Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003799.1

Orthogroup ID

OG0000273

Physical Location & Seq

Genomic Coordinates Reverse (-)

15503 .. 22525

Gene Structure 7023 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003799.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2457 bp

atgcatgagttacaaggtggaggacctggtcccgggtcctttcctatcattaaaccatttcaaatagagaaagctcgagcaattagagttggctcaaaaatgggagaggaaagacatttaccactgtttgagacaacgaaggcaaagggaagagtcctctataggttttctgcggtgtctgtttctgttggcatatgtttgatttgggtttatagagtgactcatataccaaaagctggagaagatggaagatttggttggatgctgttgttcgccgctgagttatggtttgctttttactggttcgtcactcaagcccttcggtggagccgcatcaaccggcataccttcaaggacaggctctctgaaagttatgagaatgagttgccgggggtggacatattcgtgtgcaccgcggatccgatcatagagccaccgattatggtgatgaatactgttctatcggtcatggcttatgactatccgccggagaagctcagcgtgtatctctccgacgatggcggctcagaatttacgtactatgcttttttagaagctgctgagtttgccaagcgctggataccctattgcaagaagtacaatgtggagccaagatcacccgctgcttattttgtctcaacagcttctgatgatcaaagtcagaatcagaaacaagaaggagatttagctgtaattaagttatggtttgccttttactggttcgtcactcaagcccttcggtggagccgcatcaaccggcataccttcaaggacaggctctctgaaagttatgagaatgagttgccgggggtggacatattcgtgtgcaccgcggatccgatcatagagccaccgattatggtgatgaatactgttctatcggtcatggcttatgactatccgccggagaagctcagcgtgtatctctccgacgatggcggctcagaatttacgtactatgcttttttagaagctgctgagtttgccaagcgctggataccctattgcaagaagtacaatgtggagccaagatcacccgctgcttattttgtctcaacagcttctgatgatcaaagtcagaatcagaaacaagaaggagatttagctgtaattaagaaattatatgaggacatggcgaccaaaattggaaatgcagtgaagctaggccgcatttcagaagaagtgagatcaaaacataaaggcttttctcgatgggactcatattcatcaaaacgtgaccatgaaaccattcttcaaatagtaattgatgggagagacccaaatgcaagagatgttgaagggtgtgtgttgccaactttggtgtatttggctcgggagaagagaccccagattcaccataacttcaaagctggtgctatgaatgctctgattagggtatcgtcaaatataagcaatgggaagttgcttcttaatgtagactgtgacatgtattcaaacaactcgaaggccataagggatgcactctgcttcttaatggatgaagaacaaggccatgagattgcatacgtacagttcccgcagaatttcgataaccttactaagaatgaattatacgcttcattacgagtaattgccgaggtgggggtgaaatatgggtgtccggttgaagatgtgttaacaggactattaatccaatgccaaggatggaaatcagtgtattgcaatccaacaaggaaagctttcttaggattaaatgcaaccatactgcttcaggcacttgtgcagcataagagatggtcggaaggcaaccttcaaattacgctgtctaagtacagtgttgtatggtatggccatggaaagattagtttaggccatcaacttggataccttcgctacaacttatgggctgctaattgctgggcaacactaatttactcaactcttccttcactttatctccttagaggcacgtccttatttcctcagaacattggaagctttgtggagtatctatggtgtggaggcacgagcttaggttggtggaatgaccaacgtatctggctttaccagagaacaacctcatacttatttgccttcatcgacaccactgtacactacctcggatacacagattcagcatttgtaataacagccaaggtggccgatgaggacgtgtccgaacgatatgagaaagagatcatggaatttgggggttcgtctccgatgtttaccgtgctggcaacacttgcattgctcaatctgtactgctttgcctggtttgtgaaggcagcaatcaccggaacaaaggttattgcagaggtttatgagacaatgttcttacagattcttctatgtgcggttttgattttaattaacctaccgttgtacgaagccctatacgtaaggaaggacaaggggaagctgccgagctctgtagcatttaagtcgatggcatttgctggatttgcttgcatatgttttaaatttctatattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

818

Amino Acids

93.29

Weight (kDa)

6.72

Isoelectric Point (pI)

44.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55850
fragaria_vesca	FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica	MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica	Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis	pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis	RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata	RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora	Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii	Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa	Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha	Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana	Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	3 cut(s)	236, 576, 993
AccI	GTMKAC	1 cut(s)	1437
AccII	CGCG	2 cut(s)	416, 833
AclWI	GGATC	4 cut(s)	413, 426, 830, 843
AcoI	YGGCCR	2 cut(s)	1810, 2121
AcsI	RAATTY	5 cut(s)	530, 947, 1543, 2165, 2444
AcuI	CTGAAG	1 cut(s)	1715
AfaI	GTAC	9 cut(s)	539, 599, 956, 1016, 1530, 1793, 2073, 2225, 2348
AfeI	AGCGCT	2 cut(s)	575, 992
AfiI	CCNNNNNNNGG	8 cut(s)	32, 236, 324, 576, 717, 741, 993, 1602
AflIII	ACRYGT	2 cut(s)	1446, 2133
AgsI	TTSAA	9 cut(s)	62, 352, 769, 1256, 1298, 1366, 1455, 1628, 1775
AjiI	CACGTC	2 cut(s)	1932, 2134
AjnI	CCWGG	2 cut(s)	25, 2234
AjuI	GAANNNNNNNTTGG	2 cut(s)	241, 273
Alw21I	GWGCWC	3 cut(s)	413, 830, 2393
Alw26I	GTCTC	7 cut(s)	125, 640, 1057, 1269, 1336, 2184, 2282
Alw44I	GTGCAC	2 cut(s)	409, 826
AlwI	GGATC	4 cut(s)	413, 426, 830, 843
AlwNI	CAGNNNCTG	2 cut(s)	647, 1064
Ama87I	CYCGRG	3 cut(s)	32, 75, 1332
Aor51HI	AGCGCT	2 cut(s)	575, 992
AoxI	GGCC	6 cut(s)	1165, 1467, 1510, 1810, 1831, 2121
ApaLI	GTGCAC	2 cut(s)	409, 826
ApeKI	GCWGC	8 cut(s)	557, 623, 974, 1040, 1744, 1868, 2249, 2383
ApoI	RAATTY	5 cut(s)	530, 947, 1543, 2165, 2444
AseI	ATTAAT	1 cut(s)	1649
Asp700I	GAANNNNTTC	2 cut(s)	1248, 1700
AspLEI	GCGC	2 cut(s)	576, 993
AspS9I	GGNCC	3 cut(s)	23, 29, 36
AsuC2I	CCSGG	4 cut(s)	33, 34, 390, 807
AsuHPI	GGTGA	7 cut(s)	457, 609, 874, 1026, 1346, 1618, 2248
AvaI	CYCGRG	3 cut(s)	32, 75, 1332
AvaII	GGWCC	3 cut(s)	23, 29, 36
BaeGI	GKGCMC	2 cut(s)	413, 830
BaeI	ACNNNNGTAYC	2 cut(s)	1999, 2032
BalI	TGGCCA	1 cut(s)	1812
BamHI	GGATCC	2 cut(s)	418, 835
BanII	GRGCYC	1 cut(s)	2393
BauI	CACGAG	1 cut(s)	1987
Bbv12I	GWGCWC	3 cut(s)	413, 830, 2393
BbvI	GCAGC	8 cut(s)	544, 610, 961, 1027, 1756, 1855, 2261, 2370
BccI	CCATC	9 cut(s)	239, 512, 929, 1206, 1262, 1659, 1749, 1842, 2404
BcgI	CGANNNNNNTGC	2 cut(s)	2388, 2422
BciT130I	CCWGG	2 cut(s)	27, 2236
BciVI	GTATCC	4 cut(s)	573, 990, 1838, 2078
BclI	TGATCA	2 cut(s)	652, 1069
BcnI	CCSGG	4 cut(s)	33, 34, 390, 807
BcoDI	GTCTC	7 cut(s)	125, 640, 1057, 1269, 1336, 2184, 2282
BfaI	CTAG	1 cut(s)	1163
BfmI	CTRYAG	2 cut(s)	160, 2394
BfoI	RGCGCY	2 cut(s)	577, 994
BfuI	GTATCC	4 cut(s)	573, 990, 1838, 2078
BglI	GCCNNNNNGGC	1 cut(s)	2120
BlpI	GCTNAGC	2 cut(s)	497, 914
Bme1390I	CCNGG	6 cut(s)	27, 33, 34, 390, 807, 2236
Bme18I	GGWCC	3 cut(s)	23, 29, 36
BmeT110I	CYCGRG	3 cut(s)	32, 75, 1332
BmgBI	CACGTC	2 cut(s)	1932, 2134
BmgT120I	GGNCC	3 cut(s)	23, 29, 36
BmiI	GGNNCC	8 cut(s)	31, 37, 329, 420, 609, 746, 837, 1026
BmrFI	CCNGG	6 cut(s)	27, 33, 34, 390, 807, 2236
BmsI	GCATC	4 cut(s)	252, 342, 759, 1468
BpmI	CTGGAG	1 cut(s)	258
Bpu10I	CCTNAGC	1 cut(s)	1993
Bpu1102I	GCTNAGC	2 cut(s)	497, 914
BpuEI	CTTGAG	2 cut(s)	297, 714
BpuMI	CCSGG	4 cut(s)	33, 34, 390, 807
BsaAI	YACGTR	4 cut(s)	537, 954, 1528, 2362
BsaBI	GATNNNNATC	1 cut(s)	1669
BsaI	GGTCTC	2 cut(s)	1269, 1336
BsaWI	WCCGGW	2 cut(s)	1621, 2258
BsaXI	ACNNNNNCTCC	2 cut(s)	1902, 1932
Bsc4I	CCNNNNNNNGG	8 cut(s)	32, 236, 324, 576, 717, 741, 993, 1602
Bse118I	RCCGGY	2 cut(s)	339, 756
Bse1I	ACTGG	2 cut(s)	305, 722
Bse3DI	GCAATG	2 cut(s)	1420, 2210
Bse8I	GATNNNNATC	1 cut(s)	1669
BseBI	CCWGG	2 cut(s)	27, 2236
BseGI	GGATG	4 cut(s)	267, 1483, 1504, 1670
BseJI	GATNNNNATC	1 cut(s)	1669
BseLI	CCNNNNNNNGG	8 cut(s)	32, 236, 324, 576, 717, 741, 993, 1602
BseMI	GCAATG	2 cut(s)	1420, 2210
BseMII	CTCAG	8 cut(s)	270, 511, 540, 552, 928, 957, 969, 1958
BseNI	ACTGG	2 cut(s)	305, 722
BseSI	GKGCMC	2 cut(s)	413, 830
BseXI	GCAGC	8 cut(s)	544, 610, 961, 1027, 1756, 1855, 2261, 2370
BseYI	CCCAGC	1 cut(s)	1878
BsgI	GTGCAG	1 cut(s)	1763
Bsh1236I	CGCG	2 cut(s)	416, 833
BshFI	GGCC	6 cut(s)	1167, 1469, 1512, 1812, 1833, 2123
BsiHKAI	GWGCWC	3 cut(s)	413, 830, 2393
BsiHKCI	CYCGRG	3 cut(s)	32, 75, 1332
BsiSI	CCGG	9 cut(s)	33, 340, 389, 488, 757, 806, 905, 1622, 2259
BslFI	GGGAC	2 cut(s)	15, 1229
BslI	CCNNNNNNNGG	8 cut(s)	32, 236, 324, 576, 717, 741, 993, 1602
BsmAI	GTCTC	7 cut(s)	125, 640, 1057, 1269, 1336, 2184, 2282
BsmBI	CGTCTC	1 cut(s)	2184
BsmFI	GGGAC	2 cut(s)	15, 1229
BsmI	GAATGC	1 cut(s)	1387
BsnI	GGCC	6 cut(s)	1167, 1469, 1512, 1812, 1833, 2123
Bso31I	GGTCTC	2 cut(s)	1269, 1336
BsoBI	CYCGRG	3 cut(s)	32, 75, 1332
Bsp1286I	GDGCHC	3 cut(s)	413, 830, 2393
Bsp1407I	TGTACA	1 cut(s)	2071
Bsp1720I	GCTNAGC	2 cut(s)	497, 914
Bsp19I	CCATGG	1 cut(s)	1813
BspANI	GGCC	6 cut(s)	1167, 1469, 1512, 1812, 1833, 2123
BspCNI	CTCAG	8 cut(s)	271, 510, 539, 553, 927, 956, 970, 1957
BspFNI	CGCG	2 cut(s)	416, 833
BspLI	GGNNCC	8 cut(s)	31, 37, 329, 420, 609, 746, 837, 1026
BspPI	GGATC	4 cut(s)	413, 426, 830, 843
BspTNI	GGTCTC	2 cut(s)	1269, 1336
BsrDI	GCAATG	2 cut(s)	1420, 2210
BsrFI	RCCGGY	2 cut(s)	339, 756
BsrGI	TGTACA	1 cut(s)	2071
BsrI	ACTGG	2 cut(s)	305, 722
BssAI	RCCGGY	2 cut(s)	339, 756
BssSI	CACGAG	1 cut(s)	1987
BssT1I	CCWWGG	3 cut(s)	1660, 1813, 2115
Bst2BI	CACGAG	1 cut(s)	1987
Bst2UI	CCWGG	2 cut(s)	27, 2236
Bst4CI	ACNGT	9 cut(s)	126, 457, 874, 1442, 1533, 1796, 2071, 2194, 2343
Bst6I	CTCTTC	3 cut(s)	145, 1334, 1908
BstAPI	GCANNNNNTGC	1 cut(s)	2207
BstAUI	TGTACA	1 cut(s)	2071
BstBAI	YACGTR	4 cut(s)	537, 954, 1528, 2362
BstC8I	GCNNGC	2 cut(s)	2199, 2431
BstDSI	CCRYGG	3 cut(s)	414, 831, 1813
BstF5I	GGATG	4 cut(s)	267, 1483, 1504, 1670
BstFNI	CGCG	2 cut(s)	416, 833
BstH2I	RGCGCY	2 cut(s)	577, 994
BstHHI	GCGC	2 cut(s)	576, 993
BstMAI	GTCTC	7 cut(s)	125, 640, 1057, 1269, 1336, 2184, 2282
BstMWI	GCNNNNNNNGC	8 cut(s)	493, 566, 910, 983, 1382, 2120, 2207, 2426
BstNI	CCWGG	2 cut(s)	27, 2236
BstNSI	RCATGY	1 cut(s)	1450
BstSCI	CCNGG	6 cut(s)	25, 31, 32, 388, 805, 2234
BstSFI	CTRYAG	2 cut(s)	160, 2394
BstSLI	GKGCMC	2 cut(s)	413, 830
BstSNI	TACGTA	4 cut(s)	537, 954, 1528, 2362
BstUI	CGCG	2 cut(s)	416, 833
BstV1I	GCAGC	8 cut(s)	544, 610, 961, 1027, 1756, 1855, 2261, 2370
BstX2I	RGATCY	2 cut(s)	418, 835
BstXI	CCANNNNNNTGG	1 cut(s)	1841
BstYI	RGATCY	2 cut(s)	418, 835
BsuI	GTATCC	4 cut(s)	573, 990, 1838, 2078
BsuRI	GGCC	6 cut(s)	1167, 1469, 1512, 1812, 1833, 2123
BtgI	CCRYGG	3 cut(s)	414, 831, 1813
BtrI	CACGTC	2 cut(s)	1932, 2134
BtsCI	GGATG	4 cut(s)	267, 1483, 1504, 1670
BtsI	GCAGTG	1 cut(s)	1161
BtsIMutI	CAGTG	5 cut(s)	122, 1161, 1680, 1801, 2067
Cac8I	GCNNGC	2 cut(s)	2199, 2431
CaiI	CAGNNNCTG	2 cut(s)	647, 1064
CfoI	GCGC	2 cut(s)	576, 993
Cfr10I	RCCGGY	2 cut(s)	339, 756
Cfr13I	GGNCC	3 cut(s)	23, 29, 36
Cfr42I	CCGCGG	2 cut(s)	417, 834
Cfr9I	CCCGGG	1 cut(s)	32
CsiI	ACCWGGT	1 cut(s)	25
Csp6I	GTAC	9 cut(s)	538, 598, 955, 1015, 1529, 1792, 2072, 2224, 2347
CviAII	CATG	9 cut(s)	5, 469, 886, 1132, 1241, 1447, 1514, 1814, 2161
CviQI	GTAC	9 cut(s)	538, 598, 955, 1015, 1529, 1792, 2072, 2224, 2347
DraI	TTTAAA	1 cut(s)	2443
EaeI	YGGCCR	2 cut(s)	1810, 2121
Eam1104I	CTCTTC	3 cut(s)	145, 1334, 1908
EarI	CTCTTC	3 cut(s)	145, 1334, 1908
EciI	GGCGGA	2 cut(s)	474, 891
Ecl136II	GAGCTC	1 cut(s)	2391
Eco105I	TACGTA	4 cut(s)	537, 954, 1528, 2362
Eco130I	CCWWGG	3 cut(s)	1660, 1813, 2115
Eco24I	GRGCYC	1 cut(s)	2393
Eco31I	GGTCTC	2 cut(s)	1269, 1336
Eco47I	GGWCC	3 cut(s)	23, 29, 36
Eco47III	AGCGCT	2 cut(s)	575, 992
Eco53kI	GAGCTC	1 cut(s)	2391
Eco57I	CTGAAG	1 cut(s)	1715
Eco88I	CYCGRG	3 cut(s)	32, 75, 1332
EcoICRI	GAGCTC	1 cut(s)	2391
EcoO109I	RGGNCCY	2 cut(s)	23, 36
EcoRII	CCWGG	2 cut(s)	25, 2234
EcoT14I	CCWWGG	3 cut(s)	1660, 1813, 2115
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	2393
ErhI	CCWWGG	3 cut(s)	1660, 1813, 2115
Esp3I	CGTCTC	1 cut(s)	2184
FaeI	CATG	9 cut(s)	8, 472, 889, 1135, 1244, 1450, 1517, 1817, 2164
FalI	AAGNNNNNCTT	4 cut(s)	1684, 1716, 1755, 1787
FaqI	GGGAC	2 cut(s)	15, 1229
FatI	CATG	9 cut(s)	4, 468, 885, 1131, 1240, 1446, 1513, 1813, 2160
FauI	CCCGC	3 cut(s)	628, 1045, 1545
FauNDI	CATATG	2 cut(s)	194, 2435
FbaI	TGATCA	2 cut(s)	652, 1069
FblI	GTMKAC	1 cut(s)	1437
FokI	GGATG	4 cut(s)	274, 1490, 1511, 1677
FriOI	GRGCYC	1 cut(s)	2393
FspBI	CTAG	1 cut(s)	1163
GlaI	GCGC	2 cut(s)	575, 992
GsaI	CCCAGC	1 cut(s)	1882
GsuI	CTGGAG	1 cut(s)	258
HaeII	RGCGCY	2 cut(s)	577, 994
HaeIII	GGCC	6 cut(s)	1167, 1469, 1512, 1812, 1833, 2123
HapII	CCGG	9 cut(s)	33, 340, 389, 488, 757, 806, 905, 1622, 2259
HhaI	GCGC	2 cut(s)	576, 993
Hin1II	CATG	9 cut(s)	8, 472, 889, 1135, 1244, 1450, 1517, 1817, 2164
Hin6I	GCGC	2 cut(s)	574, 991
HinP1I	GCGC	2 cut(s)	574, 991
HincII	GTYRAC	1 cut(s)	1638
HindII	GTYRAC	1 cut(s)	1638
HindIII	AAGCTT	2 cut(s)	1698, 1957
HinfI	GANTC	8 cut(s)	153, 220, 664, 1081, 1217, 1351, 2093, 2305
HpaI	GTTAAC	1 cut(s)	1638
HpaII	CCGG	9 cut(s)	33, 340, 389, 488, 757, 806, 905, 1622, 2259
HphI	GGTGA	7 cut(s)	457, 609, 874, 1026, 1346, 1618, 2248
Hpy166II	GTNNAC	8 cut(s)	397, 411, 814, 828, 1438, 1638, 2074, 2190
Hpy188III	TCNNGA	2 cut(s)	1209, 1334
Hpy8I	GTNNAC	8 cut(s)	397, 411, 814, 828, 1438, 1638, 2074, 2190
Hpy99I	CGWCG	2 cut(s)	518, 935
HpyCH4III	ACNGT	9 cut(s)	126, 457, 874, 1442, 1533, 1796, 2071, 2194, 2343
HpyCH4IV	ACGT	8 cut(s)	536, 953, 1234, 1527, 1931, 2014, 2133, 2361
HpyF10VI	GCNNNNNNNGC	8 cut(s)	493, 566, 910, 983, 1382, 2120, 2207, 2426
HpySE526I	ACGT	8 cut(s)	536, 953, 1234, 1527, 1931, 2014, 2133, 2361
Hsp92II	CATG	9 cut(s)	8, 472, 889, 1135, 1244, 1450, 1517, 1817, 2164
HspAI	GCGC	2 cut(s)	574, 991
Ksp22I	TGATCA	2 cut(s)	652, 1069
KspAI	GTTAAC	1 cut(s)	1638
KspI	CCGCGG	2 cut(s)	417, 834
LmnI	GCTCC	4 cut(s)	327, 607, 744, 1024
Lsp1109I	GCAGC	8 cut(s)	544, 610, 961, 1027, 1756, 1855, 2261, 2370
LweI	GCATC	4 cut(s)	252, 342, 759, 1468
MabI	ACCWGGT	1 cut(s)	25
MaeI	CTAG	1 cut(s)	1163
MaeII	ACGT	8 cut(s)	536, 953, 1234, 1527, 1931, 2014, 2133, 2361
MaeIII	GTNAC	6 cut(s)	9, 217, 307, 724, 1235, 1442
MflI	RGATCY	2 cut(s)	418, 835
MhlI	GDGCHC	3 cut(s)	413, 830, 2393
MlsI	TGGCCA	1 cut(s)	1812
MluNI	TGGCCA	1 cut(s)	1812
MlyI	GAGTC	3 cut(s)	162, 214, 1211
MmeI	TCCRAC	5 cut(s)	239, 537, 954, 1712, 1740
Mox20I	TGGCCA	1 cut(s)	1812
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	2 cut(s)	1248, 1700
MscI	TGGCCA	1 cut(s)	1812
MslI	CAYNNNNRTG	2 cut(s)	404, 821
Msp20I	TGGCCA	1 cut(s)	1812
MspA1I	CMGCKG	5 cut(s)	278, 416, 623, 833, 1040
MspI	CCGG	9 cut(s)	33, 340, 389, 488, 757, 806, 905, 1622, 2259
MspR9I	CCNGG	6 cut(s)	27, 33, 34, 390, 807, 2236
Mva1269I	GAATGC	1 cut(s)	1387
MvaI	CCWGG	2 cut(s)	27, 2236
MvnI	CGCG	2 cut(s)	416, 833
MwoI	GCNNNNNNNGC	8 cut(s)	493, 566, 910, 983, 1382, 2120, 2207, 2426
NciI	CCSGG	4 cut(s)	33, 34, 390, 807
NcoI	CCATGG	1 cut(s)	1813
NdeI	CATATG	2 cut(s)	194, 2435
NlaIII	CATG	9 cut(s)	8, 472, 889, 1135, 1244, 1450, 1517, 1817, 2164
NlaIV	GGNNCC	8 cut(s)	31, 37, 329, 420, 609, 746, 837, 1026
NmeAIII	GCCGAG	2 cut(s)	1621, 2412
NmuCI	GTSAC	5 cut(s)	217, 307, 724, 1235, 1442
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	1450
PacI	TTAATTAA	1 cut(s)	2334
PaeR7I	CTCGAG	1 cut(s)	75
PciI	ACATGT	1 cut(s)	1446
PctI	GAATGC	1 cut(s)	1387
PdmI	GAANNNNTTC	2 cut(s)	1248, 1700
PfeI	GAWTC	5 cut(s)	664, 1081, 1351, 2093, 2305
PflFI	GACNNNGTC	1 cut(s)	27
PflMI	CCANNNNNTGG	3 cut(s)	236, 576, 993
PleI	GAGTC	3 cut(s)	161, 214, 1211
PpsI	GAGTC	3 cut(s)	161, 214, 1211
Ppu21I	YACGTR	4 cut(s)	537, 954, 1528, 2362
PpuMI	RGGWCCY	2 cut(s)	23, 36
PscI	ACATGT	1 cut(s)	1446
PshBI	ATTAAT	1 cut(s)	1649
Psp124BI	GAGCTC	1 cut(s)	2393
Psp5II	RGGWCCY	2 cut(s)	23, 36
Psp6I	CCWGG	2 cut(s)	25, 2234
PspFI	CCCAGC	1 cut(s)	1878
PspGI	CCWGG	2 cut(s)	25, 2234
PspN4I	GGNNCC	8 cut(s)	31, 37, 329, 420, 609, 746, 837, 1026
PspPI	GGNCC	3 cut(s)	23, 29, 36
PspPPI	RGGWCCY	2 cut(s)	23, 36
PspXI	VCTCGAGB	1 cut(s)	75
PstNI	CAGNNNCTG	2 cut(s)	647, 1064
PsuI	RGATCY	2 cut(s)	418, 835
PsyI	GACNNNGTC	1 cut(s)	27
RsaI	GTAC	9 cut(s)	539, 599, 956, 1016, 1530, 1793, 2073, 2225, 2348
RsaNI	GTAC	9 cut(s)	538, 598, 955, 1015, 1529, 1792, 2072, 2224, 2347
RseI	CAYNNNNRTG	2 cut(s)	404, 821
SacI	GAGCTC	1 cut(s)	2393
SacII	CCGCGG	2 cut(s)	417, 834
Sau96I	GGNCC	3 cut(s)	23, 29, 36
SchI	GAGTC	3 cut(s)	162, 214, 1211
ScrFI	CCNGG	6 cut(s)	27, 33, 34, 390, 807, 2236
SduI	GDGCHC	3 cut(s)	413, 830, 2393
SexAI	ACCWGGT	1 cut(s)	25
SfaNI	GCATC	4 cut(s)	252, 342, 759, 1468
SfcI	CTRYAG	2 cut(s)	160, 2394
Sfr274I	CTCGAG	1 cut(s)	75
Sfr303I	CCGCGG	2 cut(s)	417, 834
SgrBI	CCGCGG	2 cut(s)	417, 834
SinI	GGWCC	3 cut(s)	23, 29, 36
SlaI	CTCGAG	1 cut(s)	75
SmaI	CCCGGG	1 cut(s)	34
SmiMI	CAYNNNNRTG	2 cut(s)	404, 821
SmlI	CTYRAG	3 cut(s)	75, 312, 729
SmoI	CTYRAG	3 cut(s)	75, 312, 729
SnaBI	TACGTA	4 cut(s)	537, 954, 1528, 2362
SspMI	CTAG	1 cut(s)	1163
SstI	GAGCTC	1 cut(s)	2393
StyD4I	CCNGG	6 cut(s)	25, 31, 32, 388, 805, 2234
StyI	CCWWGG	3 cut(s)	1660, 1813, 2115
TaaI	ACNGT	9 cut(s)	126, 457, 874, 1442, 1533, 1796, 2071, 2194, 2343
TaiI	ACGT	8 cut(s)	539, 956, 1237, 1530, 1934, 2017, 2136, 2364
TaqI	TCGA	6 cut(s)	76, 1210, 1463, 1548, 2061, 2408
TaqII	GACCGA	2 cut(s)	454, 871
TatI	WGTACW	5 cut(s)	597, 1014, 1791, 2071, 2223
TauI	GCSGC	6 cut(s)	278, 333, 525, 750, 942, 1170
TfiI	GAWTC	5 cut(s)	664, 1081, 1351, 2093, 2305
TscAI	CASTG	5 cut(s)	129, 1161, 1680, 1801, 2074
TseFI	GTSAC	5 cut(s)	217, 307, 724, 1235, 1442
TseI	GCWGC	8 cut(s)	557, 623, 974, 1040, 1744, 1868, 2249, 2383
Tsp45I	GTSAC	5 cut(s)	217, 307, 724, 1235, 1442
TspDTI	ATGAA	9 cut(s)	464, 881, 1215, 1257, 1394, 1515, 1569, 1581, 2047
TspMI	CCCGGG	1 cut(s)	32
TspRI	CASTG	5 cut(s)	129, 1161, 1680, 1801, 2074
Tth111I	GACNNNGTC	1 cut(s)	27
Van91I	CCANNNNNTGG	3 cut(s)	236, 576, 993
VneI	GTGCAC	2 cut(s)	409, 826
VpaK11BI	GGWCC	3 cut(s)	23, 29, 36
VspI	ATTAAT	1 cut(s)	1649
XapI	RAATTY	5 cut(s)	530, 947, 1543, 2165, 2444
XceI	RCATGY	1 cut(s)	1450
XhoI	CTCGAG	1 cut(s)	75
XmaI	CCCGGG	1 cut(s)	32
XmiI	GTMKAC	1 cut(s)	1437
XmnI	GAANNNNTTC	2 cut(s)	1248, 1700
XspI	CTAG	1 cut(s)	1163
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.