Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000184.1

Orthogroup ID

OG0000273

Physical Location & Seq

Genomic Coordinates Reverse (-)

46105 .. 53066

Gene Structure 6962 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000184.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2316 bp

atgggggagcgagggatcagttcaccattgttcgagacgaagagggccaaggggatagttctgtataggctttttgctgcgtctattttcgtgggtatatgtttcatctgggtttacaggttgagtcatgtaccaaaagctggagaagatggaaggtttggttggatgggtctgctgggtgctgagttatggttcgggttttactggctcttcactcaagcctgccgctggaaccgcgtgtatcggcacaccttcagggacaggctctcggagagatatgaggatgagttgccgggagtggacatattcgtgtgcacggcagacccaactatagagccgccgacgatggtgataaacactgttttatcagtaatggcttatgattacccaccggagaagctcagcgtgtatctatccgatgatggcggatccgaacttacatgttatgctctattggaagctgctgagtttgctaagcattggataccatattgcaagaagtacaatgtggagccaaggtcacctgctgcttattttgcctcactagcttctgataatgcaggggatttcactctcattaaggtgaaggaagtccgagacgagactatcaacttcacccagcaaggagcttggaagcccaacacgaggtggaggaagcccgacgtgaggccatcagttccccccaagaaaggagcttggaagcccaacactaggtggaggaagcccaacatcaggaagcccgatgtgaagtcatcagttccacccaagaaaggagcttggaagcccaacattcggtggaggaagcccaacattcggtggaggaagtccgagactagactatcagtttcaccaaacaaggtagcttggaggcctagcattagatatgaggatgagttgccgggagtggacatattcatgtgcacggcagacccaactatagagccgccgacgatggtgataaacactgttttatcagtaatggcttatgattacccaccggagaagctcagcgtgtatctatccgatgatggcggatccgaacttacatgttatgctctattggaagctgctgagtttgctaagcattggataccatattgcaagaagtacaatgtggagccaaggtcacctgctgcttattttgcctcactagcttctgataatgcaggggatttcactctcattaagaaattatacaaagacatggagaataaaatcgaaattgcagtgaagttaggcagcatttctgaagaagtacgatcaaaacacagaggcttttctcagtgggattcgtattcatctccacgtgaccatgacaccattctacaaatagtaattgatgggagagatccaaatgcaagagatgttaaagggtgtggattgccaaccttagtgtatttggctcgcgagaagagaccccaatatcaccataacttcaaagccggagctatgaatgcactgattagggtatcttcaaacattagcaatgggaaggttattcttaatgtagactgtgatatgtattcaaacaactctaagaccattagggatgcactctgcttcttcctggatgaagaaaaaggccaggagattgcattcgtacagttcccacagaatttcgaaaatgttaccaagaatgaagccttcaacttggatattgctgctactgcctgtgggctccaaattgcttggcgacactattttactcaattctcccttcaatttaccttcttagaggcatttctgtattcccacagatcatccctccttctttatcaatctatcccaaatttttccagatctgactttatctccatgaactcttccacccaacacctcatatcaccactcctccctttacctgtgttttcttccatgaaagctttcatggttgctgttccaaaagtgaaaatcacttatctagacgagtatgggtgctcacgcatgggtttcatgaccaccattctccattgttacagtcctttgcttttcgattctgtcctacttcagtggcgtcggctctttcacagatggtgcatcattggtggagatgaggaaggtgcttccaggtgtggtatcagactttccatcccatgtcttagatatgctctttggggttttttgactacggagttactcggcggctttggccagcttggtgctgcttggtgcggcttgtatcggcttcgtgtagcttgtgttggctatgagcggcttcgtgcggcttctgtcgactacgtgcgtttttgttttttaaatgttatttttaggtttaatctcctcttattggctctatgtagctcagttggagattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

771

Amino Acids

88.12

Weight (kDa)

8.9

Isoelectric Point (pI)

44.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55850
fragaria_vesca	FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica	MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica	Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis	pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis	RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata	RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora	Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii	Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa	Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha	Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana	Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	532, 1138
Acc36I	ACCTGC	2 cut(s)	532, 1138
AccB7I	CCANNNNNTGG	1 cut(s)	140
AccBSI	CCGCTC	1 cut(s)	2212
AccI	GTMKAC	2 cut(s)	1509, 2232
AccII	CGCG	2 cut(s)	237, 1407
AclWI	GGATC	6 cut(s)	23, 423, 436, 1029, 1042, 1343
AcoI	YGGCCR	1 cut(s)	2149
AcsI	RAATTY	2 cut(s)	1615, 1789
AcuI	CTGAAG	3 cut(s)	238, 1269, 1991
AcvI	CACGTG	1 cut(s)	1307
AcyI	GRCGYC	1 cut(s)	2014
AdeI	CACNNNGTG	2 cut(s)	648, 714
AfaI	GTAC	5 cut(s)	132, 503, 1109, 1257, 1602
AflIII	ACRYGT	2 cut(s)	440, 1046
AgsI	TTSAA	5 cut(s)	1438, 1476, 1527, 1648, 1721
AjiI	CACGTC	1 cut(s)	664
AjnI	CCWGG	3 cut(s)	1566, 1584, 2066
AjuI	GAANNNNNNNTTGG	2 cut(s)	145, 177
Alw21I	GWGCWC	3 cut(s)	317, 923, 1940
Alw26I	GTCTC	5 cut(s)	29, 591, 596, 824, 1408
Alw44I	GTGCAC	2 cut(s)	313, 919
AlwI	GGATC	6 cut(s)	23, 423, 436, 1029, 1042, 1343
AoxI	GGCC	5 cut(s)	45, 668, 869, 1582, 2149
ApaLI	GTGCAC	2 cut(s)	313, 919
ApeKI	GCWGC	8 cut(s)	77, 461, 527, 1067, 1133, 1239, 1661, 2162
ApoI	RAATTY	2 cut(s)	1615, 1789
Asp700I	GAANNNNTTC	1 cut(s)	1883
AspS9I	GGNCC	1 cut(s)	45
AsuC2I	CCSGG	2 cut(s)	294, 900
AsuII	TTCGAA	1 cut(s)	1620
BaeGI	GKGCMC	2 cut(s)	317, 923
BalI	TGGCCA	1 cut(s)	2151
BamHI	GGATCC	2 cut(s)	428, 1034
BanII	GRGCYC	1 cut(s)	1680
BauI	CACGAG	1 cut(s)	643
BbrPI	CACGTG	1 cut(s)	1307
Bbv12I	GWGCWC	3 cut(s)	317, 923, 1940
BbvI	GCAGC	8 cut(s)	64, 448, 514, 1054, 1120, 1251, 1648, 2149
BceAI	ACGGC	2 cut(s)	333, 939
BciT130I	CCWGG	3 cut(s)	1568, 1586, 2068
BciVI	GTATCC	2 cut(s)	477, 1083
BcnI	CCSGG	2 cut(s)	294, 900
BcoDI	GTCTC	5 cut(s)	29, 591, 596, 824, 1408
BfaI	CTAG	6 cut(s)	545, 711, 834, 873, 1151, 1922
BfmI	CTRYAG	2 cut(s)	330, 936
BfuAI	ACCTGC	2 cut(s)	532, 1138
BfuI	GTATCC	2 cut(s)	477, 1083
BglII	AGATCT	1 cut(s)	1799
BlpI	GCTNAGC	4 cut(s)	401, 474, 1007, 1080
Bme1390I	CCNGG	5 cut(s)	294, 900, 1568, 1586, 2068
BmgBI	CACGTC	1 cut(s)	664
BmgT120I	GGNCC	1 cut(s)	45
BmiI	GGNNCC	6 cut(s)	233, 430, 513, 1036, 1119, 1679
BmrFI	CCNGG	5 cut(s)	294, 900, 1568, 1586, 2068
BmsI	GCATC	2 cut(s)	1540, 2046
BpmI	CTGGAG	1 cut(s)	162
Bpu1102I	GCTNAGC	4 cut(s)	401, 474, 1007, 1080
Bpu14I	TTCGAA	1 cut(s)	1620
BpuEI	CTTGAG	1 cut(s)	201
BpuMI	CCSGG	2 cut(s)	294, 900
BsaAI	YACGTR	2 cut(s)	1307, 2239
BsaHI	GRCGYC	1 cut(s)	2014
BsaI	GGTCTC	1 cut(s)	1408
BsaJI	CCNNGG	3 cut(s)	48, 515, 1121
BsaWI	WCCGGW	2 cut(s)	391, 997
BsaXI	ACNNNNNCTCC	8 cut(s)	503, 533, 1109, 1139, 1796, 1826, 1836, 1866
Bse1I	ACTGG	1 cut(s)	209
Bse3DI	GCAATG	1 cut(s)	1492
BseBI	CCWGG	3 cut(s)	1568, 1586, 2068
BseDI	CCNNGG	3 cut(s)	48, 515, 1121
BseGI	GGATG	7 cut(s)	171, 289, 895, 1555, 1576, 1760, 2088
BseMI	GCAATG	1 cut(s)	1492
BseMII	CTCAG	7 cut(s)	174, 415, 456, 1021, 1062, 1295, 2316
BseNI	ACTGG	1 cut(s)	209
BseRI	GAGGAG	2 cut(s)	1841, 2270
BseSI	GKGCMC	2 cut(s)	317, 923
BseXI	GCAGC	8 cut(s)	64, 448, 514, 1054, 1120, 1251, 1648, 2149
BseYI	CCCAGC	2 cut(s)	175, 618
Bsh1236I	CGCG	2 cut(s)	237, 1407
BshFI	GGCC	5 cut(s)	47, 670, 871, 1584, 2151
BsiHKAI	GWGCWC	3 cut(s)	317, 923, 1940
BsiSI	CCGG	5 cut(s)	293, 392, 899, 998, 1443
BslFI	GGGAC	1 cut(s)	272
BsmAI	GTCTC	5 cut(s)	29, 591, 596, 824, 1408
BsmBI	CGTCTC	2 cut(s)	29, 591
BsmFI	GGGAC	1 cut(s)	272
BsmI	GAATGC	2 cut(s)	1459, 1595
BsnI	GGCC	5 cut(s)	47, 670, 871, 1584, 2151
Bso31I	GGTCTC	1 cut(s)	1408
Bsp119I	TTCGAA	1 cut(s)	1620
Bsp1286I	GDGCHC	4 cut(s)	317, 923, 1680, 1940
Bsp143I	GATC	7 cut(s)	15, 428, 1034, 1259, 1348, 1757, 1799
Bsp1720I	GCTNAGC	4 cut(s)	401, 474, 1007, 1080
Bsp68I	TCGCGA	1 cut(s)	1407
BspANI	GGCC	5 cut(s)	47, 670, 871, 1584, 2151
BspCNI	CTCAG	7 cut(s)	175, 414, 457, 1020, 1063, 1294, 2315
BspFNI	CGCG	2 cut(s)	237, 1407
BspHI	TCATGA	1 cut(s)	1953
BspLI	GGNNCC	6 cut(s)	233, 430, 513, 1036, 1119, 1679
BspMI	ACCTGC	2 cut(s)	532, 1138
BspPI	GGATC	6 cut(s)	23, 423, 436, 1029, 1042, 1343
BspQI	GCTCTTC	1 cut(s)	215
BspT104I	TTCGAA	1 cut(s)	1620
BspTNI	GGTCTC	1 cut(s)	1408
BsrBI	CCGCTC	1 cut(s)	2212
BsrDI	GCAATG	1 cut(s)	1492
BsrI	ACTGG	1 cut(s)	209
BssECI	CCNNGG	3 cut(s)	48, 515, 1121
BssMI	GATC	7 cut(s)	15, 428, 1034, 1259, 1348, 1757, 1799
BssNI	GRCGYC	1 cut(s)	2014
BssSI	CACGAG	1 cut(s)	643
BssT1I	CCWWGG	3 cut(s)	48, 515, 1121
Bst2BI	CACGAG	1 cut(s)	643
Bst2UI	CCWGG	3 cut(s)	1568, 1586, 2068
Bst4CI	ACNGT	5 cut(s)	361, 967, 1514, 1605, 1979
Bst6I	CTCTTC	4 cut(s)	35, 215, 1406, 1828
BstACI	GRCGYC	1 cut(s)	2014
BstBAI	YACGTR	2 cut(s)	1307, 2239
BstBI	TTCGAA	1 cut(s)	1620
BstC8I	GCNNGC	3 cut(s)	223, 1405, 2153
BstEII	GGTNACC	2 cut(s)	519, 1125
BstF5I	GGATG	7 cut(s)	171, 289, 895, 1555, 1576, 1760, 2088
BstFNI	CGCG	2 cut(s)	237, 1407
BstKTI	GATC	7 cut(s)	18, 431, 1037, 1262, 1351, 1760, 1802
BstMAI	GTCTC	5 cut(s)	29, 591, 596, 824, 1408
BstMBI	GATC	7 cut(s)	15, 428, 1034, 1259, 1348, 1757, 1799
BstNI	CCWGG	3 cut(s)	1568, 1586, 2068
BstNSI	RCATGY	2 cut(s)	444, 1050
BstPI	GGTNACC	2 cut(s)	519, 1125
BstSCI	CCNGG	5 cut(s)	292, 898, 1566, 1584, 2066
BstSFI	CTRYAG	2 cut(s)	330, 936
BstSLI	GKGCMC	2 cut(s)	317, 923
BstUI	CGCG	2 cut(s)	237, 1407
BstV1I	GCAGC	8 cut(s)	64, 448, 514, 1054, 1120, 1251, 1648, 2149
BstX2I	RGATCY	4 cut(s)	428, 1034, 1348, 1799
BstYI	RGATCY	4 cut(s)	428, 1034, 1348, 1799
BsuI	GTATCC	2 cut(s)	477, 1083
BsuRI	GGCC	5 cut(s)	47, 670, 871, 1584, 2151
BtrI	CACGTC	1 cut(s)	664
BtsCI	GGATG	7 cut(s)	171, 289, 895, 1555, 1576, 1760, 2088
BtsI	GCAGTG	1 cut(s)	1233
BtsIMutI	CAGTG	6 cut(s)	357, 963, 1233, 1289, 1457, 2015
BtuMI	TCGCGA	1 cut(s)	1407
BveI	ACCTGC	2 cut(s)	532, 1138
Cac8I	GCNNGC	3 cut(s)	223, 1405, 2153
CciI	TCATGA	1 cut(s)	1953
Cfr13I	GGNCC	1 cut(s)	45
CseI	GACGC	2 cut(s)	69, 2003
Csp6I	GTAC	5 cut(s)	131, 502, 1108, 1256, 1601
CviQI	GTAC	5 cut(s)	131, 502, 1108, 1256, 1601
DpnI	GATC	7 cut(s)	17, 430, 1036, 1261, 1350, 1759, 1801
DpnII	GATC	7 cut(s)	15, 428, 1034, 1259, 1348, 1757, 1799
DraI	TTTAAA	1 cut(s)	2256
DraIII	CACNNNGTG	2 cut(s)	648, 714
EaeI	YGGCCR	1 cut(s)	2149
Eam1104I	CTCTTC	4 cut(s)	35, 215, 1406, 1828
EarI	CTCTTC	4 cut(s)	35, 215, 1406, 1828
EciI	GGCGGA	2 cut(s)	441, 1047
Eco130I	CCWWGG	3 cut(s)	48, 515, 1121
Eco147I	AGGCCT	1 cut(s)	871
Eco24I	GRGCYC	1 cut(s)	1680
Eco31I	GGTCTC	1 cut(s)	1408
Eco57I	CTGAAG	3 cut(s)	238, 1269, 1991
Eco72I	CACGTG	1 cut(s)	1307
Eco91I	GGTNACC	2 cut(s)	519, 1125
EcoO65I	GGTNACC	2 cut(s)	519, 1125
EcoRII	CCWGG	3 cut(s)	1566, 1584, 2066
EcoT14I	CCWWGG	3 cut(s)	48, 515, 1121
EcoT38I	GRGCYC	1 cut(s)	1680
ErhI	CCWWGG	3 cut(s)	48, 515, 1121
Esp3I	CGTCTC	2 cut(s)	29, 591
FaqI	GGGAC	1 cut(s)	272
FblI	GTMKAC	2 cut(s)	1509, 2232
FokI	GGATG	7 cut(s)	178, 296, 902, 1562, 1583, 1747, 2075
FriOI	GRGCYC	1 cut(s)	1680
FspBI	CTAG	6 cut(s)	545, 711, 834, 873, 1151, 1922
GsaI	CCCAGC	2 cut(s)	179, 622
GsuI	CTGGAG	1 cut(s)	162
HaeIII	GGCC	5 cut(s)	47, 670, 871, 1584, 2151
HapII	CCGG	5 cut(s)	293, 392, 899, 998, 1443
HgaI	GACGC	2 cut(s)	69, 2003
Hin1I	GRCGYC	1 cut(s)	2014
HincII	GTYRAC	1 cut(s)	2233
HindII	GTYRAC	1 cut(s)	2233
HindIII	AAGCTT	1 cut(s)	1881
HinfI	GANTC	3 cut(s)	124, 1289, 1994
HpaII	CCGG	5 cut(s)	293, 392, 899, 998, 1443
Hpy166II	GTNNAC	8 cut(s)	23, 115, 301, 315, 907, 921, 1510, 2233
Hpy188III	TCNNGA	6 cut(s)	34, 733, 1406, 1797, 1922, 1954
Hpy8I	GTNNAC	8 cut(s)	23, 115, 301, 315, 907, 921, 1510, 2233
Hpy99I	CGWCG	4 cut(s)	346, 665, 952, 2019
HpyAV	CCTTC	9 cut(s)	147, 262, 580, 1486, 1654, 1727, 1738, 1778, 2051
HpyCH4III	ACNGT	5 cut(s)	361, 967, 1514, 1605, 1979
HpyCH4IV	ACGT	3 cut(s)	663, 1306, 2238
HpySE526I	ACGT	3 cut(s)	663, 1306, 2238
Hsp92I	GRCGYC	1 cut(s)	2014
Kzo9I	GATC	7 cut(s)	15, 428, 1034, 1259, 1348, 1757, 1799
LguI	GCTCTTC	1 cut(s)	215
LmnI	GCTCC	8 cut(s)	7, 511, 626, 692, 773, 1117, 1445, 1683
Lsp1109I	GCAGC	8 cut(s)	64, 448, 514, 1054, 1120, 1251, 1648, 2149
LweI	GCATC	2 cut(s)	1540, 2046
MaeI	CTAG	6 cut(s)	545, 711, 834, 873, 1151, 1922
MaeII	ACGT	3 cut(s)	663, 1306, 2238
MaeIII	GTNAC	6 cut(s)	519, 1125, 1307, 1627, 1973, 2133
MalI	GATC	7 cut(s)	17, 430, 1036, 1261, 1350, 1759, 1801
MbiI	CCGCTC	1 cut(s)	2212
MboI	GATC	7 cut(s)	15, 428, 1034, 1259, 1348, 1757, 1799
MflI	RGATCY	4 cut(s)	428, 1034, 1348, 1799
MhlI	GDGCHC	4 cut(s)	317, 923, 1680, 1940
MlsI	TGGCCA	1 cut(s)	2151
MluCI	AATT	8 cut(s)	1190, 1221, 1335, 1615, 1683, 1709, 1721, 1789
MluNI	TGGCCA	1 cut(s)	2151
MlyI	GAGTC	1 cut(s)	133
MmeI	TCCRAC	2 cut(s)	143, 2287
Mox20I	TGGCCA	1 cut(s)	2151
MroXI	GAANNNNTTC	1 cut(s)	1883
MscI	TGGCCA	1 cut(s)	2151
MseI	TTAA	7 cut(s)	579, 1185, 1368, 1503, 2255, 2274, 2314
MslI	CAYNNNNRTG	3 cut(s)	308, 581, 914
Msp20I	TGGCCA	1 cut(s)	2151
MspA1I	CMGCKG	1 cut(s)	228
MspI	CCGG	5 cut(s)	293, 392, 899, 998, 1443
MspR9I	CCNGG	5 cut(s)	294, 900, 1568, 1586, 2068
Mva1269I	GAATGC	2 cut(s)	1459, 1595
MvaI	CCWGG	3 cut(s)	1568, 1586, 2068
MvnI	CGCG	2 cut(s)	237, 1407
NciI	CCSGG	2 cut(s)	294, 900
NdeII	GATC	7 cut(s)	15, 428, 1034, 1259, 1348, 1757, 1799
NlaIV	GGNNCC	6 cut(s)	233, 430, 513, 1036, 1119, 1679
NmeAIII	GCCGAG	1 cut(s)	2118
NmuCI	GTSAC	3 cut(s)	519, 1125, 1307
NruI	TCGCGA	1 cut(s)	1407
NspI	RCATGY	2 cut(s)	444, 1050
NspV	TTCGAA	1 cut(s)	1620
PagI	TCATGA	1 cut(s)	1953
PaqCI	CACCTGC	2 cut(s)	532, 1138
PceI	AGGCCT	1 cut(s)	871
PciI	ACATGT	2 cut(s)	440, 1046
PciSI	GCTCTTC	1 cut(s)	215
PctI	GAATGC	2 cut(s)	1459, 1595
PdmI	GAANNNNTTC	1 cut(s)	1883
PfeI	GAWTC	2 cut(s)	1289, 1994
PflMI	CCANNNNNTGG	1 cut(s)	140
PfoI	TCCNGGA	1 cut(s)	1566
PleI	GAGTC	1 cut(s)	132
PmaCI	CACGTG	1 cut(s)	1307
PmlI	CACGTG	1 cut(s)	1307
PpsI	GAGTC	1 cut(s)	132
Ppu21I	YACGTR	2 cut(s)	1307, 2239
PscI	ACATGT	2 cut(s)	440, 1046
Psp6I	CCWGG	3 cut(s)	1566, 1584, 2066
PspCI	CACGTG	1 cut(s)	1307
PspEI	GGTNACC	2 cut(s)	519, 1125
PspFI	CCCAGC	2 cut(s)	175, 618
PspGI	CCWGG	3 cut(s)	1566, 1584, 2066
PspN4I	GGNNCC	6 cut(s)	233, 430, 513, 1036, 1119, 1679
PspPI	GGNCC	1 cut(s)	45
PsuI	RGATCY	4 cut(s)	428, 1034, 1348, 1799
RruI	TCGCGA	1 cut(s)	1407
RsaI	GTAC	5 cut(s)	132, 503, 1109, 1257, 1602
RsaNI	GTAC	5 cut(s)	131, 502, 1108, 1256, 1601
RseI	CAYNNNNRTG	3 cut(s)	308, 581, 914
SalI	GTCGAC	1 cut(s)	2231
SapI	GCTCTTC	1 cut(s)	215
SaqAI	TTAA	7 cut(s)	579, 1185, 1368, 1503, 2255, 2274, 2314
Sau3AI	GATC	7 cut(s)	15, 428, 1034, 1259, 1348, 1757, 1799
Sau96I	GGNCC	1 cut(s)	45
SchI	GAGTC	1 cut(s)	133
ScrFI	CCNGG	5 cut(s)	294, 900, 1568, 1586, 2068
SduI	GDGCHC	4 cut(s)	317, 923, 1680, 1940
SfaNI	GCATC	2 cut(s)	1540, 2046
SfcI	CTRYAG	2 cut(s)	330, 936
SfuI	TTCGAA	1 cut(s)	1620
SmiMI	CAYNNNNRTG	3 cut(s)	308, 581, 914
SmlI	CTYRAG	1 cut(s)	216
SmoI	CTYRAG	1 cut(s)	216
Sse9I	AATT	8 cut(s)	1190, 1221, 1335, 1615, 1683, 1709, 1721, 1789
SseBI	AGGCCT	1 cut(s)	871
SspMI	CTAG	6 cut(s)	545, 711, 834, 873, 1151, 1922
StuI	AGGCCT	1 cut(s)	871
StyD4I	CCNGG	5 cut(s)	292, 898, 1566, 1584, 2066
StyI	CCWWGG	3 cut(s)	48, 515, 1121
TaaI	ACNGT	5 cut(s)	361, 967, 1514, 1605, 1979
TaiI	ACGT	3 cut(s)	666, 1309, 2241
TaqI	TCGA	5 cut(s)	33, 1218, 1620, 1992, 2232
TasI	AATT	8 cut(s)	1190, 1221, 1335, 1615, 1683, 1709, 1721, 1789
TatI	WGTACW	2 cut(s)	501, 1107
TauI	GCSGC	7 cut(s)	228, 340, 946, 2145, 2175, 2215, 2225
TfiI	GAWTC	2 cut(s)	1289, 1994
Tru1I	TTAA	7 cut(s)	579, 1185, 1368, 1503, 2255, 2274, 2314
Tru9I	TTAA	7 cut(s)	579, 1185, 1368, 1503, 2255, 2274, 2314
TscAI	CASTG	6 cut(s)	364, 970, 1233, 1289, 1464, 2015
TseFI	GTSAC	3 cut(s)	519, 1125, 1307
TseI	GCWGC	8 cut(s)	77, 461, 527, 1067, 1133, 1239, 1661, 2162
Tsp45I	GTSAC	3 cut(s)	519, 1125, 1307
TspGWI	ACGGA	1 cut(s)	2144
TspRI	CASTG	6 cut(s)	364, 970, 1233, 1289, 1464, 2015
Van91I	CCANNNNNTGG	1 cut(s)	140
VneI	GTGCAC	2 cut(s)	313, 919
XapI	RAATTY	2 cut(s)	1615, 1789
XbaI	TCTAGA	1 cut(s)	1921
XceI	RCATGY	2 cut(s)	444, 1050
XmiI	GTMKAC	2 cut(s)	1509, 2232
XmnI	GAANNNNTTC	1 cut(s)	1883
XspI	CTAG	6 cut(s)	545, 711, 834, 873, 1151, 1922

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.