Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000273

Physical Location & Seq

Genomic Coordinates Forward (+)

82573253 .. 82576709

Gene Structure 3457 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ35145

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2232 bp

ATGGGGAAGAAGGAAGGAGGAGAAGGAGAAGAGAGTAGTAGTACTACTACTACTCTTCCATTGTTTGAGAGCAAAACAGCAAGATTTAGAGGTGTTTATAGGGTTTTTGCCTCAACTATATTTGTGGGAGCGTGTTTGATATGGGTGTACAGACTAATAAACATCCCGAAAGCTGGAGAGAGAGGGAGATGGGCGTGGATTGGTATGCTCATGGCTGAGTTCTTGTTTGGTTTGTATTGGATCATCACTCAGTCTGTTCGCTGGAGTGTCACTTATCGTCAACCTCTCAAGAATAGACTCTCACAGAGATATGAGGAGAAGTTGCCGGGTGTTGATGTTTTTATATGCACTGCAGACCCGAAAATGGAGCCGCCAAGTTTGGTGATTAACACTGTGTTATCAGTCCTGTCCTGCAATTTTCCATCTGAGAAGTTGAGTGTTTATCTCTCGGATGATGGCGGTTCACAGTTTACTTTCTATGCTCTTTTGGAGGCGTCTCGGTTCTCCAAGTATTGGATACCCTTTTGCAAGAAGTTCAAGGTTGAACCAAGGGCACCGGAGGTTTACTTTACCCTGCATTCTGACGTTAATGACACCAAATATGGTCCAGAATGGTTTGATACCAAGAAACTTTATGAAGAAATGAAAAATCGGATCGATTCTGTTGTTGAAAGTGGGAAGATACCAGAAGAAACAAGGAATCAACACAAAGGGTTCTCAGAATGGAACCTTAAAGTAGCAAAGAATGATCATCACTCAATTATGCAGATTATAACTGATGGAAGAGACACAAATGCCGTGGACAACGATGGATGCCGATTACCAACTATTGTCTACATGTCAAGAGAAAAGAGACCCCAACAGCCACACAACTTCAAAGCTGGAGCCATGAATGCACTGCTGAGAGTGTCATCAGAGATAAGCAATGCACCCTTCATTCTCAACTTGGACTGTGACATGTACGCAAACAATGCAGATGCAATACGAGAGGCACTTTGTTTCTTCTTGGATGAAAAGACTGGCCACGAGACTGCTTACGTGCAACATCCGCAGTTCTACAACAATCTCACAAAGAATGATATTTATGGAAATGCATGCTTCGTGACTAATGCGGTTGAACTGGCTGGGTTAGGTGGATATGGAGCGGCCTTGTATTGTGGCACCGGATGTTTCCATCGAAGAGAATGTCTCTGTGGAAAGAAGTATTCAAAGGGTTACACAGAAAAATGGAACATTGATGGCCAGAATAGTACTATTGACAAAAGTATCCAAGAATTGGAGGAATCTACGAAACCTCTTATCGATTGTAGCTATGAAAAGGGCAGTCAATGGGGAAAAGAGATGGGACTGATATATGGATGCCCTGTCGAAGATATAGTTACTGGTTTGGCAATACAATGCAGGGGTTGGAAATCAGTTTATTACAATCCAGAAAGGCCTTCCTTTGTTGGTGTTGCTCCAAACACCCTAGAAATCGCACTTGTTCAACAAAAGAGGTGGTCTGAGGGCATGTTTCAGATATTTTTCTCCGAGTATTGCCCTTTCATATATGGACATGGGAAGATACACTTTGGTGCCCAAATGGGATATTGCCTCTACCTTCTATGGGCTCCAGTTTCATTCCCAACTTTGTATTATGCACTTGTTCCTCCTCTTTGCTTGCTCCATGGCATTCCCTTGTTCCCCAAGGTGTCAAGCCTATGGTTCCTAGCATTTGCTTATGTTTTTGTAGCAAAGAATGCATACAGCATGGTTGAATTTGTGATGTGTGGGGGTACACTCAAAGCATGGTGGAACCTACAAAGAATGTGGCTGATCCGACGAATCACTTCGTACTTCTTTGCCTTCTTCGACACCATAAAGAGGCAATTGGGGCTATCTGAAACACACTTTGCCCTCACCGATAAGGTTGTCACCGATGATGTGTTAAAGAGGTATGAGCAAGAGGTTTTGGAATTTGGAAGCTCAAGCATTATGTACACTGTAATGGCAACATCGGCATTGCTTAACTTGGTGAGCTTAGTTTTGGGGACAAAGCGGGTTGTGATGGATTTAGAGTTGAAGGCCTTGGACCAGTTCATTAGTCAAGTTATTCTTTGTGGCATATTGGTTTTGATCAATATACCAGTGTATGAAGCTCTCTTCTTGCGCAGTGATAAGGGCCATATACCATCCTCTGTCATGTACAAGTCTGTTTTTGTGCTCACGTTGGCATGCTTGATGCCTATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

743

Amino Acids

84.62

Weight (kDa)

7.71

Isoelectric Point (pI)

40.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	111 - 403	1.6e-89	Cellulose synthase
Cellulose_synt	PF03552	427 - 737	1.4e-43	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55850
fragaria_vesca	FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica	MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica	Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis	pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis	RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata	RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora	Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii	Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa	Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha	Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana	Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	773
Acc16I	TGCGCA	1 cut(s)	2150
AccB1I	GGYRCC	3 cut(s)	553, 1160, 1574
AccB7I	CCANNNNNTGG	2 cut(s)	513, 1276
AccBSI	CCGCTC	1 cut(s)	1145
AccI	GTMKAC	1 cut(s)	834
AciI	CCGC	6 cut(s)	371, 459, 1049, 1112, 1145, 2038
AclWI	GGATC	3 cut(s)	248, 662, 1810
AcoI	YGGCCR	2 cut(s)	1021, 1240
AcsI	RAATTY	2 cut(s)	1757, 1955
AcyI	GRCGYC	1 cut(s)	494
AfaI	GTAC	8 cut(s)	43, 149, 962, 1252, 1777, 1835, 1979, 2186
AfiI	CCNNNNNNNGG	6 cut(s)	173, 364, 513, 1276, 1606, 1863
AflIII	ACRYGT	2 cut(s)	837, 957
AgsI	TTSAA	9 cut(s)	538, 545, 671, 877, 1118, 1209, 1487, 1757, 2062
AleI	CACNNNNGTG	1 cut(s)	1572
AluBI	AGCT	6 cut(s)	173, 881, 1311, 1965, 2019, 2138
AluI	AGCT	6 cut(s)	173, 881, 1311, 1965, 2019, 2138
Alw21I	GWGCWC	1 cut(s)	2205
Alw26I	GTCTC	5 cut(s)	501, 780, 847, 1022, 1193
AlwI	GGATC	3 cut(s)	248, 662, 1810
AoxI	GGCC	6 cut(s)	1021, 1146, 1240, 1436, 2064, 2161
ApoI	RAATTY	2 cut(s)	1757, 1955
ArsI	GACNNNNNNTTYG	2 cut(s)	1171, 1203
Asp700I	GAANNNNTTC	1 cut(s)	1828
AspLEI	GCGC	1 cut(s)	2151
AspS9I	GGNCC	3 cut(s)	605, 2071, 2161
AsuC2I	CCSGG	1 cut(s)	327
AsuHPI	GGTGA	4 cut(s)	394, 1891, 1906, 2026
AvaII	GGWCC	2 cut(s)	605, 2071
BaeGI	GKGCMC	2 cut(s)	556, 1579
BaeI	ACNNNNGTAYC	2 cut(s)	1249, 1282
BalI	TGGCCA	2 cut(s)	1023, 1242
BanI	GGYRCC	3 cut(s)	553, 1160, 1574
BanII	GRGCYC	1 cut(s)	1612
BauI	CACGAG	1 cut(s)	1025
Bbv12I	GWGCWC	1 cut(s)	2205
BceAI	ACGGC	1 cut(s)	782
BciVI	GTATCC	2 cut(s)	510, 1277
BclI	TGATCA	2 cut(s)	748, 2115
BcnI	CCSGG	1 cut(s)	327
BcoDI	GTCTC	5 cut(s)	501, 780, 847, 1022, 1193
BfaI	CTAG	2 cut(s)	1469, 1709
BfmI	CTRYAG	1 cut(s)	351
BfuI	GTATCC	2 cut(s)	510, 1277
BisI	GCNGC	2 cut(s)	371, 1146
BlsI	GCNGC	2 cut(s)	372, 1147
BmcAI	AGTACT	2 cut(s)	43, 1252
Bme1390I	CCNGG	1 cut(s)	327
Bme18I	GGWCC	2 cut(s)	605, 2071
BmgT120I	GGNCC	3 cut(s)	605, 2071, 2161
BmiI	GGNNCC	9 cut(s)	369, 555, 728, 886, 1162, 1576, 1611, 1706, 1796
BmrFI	CCNGG	1 cut(s)	327
BmsI	GCATC	4 cut(s)	803, 967, 1349, 2211
BplI	GAGNNNNNCTC	2 cut(s)	1173, 1205
BpmI	CTGGAG	4 cut(s)	195, 283, 903, 1596
BpuEI	CTTGAG	2 cut(s)	272, 1951
BpuMI	CCSGG	1 cut(s)	327
Bsa29I	ATCGAT	2 cut(s)	657, 1302
BsaAI	YACGTR	1 cut(s)	1039
BsaHI	GRCGYC	1 cut(s)	494
BsaI	GGTCTC	1 cut(s)	847
BsaJI	CCNNGG	5 cut(s)	548, 798, 1666, 1686, 2067
BsaWI	WCCGGW	2 cut(s)	556, 1163
Bsc4I	CCNNNNNNNGG	6 cut(s)	173, 364, 513, 1276, 1606, 1863
Bse1I	ACTGG	6 cut(s)	1024, 1125, 1387, 1613, 2074, 2126
Bse3DI	GCAATG	2 cut(s)	931, 2000
BseCI	ATCGAT	2 cut(s)	657, 1302
BseDI	CCNNGG	5 cut(s)	548, 798, 1666, 1686, 2067
BseGI	GGATG	8 cut(s)	162, 457, 818, 1015, 1045, 1172, 1364, 2171
BseLI	CCNNNNNNNGG	6 cut(s)	173, 364, 513, 1276, 1606, 1863
BseMI	GCAATG	2 cut(s)	931, 2000
BseMII	CTCAG	6 cut(s)	207, 263, 417, 732, 893, 1494
BseNI	ACTGG	6 cut(s)	1024, 1125, 1387, 1613, 2074, 2126
BseRI	GAGGAG	3 cut(s)	33, 329, 1641
BseSI	GKGCMC	2 cut(s)	556, 1579
BseYI	CCCAGC	1 cut(s)	1124
BshFI	GGCC	6 cut(s)	1023, 1148, 1242, 1438, 2066, 2163
BshNI	GGYRCC	3 cut(s)	553, 1160, 1574
BshVI	ATCGAT	2 cut(s)	657, 1302
BsiHKAI	GWGCWC	1 cut(s)	2205
BsiSI	CCGG	3 cut(s)	326, 557, 1164
BslFI	GGGAC	2 cut(s)	1359, 2044
BslI	CCNNNNNNNGG	6 cut(s)	173, 364, 513, 1276, 1606, 1863
BsmAI	GTCTC	5 cut(s)	501, 780, 847, 1022, 1193
BsmBI	CGTCTC	1 cut(s)	501
BsmFI	GGGAC	2 cut(s)	1359, 2044
BsmI	GAATGC	4 cut(s)	577, 898, 1671, 1744
BsnI	GGCC	6 cut(s)	1023, 1148, 1242, 1438, 2066, 2163
Bso31I	GGTCTC	1 cut(s)	847
Bsp1286I	GDGCHC	4 cut(s)	556, 1579, 1612, 2205
Bsp1407I	TGTACA	3 cut(s)	147, 1977, 2184
Bsp143I	GATC	5 cut(s)	240, 654, 748, 1815, 2115
Bsp19I	CCATGG	1 cut(s)	1666
BspACI	CCGC	6 cut(s)	371, 459, 1049, 1112, 1145, 2038
BspANI	GGCC	6 cut(s)	1023, 1148, 1242, 1438, 2066, 2163
BspCNI	CTCAG	6 cut(s)	208, 262, 418, 731, 894, 1495
BspDI	ATCGAT	2 cut(s)	657, 1302
BspLI	GGNNCC	9 cut(s)	369, 555, 728, 886, 1162, 1576, 1611, 1706, 1796
BspMAI	CTGCAG	1 cut(s)	355
BspPI	GGATC	3 cut(s)	248, 662, 1810
BspT107I	GGYRCC	3 cut(s)	553, 1160, 1574
BspTNI	GGTCTC	1 cut(s)	847
BsrBI	CCGCTC	1 cut(s)	1145
BsrDI	GCAATG	2 cut(s)	931, 2000
BsrGI	TGTACA	3 cut(s)	147, 1977, 2184
BsrI	ACTGG	6 cut(s)	1024, 1125, 1387, 1613, 2074, 2126
BssECI	CCNNGG	5 cut(s)	548, 798, 1666, 1686, 2067
BssMI	GATC	5 cut(s)	240, 654, 748, 1815, 2115
BssNI	GRCGYC	1 cut(s)	494
BssSI	CACGAG	1 cut(s)	1025
BssT1I	CCWWGG	4 cut(s)	548, 1666, 1686, 2067
Bst2BI	CACGAG	1 cut(s)	1025
Bst4CI	ACNGT	4 cut(s)	394, 468, 953, 1984
Bst6I	CTCTTC	5 cut(s)	24, 60, 778, 1174, 2147
BstACI	GRCGYC	1 cut(s)	494
BstAPI	GCANNNNNTGC	2 cut(s)	971, 1739
BstAUI	TGTACA	3 cut(s)	147, 1977, 2184
BstBAI	YACGTR	1 cut(s)	1039
BstC8I	GCNNGC	3 cut(s)	1096, 1661, 2215
BstDEI	CTNAG	7 cut(s)	216, 249, 426, 718, 902, 1503, 2020
BstDSI	CCRYGG	2 cut(s)	798, 1666
BstF5I	GGATG	8 cut(s)	162, 457, 818, 1015, 1045, 1172, 1364, 2171
BstHHI	GCGC	1 cut(s)	2151
BstKTI	GATC	5 cut(s)	243, 657, 751, 1818, 2118
BstMAI	GTCTC	5 cut(s)	501, 780, 847, 1022, 1193
BstMBI	GATC	5 cut(s)	240, 654, 748, 1815, 2115
BstMWI	GCNNNNNNNGC	6 cut(s)	893, 971, 1048, 1739, 1873, 1997
BstNSI	RCATGY	5 cut(s)	841, 961, 1098, 1513, 2217
BstSCI	CCNGG	1 cut(s)	325
BstSFI	CTRYAG	1 cut(s)	351
BstSLI	GKGCMC	2 cut(s)	556, 1579
Bsu15I	ATCGAT	2 cut(s)	657, 1302
BsuI	GTATCC	2 cut(s)	510, 1277
BsuRI	GGCC	6 cut(s)	1023, 1148, 1242, 1438, 2066, 2163
BsuTUI	ATCGAT	2 cut(s)	657, 1302
BtgI	CCRYGG	2 cut(s)	798, 1666
BtsCI	GGATG	8 cut(s)	162, 457, 818, 1015, 1045, 1172, 1364, 2171
BtsI	GCAGTG	3 cut(s)	348, 896, 2158
BtsIMutI	CAGTG	6 cut(s)	348, 390, 896, 1980, 2133, 2158
Cac8I	GCNNGC	3 cut(s)	1096, 1661, 2215
CfoI	GCGC	1 cut(s)	2151
Cfr13I	GGNCC	3 cut(s)	605, 2071, 2161
ClaI	ATCGAT	2 cut(s)	657, 1302
CseI	GACGC	1 cut(s)	483
Csp6I	GTAC	8 cut(s)	42, 148, 961, 1251, 1776, 1834, 1978, 2185
CspCI	CAANNNNNGTGG	6 cut(s)	780, 815, 1478, 1513, 1790, 1825
CviQI	GTAC	8 cut(s)	42, 148, 961, 1251, 1776, 1834, 1978, 2185
DdeI	CTNAG	7 cut(s)	216, 249, 426, 718, 902, 1503, 2020
DpnI	GATC	5 cut(s)	242, 656, 750, 1817, 2117
DpnII	GATC	5 cut(s)	240, 654, 748, 1815, 2115
EaeI	YGGCCR	2 cut(s)	1021, 1240
Eam1104I	CTCTTC	5 cut(s)	24, 60, 778, 1174, 2147
EarI	CTCTTC	5 cut(s)	24, 60, 778, 1174, 2147
Eco130I	CCWWGG	4 cut(s)	548, 1666, 1686, 2067
Eco147I	AGGCCT	2 cut(s)	1438, 2066
Eco24I	GRGCYC	1 cut(s)	1612
Eco31I	GGTCTC	1 cut(s)	847
Eco47I	GGWCC	2 cut(s)	605, 2071
EcoT14I	CCWWGG	4 cut(s)	548, 1666, 1686, 2067
EcoT22I	ATGCAT	2 cut(s)	1096, 1744
EcoT38I	GRGCYC	1 cut(s)	1612
ErhI	CCWWGG	4 cut(s)	548, 1666, 1686, 2067
Esp3I	CGTCTC	1 cut(s)	501
FalI	AAGNNNNNCTT	4 cut(s)	1553, 1585, 2079, 2111
FaqI	GGGAC	2 cut(s)	1359, 2044
FauI	CCCGC	1 cut(s)	2031
FbaI	TGATCA	2 cut(s)	748, 2115
FblI	GTMKAC	1 cut(s)	834
Fnu4HI	GCNGC	2 cut(s)	371, 1146
FokI	GGATG	8 cut(s)	149, 464, 825, 1022, 1032, 1179, 1371, 2158
FriOI	GRGCYC	1 cut(s)	1612
Fsp4HI	GCNGC	2 cut(s)	371, 1146
FspBI	CTAG	2 cut(s)	1469, 1709
FspI	TGCGCA	1 cut(s)	2150
GlaI	GCGC	1 cut(s)	2150
GluI	GCNGC	2 cut(s)	371, 1146
GsaI	CCCAGC	1 cut(s)	1128
GsuI	CTGGAG	4 cut(s)	195, 283, 903, 1596
HaeIII	GGCC	6 cut(s)	1023, 1148, 1242, 1438, 2066, 2163
HapII	CCGG	3 cut(s)	326, 557, 1164
HgaI	GACGC	1 cut(s)	483
HhaI	GCGC	1 cut(s)	2151
Hin1I	GRCGYC	1 cut(s)	494
Hin6I	GCGC	1 cut(s)	2149
HinP1I	GCGC	1 cut(s)	2149
HincII	GTYRAC	1 cut(s)	281
HindII	GTYRAC	1 cut(s)	281
HinfI	GANTC	5 cut(s)	297, 659, 700, 1283, 1824
HpaII	CCGG	3 cut(s)	326, 557, 1164
HphI	GGTGA	4 cut(s)	394, 1891, 1906, 2026
Hpy166II	GTNNAC	9 cut(s)	148, 281, 464, 471, 565, 802, 835, 1778, 1980
Hpy188III	TCNNGA	6 cut(s)	166, 289, 608, 843, 1102, 1430
Hpy8I	GTNNAC	9 cut(s)	148, 281, 464, 471, 565, 802, 835, 1778, 1980
Hpy99I	CGWCG	1 cut(s)	1824
HpyAV	CCTTC	8 cut(s)	4, 8, 17, 943, 1449, 1610, 1855, 2056
HpyCH4III	ACNGT	4 cut(s)	394, 468, 953, 1984
HpyCH4IV	ACGT	3 cut(s)	585, 1038, 2207
HpyF10VI	GCNNNNNNNGC	6 cut(s)	893, 971, 1048, 1739, 1873, 1997
HpyF3I	CTNAG	7 cut(s)	216, 249, 426, 718, 902, 1503, 2020
HpySE526I	ACGT	3 cut(s)	585, 1038, 2207
Hsp92I	GRCGYC	1 cut(s)	494
HspAI	GCGC	1 cut(s)	2149
Ksp22I	TGATCA	2 cut(s)	748, 2115
Kzo9I	GATC	5 cut(s)	240, 654, 748, 1815, 2115
LmnI	GCTCC	7 cut(s)	128, 367, 884, 1142, 1462, 1615, 1668
LweI	GCATC	4 cut(s)	803, 967, 1349, 2211
MaeI	CTAG	2 cut(s)	1469, 1709
MaeII	ACGT	3 cut(s)	585, 1038, 2207
MaeIII	GTNAC	6 cut(s)	268, 953, 1102, 1214, 1378, 1912
MalI	GATC	5 cut(s)	242, 656, 750, 1817, 2117
MbiI	CCGCTC	1 cut(s)	1145
MboI	GATC	5 cut(s)	240, 654, 748, 1815, 2115
MfeI	CAATTG	1 cut(s)	1868
MhlI	GDGCHC	4 cut(s)	556, 1579, 1612, 2205
MlsI	TGGCCA	2 cut(s)	1023, 1242
MluCI	AATT	6 cut(s)	415, 759, 1274, 1757, 1868, 1955
MluNI	TGGCCA	2 cut(s)	1023, 1242
MlyI	GAGTC	1 cut(s)	291
MmeI	TCCRAC	2 cut(s)	1388, 1843
Mox20I	TGGCCA	2 cut(s)	1023, 1242
Mph1103I	ATGCAT	2 cut(s)	1096, 1744
MroXI	GAANNNNTTC	1 cut(s)	1828
MscI	TGGCCA	2 cut(s)	1023, 1242
MseI	TTAA	5 cut(s)	387, 588, 732, 1928, 2007
MslI	CAYNNNNRTG	2 cut(s)	1572, 1985
Msp20I	TGGCCA	2 cut(s)	1023, 1242
MspI	CCGG	3 cut(s)	326, 557, 1164
MspR9I	CCNGG	1 cut(s)	327
MunI	CAATTG	1 cut(s)	1868
Mva1269I	GAATGC	4 cut(s)	577, 898, 1671, 1744
MwoI	GCNNNNNNNGC	6 cut(s)	893, 971, 1048, 1739, 1873, 1997
NciI	CCSGG	1 cut(s)	327
NcoI	CCATGG	1 cut(s)	1666
NdeII	GATC	5 cut(s)	240, 654, 748, 1815, 2115
NlaIV	GGNNCC	9 cut(s)	369, 555, 728, 886, 1162, 1576, 1611, 1706, 1796
NmuCI	GTSAC	4 cut(s)	268, 953, 1102, 1912
NsbI	TGCGCA	1 cut(s)	2150
NsiI	ATGCAT	2 cut(s)	1096, 1744
NspI	RCATGY	5 cut(s)	841, 961, 1098, 1513, 2217
OliI	CACNNNNGTG	1 cut(s)	1572
PaeI	GCATGC	2 cut(s)	1098, 2217
PceI	AGGCCT	2 cut(s)	1438, 2066
PciI	ACATGT	2 cut(s)	837, 957
PctI	GAATGC	4 cut(s)	577, 898, 1671, 1744
PdmI	GAANNNNTTC	1 cut(s)	1828
PfeI	GAWTC	4 cut(s)	659, 700, 1283, 1824
PflMI	CCANNNNNTGG	2 cut(s)	513, 1276
PkrI	GCNGC	2 cut(s)	372, 1147
PleI	GAGTC	1 cut(s)	291
PpsI	GAGTC	1 cut(s)	291
Ppu21I	YACGTR	1 cut(s)	1039
PscI	ACATGT	2 cut(s)	837, 957
PsiI	TTATAA	1 cut(s)	773
PspFI	CCCAGC	1 cut(s)	1124
PspN4I	GGNNCC	9 cut(s)	369, 555, 728, 886, 1162, 1576, 1611, 1706, 1796
PspPI	GGNCC	3 cut(s)	605, 2071, 2161
PstI	CTGCAG	1 cut(s)	355
RsaI	GTAC	8 cut(s)	43, 149, 962, 1252, 1777, 1835, 1979, 2186
RsaNI	GTAC	8 cut(s)	42, 148, 961, 1251, 1776, 1834, 1978, 2185
RseI	CAYNNNNRTG	2 cut(s)	1572, 1985
SaqAI	TTAA	5 cut(s)	387, 588, 732, 1928, 2007
SatI	GCNGC	2 cut(s)	371, 1146
Sau3AI	GATC	5 cut(s)	240, 654, 748, 1815, 2115
Sau96I	GGNCC	3 cut(s)	605, 2071, 2161
ScaI	AGTACT	2 cut(s)	43, 1252
SchI	GAGTC	1 cut(s)	291
ScrFI	CCNGG	1 cut(s)	327
SduI	GDGCHC	4 cut(s)	556, 1579, 1612, 2205
SfaNI	GCATC	4 cut(s)	803, 967, 1349, 2211
SfcI	CTRYAG	1 cut(s)	351
SinI	GGWCC	2 cut(s)	605, 2071
SmiMI	CAYNNNNRTG	2 cut(s)	1572, 1985
SmlI	CTYRAG	2 cut(s)	287, 1966
SmoI	CTYRAG	2 cut(s)	287, 1966
SphI	GCATGC	2 cut(s)	1098, 2217
Sse9I	AATT	6 cut(s)	415, 759, 1274, 1757, 1868, 1955
SseBI	AGGCCT	2 cut(s)	1438, 2066
SsiI	CCGC	6 cut(s)	371, 459, 1049, 1112, 1145, 2038
SspMI	CTAG	2 cut(s)	1469, 1709
StuI	AGGCCT	2 cut(s)	1438, 2066
StyD4I	CCNGG	1 cut(s)	325
StyI	CCWWGG	4 cut(s)	548, 1666, 1686, 2067
TaaI	ACNGT	4 cut(s)	394, 468, 953, 1984
TaiI	ACGT	3 cut(s)	588, 1041, 2210
TaqI	TCGA	5 cut(s)	657, 1177, 1302, 1368, 1851
TasI	AATT	6 cut(s)	415, 759, 1274, 1757, 1868, 1955
TatI	WGTACW	5 cut(s)	41, 147, 1250, 1977, 2184
TauI	GCSGC	2 cut(s)	373, 1148
TfiI	GAWTC	4 cut(s)	659, 700, 1283, 1824
Tru1I	TTAA	5 cut(s)	387, 588, 732, 1928, 2007
Tru9I	TTAA	5 cut(s)	387, 588, 732, 1928, 2007
TscAI	CASTG	6 cut(s)	355, 397, 903, 1987, 2133, 2158
TseFI	GTSAC	4 cut(s)	268, 953, 1102, 1912
Tsp45I	GTSAC	4 cut(s)	268, 953, 1102, 1912
TspRI	CASTG	6 cut(s)	355, 397, 903, 1987, 2133, 2158
Van91I	CCANNNNNTGG	2 cut(s)	513, 1276
VpaK11BI	GGWCC	2 cut(s)	605, 2071
XapI	RAATTY	2 cut(s)	1757, 1955
XceI	RCATGY	5 cut(s)	841, 961, 1098, 1513, 2217
XmiI	GTMKAC	1 cut(s)	834
XmnI	GAANNNNTTC	1 cut(s)	1828
XspI	CTAG	2 cut(s)	1469, 1709
ZrmI	AGTACT	2 cut(s)	43, 1252
Zsp2I	ATGCAT	2 cut(s)	1096, 1744

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.