 844, 1022, 1284, 1510, 1838, 1990, 2113
CspCI	CAANNNNNGTGG	2 cut(s)	1766, 1801
CviAII	CATG	7 cut(s)	625, 734, 940, 1007, 1103, 1247, 1927
CviQI	GTAC	9 cut(s)	499, 677, 844, 1022, 1284, 1510, 1838, 1990, 2113
DpnI	GATC	4 cut(s)	321, 564, 682, 1370
DpnII	GATC	4 cut(s)	319, 562, 680, 1368
DraI	TTTAAA	1 cut(s)	2209
DraIII	CACNNNGTG	1 cut(s)	225
EaeI	YGGCCR	2 cut(s)	1528, 1887
Eam1104I	CTCTTC	5 cut(s)	46, 827, 1153, 1287, 1626
EarI	CTCTTC	5 cut(s)	46, 827, 1153, 1287, 1626
Ecl136II	GAGCTC	1 cut(s)	2157
Eco105I	TACGTA	1 cut(s)	1021
Eco130I	CCWWGG	3 cut(s)	512, 1102, 1881
Eco24I	GRGCYC	2 cut(s)	1943, 2159
Eco31I	GGTCTC	1 cut(s)	829
Eco47I	GGWCC	1 cut(s)	367
Eco53kI	GAGCTC	1 cut(s)	2157
Eco57I	CTGAAG	3 cut(s)	1433, 1475, 2030
Eco88I	CYCGRG	1 cut(s)	825
EcoICRI	GAGCTC	1 cut(s)	2157
EcoNI	CCTNNNNNAGG	1 cut(s)	2132
EcoRI	GAATTC	2 cut(s)	1097, 1931
EcoRII	CCWGG	2 cut(s)	369, 1107
EcoT14I	CCWWGG	3 cut(s)	512, 1102, 1881
EcoT38I	GRGCYC	2 cut(s)	1943, 2159
ErhI	CCWWGG	3 cut(s)	512, 1102, 1881
Esp3I	CGTCTC	1 cut(s)	1950
FaeI	CATG	7 cut(s)	628, 737, 943, 1010, 1106, 1250, 1930
FalI	AAGNNNNNCTT	4 cut(s)	1402, 1434, 1473, 1505
FaqI	GGGAC	1 cut(s)	1138
FatI	CATG	7 cut(s)	624, 733, 939, 1006, 1102, 1246, 1926
FauI	CCCGC	1 cut(s)	1038
FauNDI	CATATG	2 cut(s)	1696, 2201
FbaI	TGATCA	1 cut(s)	562
FblI	GTMKAC	1 cut(s)	930
Fnu4HI	GCNGC	9 cut(s)	177, 232, 459, 525, 661, 1463, 1587, 2016, 2150
FokI	GGATG	5 cut(s)	175, 807, 983, 1158, 1395
FriOI	GRGCYC	2 cut(s)	1943, 2159
Fsp4HI	GCNGC	9 cut(s)	177, 232, 459, 525, 661, 1463, 1587, 2016, 2150
FspBI	CTAG	3 cut(s)	452, 656, 728
GlaI	GCGC	1 cut(s)	868
GluI	GCNGC	9 cut(s)	177, 232, 459, 525, 661, 1463, 1587, 2016, 2150
GsaI	CCCAGC	1 cut(s)	1600
GsuI	CTGGAG	1 cut(s)	159
HaeII	RGCGCY	1 cut(s)	870
HaeIII	GGCC	8 cut(s)	660, 962, 1005, 1107, 1485, 1530, 1551, 1889
HapII	CCGG	4 cut(s)	290, 389, 521, 1340
HhaI	GCGC	1 cut(s)	869
Hin1II	CATG	7 cut(s)	628, 737, 943, 1010, 1106, 1250, 1930
Hin6I	GCGC	1 cut(s)	867
HinP1I	GCGC	1 cut(s)	867
HindIII	AAGCTT	1 cut(s)	1416
HinfI	GANTC	7 cut(s)	54, 121, 574, 580, 919, 1859, 2071
HpaII	CCGG	4 cut(s)	290, 389, 521, 1340
HphI	GGTGA	4 cut(s)	358, 572, 602, 1241
Hpy166II	GTNNAC	5 cut(s)	298, 312, 931, 1840, 1956
Hpy188III	TCNNGA	2 cut(s)	827, 1247
Hpy8I	GTNNAC	5 cut(s)	298, 312, 931, 1840, 1956
Hpy99I	CGWCG	1 cut(s)	419
HpyAV	CCTTC	9 cut(s)	259, 785, 952, 1475, 1499, 1577, 1635, 1831, 2005
HpyCH4III	ACNGT	8 cut(s)	27, 358, 503, 935, 1026, 1514, 1960, 2109
HpyCH4IV	ACGT	4 cut(s)	1020, 1649, 1780, 1899
HpyF10VI	GCNNNNNNNGC	6 cut(s)	467, 551, 875, 1886, 1973, 2192
HpySE526I	ACGT	4 cut(s)	1020, 1649, 1780, 1899
Hsp92II	CATG	7 cut(s)	628, 737, 943, 1010, 1106, 1250, 1930
HspAI	GCGC	1 cut(s)	867
KroI	GCCGGC	1 cut(s)	520
KroNI	GCCGGC	1 cut(s)	522
Ksp22I	TGATCA	1 cut(s)	562
KspI	CCGCGG	1 cut(s)	318
Kzo9I	GATC	4 cut(s)	319, 562, 680, 1368
LmnI	GCTCC	3 cut(s)	228, 1438, 1722
Lsp1109I	GCAGC	7 cut(s)	163, 445, 511, 1474, 1573, 2027, 2136
LweI	GCATC	4 cut(s)	243, 541, 961, 1136
MaeI	CTAG	3 cut(s)	452, 656, 728
MaeII	ACGT	4 cut(s)	1020, 1649, 1780, 1899
MaeIII	GTNAC	3 cut(s)	118, 208, 935
MalI	GATC	4 cut(s)	321, 564, 682, 1370
MboI	GATC	4 cut(s)	319, 562, 680, 1368
MflI	RGATCY	1 cut(s)	319
MhlI	GDGCHC	3 cut(s)	314, 1943, 2159
MlyI	GAGTC	2 cut(s)	63, 115
MmeI	TCCRAC	4 cut(s)	140, 438, 1430, 1458
MroNI	GCCGGC	1 cut(s)	520
MroXI	GAANNNNTTC	2 cut(s)	1181, 1418
MseI	TTAA	7 cut(s)	606, 924, 986, 2100, 2169, 2208, 2221
MslI	CAYNNNNRTG	1 cut(s)	305
MspA1I	CMGCKG	1 cut(s)	317
MspI	CCGG	4 cut(s)	290, 389, 521, 1340
MspR9I	CCNGG	3 cut(s)	291, 371, 1109
Mva1269I	GAATGC	2 cut(s)	880, 1242
MvaI	CCWGG	2 cut(s)	371, 1109
MvnI	CGCG	1 cut(s)	317
MwoI	GCNNNNNNNGC	6 cut(s)	467, 551, 875, 1886, 1973, 2192
NaeI	GCCGGC	1 cut(s)	522
NciI	CCSGG	1 cut(s)	291
NcoI	CCATGG	1 cut(s)	1102
NdeI	CATATG	2 cut(s)	1696, 2201
NdeII	GATC	4 cut(s)	319, 562, 680, 1368
NgoMIV	GCCGGC	1 cut(s)	520
NlaIII	CATG	7 cut(s)	628, 737, 943, 1010, 1106, 1250, 1930
NlaIV	GGNNCC	3 cut(s)	230, 321, 510
NmeAIII	GCCGAG	2 cut(s)	1403, 2178
NmuCI	GTSAC	3 cut(s)	118, 208, 935
NspI	RCATGY	1 cut(s)	943
PagI	TCATGA	1 cut(s)	1246
PciI	ACATGT	1 cut(s)	939
PctI	GAATGC	2 cut(s)	880, 1242
PdiI	GCCGGC	1 cut(s)	522
PdmI	GAANNNNTTC	2 cut(s)	1181, 1418
PfeI	GAWTC	5 cut(s)	574, 580, 919, 1859, 2071
PflFI	GACNNNGTC	1 cut(s)	2059
PflMI	CCANNNNNTGG	3 cut(s)	225, 1108, 1136
PkrI	GCNGC	9 cut(s)	178, 233, 460, 526, 662, 1464, 1588, 2017, 2151
PleI	GAGTC	2 cut(s)	62, 115
PpsI	GAGTC	2 cut(s)	62, 115
Ppu21I	YACGTR	1 cut(s)	1021
PscI	ACATGT	1 cut(s)	939
PsiI	TTATAA	1 cut(s)	1703
Psp124BI	GAGCTC	1 cut(s)	2159
Psp6I	CCWGG	2 cut(s)	369, 1107
PspFI	CCCAGC	1 cut(s)	1596
PspGI	CCWGG	2 cut(s)	369, 1107
PspN4I	GGNNCC	3 cut(s)	230, 321, 510
PspPI	GGNCC	1 cut(s)	367
PstNI	CAGNNNCTG	2 cut(s)	80, 548
PsuI	RGATCY	1 cut(s)	319
PsyI	GACNNNGTC	1 cut(s)	2059
RsaI	GTAC	9 cut(s)	500, 678, 845, 1023, 1285, 1511, 1839, 1991, 2114
RsaNI	GTAC	9 cut(s)	499, 677, 844, 1022, 1284, 1510, 1838, 1990, 2113
RseI	CAYNNNNRTG	1 cut(s)	305
SacI	GAGCTC	1 cut(s)	2159
SacII	CCGCGG	1 cut(s)	318
SaqAI	TTAA	7 cut(s)	606, 924, 986, 2100, 2169, 2208, 2221
SatI	GCNGC	9 cut(s)	177, 232, 459, 525, 661, 1463, 1587, 2016, 2150
Sau3AI	GATC	4 cut(s)	319, 562, 680, 1368
Sau96I	GGNCC	1 cut(s)	367
SchI	GAGTC	2 cut(s)	63, 115
ScrFI	CCNGG	3 cut(s)	291, 371, 1109
SduI	GDGCHC	3 cut(s)	314, 1943, 2159
SfaNI	GCATC	4 cut(s)	243, 541, 961, 1136
SfcI	CTRYAG	2 cut(s)	238, 2160
Sfr303I	CCGCGG	1 cut(s)	318
SgrBI	CCGCGG	1 cut(s)	318
SinI	GGWCC	1 cut(s)	367
SmiMI	CAYNNNNRTG	1 cut(s)	305
SmlI	CTYRAG	1 cut(s)	213
SmoI	CTYRAG	1 cut(s)	213
SnaBI	TACGTA	1 cut(s)	1021
SsiI	CCGC	6 cut(s)	232, 315, 317, 554, 661, 1031
SspMI	CTAG	3 cut(s)	452, 656, 728
SstI	GAGCTC	1 cut(s)	2159
StyD4I	CCNGG	3 cut(s)	289, 369, 1107
StyI	CCWWGG	3 cut(s)	512, 1102, 1881
TaaI	ACNGT	8 cut(s)	27, 358, 503, 935, 1026, 1514, 1960, 2109
TaiI	ACGT	4 cut(s)	1023, 1652, 1783, 1902
TaqI	TCGA	6 cut(s)	583, 956, 1041, 1089, 1827, 2174
TaqII	GACCGA	1 cut(s)	355
TatI	WGTACW	5 cut(s)	498, 1283, 1509, 1837, 1989
TauI	GCSGC	2 cut(s)	234, 663
TfiI	GAWTC	5 cut(s)	574, 580, 919, 1859, 2071
Tru1I	TTAA	7 cut(s)	606, 924, 986, 2100, 2169, 2208, 2221
Tru9I	TTAA	7 cut(s)	606, 924, 986, 2100, 2169, 2208, 2221
TseFI	GTSAC	3 cut(s)	118, 208, 935
TseI	GCWGC	7 cut(s)	176, 458, 524, 1462, 1586, 2015, 2149
Tsp45I	GTSAC	3 cut(s)	118, 208, 935
Tth111I	GACNNNGTC	1 cut(s)	2059
Van91I	CCANNNNNTGG	3 cut(s)	225, 1108, 1136
VneI	GTGCAC	1 cut(s)	310
VpaK11BI	GGWCC	1 cut(s)	367
XagI	CCTNNNNNAGG	1 cut(s)	2132
XapI	RAATTY	5 cut(s)	1036, 1097, 1181, 1931, 2210
XceI	RCATGY	1 cut(s)	943
XmiI	GTMKAC	1 cut(s)	930
XmnI	GAANNNNTTC	2 cut(s)	1181, 1418
XspI	CTAG	3 cut(s)	452, 656, 728

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.