Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004655.1

Orthogroup ID

OG0000273

Physical Location & Seq

Genomic Coordinates Reverse (-)

36885 .. 42812

Gene Structure 5928 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004655.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2289 bp

atgggagaggaaagatatttaccactgtttgagacaacgagagcaaatggaagagtcctatacaggttatttgcagtgtctgtttttgttggtatatgtttgatatgggtatatagagtgactcacataccgacagctggagaagatggaagatttggttggatgtgtttgttcgctgctgagttatggttcagcttttactgggtcgtcactcaagccactcggtggagccgcatctacagacacaccttcaaggacaggctttctcaaagatatgagaaagaactgccgggggtggacatatttgtgtgcaccgcggatccaatcatagagccaccgatgatggtgatgaacaccgttttgtcggtcctggcttacgactacccaccggagaagctcagcgtgtatctctccgacgatggtggctcagaactaacatactatgctctactagaagctgctgagtttgctaagcactggataccacattgcaagaagtacagtgtggaaccaaggtcgccggctgcttatttcgtttcaacagcttctgatgcggttggtgatcaaagtcagaatcagaatcgagctggtgatgtggctctcattaagaaattatacgagaacatggagaataaaattgaaaatgcagtgaagctaggccgcatttcagaagaagtacgatcaaagcataaaggtttttctcagtggaactcatattcatcaaagctagaccatgataccattcttcaaatagtagttgatgggagaaacccaaatgcaagagatgttgaaggatgtatgttgccaactttggtgtatttggctcgggagaagagaccccagtaccaccataacttcaaagctggcgctatgaatgcactgattagggtatcatcgagcattagcaatgggaagttacttcttaatgtagattgtgatatgtattcgaacaactccatggccataagggatgcactttgcttctttatggatgaagaacaaggccatgagatcgcatatgtacagttcccacagaatttcgacaaccttactaagaatgaattatacgcttcattaaaagtaattaacgaggtggaagcccatggtctggataattattgggggatattatatattggaagtggatgctttcacagaagagaagttctttgtggcaatatattcagcaagcgttgtaggagtgaaatgaaatgggagggtaaaaaaggagaagaaattgtcattcatgacttggaagaaacttcaaagagtcttgcaagttgtgcatttgaagagaacactcagtggggaaaagagtttggcttcattaaattggccatcggaagtttccgattgaattattgtcaagtgtccgatgtgggtcttggattgttatgtgattggtcaagtttagggacttgtgacccgatttccaatgtggaattgggtttgtcaattaattccacgtgcatacctagagctagatcgcacgtgagggggcgtgttggagaggaaagatcccacattggaaaaaggtggaacgaccaacgtatatggctttaccagagaataacatcatacctatttgccttcatcgacaccattgtacactaccttggatacacagattcagcatttgtaataacagccaaggtggtggatgaagatgtgtccgaacggtataagaaagagatcatggaatttggcggatcgtctccaatgtttaccatactggcaacactagcattgctcaacttgtactgctttgccgggtttgtgcaggcagcagtcgctggaacaattggctttgcagaagtttatgagacaatgtgcttgcagattcttctatgtggggttttgattgtcattaacctaccgttgtacgaagccctatacctaaggaaggacaaggggaagctgccaagctctgtagcagttaagtcaatgacatttgctggatttgcttgtcacagcatgccgacacccgcctgcgcggccccccccccccccctcgcacacctagcctacatcaccggccttcatcttgatccggcgacagcaacatccccgcgccagcacccatcgctgctgcagcaacccagctggcaaactcgctcctgcccacccgaccagcctgcgccgatccctgcagcaccagaattcggcgaccagacctcaccagctcctcacactccgaccagcaggctttttcgacccagacccgacgatctccggtgcatttccgacccagactcgttgaagaacgacgaacgagatttcagcgactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

762

Amino Acids

85.96

Weight (kDa)

6.03

Isoelectric Point (pI)

42.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55850
fragaria_vesca	FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica	MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica	Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis	pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis	RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata	RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora	Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii	Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa	Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha	Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana	Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	225, 1108
AccII	CGCG	3 cut(s)	317, 1994, 2071
AciI	CCGC	9 cut(s)	232, 315, 317, 554, 661, 1707, 1986, 1994, 2069
AclWI	GGATC	6 cut(s)	314, 327, 1512, 1717, 2042, 2137
AcoI	YGGCCR	2 cut(s)	960, 1335
AcsI	RAATTY	3 cut(s)	1036, 1700, 2159
AcvI	CACGTG	2 cut(s)	1467, 1492
AdeI	CACNNNGTG	2 cut(s)	225, 1305
AfaI	GTAC	7 cut(s)	500, 678, 845, 1023, 1608, 1760, 1883
AfiI	CCNNNNNNNGG	5 cut(s)	137, 225, 1108, 1903, 2162
AjnI	CCWGG	1 cut(s)	369
AjuI	GAANNNNNNNTTGG	2 cut(s)	142, 174
Alw21I	GWGCWC	1 cut(s)	314
Alw26I	GTCTC	4 cut(s)	26, 829, 1719, 1817
Alw44I	GTGCAC	1 cut(s)	310
AlwI	GGATC	6 cut(s)	314, 327, 1512, 1717, 2042, 2137
AlwNI	CAGNNNCTG	3 cut(s)	80, 548, 1793
Ama87I	CYCGRG	1 cut(s)	825
AoxI	GGCC	6 cut(s)	658, 960, 1003, 1335, 1995, 2035
ApaLI	GTGCAC	1 cut(s)	310
ApeKI	GCWGC	9 cut(s)	176, 458, 524, 1784, 1918, 2086, 2089, 2092, 2150
ApoI	RAATTY	3 cut(s)	1036, 1700, 2159
AseI	ATTAAT	1 cut(s)	1458
AspLEI	GCGC	4 cut(s)	869, 1994, 2073, 2140
AspS9I	GGNCC	2 cut(s)	367, 1996
AsuC2I	CCSGG	2 cut(s)	291, 1771
AsuHPI	GGTGA	5 cut(s)	358, 572, 602, 2023, 2169
AsuII	TTCGAA	1 cut(s)	947
AvaI	CYCGRG	1 cut(s)	825
AvaII	GGWCC	1 cut(s)	367
AxyI	CCTNAGG	1 cut(s)	1898
BaeGI	GKGCMC	1 cut(s)	314
BaeI	ACNNNNGTAYC	2 cut(s)	827, 860
BalI	TGGCCA	2 cut(s)	962, 1337
BamHI	GGATCC	1 cut(s)	319
BbrPI	CACGTG	2 cut(s)	1467, 1492
Bbv12I	GWGCWC	1 cut(s)	314
BbvI	GCAGC	9 cut(s)	163, 445, 511, 1796, 1905, 2073, 2076, 2104, 2162
BccI	CCATC	6 cut(s)	140, 337, 413, 755, 1346, 2089
BcgI	CGANNNNNNTGC	2 cut(s)	2117, 2151
BciT130I	CCWGG	1 cut(s)	371
BciVI	GTATCC	2 cut(s)	474, 1613
BclI	TGATCA	1 cut(s)	562
BcnI	CCSGG	2 cut(s)	291, 1771
BcoDI	GTCTC	4 cut(s)	26, 829, 1719, 1817
BfaI	CTAG	7 cut(s)	452, 656, 728, 1476, 1482, 1742, 2021
BfmI	CTRYAG	4 cut(s)	238, 1929, 2090, 2148
BfoI	RGCGCY	1 cut(s)	870
BfuI	GTATCC	2 cut(s)	474, 1613
BglI	GCCNNNNNGGC	1 cut(s)	1994
BlpI	GCTNAGC	2 cut(s)	398, 471
Bme1390I	CCNGG	3 cut(s)	291, 371, 1771
Bme18I	GGWCC	1 cut(s)	367
BmeT110I	CYCGRG	1 cut(s)	825
BmgT120I	GGNCC	2 cut(s)	367, 1996
BmiI	GGNNCC	4 cut(s)	230, 321, 510, 1998
BmrFI	CCNGG	3 cut(s)	291, 371, 1771
BmrI	ACTGGG	2 cut(s)	211, 835
BmsI	GCATC	4 cut(s)	243, 541, 961, 1136
BmuI	ACTGGG	2 cut(s)	211, 835
BpmI	CTGGAG	1 cut(s)	159
Bpu1102I	GCTNAGC	2 cut(s)	398, 471
Bpu14I	TTCGAA	1 cut(s)	947
BpuEI	CTTGAG	1 cut(s)	198
BpuMI	CCSGG	2 cut(s)	291, 1771
BsaAI	YACGTR	2 cut(s)	1467, 1492
BsaI	GGTCTC	1 cut(s)	829
BsaJI	CCNNGG	7 cut(s)	290, 315, 512, 957, 1102, 1615, 1650
BsaWI	WCCGGW	2 cut(s)	388, 2232
Bsc4I	CCNNNNNNNGG	5 cut(s)	137, 225, 1108, 1903, 2162
Bse118I	RCCGGY	2 cut(s)	520, 2033
Bse1I	ACTGG	4 cut(s)	206, 482, 841, 1737
Bse21I	CCTNAGG	1 cut(s)	1898
Bse3DI	GCAATG	3 cut(s)	487, 913, 1745
BseBI	CCWGG	1 cut(s)	371
BseDI	CCNNGG	7 cut(s)	290, 315, 512, 957, 1102, 1615, 1650
BseGI	GGATG	7 cut(s)	168, 800, 976, 997, 1151, 1666, 2063
BseLI	CCNNNNNNNGG	5 cut(s)	137, 225, 1108, 1903, 2162
BseMI	GCAATG	3 cut(s)	487, 913, 1745
BseMII	CTCAG	6 cut(s)	171, 412, 441, 453, 716, 1316
BseNI	ACTGG	4 cut(s)	206, 482, 841, 1737
BseRI	GAGGAG	1 cut(s)	2175
BseSI	GKGCMC	1 cut(s)	314
BseXI	GCAGC	9 cut(s)	163, 445, 511, 1796, 1905, 2073, 2076, 2104, 2162
BseYI	CCCAGC	1 cut(s)	2099
BsgI	GTGCAG	1 cut(s)	1799
Bsh1236I	CGCG	3 cut(s)	317, 1994, 2071
BshFI	GGCC	6 cut(s)	660, 962, 1005, 1337, 1997, 2037
BsiHKAI	GWGCWC	1 cut(s)	314
BsiHKCI	CYCGRG	1 cut(s)	825
BsiSI	CCGG	7 cut(s)	290, 389, 521, 1770, 2034, 2051, 2233
BslFI	GGGAC	1 cut(s)	1429
BslI	CCNNNNNNNGG	5 cut(s)	137, 225, 1108, 1903, 2162
BsmAI	GTCTC	4 cut(s)	26, 829, 1719, 1817
BsmBI	CGTCTC	1 cut(s)	1719
BsmFI	GGGAC	1 cut(s)	1429
BsmI	GAATGC	1 cut(s)	880
BsnI	GGCC	6 cut(s)	660, 962, 1005, 1337, 1997, 2037
Bso31I	GGTCTC	1 cut(s)	829
BsoBI	CYCGRG	1 cut(s)	825
Bsp119I	TTCGAA	1 cut(s)	947
Bsp1286I	GDGCHC	1 cut(s)	314
Bsp1407I	TGTACA	2 cut(s)	1021, 1606
Bsp1720I	GCTNAGC	2 cut(s)	398, 471
Bsp19I	CCATGG	2 cut(s)	957, 1102
BspACI	CCGC	9 cut(s)	232, 315, 317, 554, 661, 1707, 1986, 1994, 2069
BspANI	GGCC	6 cut(s)	660, 962, 1005, 1337, 1997, 2037
BspCNI	CTCAG	6 cut(s)	172, 411, 440, 454, 715, 1315
BspFNI	CGCG	3 cut(s)	317, 1994, 2071
BspHI	TCATGA	1 cut(s)	1246
BspLI	GGNNCC	4 cut(s)	230, 321, 510, 1998
BspMAI	CTGCAG	2 cut(s)	2094, 2152
BspPI	GGATC	6 cut(s)	314, 327, 1512, 1717, 2042, 2137
BspT104I	TTCGAA	1 cut(s)	947
BspTNI	GGTCTC	1 cut(s)	829
BsrDI	GCAATG	3 cut(s)	487, 913, 1745
BsrFI	RCCGGY	2 cut(s)	520, 2033
BsrGI	TGTACA	2 cut(s)	1021, 1606
BsrI	ACTGG	4 cut(s)	206, 482, 841, 1737
BssAI	RCCGGY	2 cut(s)	520, 2033
BssECI	CCNNGG	7 cut(s)	290, 315, 512, 957, 1102, 1615, 1650
BssT1I	CCWWGG	5 cut(s)	512, 957, 1102, 1615, 1650
Bst2UI	CCWGG	1 cut(s)	371
Bst4CI	ACNGT	6 cut(s)	27, 358, 503, 1026, 1680, 1878
Bst6I	CTCTTC	4 cut(s)	46, 827, 1153, 1287
BstAPI	GCANNNNNTGC	1 cut(s)	1283
BstAUI	TGTACA	2 cut(s)	1021, 1606
BstBAI	YACGTR	2 cut(s)	1467, 1492
BstBI	TTCGAA	1 cut(s)	947
BstDEI	CTNAG	9 cut(s)	180, 398, 427, 462, 471, 702, 1053, 1302, 1898
BstDSI	CCRYGG	3 cut(s)	315, 957, 1102
BstENI	CCTNNNNNAGG	1 cut(s)	1901
BstF5I	GGATG	7 cut(s)	168, 800, 976, 997, 1151, 1666, 2063
BstFNI	CGCG	3 cut(s)	317, 1994, 2071
BstH2I	RGCGCY	1 cut(s)	870
BstHHI	GCGC	4 cut(s)	869, 1994, 2073, 2140
BstMAI	GTCTC	4 cut(s)	26, 829, 1719, 1817
BstNI	CCWGG	1 cut(s)	371
BstNSI	RCATGY	1 cut(s)	1978
BstSCI	CCNGG	3 cut(s)	289, 369, 1769
BstSFI	CTRYAG	4 cut(s)	238, 1929, 2090, 2148
BstSLI	GKGCMC	1 cut(s)	314
BstUI	CGCG	3 cut(s)	317, 1994, 2071
BstV1I	GCAGC	9 cut(s)	163, 445, 511, 1796, 1905, 2073, 2076, 2104, 2162
BstX2I	RGATCY	2 cut(s)	319, 1517
BstXI	CCANNNNNNTGG	1 cut(s)	1657
BstYI	RGATCY	2 cut(s)	319, 1517
Bsu36I	CCTNAGG	1 cut(s)	1898
BsuI	GTATCC	2 cut(s)	474, 1613
BsuRI	GGCC	6 cut(s)	660, 962, 1005, 1337, 1997, 2037
BtgI	CCRYGG	3 cut(s)	315, 957, 1102
BtgZI	GCGATG	1 cut(s)	2067
BtsCI	GGATG	7 cut(s)	168, 800, 976, 997, 1151, 1666, 2063
BtsI	GCAGTG	2 cut(s)	81, 654
BtsIMutI	CAGTG	8 cut(s)	23, 81, 475, 508, 654, 710, 878, 1310
CaiI	CAGNNNCTG	3 cut(s)	80, 548, 1793
CciI	TCATGA	1 cut(s)	1246
CfoI	GCGC	4 cut(s)	869, 1994, 2073, 2140
Cfr10I	RCCGGY	2 cut(s)	520, 2033
Cfr13I	GGNCC	2 cut(s)	367, 1996
Cfr42I	CCGCGG	1 cut(s)	318
Csp6I	GTAC	7 cut(s)	499, 677, 844, 1022, 1607, 1759, 1882
CviAII	CATG	8 cut(s)	625, 734, 958, 1007, 1103, 1247, 1696, 1975
CviQI	GTAC	7 cut(s)	499, 677, 844, 1022, 1607, 1759, 1882
DdeI	CTNAG	9 cut(s)	180, 398, 427, 462, 471, 702, 1053, 1302, 1898
DraIII	CACNNNGTG	2 cut(s)	225, 1305
EaeI	YGGCCR	2 cut(s)	960, 1335
Eam1104I	CTCTTC	4 cut(s)	46, 827, 1153, 1287
EarI	CTCTTC	4 cut(s)	46, 827, 1153, 1287
EciI	GGCGGA	1 cut(s)	1722
Eco130I	CCWWGG	5 cut(s)	512, 957, 1102, 1615, 1650
Eco31I	GGTCTC	1 cut(s)	829
Eco47I	GGWCC	1 cut(s)	367
Eco72I	CACGTG	2 cut(s)	1467, 1492
Eco81I	CCTNAGG	1 cut(s)	1898
Eco88I	CYCGRG	1 cut(s)	825
EcoNI	CCTNNNNNAGG	1 cut(s)	1901
EcoRI	GAATTC	1 cut(s)	2159
EcoRII	CCWGG	1 cut(s)	369
EcoT14I	CCWWGG	5 cut(s)	512, 957, 1102, 1615, 1650
ErhI	CCWWGG	5 cut(s)	512, 957, 1102, 1615, 1650
Esp3I	CGTCTC	1 cut(s)	1719
FaeI	CATG	8 cut(s)	628, 737, 961, 1010, 1106, 1250, 1699, 1978
FaqI	GGGAC	1 cut(s)	1429
FatI	CATG	8 cut(s)	624, 733, 957, 1006, 1102, 1246, 1695, 1974
FauI	CCCGC	2 cut(s)	1993, 2076
FauNDI	CATATG	1 cut(s)	1018
FbaI	TGATCA	1 cut(s)	562
FokI	GGATG	7 cut(s)	175, 807, 983, 1004, 1158, 1673, 2050
FspBI	CTAG	7 cut(s)	452, 656, 728, 1476, 1482, 1742, 2021
GlaI	GCGC	4 cut(s)	868, 1993, 2072, 2139
GsaI	CCCAGC	1 cut(s)	2103
GsuI	CTGGAG	1 cut(s)	159
HaeII	RGCGCY	1 cut(s)	870
HaeIII	GGCC	6 cut(s)	660, 962, 1005, 1337, 1997, 2037
HapII	CCGG	7 cut(s)	290, 389, 521, 1770, 2034, 2051, 2233
HhaI	GCGC	4 cut(s)	869, 1994, 2073, 2140
Hin1II	CATG	8 cut(s)	628, 737, 961, 1010, 1106, 1250, 1699, 1978
Hin6I	GCGC	4 cut(s)	867, 1992, 2071, 2138
HinP1I	GCGC	4 cut(s)	867, 1992, 2071, 2138
HinfI	GANTC	8 cut(s)	54, 121, 574, 580, 1270, 1628, 1840, 2252
HpaII	CCGG	7 cut(s)	290, 389, 521, 1770, 2034, 2051, 2233
HphI	GGTGA	5 cut(s)	358, 572, 602, 2023, 2169
Hpy166II	GTNNAC	4 cut(s)	298, 312, 1609, 1725
Hpy188III	TCNNGA	4 cut(s)	827, 1109, 1247, 2045
Hpy8I	GTNNAC	4 cut(s)	298, 312, 1609, 1725
Hpy99I	CGWCG	3 cut(s)	419, 2228, 2270
HpyAV	CCTTC	5 cut(s)	259, 785, 1600, 1897, 2048
HpyCH4III	ACNGT	6 cut(s)	27, 358, 503, 1026, 1680, 1878
HpyCH4IV	ACGT	3 cut(s)	1466, 1491, 1549
HpyF3I	CTNAG	9 cut(s)	180, 398, 427, 462, 471, 702, 1053, 1302, 1898
HpySE526I	ACGT	3 cut(s)	1466, 1491, 1549
Hsp92II	CATG	8 cut(s)	628, 737, 961, 1010, 1106, 1250, 1699, 1978
HspAI	GCGC	4 cut(s)	867, 1992, 2071, 2138
KroI	GCCGGC	1 cut(s)	520
KroNI	GCCGGC	1 cut(s)	522
Ksp22I	TGATCA	1 cut(s)	562
KspI	CCGCGG	1 cut(s)	318
LmnI	GCTCC	3 cut(s)	228, 2120, 2188
Lsp1109I	GCAGC	9 cut(s)	163, 445, 511, 1796, 1905, 2073, 2076, 2104, 2162
LweI	GCATC	4 cut(s)	243, 541, 961, 1136
MaeI	CTAG	7 cut(s)	452, 656, 728, 1476, 1482, 1742, 2021
MaeII	ACGT	3 cut(s)	1466, 1491, 1549
MaeIII	GTNAC	5 cut(s)	118, 208, 915, 1421, 1967
MfeI	CAATTG	1 cut(s)	1800
MflI	RGATCY	2 cut(s)	319, 1517
MhlI	GDGCHC	1 cut(s)	314
MlsI	TGGCCA	2 cut(s)	962, 1337
MluNI	TGGCCA	2 cut(s)	962, 1337
MlyI	GAGTC	4 cut(s)	63, 115, 1279, 2246
MmeI	TCCRAC	5 cut(s)	140, 438, 1486, 2219, 2268
MnlI	CCTC	7 cut(s)	1084, 1210, 1488, 1504, 2021, 2185, 2196
Mox20I	TGGCCA	2 cut(s)	962, 1337
MroNI	GCCGGC	1 cut(s)	520
MscI	TGGCCA	2 cut(s)	962, 1337
MseI	TTAA	8 cut(s)	606, 924, 1076, 1086, 1329, 1458, 1869, 1938
MslI	CAYNNNNRTG	1 cut(s)	305
Msp20I	TGGCCA	2 cut(s)	962, 1337
MspA1I	CMGCKG	3 cut(s)	137, 317, 2103
MspI	CCGG	7 cut(s)	290, 389, 521, 1770, 2034, 2051, 2233
MspR9I	CCNGG	3 cut(s)	291, 371, 1771
MunI	CAATTG	1 cut(s)	1800
Mva1269I	GAATGC	1 cut(s)	880
MvaI	CCWGG	1 cut(s)	371
MvnI	CGCG	3 cut(s)	317, 1994, 2071
NaeI	GCCGGC	1 cut(s)	522
NciI	CCSGG	2 cut(s)	291, 1771
NcoI	CCATGG	2 cut(s)	957, 1102
NdeI	CATATG	1 cut(s)	1018
NgoMIV	GCCGGC	1 cut(s)	520
NlaIII	CATG	8 cut(s)	628, 737, 961, 1010, 1106, 1250, 1699, 1978
NlaIV	GGNNCC	4 cut(s)	230, 321, 510, 1998
NmuCI	GTSAC	4 cut(s)	118, 208, 1421, 1967
NspI	RCATGY	1 cut(s)	1978
NspV	TTCGAA	1 cut(s)	947
PaeI	GCATGC	1 cut(s)	1978
PagI	TCATGA	1 cut(s)	1246
PctI	GAATGC	1 cut(s)	880
PdiI	GCCGGC	1 cut(s)	522
PfeI	GAWTC	4 cut(s)	574, 580, 1628, 1840
PflMI	CCANNNNNTGG	2 cut(s)	225, 1108
PleI	GAGTC	4 cut(s)	62, 115, 1278, 2246
PmaCI	CACGTG	2 cut(s)	1467, 1492
PmlI	CACGTG	2 cut(s)	1467, 1492
PpsI	GAGTC	4 cut(s)	62, 115, 1278, 2246
Ppu21I	YACGTR	2 cut(s)	1467, 1492
PshBI	ATTAAT	1 cut(s)	1458
Psp6I	CCWGG	1 cut(s)	369
PspCI	CACGTG	2 cut(s)	1467, 1492
PspFI	CCCAGC	1 cut(s)	2099
PspGI	CCWGG	1 cut(s)	369
PspN4I	GGNNCC	4 cut(s)	230, 321, 510, 1998
PspPI	GGNCC	2 cut(s)	367, 1996
PstI	CTGCAG	2 cut(s)	2094, 2152
PstNI	CAGNNNCTG	3 cut(s)	80, 548, 1793
PsuI	RGATCY	2 cut(s)	319, 1517
PvuII	CAGCTG	2 cut(s)	137, 2103
RsaI	GTAC	7 cut(s)	500, 678, 845, 1023, 1608, 1760, 1883
RsaNI	GTAC	7 cut(s)	499, 677, 844, 1022, 1607, 1759, 1882
RseI	CAYNNNNRTG	1 cut(s)	305
SacII	CCGCGG	1 cut(s)	318
SaqAI	TTAA	8 cut(s)	606, 924, 1076, 1086, 1329, 1458, 1869, 1938
Sau96I	GGNCC	2 cut(s)	367, 1996
SchI	GAGTC	4 cut(s)	63, 115, 1279, 2246
ScrFI	CCNGG	3 cut(s)	291, 371, 1771
SduI	GDGCHC	1 cut(s)	314
SfaNI	GCATC	4 cut(s)	243, 541, 961, 1136
SfcI	CTRYAG	4 cut(s)	238, 1929, 2090, 2148
Sfr303I	CCGCGG	1 cut(s)	318
SfuI	TTCGAA	1 cut(s)	947
SgrBI	CCGCGG	1 cut(s)	318
SinI	GGWCC	1 cut(s)	367
SmiMI	CAYNNNNRTG	1 cut(s)	305
SmlI	CTYRAG	1 cut(s)	213
SmoI	CTYRAG	1 cut(s)	213
SphI	GCATGC	1 cut(s)	1978
SsiI	CCGC	9 cut(s)	232, 315, 317, 554, 661, 1707, 1986, 1994, 2069
SspMI	CTAG	7 cut(s)	452, 656, 728, 1476, 1482, 1742, 2021
StyD4I	CCNGG	3 cut(s)	289, 369, 1769
StyI	CCWWGG	5 cut(s)	512, 957, 1102, 1615, 1650
TaaI	ACNGT	6 cut(s)	27, 358, 503, 1026, 1680, 1878
TaiI	ACGT	3 cut(s)	1469, 1494, 1552
TaqI	TCGA	6 cut(s)	583, 896, 947, 1041, 1596, 2212
TaqII	GACCGA	1 cut(s)	355
TatI	WGTACW	4 cut(s)	498, 1021, 1606, 1758
TauI	GCSGC	3 cut(s)	234, 663, 1997
TfiI	GAWTC	4 cut(s)	574, 580, 1628, 1840
Tru1I	TTAA	8 cut(s)	606, 924, 1076, 1086, 1329, 1458, 1869, 1938
Tru9I	TTAA	8 cut(s)	606, 924, 1076, 1086, 1329, 1458, 1869, 1938
TscAI	CASTG	8 cut(s)	30, 81, 482, 508, 654, 710, 885, 1310
TseFI	GTSAC	4 cut(s)	118, 208, 1421, 1967
TseI	GCWGC	9 cut(s)	176, 458, 524, 1784, 1918, 2086, 2089, 2092, 2150
Tsp45I	GTSAC	4 cut(s)	118, 208, 1421, 1967
TspRI	CASTG	8 cut(s)	30, 81, 482, 508, 654, 710, 885, 1310
Van91I	CCANNNNNTGG	2 cut(s)	225, 1108
VneI	GTGCAC	1 cut(s)	310
VpaK11BI	GGWCC	1 cut(s)	367
VspI	ATTAAT	1 cut(s)	1458
XagI	CCTNNNNNAGG	1 cut(s)	1901
XapI	RAATTY	3 cut(s)	1036, 1700, 2159
XceI	RCATGY	1 cut(s)	1978
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1441
XspI	CTAG	7 cut(s)	452, 656, 728, 1476, 1482, 1742, 2021

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.