Rmu_sc0008244.1_g000002

Belongs to the glycosyltransferase 2 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008244.1
Physical Location & Seq
Reverse (-)
4137 .. 5036
900 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008244.1_g000002.1.cds

Sequence Viewer

Length: 729 bp
atgcatgagttacaaagtggaggacctggtcccgggtcctttcctatcattaaactatttcaaatagagaaagctcgagcaattagagttggctcaaaaatgggagaggaaagacatttaccactgtttgagacaacgaaggcaaagggaagagtcctctataggttttctgcggtgtctgtttctgttggcatatgtttgatttgggtttatagagtgactcatataccaaaagctggagaagatggaagatttggttggatgctgttgttcgccgctgagttatggtttgctttttactggttcgtcactcaagcccttcggtggagccgcatcaaccggcataccttcaaggacaggctctctgaaagttatgagaatgagttgccgggggtggacatattcgtgtgcaccgcggatccgatcatagagccaccgattatggtgatgaatactgttctatcggtcatggcttatgactatccgccggagaagctcagcgtgtatctctccgacgatggcggctcagaatttacgtactatgcttttttagaagctgctgagtttgccaagcgctggataccctattgcaagaagtacaatgtggagccaagatcacccgctgcttattttgtctcaacagcttctgatgatcaaagtcagaatcagaaacaagaaggagatttagctgtaattaaggtaattattatttatcttatcattaattaa

Protein Analysis

242

Amino Acids

27.66

Weight (kDa)

6.44

Isoelectric Point (pI)

50.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000273)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G55850
fragaria_vesca FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 236, 576
AccII CGCG 1 cut(s) 416
AciI CCGC 8 cut(s) 173, 276, 331, 414, 416, 485, 522, 621
AclWI GGATC 2 cut(s) 413, 426
AcsI RAATTY 1 cut(s) 530
AfaI GTAC 2 cut(s) 539, 599
AfeI AGCGCT 1 cut(s) 575
AfiI CCNNNNNNNGG 4 cut(s) 32, 236, 324, 576
AgsI TTSAA 2 cut(s) 62, 352
AjnI CCWGG 1 cut(s) 25
AjuI GAANNNNNNNTTGG 2 cut(s) 241, 273
AluBI AGCT 6 cut(s) 74, 236, 496, 557, 644, 689
AluI AGCT 6 cut(s) 74, 236, 496, 557, 644, 689
Alw21I GWGCWC 1 cut(s) 413
Alw26I GTCTC 2 cut(s) 125, 640
Alw44I GTGCAC 1 cut(s) 409
AlwI GGATC 2 cut(s) 413, 426
AlwNI CAGNNNCTG 1 cut(s) 647
Ama87I CYCGRG 2 cut(s) 32, 75
Aor51HI AGCGCT 1 cut(s) 575
ApaLI GTGCAC 1 cut(s) 409
ApeKI GCWGC 2 cut(s) 557, 623
ApoI RAATTY 1 cut(s) 530
AseI ATTAAT 1 cut(s) 723
AspLEI GCGC 1 cut(s) 576
AspS9I GGNCC 3 cut(s) 23, 29, 36
AsuC2I CCSGG 3 cut(s) 33, 34, 390
AsuHPI GGTGA 2 cut(s) 457, 609
AvaI CYCGRG 2 cut(s) 32, 75
AvaII GGWCC 3 cut(s) 23, 29, 36
BaeGI GKGCMC 1 cut(s) 413
BamHI GGATCC 1 cut(s) 418
Bbv12I GWGCWC 1 cut(s) 413
BbvI GCAGC 2 cut(s) 544, 610
BccI CCATC 2 cut(s) 239, 512
BciT130I CCWGG 1 cut(s) 27
BciVI GTATCC 1 cut(s) 573
BclI TGATCA 1 cut(s) 652
BcnI CCSGG 3 cut(s) 33, 34, 390
BcoDI GTCTC 2 cut(s) 125, 640
BfmI CTRYAG 1 cut(s) 160
BfoI RGCGCY 1 cut(s) 577
BfuI GTATCC 1 cut(s) 573
BisI GCNGC 5 cut(s) 276, 331, 523, 558, 624
BlpI GCTNAGC 1 cut(s) 497
BlsI GCNGC 5 cut(s) 277, 332, 524, 559, 625
Bme1390I CCNGG 4 cut(s) 27, 33, 34, 390
Bme18I GGWCC 3 cut(s) 23, 29, 36
BmeT110I CYCGRG 2 cut(s) 32, 75
BmgT120I GGNCC 3 cut(s) 23, 29, 36
BmiI GGNNCC 5 cut(s) 31, 37, 329, 420, 609
BmrFI CCNGG 4 cut(s) 27, 33, 34, 390
BmsI GCATC 2 cut(s) 252, 342
BpmI CTGGAG 1 cut(s) 258
Bpu1102I GCTNAGC 1 cut(s) 497
BpuEI CTTGAG 1 cut(s) 297
BpuMI CCSGG 3 cut(s) 33, 34, 390
BsaAI YACGTR 1 cut(s) 537
BsaJI CCNNGG 3 cut(s) 32, 389, 414
Bsc4I CCNNNNNNNGG 4 cut(s) 32, 236, 324, 576
Bse118I RCCGGY 1 cut(s) 339
Bse1I ACTGG 1 cut(s) 305
BseBI CCWGG 1 cut(s) 27
BseDI CCNNGG 3 cut(s) 32, 389, 414
BseGI GGATG 1 cut(s) 267
BseLI CCNNNNNNNGG 4 cut(s) 32, 236, 324, 576
BseMII CTCAG 4 cut(s) 270, 511, 540, 552
BseNI ACTGG 1 cut(s) 305
BseSI GKGCMC 1 cut(s) 413
BseXI GCAGC 2 cut(s) 544, 610
Bsh1236I CGCG 1 cut(s) 416
BsiHKAI GWGCWC 1 cut(s) 413
BsiHKCI CYCGRG 2 cut(s) 32, 75
BsiSI CCGG 4 cut(s) 33, 340, 389, 488
BslFI GGGAC 1 cut(s) 15
BslI CCNNNNNNNGG 4 cut(s) 32, 236, 324, 576
BsmAI GTCTC 2 cut(s) 125, 640
BsmFI GGGAC 1 cut(s) 15
BsoBI CYCGRG 2 cut(s) 32, 75
Bsp1286I GDGCHC 1 cut(s) 413
Bsp143I GATC 4 cut(s) 418, 423, 614, 652
Bsp1720I GCTNAGC 1 cut(s) 497
BspACI CCGC 8 cut(s) 173, 276, 331, 414, 416, 485, 522, 621
BspCNI CTCAG 4 cut(s) 271, 510, 539, 553
BspFNI CGCG 1 cut(s) 416
BspLI GGNNCC 5 cut(s) 31, 37, 329, 420, 609
BspPI GGATC 2 cut(s) 413, 426
BsrFI RCCGGY 1 cut(s) 339
BsrI ACTGG 1 cut(s) 305
BssAI RCCGGY 1 cut(s) 339
BssECI CCNNGG 3 cut(s) 32, 389, 414
BssMI GATC 4 cut(s) 418, 423, 614, 652
Bst2UI CCWGG 1 cut(s) 27
Bst4CI ACNGT 2 cut(s) 126, 457
Bst6I CTCTTC 1 cut(s) 145
BstBAI YACGTR 1 cut(s) 537
BstDEI CTNAG 4 cut(s) 279, 497, 526, 561
BstDSI CCRYGG 1 cut(s) 414
BstF5I GGATG 1 cut(s) 267
BstFNI CGCG 1 cut(s) 416
BstH2I RGCGCY 1 cut(s) 577
BstHHI GCGC 1 cut(s) 576
BstKTI GATC 4 cut(s) 421, 426, 617, 655
BstMAI GTCTC 2 cut(s) 125, 640
BstMBI GATC 4 cut(s) 418, 423, 614, 652
BstMWI GCNNNNNNNGC 2 cut(s) 493, 566
BstNI CCWGG 1 cut(s) 27
BstSCI CCNGG 4 cut(s) 25, 31, 32, 388
BstSFI CTRYAG 1 cut(s) 160
BstSLI GKGCMC 1 cut(s) 413
BstSNI TACGTA 1 cut(s) 537
BstUI CGCG 1 cut(s) 416
BstV1I GCAGC 2 cut(s) 544, 610
BstX2I RGATCY 1 cut(s) 418
BstYI RGATCY 1 cut(s) 418
BsuI GTATCC 1 cut(s) 573
BtgI CCRYGG 1 cut(s) 414
BtsCI GGATG 1 cut(s) 267
BtsIMutI CAGTG 1 cut(s) 122
CaiI CAGNNNCTG 1 cut(s) 647
CfoI GCGC 1 cut(s) 576
Cfr10I RCCGGY 1 cut(s) 339
Cfr13I GGNCC 3 cut(s) 23, 29, 36
Cfr42I CCGCGG 1 cut(s) 417
Cfr9I CCCGGG 1 cut(s) 32
CsiI ACCWGGT 1 cut(s) 25
Csp6I GTAC 2 cut(s) 538, 598
CviAII CATG 2 cut(s) 5, 469
CviQI GTAC 2 cut(s) 538, 598
DdeI CTNAG 4 cut(s) 279, 497, 526, 561
DpnI GATC 4 cut(s) 420, 425, 616, 654
DpnII GATC 4 cut(s) 418, 423, 614, 652
Eam1104I CTCTTC 1 cut(s) 145
EarI CTCTTC 1 cut(s) 145
EciI GGCGGA 1 cut(s) 474
Eco105I TACGTA 1 cut(s) 537
Eco47I GGWCC 3 cut(s) 23, 29, 36
Eco47III AGCGCT 1 cut(s) 575
Eco88I CYCGRG 2 cut(s) 32, 75
EcoO109I RGGNCCY 2 cut(s) 23, 36
EcoRII CCWGG 1 cut(s) 25
EcoT22I ATGCAT 1 cut(s) 6
FaeI CATG 2 cut(s) 8, 472
FaqI GGGAC 1 cut(s) 15
FatI CATG 2 cut(s) 4, 468
FauI CCCGC 1 cut(s) 628
FauNDI CATATG 1 cut(s) 194
FbaI TGATCA 1 cut(s) 652
Fnu4HI GCNGC 5 cut(s) 276, 331, 523, 558, 624
FokI GGATG 1 cut(s) 274
Fsp4HI GCNGC 5 cut(s) 276, 331, 523, 558, 624
GlaI GCGC 1 cut(s) 575
GluI GCNGC 5 cut(s) 276, 331, 523, 558, 624
GsuI CTGGAG 1 cut(s) 258
HaeII RGCGCY 1 cut(s) 577
HapII CCGG 4 cut(s) 33, 340, 389, 488
HhaI GCGC 1 cut(s) 576
Hin1II CATG 2 cut(s) 8, 472
Hin6I GCGC 1 cut(s) 574
HinP1I GCGC 1 cut(s) 574
HinfI GANTC 3 cut(s) 153, 220, 664
HpaII CCGG 4 cut(s) 33, 340, 389, 488
HphI GGTGA 2 cut(s) 457, 609
Hpy166II GTNNAC 2 cut(s) 397, 411
Hpy188I TCNGA 7 cut(s) 367, 423, 514, 529, 649, 663, 669
Hpy8I GTNNAC 2 cut(s) 397, 411
Hpy99I CGWCG 1 cut(s) 518
HpyAV CCTTC 4 cut(s) 133, 329, 358, 671
HpyCH4III ACNGT 2 cut(s) 126, 457
HpyCH4IV ACGT 1 cut(s) 536
HpyCH4V TGCA 3 cut(s) 4, 411, 591
HpyF10VI GCNNNNNNNGC 2 cut(s) 493, 566
HpyF3I CTNAG 4 cut(s) 279, 497, 526, 561
HpySE526I ACGT 1 cut(s) 536
Hsp92II CATG 2 cut(s) 8, 472
HspAI GCGC 1 cut(s) 574
Ksp22I TGATCA 1 cut(s) 652
KspI CCGCGG 1 cut(s) 417
Kzo9I GATC 4 cut(s) 418, 423, 614, 652
LmnI GCTCC 2 cut(s) 327, 607
Lsp1109I GCAGC 2 cut(s) 544, 610
LweI GCATC 2 cut(s) 252, 342
MabI ACCWGGT 1 cut(s) 25
MaeII ACGT 1 cut(s) 536
MaeIII GTNAC 3 cut(s) 9, 217, 307
MalI GATC 4 cut(s) 420, 425, 616, 654
MboI GATC 4 cut(s) 418, 423, 614, 652
MboII GAAGA 3 cut(s) 162, 254, 261
MflI RGATCY 1 cut(s) 418
MhlI GDGCHC 1 cut(s) 413
MluCI AATT 5 cut(s) 81, 530, 693, 702, 724
MlyI GAGTC 2 cut(s) 162, 214
MmeI TCCRAC 2 cut(s) 239, 537
MnlI CCTC 3 cut(s) 14, 100, 167
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 4 cut(s) 51, 696, 723, 727
MslI CAYNNNNRTG 1 cut(s) 404
MspA1I CMGCKG 3 cut(s) 278, 416, 623
MspI CCGG 4 cut(s) 33, 340, 389, 488
MspR9I CCNGG 4 cut(s) 27, 33, 34, 390
MvaI CCWGG 1 cut(s) 27
MvnI CGCG 1 cut(s) 416
MwoI GCNNNNNNNGC 2 cut(s) 493, 566
NciI CCSGG 3 cut(s) 33, 34, 390
NdeI CATATG 1 cut(s) 194
NdeII GATC 4 cut(s) 418, 423, 614, 652
NlaIII CATG 2 cut(s) 8, 472
NlaIV GGNNCC 5 cut(s) 31, 37, 329, 420, 609
NmuCI GTSAC 2 cut(s) 217, 307
NsiI ATGCAT 1 cut(s) 6
PacI TTAATTAA 1 cut(s) 727
PaeR7I CTCGAG 1 cut(s) 75
PfeI GAWTC 1 cut(s) 664
PflFI GACNNNGTC 1 cut(s) 27
PflMI CCANNNNNTGG 2 cut(s) 236, 576
PkrI GCNGC 5 cut(s) 277, 332, 524, 559, 625
PleI GAGTC 2 cut(s) 161, 214
PpsI GAGTC 2 cut(s) 161, 214
Ppu21I YACGTR 1 cut(s) 537
PpuMI RGGWCCY 2 cut(s) 23, 36
PshBI ATTAAT 1 cut(s) 723
Psp5II RGGWCCY 2 cut(s) 23, 36
Psp6I CCWGG 1 cut(s) 25
PspGI CCWGG 1 cut(s) 25
PspN4I GGNNCC 5 cut(s) 31, 37, 329, 420, 609
PspPI GGNCC 3 cut(s) 23, 29, 36
PspPPI RGGWCCY 2 cut(s) 23, 36
PspXI VCTCGAGB 1 cut(s) 75
PstNI CAGNNNCTG 1 cut(s) 647
PsuI RGATCY 1 cut(s) 418
PsyI GACNNNGTC 1 cut(s) 27
RsaI GTAC 2 cut(s) 539, 599
RsaNI GTAC 2 cut(s) 538, 598
RseI CAYNNNNRTG 1 cut(s) 404
SacII CCGCGG 1 cut(s) 417
SaqAI TTAA 4 cut(s) 51, 696, 723, 727
SatI GCNGC 5 cut(s) 276, 331, 523, 558, 624
Sau3AI GATC 4 cut(s) 418, 423, 614, 652
Sau96I GGNCC 3 cut(s) 23, 29, 36
SchI GAGTC 2 cut(s) 162, 214
ScrFI CCNGG 4 cut(s) 27, 33, 34, 390
SduI GDGCHC 1 cut(s) 413
SexAI ACCWGGT 1 cut(s) 25
SfaNI GCATC 2 cut(s) 252, 342
SfcI CTRYAG 1 cut(s) 160
Sfr274I CTCGAG 1 cut(s) 75
Sfr303I CCGCGG 1 cut(s) 417
SgrBI CCGCGG 1 cut(s) 417
SinI GGWCC 3 cut(s) 23, 29, 36
SlaI CTCGAG 1 cut(s) 75
SmaI CCCGGG 1 cut(s) 34
SmiMI CAYNNNNRTG 1 cut(s) 404
SmlI CTYRAG 2 cut(s) 75, 312
SmoI CTYRAG 2 cut(s) 75, 312
SnaBI TACGTA 1 cut(s) 537
Sse9I AATT 5 cut(s) 81, 530, 693, 702, 724
SsiI CCGC 8 cut(s) 173, 276, 331, 414, 416, 485, 522, 621
StyD4I CCNGG 4 cut(s) 25, 31, 32, 388
TaaI ACNGT 2 cut(s) 126, 457
TaiI ACGT 1 cut(s) 539
TaqI TCGA 1 cut(s) 76
TaqII GACCGA 1 cut(s) 454
TasI AATT 5 cut(s) 81, 530, 693, 702, 724
TatI WGTACW 1 cut(s) 597
TauI GCSGC 3 cut(s) 278, 333, 525
TfiI GAWTC 1 cut(s) 664
Tru1I TTAA 4 cut(s) 51, 696, 723, 727
Tru9I TTAA 4 cut(s) 51, 696, 723, 727
TscAI CASTG 1 cut(s) 129
TseFI GTSAC 2 cut(s) 217, 307
TseI GCWGC 2 cut(s) 557, 623
Tsp45I GTSAC 2 cut(s) 217, 307
TspDTI ATGAA 1 cut(s) 464
TspMI CCCGGG 1 cut(s) 32
TspRI CASTG 1 cut(s) 129
Tth111I GACNNNGTC 1 cut(s) 27
Van91I CCANNNNNTGG 2 cut(s) 236, 576
VneI GTGCAC 1 cut(s) 409
VpaK11BI GGWCC 3 cut(s) 23, 29, 36
VspI ATTAAT 1 cut(s) 723
XapI RAATTY 1 cut(s) 530
XhoI CTCGAG 1 cut(s) 75
XmaI CCCGGG 1 cut(s) 32
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.