Rw0G009920

Belongs to the glycosyltransferase 2 family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00409
Physical Location & Seq
Forward (+)
45889 .. 67763
21875 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G009920.1

Sequence Viewer

Length: 4443 bp
ATGGGAGAGAAAAGACATTTACCACTATTTGAGACAACGAAGGCAAAGGGAAAAGTTCTCTATAGGTTTTCTGCAGTGTCTGTATCTGTTGGTATATGTTTGATTTGGGTTTATAGAGTGACTCATATACCAAAAGCTGGAGAAGATGGAAGATTTGGTTGGATGCTGTTGTTCGCCGCTGAGTTATGGTTCGCTTTTTACTGGTTCGTCACTCAAGCCCTTCGGTGGAGCCGCATCAACCGGCAAACCTTCAAGGATAGGCTCTCTGAAAGATATGAGAATGAGTTGCCGGGGGTGGACATATTCGTGTGCACAGCGGATCCGATCATAGAGCCGCCGATTATGGTGATGAACACTGTTCTGTCGGTCATGGCTTATGACTATCCGGCGGAGAAGCTCAGCGTGTATCTTTCCGACGATGGAGGCTCAGAGTTTACGTACTATGCTTTCTTGGAAGCTGCTGAGTTTGCCAAGCATTGGATACCCTATTGCAAGAAGTACAGTGTGGAGCCAAGATCACCCGCTGCTTATTTTGTCTCAACAGCTTCTGATGATCAAAGTCAGAATCAGAAACAGACCGGGGATTTAGCTGTAATTAAGAAATTATACGAGGACATGGCGGCCAAAATTGGAAATGCAGTGAAGCTAGGCCGCATTTCAGAAGAAGTGAGATCAAAACATAAAGGCTTTTCTCGATGGGACTCATATTCATCAAAACGTGACCATGAAACCATTCTTCAAATAGTAATTGATGGGAGAGACCCAAATGCAAGAGATGTTGAAGGGTGTGTGTTGCCAACTTTGGTGTATTTGGCTCGGGAGAAGAGACCCCAGATTCACCATAACTTCAAAGCTGGTGCTATGAATGCTCTGATTAGGGTATCGTCAAATATAAGCAATGGGAAGTTGATTCTTAATGTAGACTGTGACATGTATTCAAACAACTCGAAGGCCATAAGGGATGCACTCTGCTTCTTAATGGATGAAGAACAAGGCCATGAGATTGCATACGTACAGTTCCCGCAGAATTTCGATAACCTAACTAAGAATGAATTATACGCTTCATTACGAGTATATTTCGAGGTGGAATTCCATGGTCTGGATAATTATTGGGGGACATTATATGTTGGAAGTGGATGCTTTCACAGAAGAGAAACTCTTTGTGGGAAGAAATTCAGCAAGGTAAATAAGAGTGAGATGAAATGGGAGGACAAAAAAGGTGAAGAAATTGGCATTCATGAATTAGAAGAAAGTTCAAGAAGTCTTGCGAGTTGTACATATGAAGAGAACACACAATGGGGAAAAGAGATGGGTTTGAAATATGGGTGTCCGGTTGAAGATGTGATAACGGGGTTATCGATCCAATGCCGAGGATGGAAATCAGTGTATTGCAATCCAACAAGGAAAGCTTTCTTAGGAATAGCTCCAACCACATTGCTTCAGGCACTTCTGCAGCATAAGAGATGGTCGGAAGGCAACCTTCAGATTACGCTGTCTAAGTACAGTGTTGTATGGTATGGCCATGGAAAGATTAGTTTAGGCCATCAGCTTGGATACCTTCGCTACAACTTATGGGCTGCTAATTGCTGGGCAACACTAATTTACTCAACTCTTCCTTCACTTTACCTCCTTAGACGGACGTCCTTATTTCCTCAGATTTCAAGCCGATGGATTATACCATTTGCATATGTTATAATTGCTAAGAACATTGGGAGCTTTGTGGAGTATCTATGGTGTGGAGGCACGAGCTTAGGTTGGTGGAACGACCAACGTATGTGGCTTTACGAGAGAACAACCTCATACTTATTTGCCTTCATCGACACCATTGTACACTACCTCGGATACACAGATTCAGCATTTGTAATAACAGCCAAGGTGGCCGATGAAGACGTGTCCGAACGATATGAGAAAGAAATCATGGAATTCGGGGGCTCGTCTCCAATGTTTACCGTGCTGGCAACACTTGCATTGCTCAATTTGTACTGCTTTGCCTGGTTTCTGAAGGCAGCAATCACTGGAACAAAGGGTGTTGCAGAGGTTTATGAGACAATGTCCTTGCAGATTCTTCTATGTGTGGTTTTGATTGTCATTAACCTACCGTTGTACGAAGCCCTATACCTAAGAAAGGACAAGGGGAAGCTGCCGAGCTCTGTAGCATTTAAGTCGATGGCATTTGCTGGATTTGCTTGCATATGTTTTAAATTTCTATCAATTAGAGTTGGCTCAAAAATGGGAGAGGAAAGACATTTACCACTGTTTGAGACAACGAAGGCAAAGGGAAGAGTCCTCTATAGGTTTTCTGCGGTGTCTGTTTCTGTTGGCATATGTTTGATTTGGGTTTATAGAGTGACTCATATACCAAAAGCTGGAGAAGATGGAAGATTTGGTTGGATGCTGTTGTTCGCCGCTGAGTTATGGTTTGCTTTTTACTGGTTCGTCACTCAAGCCCTTCGGTGGAGCCGCATCAACCGGCATACCTTCAAGGACAGGCTCTCTGAAAGTTATGAGAATGAGTTGCCGGGGGTGGACATATTCGTGTGCACCGCGGATCCGATCATAGAGCCACCGATTATGGTGATGAACACTGTTCTATCGGTCATGGCTTATGACTATCCGCCGGAGAAGCTCAGCGTGTATCTCTCCGACGATGGCGGCTCAGAATTTACGTACTATGCTTTTTTAGAAGCTGCTGAGTTTGCCAAGCGCTGGATACCCTATTGCAAGAAGTACAATGTGGAGCCAAGATCACCCACTGCTTATTTTGTCTCAACAGCTTCTGATGATCAAAGTCAGAATCAGAAACAAGAAGGAGATTTAGCTGTAATTAAGAAATTATATGAGGACATGGCGACCAAAATTGGAAATGCAGTGAAGCTAGGCCGCATTTCAGAAGAAGTGAGATCAAAACATAAAGGCTTTTCTCGATGGGACTCATATTCATCAAAACGTGACCATGAAACCATTCTTCAAATAGTAGTCGATGGGAGAGACCCAAATGCAAGAGATGTTGAAGGGTGTGTGTTGCCAACTTTGGTGTATTTGGCTCGGGAGAAGAGACCCCAGATTCACCATAACTTCAAAGCTGGTGCTATGAATGCTCTGATTAGGGTATCGTCAAATATAAGCAATGGGAAGTTGCTTCTTAATGTAGACTGTGACATGTATTCAAACAACTCGAAGGCCATAAGGGATGCACTCTGCTTCTTAATGGATGAAGAACAAGGCCATGAGATTGCATATGTACAGTTCCCACAGAATTTCGATAACCTTACTAAGAATGAATTATACGCTTCATTACGAGTAATTGCCGAGGTGGAAGCCCATGGACTGGATAATTATTGGGGGACATTATATATTGGGAGTGGATGTTTTCACAGAAGAGAAACTCTTTGTGGGAAGAAATTCAGCAAGGTAAATAAGAGTGAGATAAAATGGGAGGACAAAAAAGGTGAAGAAATTGGCATTCATGAATTAGAAGAAAGTTCAAAAAGTCTTGCGAGTTGTACATTTGAAGAGAACACACAATGGGGAAAAGAGATGGGGGTGAAATATGGGTGTCCGGTTGAAGATGTGTTAACAGGACTATTAATCCAATGCCGAGGATGGAAATCAGTGTATTGCAATCCAACAAGGAAAGCTTTCTTAGGATTAAATGCAACCACACTGCTTCAGGTACTTGTGCAGCATAAGAGATGGTCGGAAGGCAACCTTCAAATTACGCTGTCTAAGTACAGTGTTGTATGGTATGGCCATGGAAAGATTAGTTTAGGCCATCAACTTGGATACCTTCGCTACAACTTGTGGGCTGCTAATTGCTGGGCAACACTAATTTACTCAACTCTTCCTTCACTTTACCTCCTTAGAGGCACGTCCTTATTTCCTCAGATTTCAAGTCGATGGATTATACCATTTGCATATGTTCTAATTGCTAAGAACATTGGAAGCTTTGTGGAGTATCTATGGTGTGGAGGCACGAGCTTAGGTTGGTGGAATGACCAACGTATCTGGCTTTACCAGAGAACAACCTCATACTTATTTGCCTTCATCGACACCATTGTACACTACCTCGGATACACAGATTCAGCATTTGTAATAACAGCCAAGGTGGCCGATGAAGACGTGTCCGAACGATATGAGAAAGAGATCATGGAATTTGGGGGTTCGTCTCCGATGTTTACCGTGCTGGCAACACTTGCATTGCTCAATCTGTACTGCTTTGCCTGGTTTGTGAAGGCATCAATCACCGGAACAAAGGCTATTGCAGAGGTTTATGAGACAATGTTCTTACAGATTCTTCTATGTGCGGTTTTGATTTTAATTAACCTACCGTTGTACGAAGCCCTATACGTAAGGAAGGACAAGGGGAAGCTGCCGAGCTCTGTAGCATTTAAGTCGATGGCATTTGCTGGATTTGCTTGCATATGTTTTAAATTTCTATATTAA

Protein Analysis

1480

Amino Acids

169.13

Weight (kDa)

8.11

Isoelectric Point (pI)

40.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cellulose_synt PF03552 99 - 399 1.1e-92 Cellulose synthase
Cellulose_synt PF03552 421 - 726 1.9e-41 Cellulose synthase
Cellulose_synt PF03552 842 - 1141 7.5e-90 Cellulose synthase
Cellulose_synt PF03552 1163 - 1466 1.3e-38 Cellulose synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000273)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G55850
fragaria_vesca FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1694
AatII GACGTC 1 cut(s) 1643
AccB7I CCANNNNNTGG 6 cut(s) 137, 477, 1099, 2366, 2706, 3328
AccI GTMKAC 2 cut(s) 921, 3150
AccII CGCG 1 cut(s) 2546
AclWI GGATC 5 cut(s) 314, 327, 1354, 2543, 2556
AcoI YGGCCR 5 cut(s) 621, 1519, 1878, 3748, 4107
AcuI CTGAAG 4 cut(s) 1424, 1466, 2021, 3653
AcyI GRCGYC 1 cut(s) 1640
AfeI AGCGCT 1 cut(s) 2705
AfiI CCNNNNNNNGG 9 cut(s) 137, 225, 477, 1099, 2125, 2366, 2454, 2706, 3328
AflIII ACRYGT 4 cut(s) 930, 1890, 3159, 4119
AjiI CACGTC 3 cut(s) 1891, 3870, 4120
AjnI CCWGG 2 cut(s) 1991, 4220
AjuI GAANNNNNNNTTGG 4 cut(s) 142, 174, 2371, 2403
Alw21I GWGCWC 4 cut(s) 314, 2150, 2543, 4379
Alw44I GTGCAC 2 cut(s) 310, 2539
AlwI GGATC 5 cut(s) 314, 327, 1354, 2543, 2556
AlwNI CAGNNNCTG 3 cut(s) 80, 548, 2777
Ama87I CYCGRG 2 cut(s) 816, 3045
Aor51HI AGCGCT 1 cut(s) 2705
ApaLI GTGCAC 2 cut(s) 310, 2539
AseI ATTAAT 1 cut(s) 3587
Asp700I GAANNNNTTC 6 cut(s) 732, 1172, 1409, 2961, 3401, 3638
AspLEI GCGC 1 cut(s) 2706
AsuC2I CCSGG 3 cut(s) 291, 580, 2520
AvaI CYCGRG 2 cut(s) 816, 3045
BaeGI GKGCMC 2 cut(s) 314, 2543
BaeI ACNNNNGTAYC 2 cut(s) 3985, 4018
BalI TGGCCA 2 cut(s) 1521, 3750
BamHI GGATCC 2 cut(s) 319, 2548
BanII GRGCYC 3 cut(s) 1934, 2150, 4379
BauI CACGAG 2 cut(s) 1744, 3973
BbsI GAAGAC 2 cut(s) 1893, 4122
Bbv12I GWGCWC 4 cut(s) 314, 2150, 2543, 4379
BcgI CGANNNNNNTGC 4 cut(s) 2145, 2179, 4374, 4408
BciT130I CCWGG 2 cut(s) 1993, 4222
BciVI GTATCC 6 cut(s) 474, 1547, 1835, 2703, 3776, 4064
BclI TGATCA 2 cut(s) 553, 2782
BcnI CCSGG 3 cut(s) 291, 580, 2520
BfaI CTAG 2 cut(s) 647, 2876
BfmI CTRYAG 6 cut(s) 61, 72, 1451, 2151, 2290, 4380
BfoI RGCGCY 1 cut(s) 2707
BfuI GTATCC 6 cut(s) 474, 1547, 1835, 2703, 3776, 4064
BglI GCCNNNNNGGC 2 cut(s) 1877, 4106
BlpI GCTNAGC 2 cut(s) 398, 2627
Bme1390I CCNGG 5 cut(s) 291, 580, 1993, 2520, 4222
BmeT110I CYCGRG 2 cut(s) 816, 3045
BmgBI CACGTC 3 cut(s) 1891, 3870, 4120
BmiI GGNNCC 6 cut(s) 230, 321, 510, 2459, 2550, 2739
BmrFI CCNGG 5 cut(s) 291, 580, 1993, 2520, 4222
BmsI GCATC 8 cut(s) 153, 243, 952, 1127, 2382, 2472, 3181, 4244
BoxI GACNNNNGTC 1 cut(s) 1639
BpiI GAAGAC 2 cut(s) 1893, 4122
BpmI CTGGAG 2 cut(s) 159, 2388
Bpu10I CCTNAGC 2 cut(s) 1750, 3979
Bpu1102I GCTNAGC 2 cut(s) 398, 2627
BpuEI CTTGAG 2 cut(s) 198, 2427
BpuMI CCSGG 3 cut(s) 291, 580, 2520
Bsa29I ATCGAT 1 cut(s) 1358
BsaAI YACGTR 4 cut(s) 438, 1012, 2667, 4348
BsaBI GATNNNNATC 2 cut(s) 1378, 3607
BsaHI GRCGYC 1 cut(s) 1640
BsaI GGTCTC 4 cut(s) 753, 820, 2982, 3049
BsaWI WCCGGW 3 cut(s) 1330, 3559, 4244
BsaXI ACNNNNNCTCC 6 cut(s) 1611, 1641, 3352, 3382, 3840, 3870
Bsc4I CCNNNNNNNGG 9 cut(s) 137, 225, 477, 1099, 2125, 2366, 2454, 2706, 3328
Bse118I RCCGGY 2 cut(s) 240, 2469
Bse1I ACTGG 4 cut(s) 206, 2020, 2435, 3333
Bse3DI GCAATG 5 cut(s) 904, 1433, 1967, 3133, 4196
Bse8I GATNNNNATC 2 cut(s) 1378, 3607
BseBI CCWGG 2 cut(s) 1993, 4222
BseCI ATCGAT 1 cut(s) 1358
BseJI GATNNNNATC 2 cut(s) 1378, 3607
BseLI CCNNNNNNNGG 9 cut(s) 137, 225, 477, 1099, 2125, 2366, 2454, 2706, 3328
BseMI GCAATG 5 cut(s) 904, 1433, 1967, 3133, 4196
BseNI ACTGG 4 cut(s) 206, 2020, 2435, 3333
BseSI GKGCMC 2 cut(s) 314, 2543
BseYI CCCAGC 2 cut(s) 1587, 3816
BsgI GTGCAG 1 cut(s) 3701
Bsh1236I CGCG 1 cut(s) 2546
BshVI ATCGAT 1 cut(s) 1358
BsiHKAI GWGCWC 4 cut(s) 314, 2150, 2543, 4379
BsiHKCI CYCGRG 2 cut(s) 816, 3045
BslFI GGGAC 4 cut(s) 713, 1129, 2942, 3358
BslI CCNNNNNNNGG 9 cut(s) 137, 225, 477, 1099, 2125, 2366, 2454, 2706, 3328
BsmBI CGTCTC 2 cut(s) 1941, 4170
BsmFI GGGAC 4 cut(s) 713, 1129, 2942, 3358
BsmI GAATGC 4 cut(s) 871, 1233, 3100, 3462
Bso31I GGTCTC 4 cut(s) 753, 820, 2982, 3049
BsoBI CYCGRG 2 cut(s) 816, 3045
Bsp1286I GDGCHC 5 cut(s) 314, 1934, 2150, 2543, 4379
Bsp1407I TGTACA 5 cut(s) 1274, 1828, 3241, 3503, 4057
Bsp1720I GCTNAGC 2 cut(s) 398, 2627
Bsp19I CCATGG 4 cut(s) 1093, 1522, 3322, 3751
BspDI ATCGAT 1 cut(s) 1358
BspFNI CGCG 1 cut(s) 2546
BspHI TCATGA 2 cut(s) 1237, 3466
BspLI GGNNCC 6 cut(s) 230, 321, 510, 2459, 2550, 2739
BspMAI CTGCAG 2 cut(s) 76, 1455
BspPI GGATC 5 cut(s) 314, 327, 1354, 2543, 2556
BspTNI GGTCTC 4 cut(s) 753, 820, 2982, 3049
BsrDI GCAATG 5 cut(s) 904, 1433, 1967, 3133, 4196
BsrFI RCCGGY 2 cut(s) 240, 2469
BsrGI TGTACA 5 cut(s) 1274, 1828, 3241, 3503, 4057
BsrI ACTGG 4 cut(s) 206, 2020, 2435, 3333
BssAI RCCGGY 2 cut(s) 240, 2469
BssNI GRCGYC 1 cut(s) 1640
BssSI CACGAG 2 cut(s) 1744, 3973
BssT1I CCWWGG 6 cut(s) 1093, 1522, 1872, 3322, 3751, 4101
Bst2BI CACGAG 2 cut(s) 1744, 3973
Bst2UI CCWGG 2 cut(s) 1993, 4222
Bst6I CTCTTC 9 cut(s) 818, 1144, 1278, 1617, 2275, 3047, 3373, 3507, 3846
BstACI GRCGYC 1 cut(s) 1640
BstAPI GCANNNNNTGC 2 cut(s) 1964, 4193
BstAUI TGTACA 5 cut(s) 1274, 1828, 3241, 3503, 4057
BstBAI YACGTR 4 cut(s) 438, 1012, 2667, 4348
BstC8I GCNNGC 4 cut(s) 1956, 2188, 4185, 4417
BstDSI CCRYGG 5 cut(s) 1093, 1522, 2544, 3322, 3751
BstENI CCTNNNNNAGG 1 cut(s) 2123
BstFNI CGCG 1 cut(s) 2546
BstH2I RGCGCY 1 cut(s) 2707
BstHHI GCGC 1 cut(s) 2706
BstNI CCWGG 2 cut(s) 1993, 4222
BstNSI RCATGY 2 cut(s) 934, 3163
BstPAI GACNNNNGTC 1 cut(s) 1639
BstSCI CCNGG 5 cut(s) 289, 578, 1991, 2518, 4220
BstSFI CTRYAG 6 cut(s) 61, 72, 1451, 2151, 2290, 4380
BstSLI GKGCMC 2 cut(s) 314, 2543
BstSNI TACGTA 4 cut(s) 438, 1012, 2667, 4348
BstUI CGCG 1 cut(s) 2546
BstV2I GAAGAC 2 cut(s) 1893, 4122
BstX2I RGATCY 2 cut(s) 319, 2548
BstXI CCANNNNNNTGG 2 cut(s) 1550, 3779
BstYI RGATCY 2 cut(s) 319, 2548
Bsu15I ATCGAT 1 cut(s) 1358
BsuI GTATCC 6 cut(s) 474, 1547, 1835, 2703, 3776, 4064
BsuTUI ATCGAT 1 cut(s) 1358
BtgI CCRYGG 5 cut(s) 1093, 1522, 2544, 3322, 3751
BtrI CACGTC 3 cut(s) 1891, 3870, 4120
BtsI GCAGTG 5 cut(s) 81, 645, 2751, 2874, 3662
Cac8I GCNNGC 4 cut(s) 1956, 2188, 4185, 4417
CaiI CAGNNNCTG 3 cut(s) 80, 548, 2777
CciI TCATGA 2 cut(s) 1237, 3466
CfoI GCGC 1 cut(s) 2706
Cfr10I RCCGGY 2 cut(s) 240, 2469
Cfr42I CCGCGG 1 cut(s) 2547
ClaI ATCGAT 1 cut(s) 1358
CspCI CAANNNNNGTGG 2 cut(s) 1757, 1792
DraI TTTAAA 2 cut(s) 2200, 4429
EaeI YGGCCR 5 cut(s) 621, 1519, 1878, 3748, 4107
Eam1104I CTCTTC 9 cut(s) 818, 1144, 1278, 1617, 2275, 3047, 3373, 3507, 3846
EarI CTCTTC 9 cut(s) 818, 1144, 1278, 1617, 2275, 3047, 3373, 3507, 3846
EciI GGCGGA 2 cut(s) 404, 2604
Ecl136II GAGCTC 2 cut(s) 2148, 4377
Eco105I TACGTA 4 cut(s) 438, 1012, 2667, 4348
Eco130I CCWWGG 6 cut(s) 1093, 1522, 1872, 3322, 3751, 4101
Eco24I GRGCYC 3 cut(s) 1934, 2150, 4379
Eco31I GGTCTC 4 cut(s) 753, 820, 2982, 3049
Eco47III AGCGCT 1 cut(s) 2705
Eco53kI GAGCTC 2 cut(s) 2148, 4377
Eco57I CTGAAG 4 cut(s) 1424, 1466, 2021, 3653
Eco88I CYCGRG 2 cut(s) 816, 3045
EcoICRI GAGCTC 2 cut(s) 2148, 4377
EcoNI CCTNNNNNAGG 1 cut(s) 2123
EcoRI GAATTC 2 cut(s) 1088, 1922
EcoRII CCWGG 2 cut(s) 1991, 4220
EcoT14I CCWWGG 6 cut(s) 1093, 1522, 1872, 3322, 3751, 4101
EcoT38I GRGCYC 3 cut(s) 1934, 2150, 4379
ErhI CCWWGG 6 cut(s) 1093, 1522, 1872, 3322, 3751, 4101
Esp3I CGTCTC 2 cut(s) 1941, 4170
FalI AAGNNNNNCTT 8 cut(s) 1393, 1425, 1464, 1496, 3622, 3654, 3693, 3725
FaqI GGGAC 4 cut(s) 713, 1129, 2942, 3358
FauI CCCGC 2 cut(s) 529, 1029
FauNDI CATATG 7 cut(s) 1279, 1687, 2192, 2324, 3238, 3916, 4421
FbaI TGATCA 2 cut(s) 553, 2782
FblI GTMKAC 2 cut(s) 921, 3150
FriOI GRGCYC 3 cut(s) 1934, 2150, 4379
FspBI CTAG 2 cut(s) 647, 2876
GlaI GCGC 1 cut(s) 2705
GsaI CCCAGC 2 cut(s) 1591, 3820
GsuI CTGGAG 2 cut(s) 159, 2388
HaeII RGCGCY 1 cut(s) 2707
HhaI GCGC 1 cut(s) 2706
Hin1I GRCGYC 1 cut(s) 1640
Hin6I GCGC 1 cut(s) 2704
HinP1I GCGC 1 cut(s) 2704
HincII GTYRAC 1 cut(s) 3576
HindII GTYRAC 1 cut(s) 3576
HindIII AAGCTT 3 cut(s) 1407, 3636, 3943
HpaI GTTAAC 1 cut(s) 3576
Hpy188III TCNNGA 8 cut(s) 693, 818, 1100, 1238, 1257, 2922, 3047, 3467
Hpy99I CGWCG 2 cut(s) 419, 2648
Hsp92I GRCGYC 1 cut(s) 1640
HspAI GCGC 1 cut(s) 2704
Ksp22I TGATCA 2 cut(s) 553, 2782
KspAI GTTAAC 1 cut(s) 3576
KspI CCGCGG 1 cut(s) 2547
LmnI GCTCC 6 cut(s) 228, 508, 1429, 1713, 2457, 2737
LweI GCATC 8 cut(s) 153, 243, 952, 1127, 2382, 2472, 3181, 4244
MaeI CTAG 2 cut(s) 647, 2876
MaeIII GTNAC 8 cut(s) 118, 208, 719, 926, 2347, 2437, 2948, 3155
MflI RGATCY 2 cut(s) 319, 2548
MhlI GDGCHC 5 cut(s) 314, 1934, 2150, 2543, 4379
MlsI TGGCCA 2 cut(s) 1521, 3750
MluNI TGGCCA 2 cut(s) 1521, 3750
MlyI GAGTC 5 cut(s) 115, 695, 2292, 2344, 2924
Mox20I TGGCCA 2 cut(s) 1521, 3750
MroXI GAANNNNTTC 6 cut(s) 732, 1172, 1409, 2961, 3401, 3638
MscI TGGCCA 2 cut(s) 1521, 3750
MslI CAYNNNNRTG 2 cut(s) 305, 2534
Msp20I TGGCCA 2 cut(s) 1521, 3750
MspA1I CMGCKG 5 cut(s) 179, 317, 524, 2408, 2546
MspR9I CCNGG 5 cut(s) 291, 580, 1993, 2520, 4222
Mva1269I GAATGC 4 cut(s) 871, 1233, 3100, 3462
MvaI CCWGG 2 cut(s) 1993, 4222
MvnI CGCG 1 cut(s) 2546
NciI CCSGG 3 cut(s) 291, 580, 2520
NcoI CCATGG 4 cut(s) 1093, 1522, 3322, 3751
NdeI CATATG 7 cut(s) 1279, 1687, 2192, 2324, 3238, 3916, 4421
NlaIV GGNNCC 6 cut(s) 230, 321, 510, 2459, 2550, 2739
NmeAIII GCCGAG 5 cut(s) 1394, 2169, 3334, 3623, 4398
NmuCI GTSAC 8 cut(s) 118, 208, 719, 926, 2347, 2437, 2948, 3155
NspI RCATGY 2 cut(s) 934, 3163
PacI TTAATTAA 1 cut(s) 4320
PagI TCATGA 2 cut(s) 1237, 3466
PciI ACATGT 2 cut(s) 930, 3159
PcsI WCGNNNNNNNCGW 1 cut(s) 1355
PctI GAATGC 4 cut(s) 871, 1233, 3100, 3462
PdmI GAANNNNTTC 6 cut(s) 732, 1172, 1409, 2961, 3401, 3638
PfeI GAWTC 9 cut(s) 565, 835, 910, 1850, 2062, 2794, 3064, 4079, 4291
PflFI GACNNNGTC 1 cut(s) 2050
PflMI CCANNNNNTGG 6 cut(s) 137, 477, 1099, 2366, 2706, 3328
PleI GAGTC 5 cut(s) 115, 695, 2291, 2344, 2924
PpsI GAGTC 5 cut(s) 115, 695, 2291, 2344, 2924
Ppu21I YACGTR 4 cut(s) 438, 1012, 2667, 4348
PscI ACATGT 2 cut(s) 930, 3159
PshAI GACNNNNGTC 1 cut(s) 1639
PshBI ATTAAT 1 cut(s) 3587
PsiI TTATAA 1 cut(s) 1694
Psp124BI GAGCTC 2 cut(s) 2150, 4379
Psp6I CCWGG 2 cut(s) 1991, 4220
PspFI CCCAGC 2 cut(s) 1587, 3816
PspGI CCWGG 2 cut(s) 1991, 4220
PspN4I GGNNCC 6 cut(s) 230, 321, 510, 2459, 2550, 2739
PstI CTGCAG 2 cut(s) 76, 1455
PstNI CAGNNNCTG 3 cut(s) 80, 548, 2777
PsuI RGATCY 2 cut(s) 319, 2548
PsyI GACNNNGTC 1 cut(s) 2050
RseI CAYNNNNRTG 2 cut(s) 305, 2534
SacI GAGCTC 2 cut(s) 2150, 4379
SacII CCGCGG 1 cut(s) 2547
SchI GAGTC 5 cut(s) 115, 695, 2292, 2344, 2924
ScrFI CCNGG 5 cut(s) 291, 580, 1993, 2520, 4222
SduI GDGCHC 5 cut(s) 314, 1934, 2150, 2543, 4379
SfaNI GCATC 8 cut(s) 153, 243, 952, 1127, 2382, 2472, 3181, 4244
SfcI CTRYAG 6 cut(s) 61, 72, 1451, 2151, 2290, 4380
Sfr303I CCGCGG 1 cut(s) 2547
SgrBI CCGCGG 1 cut(s) 2547
SmiMI CAYNNNNRTG 2 cut(s) 305, 2534
SmlI CTYRAG 2 cut(s) 213, 2442
SmoI CTYRAG 2 cut(s) 213, 2442
SnaBI TACGTA 4 cut(s) 438, 1012, 2667, 4348
SspMI CTAG 2 cut(s) 647, 2876
SstI GAGCTC 2 cut(s) 2150, 4379
StyD4I CCNGG 5 cut(s) 289, 578, 1991, 2518, 4220
StyI CCWWGG 6 cut(s) 1093, 1522, 1872, 3322, 3751, 4101
TaqII GACCGA 2 cut(s) 355, 2584
TauI GCSGC 9 cut(s) 179, 234, 337, 623, 654, 2408, 2463, 2655, 2883
TfiI GAWTC 9 cut(s) 565, 835, 910, 1850, 2062, 2794, 3064, 4079, 4291
TseFI GTSAC 8 cut(s) 118, 208, 719, 926, 2347, 2437, 2948, 3155
Tsp45I GTSAC 8 cut(s) 118, 208, 719, 926, 2347, 2437, 2948, 3155
TspGWI ACGGA 1 cut(s) 1651
Tth111I GACNNNGTC 1 cut(s) 2050
Van91I CCANNNNNTGG 6 cut(s) 137, 477, 1099, 2366, 2706, 3328
VneI GTGCAC 2 cut(s) 310, 2539
VspI ATTAAT 1 cut(s) 3587
XagI CCTNNNNNAGG 1 cut(s) 2123
XceI RCATGY 2 cut(s) 934, 3163
XmiI GTMKAC 2 cut(s) 921, 3150
XmnI GAANNNNTTC 6 cut(s) 732, 1172, 1409, 2961, 3401, 3638
XspI CTAG 2 cut(s) 647, 2876
ZraI GACGTC 1 cut(s) 1641
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.