Rh5AG504000

emp24/gp25L/p24 family/GOLD

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
85266014 .. 85388577
122564 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG504000.1

Sequence Viewer

Length: 2061 bp
ATGGGATTGTTGGGTGCTGAGTTATGGTTCGGGCTTTATTGGATCCTCACCCAATCCTGCCGATGGAACCTTACCTTTAGGCAAACTTTCAAGGATAGACTATCTCAGAGATTTGAGAATGAGTTGCCGGGAGTGGACATTTTTGTGACCACGGCAGACCCTATCATAGAGCCACCAATGATGGTCATGAACACCGTTCTGTCAGTCATGGCTTATGATTACCCAACCGAGAAGATCAGCGTGTATCTATCCGATGATGGTGGTTCCGAGCTTACATACTACGCACTCTTGGAGGCTGCTGAGTTTGCTAAGCAGTGGATACCATACTGCAAGAAATACAGTGTGGAGCCAAGGTCCCCAGTTGCTTACTTTGTCTCAATAGCTACTGATGCAGTTGGTGTTGATGATGATAAAAAGGCTAATGACTTGGCTGTCATTAAGAAATCATACAAGGACATGGAGACTAAAATCGAAAATGCAGTCAAATTAGGCCACATTCCAGAGAAAGTACGATCGAAACAGAAAGGCTTTTCTCAATGGGACTCACATTTGTCTAAACGTGATCATGACACCTATCTTCAAGTAGTAATTGATGGAAGAGACCCAAAGGCAATCGATGTTGAAGGACTTGTACTGCCAACTTTAGTGTATTTAGCTCGGGAGAAAAGACCACAGTATCACCATAACTTCAAAGCTGGCTCTATGAATGCATTGATTAGGGTTTCTTCAAATATTAGCAACGGGAAGGTCATTCTAAATGTAGACTGTGACATGTATTCAAACAATTCCATGGCCATAAGGGATGCACTTTGCTGCTTAATGGATGAAGAAAAAGGCCATGAAGTTGCATTCATACAATTCCCACAAAATTTTGAAAACCTCACCAAGAATGAATTATATATTTCATTCATGCGAACAATCAGCGAGGTGGAATTGCATGCTTTGGATGGTTTTGATGGCCCTTTTTACGTTGGAAGTGGATGCTTCCACAGAAGGGATACTCTTTGTGGAAGGAAGTTCACCAAGGGATGTAAGAGTGACATGAAATGGGAGATCAGTAGAAAAAGAGAAGAAACTACAATTCATGAATTGGAAGAAGATTCAAAAGTTCTTGCAAACTGTGCATACGAGCAAAACACTGAGTGGGGAAAAGAGATGGGTTTGAAATATGGTTGTGCAATTGAAGACGTGTTCACGGGGTTATCAATCCAATGCCGCGGTTGGAGATCGGTGTACTTGAACCCAACAAGGAAAGCTTTCTTAGGAGTAGCTCCAACGACATTGCTTCAGATGCTGGTGCAGCAAAAGAGATGGTCAGAAGGTAGTTTCCAGATTTTGCTTTCACGGCACAATCCTGCATTCTCTGATCAGATTAGCTTGGGCCAAAAACTTGGATACGCATATGTCGGGGCTTGGTCTATGAATTTCCTACCAACCCTATTTTACACAGTGATCCCTTCCCTTTACCTCCTTAAGGGCATTTCCTTATTTCCTCGGGTTTCAAGTCCATGGATCATACCATTTGCATATGTGATAATTGCCAAGTACACTGGGAGCTTTTTGGAGTTTCTATGGGCAGGTGGCTCAGCCTTAGGTTGGTGGAACGACCAACGAATGTGGCTATACAAAAGATCAAGCTCCTACTTATTTTCCTTCATCGACACCATTTTGTACCTTTTGGGGTATTCTGATTCGGCTTTTGTAATAACAGCCAAGACGTCGGATGAAGATGAGTCGCAACGATATGAGAAAGAGATTATGGAATTCGGAGCCTCTTCTCCACTGTTTTCCGTATTGGCATCACTTGCAGTACTAAATTTGTATTGCTTTGCTGGTTTTGTGAAGGAAGCAATCAGTCTGGGATCAAAGGGCGGCATTGCAGAAGTTTACGATACAATGGCATTGCAAATTCTACTATGTGGGATTTTGATTCTCATCAACCTGCCTTTGTACCAAGCCCTTTATCTAAGGAAGGACAAGGGGAAGTTGCCAAGCTCCATAGCTTTGAAGTCGATGGCATTTGGTGTCTTTGGTTTAACATGTTTCAATTTTTCGTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

686

Amino Acids

77.88

Weight (kDa)

6.27

Isoelectric Point (pI)

39.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cellulose_synt PF03552 45 - 344 6.4e-91 Cellulose synthase
Cellulose_synt PF03552 358 - 611 1.3e-44 Cellulose synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000273)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G55850
fragaria_vesca FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1568
AasI GACNNNNNNGTC 1 cut(s) 431
AatII GACGTC 1 cut(s) 1721
Acc36I ACCTGC 2 cut(s) 1568, 1950
AccI GTMKAC 1 cut(s) 762
AccII CGCG 1 cut(s) 1218
AciI CCGC 3 cut(s) 1216, 1218, 1872
AclWI GGATC 5 cut(s) 37, 50, 1447, 1520, 1870
AcoI YGGCCR 1 cut(s) 792
AcsI RAATTY 5 cut(s) 868, 1423, 1763, 1816, 1908
AcuI CTGAAG 1 cut(s) 1271
AcyI GRCGYC 1 cut(s) 1718
AdeI CACNNNGTG 1 cut(s) 1143
AfaI GTAC 7 cut(s) 510, 633, 1235, 1547, 1673, 1812, 1952
AfiI CCNNNNNNNGG 4 cut(s) 63, 994, 1474, 1596
AflII CTTAAG 1 cut(s) 1472
AflIII ACRYGT 3 cut(s) 771, 1188, 2039
AjiI CACGTC 1 cut(s) 1189
Alw26I GTCTC 3 cut(s) 379, 455, 594
AlwI GGATC 5 cut(s) 37, 50, 1447, 1520, 1870
AlwNI CAGNNNCTG 1 cut(s) 1294
Ama87I CYCGRG 2 cut(s) 657, 1494
AoxI GGCC 5 cut(s) 490, 792, 835, 958, 1381
ApeKI GCWGC 3 cut(s) 296, 813, 1300
ApoI RAATTY 5 cut(s) 868, 1423, 1763, 1816, 1908
ArsI GACNNNNNNTTYG 2 cut(s) 465, 497
Asp700I GAANNNNTTC 1 cut(s) 1256
AspS9I GGNCC 3 cut(s) 354, 959, 1381
AsuC2I CCSGG 1 cut(s) 129
AsuHPI GGTGA 4 cut(s) 40, 671, 874, 1012
AvaI CYCGRG 2 cut(s) 657, 1494
AvaII GGWCC 1 cut(s) 354
AxyI CCTNAGG 1 cut(s) 1591
BaeI ACNNNNGTAYC 2 cut(s) 659, 692
BalI TGGCCA 1 cut(s) 794
BamHI GGATCC 1 cut(s) 42
BarI GAAGNNNNNNTAC 2 cut(s) 615, 647
BbsI GAAGAC 1 cut(s) 1191
BbvI GCAGC 3 cut(s) 283, 800, 1312
BccI CCATC 9 cut(s) 57, 175, 251, 587, 941, 950, 1150, 1305, 2008
BceAI ACGGC 2 cut(s) 168, 1361
BciVI GTATCC 3 cut(s) 312, 991, 1388
BclI TGATCA 2 cut(s) 562, 1366
BcnI CCSGG 1 cut(s) 129
BcoDI GTCTC 3 cut(s) 379, 455, 594
BfrI CTTAAG 1 cut(s) 1472
BfuAI ACCTGC 2 cut(s) 1568, 1950
BfuI GTATCC 3 cut(s) 312, 991, 1388
BisI GCNGC 5 cut(s) 297, 814, 1216, 1301, 1873
BlpI GCTNAGC 2 cut(s) 309, 1585
BlsI GCNGC 5 cut(s) 298, 815, 1217, 1302, 1874
BmcAI AGTACT 1 cut(s) 1812
Bme1390I CCNGG 1 cut(s) 129
Bme18I GGWCC 1 cut(s) 354
BmeT110I CYCGRG 2 cut(s) 657, 1494
BmgBI CACGTC 1 cut(s) 1189
BmgT120I GGNCC 3 cut(s) 354, 959, 1381
BmiI GGNNCC 6 cut(s) 44, 68, 265, 348, 356, 1771
BmrFI CCNGG 1 cut(s) 129
BmrI ACTGGG 2 cut(s) 353, 1560
BmsI GCATC 5 cut(s) 379, 793, 971, 1281, 1808
BmuI ACTGGG 2 cut(s) 353, 1560
BpiI GAAGAC 1 cut(s) 1191
Bpu1102I GCTNAGC 2 cut(s) 309, 1585
BpuMI CCSGG 1 cut(s) 129
Bsa29I ATCGAT 1 cut(s) 615
BsaBI GATNNNNATC 1 cut(s) 1934
BsaHI GRCGYC 1 cut(s) 1718
BsaI GGTCTC 1 cut(s) 594
BsaJI CCNNGG 7 cut(s) 150, 350, 789, 1023, 1216, 1493, 1508
BsaXI ACNNNNNCTCC 2 cut(s) 338, 368
Bsc4I CCNNNNNNNGG 4 cut(s) 63, 994, 1474, 1596
Bse1I ACTGG 2 cut(s) 359, 1555
Bse21I CCTNAGG 1 cut(s) 1591
Bse3DI GCAATG 3 cut(s) 1280, 1875, 1901
Bse8I GATNNNNATC 1 cut(s) 1934
BseCI ATCGAT 1 cut(s) 615
BseDI CCNNGG 7 cut(s) 150, 350, 789, 1023, 1216, 1493, 1508
BseGI GGATG 6 cut(s) 808, 829, 952, 986, 1034, 1729
BseJI GATNNNNATC 1 cut(s) 1934
BseLI CCNNNNNNNGG 4 cut(s) 63, 994, 1474, 1596
BseMI GCAATG 3 cut(s) 1280, 1875, 1901
BseMII CTCAG 5 cut(s) 9, 119, 291, 1131, 1599
BseNI ACTGG 2 cut(s) 359, 1555
BseXI GCAGC 3 cut(s) 283, 800, 1312
BsgI GTGCAG 1 cut(s) 1319
Bsh1236I CGCG 1 cut(s) 1218
Bsh1285I CGRYCG 1 cut(s) 515
BshFI GGCC 5 cut(s) 492, 794, 837, 960, 1383
BshVI ATCGAT 1 cut(s) 615
BsiEI CGRYCG 1 cut(s) 515
BsiHKCI CYCGRG 2 cut(s) 657, 1494
BsiSI CCGG 1 cut(s) 128
BslFI GGGAC 2 cut(s) 340, 554
BslI CCNNNNNNNGG 4 cut(s) 63, 994, 1474, 1596
BsmAI GTCTC 3 cut(s) 379, 455, 594
BsmFI GGGAC 2 cut(s) 340, 554
BsmI GAATGC 3 cut(s) 712, 848, 1358
BsnI GGCC 5 cut(s) 492, 794, 837, 960, 1383
Bso31I GGTCTC 1 cut(s) 594
BsoBI CYCGRG 2 cut(s) 657, 1494
Bsp1720I GCTNAGC 2 cut(s) 309, 1585
Bsp19I CCATGG 2 cut(s) 789, 1508
BspACI CCGC 3 cut(s) 1216, 1218, 1872
BspANI GGCC 5 cut(s) 492, 794, 837, 960, 1383
BspCNI CTCAG 5 cut(s) 10, 118, 292, 1132, 1598
BspDI ATCGAT 1 cut(s) 615
BspFNI CGCG 1 cut(s) 1218
BspHI TCATGA 3 cut(s) 186, 565, 1084
BspLI GGNNCC 6 cut(s) 44, 68, 265, 348, 356, 1771
BspMI ACCTGC 2 cut(s) 1568, 1950
BspPI GGATC 5 cut(s) 37, 50, 1447, 1520, 1870
BspTI CTTAAG 1 cut(s) 1472
BspTNI GGTCTC 1 cut(s) 594
BsrDI GCAATG 3 cut(s) 1280, 1875, 1901
BsrI ACTGG 2 cut(s) 359, 1555
BssECI CCNNGG 7 cut(s) 150, 350, 789, 1023, 1216, 1493, 1508
BssNI GRCGYC 1 cut(s) 1718
BssT1I CCWWGG 4 cut(s) 350, 789, 1023, 1508
Bst4CI ACNGT 7 cut(s) 196, 341, 675, 767, 1121, 1450, 1785
Bst6I CTCTTC 2 cut(s) 592, 1780
BstACI GRCGYC 1 cut(s) 1718
BstAFI CTTAAG 1 cut(s) 1472
BstAPI GCANNNNNTGC 2 cut(s) 1121, 1805
BstC8I GCNNGC 2 cut(s) 697, 939
BstDEI CTNAG 9 cut(s) 18, 105, 300, 309, 1140, 1261, 1585, 1591, 1967
BstDSI CCRYGG 4 cut(s) 150, 789, 1216, 1508
BstENI CCTNNNNNAGG 1 cut(s) 1472
BstF5I GGATG 6 cut(s) 808, 829, 952, 986, 1034, 1729
BstFNI CGCG 1 cut(s) 1218
BstMAI GTCTC 3 cut(s) 379, 455, 594
BstMCI CGRYCG 1 cut(s) 515
BstMWI GCNNNNNNNGC 7 cut(s) 305, 389, 1121, 1291, 1300, 1345, 1805
BstNSI RCATGY 3 cut(s) 775, 941, 2043
BstSCI CCNGG 1 cut(s) 127
BstUI CGCG 1 cut(s) 1218
BstV1I GCAGC 3 cut(s) 283, 800, 1312
BstV2I GAAGAC 1 cut(s) 1191
BstX2I RGATCY 1 cut(s) 42
BstXI CCANNNNNNTGG 1 cut(s) 1391
BstYI RGATCY 1 cut(s) 42
Bsu15I ATCGAT 1 cut(s) 615
Bsu36I CCTNAGG 1 cut(s) 1591
BsuI GTATCC 3 cut(s) 312, 991, 1388
BsuRI GGCC 5 cut(s) 492, 794, 837, 960, 1383
BsuTUI ATCGAT 1 cut(s) 615
BtgI CCRYGG 4 cut(s) 150, 789, 1216, 1508
BtrI CACGTC 1 cut(s) 1189
BtsCI GGATG 6 cut(s) 808, 829, 952, 986, 1034, 1729
BtsI GCAGTG 1 cut(s) 320
BtsIMutI CAGTG 6 cut(s) 320, 346, 1137, 1455, 1548, 1781
BveI ACCTGC 2 cut(s) 1568, 1950
Cac8I GCNNGC 2 cut(s) 697, 939
CaiI CAGNNNCTG 1 cut(s) 1294
CciI TCATGA 3 cut(s) 186, 565, 1084
Cfr13I GGNCC 3 cut(s) 354, 959, 1381
Cfr42I CCGCGG 1 cut(s) 1219
ClaI ATCGAT 1 cut(s) 615
Csp6I GTAC 7 cut(s) 509, 632, 1234, 1546, 1672, 1811, 1951
CspCI CAANNNNNGTGG 2 cut(s) 1598, 1633
CviQI GTAC 7 cut(s) 509, 632, 1234, 1546, 1672, 1811, 1951
DdeI CTNAG 9 cut(s) 18, 105, 300, 309, 1140, 1261, 1585, 1591, 1967
DraIII CACNNNGTG 1 cut(s) 1143
DrdI GACNNNNNNGTC 1 cut(s) 431
DseDI GACNNNNNNGTC 1 cut(s) 431
EaeI YGGCCR 1 cut(s) 792
Eam1104I CTCTTC 2 cut(s) 592, 1780
EarI CTCTTC 2 cut(s) 592, 1780
Eco130I CCWWGG 4 cut(s) 350, 789, 1023, 1508
Eco31I GGTCTC 1 cut(s) 594
Eco47I GGWCC 1 cut(s) 354
Eco57I CTGAAG 1 cut(s) 1271
Eco81I CCTNAGG 1 cut(s) 1591
Eco88I CYCGRG 2 cut(s) 657, 1494
EcoNI CCTNNNNNAGG 1 cut(s) 1472
EcoO109I RGGNCCY 1 cut(s) 354
EcoRI GAATTC 1 cut(s) 1763
EcoT14I CCWWGG 4 cut(s) 350, 789, 1023, 1508
EcoT22I ATGCAT 1 cut(s) 712
ErhI CCWWGG 4 cut(s) 350, 789, 1023, 1508
FalI AAGNNNNNCTT 2 cut(s) 1240, 1272
FaqI GGGAC 2 cut(s) 340, 554
FauNDI CATATG 2 cut(s) 1402, 1528
FbaI TGATCA 2 cut(s) 562, 1366
FblI GTMKAC 1 cut(s) 762
Fnu4HI GCNGC 5 cut(s) 297, 814, 1216, 1301, 1873
FokI GGATG 6 cut(s) 815, 836, 959, 993, 1041, 1736
Fsp4HI GCNGC 5 cut(s) 297, 814, 1216, 1301, 1873
GluI GCNGC 5 cut(s) 297, 814, 1216, 1301, 1873
HaeIII GGCC 5 cut(s) 492, 794, 837, 960, 1383
HapII CCGG 1 cut(s) 128
Hin1I GRCGYC 1 cut(s) 1718
HindIII AAGCTT 1 cut(s) 1254
HinfI GANTC 5 cut(s) 542, 1100, 1691, 1733, 1930
HpaII CCGG 1 cut(s) 128
HphI GGTGA 4 cut(s) 40, 671, 874, 1012
Hpy166II GTNNAC 7 cut(s) 136, 763, 1020, 1194, 1234, 1548, 1888
Hpy188III TCNNGA 6 cut(s) 187, 500, 566, 659, 1085, 1330
Hpy8I GTNNAC 7 cut(s) 136, 763, 1020, 1194, 1234, 1548, 1888
Hpy99I CGWCG 1 cut(s) 1723
HpyAV CCTTC 9 cut(s) 617, 739, 987, 1005, 1313, 1467, 1663, 1837, 1966
HpyCH4III ACNGT 7 cut(s) 196, 341, 675, 767, 1121, 1450, 1785
HpyCH4IV ACGT 4 cut(s) 559, 969, 1188, 1718
HpyF10VI GCNNNNNNNGC 7 cut(s) 305, 389, 1121, 1291, 1300, 1345, 1805
HpyF3I CTNAG 9 cut(s) 18, 105, 300, 309, 1140, 1261, 1585, 1591, 1967
HpySE526I ACGT 4 cut(s) 559, 969, 1188, 1718
Hsp92I GRCGYC 1 cut(s) 1718
Ksp22I TGATCA 2 cut(s) 562, 1366
KspI CCGCGG 1 cut(s) 1219
LmnI GCTCC 6 cut(s) 346, 1276, 1554, 1643, 1769, 2000
Lsp1109I GCAGC 3 cut(s) 283, 800, 1312
LweI GCATC 5 cut(s) 379, 793, 971, 1281, 1808
MaeII ACGT 4 cut(s) 559, 969, 1188, 1718
MaeIII GTNAC 3 cut(s) 145, 767, 1037
MfeI CAATTG 1 cut(s) 1179
MflI RGATCY 1 cut(s) 42
MlsI TGGCCA 1 cut(s) 794
MluNI TGGCCA 1 cut(s) 794
MlyI GAGTC 2 cut(s) 536, 1742
MmeI TCCRAC 4 cut(s) 952, 1202, 1298, 1701
MnlI CCTC 7 cut(s) 56, 286, 890, 919, 1478, 1503, 1783
Mox20I TGGCCA 1 cut(s) 794
Mph1103I ATGCAT 1 cut(s) 712
MroXI GAANNNNTTC 1 cut(s) 1256
MscI TGGCCA 1 cut(s) 794
MseI TTAA 4 cut(s) 438, 818, 1473, 2036
MslI CAYNNNNRTG 1 cut(s) 143
Msp20I TGGCCA 1 cut(s) 794
MspA1I CMGCKG 1 cut(s) 1218
MspCI CTTAAG 1 cut(s) 1472
MspI CCGG 1 cut(s) 128
MspR9I CCNGG 1 cut(s) 129
MunI CAATTG 1 cut(s) 1179
Mva1269I GAATGC 3 cut(s) 712, 848, 1358
MvnI CGCG 1 cut(s) 1218
MwoI GCNNNNNNNGC 7 cut(s) 305, 389, 1121, 1291, 1300, 1345, 1805
NciI CCSGG 1 cut(s) 129
NcoI CCATGG 2 cut(s) 789, 1508
NdeI CATATG 2 cut(s) 1402, 1528
NlaIV GGNNCC 6 cut(s) 44, 68, 265, 348, 356, 1771
NmuCI GTSAC 3 cut(s) 145, 767, 1037
NsiI ATGCAT 1 cut(s) 712
NspI RCATGY 3 cut(s) 775, 941, 2043
PaeI GCATGC 1 cut(s) 941
PagI TCATGA 3 cut(s) 186, 565, 1084
PaqCI CACCTGC 1 cut(s) 1568
PciI ACATGT 2 cut(s) 771, 2039
PctI GAATGC 3 cut(s) 712, 848, 1358
PdmI GAANNNNTTC 1 cut(s) 1256
PfeI GAWTC 3 cut(s) 1100, 1691, 1930
PkrI GCNGC 5 cut(s) 298, 815, 1217, 1302, 1874
Ple19I CGATCG 1 cut(s) 515
PleI GAGTC 2 cut(s) 536, 1741
PpsI GAGTC 2 cut(s) 536, 1741
PpuMI RGGWCCY 1 cut(s) 354
PscI ACATGT 2 cut(s) 771, 2039
Psp5II RGGWCCY 1 cut(s) 354
PspN4I GGNNCC 6 cut(s) 44, 68, 265, 348, 356, 1771
PspPI GGNCC 3 cut(s) 354, 959, 1381
PspPPI RGGWCCY 1 cut(s) 354
PstNI CAGNNNCTG 1 cut(s) 1294
PsuI RGATCY 1 cut(s) 42
PvuI CGATCG 1 cut(s) 515
RsaI GTAC 7 cut(s) 510, 633, 1235, 1547, 1673, 1812, 1952
RsaNI GTAC 7 cut(s) 509, 632, 1234, 1546, 1672, 1811, 1951
RseI CAYNNNNRTG 1 cut(s) 143
SacII CCGCGG 1 cut(s) 1219
SaqAI TTAA 4 cut(s) 438, 818, 1473, 2036
SatI GCNGC 5 cut(s) 297, 814, 1216, 1301, 1873
Sau96I GGNCC 3 cut(s) 354, 959, 1381
ScaI AGTACT 1 cut(s) 1812
SchI GAGTC 2 cut(s) 536, 1742
ScrFI CCNGG 1 cut(s) 129
SfaNI GCATC 5 cut(s) 379, 793, 971, 1281, 1808
Sfr303I CCGCGG 1 cut(s) 1219
SgrBI CCGCGG 1 cut(s) 1219
SinI GGWCC 1 cut(s) 354
SmiMI CAYNNNNRTG 1 cut(s) 143
SmlI CTYRAG 1 cut(s) 1472
SmoI CTYRAG 1 cut(s) 1472
SphI GCATGC 1 cut(s) 941
SsiI CCGC 3 cut(s) 1216, 1218, 1872
SspI AATATT 1 cut(s) 733
StyD4I CCNGG 1 cut(s) 127
StyI CCWWGG 4 cut(s) 350, 789, 1023, 1508
TaaI ACNGT 7 cut(s) 196, 341, 675, 767, 1121, 1450, 1785
TaiI ACGT 4 cut(s) 562, 972, 1191, 1721
TaqI TCGA 5 cut(s) 471, 515, 615, 1659, 2012
TatI WGTACW 4 cut(s) 631, 1233, 1545, 1810
TauI GCSGC 2 cut(s) 1218, 1875
TfiI GAWTC 3 cut(s) 1100, 1691, 1930
Tru1I TTAA 4 cut(s) 438, 818, 1473, 2036
Tru9I TTAA 4 cut(s) 438, 818, 1473, 2036
TscAI CASTG 6 cut(s) 320, 346, 1144, 1455, 1555, 1788
TseFI GTSAC 3 cut(s) 145, 767, 1037
TseI GCWGC 3 cut(s) 296, 813, 1300
Tsp45I GTSAC 3 cut(s) 145, 767, 1037
TspGWI ACGGA 1 cut(s) 1780
TspRI CASTG 6 cut(s) 320, 346, 1144, 1455, 1555, 1788
Vha464I CTTAAG 1 cut(s) 1472
VpaK11BI GGWCC 1 cut(s) 354
XagI CCTNNNNNAGG 1 cut(s) 1472
XapI RAATTY 5 cut(s) 868, 1423, 1763, 1816, 1908
XceI RCATGY 3 cut(s) 775, 941, 2043
XmiI GTMKAC 1 cut(s) 762
XmnI GAANNNNTTC 1 cut(s) 1256
ZraI GACGTC 1 cut(s) 1719
ZrmI AGTACT 1 cut(s) 1812
Zsp2I ATGCAT 1 cut(s) 712
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.