Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003799.1

Orthogroup ID

OG0000273

Physical Location & Seq

Genomic Coordinates Reverse (-)

44403 .. 48192

Gene Structure 3790 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003799.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

atgggagaggaaagatatttaccactatttgagacaacgaaggcaaagggaaaagttctctataggttttctgcagtgtctgtatctgttggtatatgtttgatttgggtttatagagtgactcatataccaaaagctggagaagatggaagatttggttggatgctgttgttcgccgctgagttatggttcgctttttactggttcgtcactcaagcccttcggtggagccgcatcaaccggcaaaccttcaaggataggctctctgaaagatatgagaatgagttgccgggggtggacatattcgtgtgcacagcggatccgatcatagagccgccgattatggtgatgaacactgttctgtcggtcatggcttatgactatccggcggagaagctcagcgtgtatctttccgacgatggaggctcagagtttacgtactatgctttcttggaagctgctgagtttgccaagcattggataccctattgcaagaagtacagtgtggagccaagatcacccgctgcttattttgtctcaacagcttctgatgatcaaagtcagaatcagaaacagaccggggatttagctgtaattaagaaattatacgaggacatggcggccaaaattggaaatgcagtgaacctaggccgcatttcagaagaagtgagatcaaaacataaaggcttttctcgatgggactcatattcatcaaaacgtgaccatgaaaccattcttcaaatagtaattgatgggagagacccaaatgcaagagatgttgaagggtgtgtgttgccaactttggtgtatttggctcgggagaagagaccccagattcaccataacttcaaagctggtgctatgaatgctctgattagggtatcgtcaaatataagcaatgggaagttgattcttaatgtagactgtgacatgtattcaaacaactcgaaggccataagggatgcactctgcttcttaatggatgaagaacaaggccatgagattgcatacgtacagttcccgcagaatttcgataacctaactaagaatgaattatacgcttcattacgagtatatttcgagatgggtttgaaatatgggtgtccggttgaagatgtgataacggggttatcgatccaatgccgaggatggaaatcagtgtattgcaatccaacaaggaaagctttcttaggaatagctccaaccacattgcttcaggcacttctgcagcataagagatggtcggaaggcaaccttcagattacgctgtctaagtacagtgttgtatggtatggccatggaaagattagtttaggccatcagcttggataccttcgctacaacttatgggctgctaattgctgggcaacactaatttactcaactcttccttcactttacctccttagaccgacgtccttatttcctcagatttcaagccgatggattataccatttgcatatgttataattgctaagaacattgggagctttgtggagtatctatggtgtggaggcacgagcttaggttggtggaacgaccaacgtatgtggctttacgagagaacaacctcatacttatttgccttcatcgacaccattgtacactacctcggatacacagattcagcatttgtaataacagccaaggtggccgatgaagacgtgtccgaacgatatgagaaagaaatcatggaattcgggggctcgtctccaatgtttaccgtgctggcaacacttgcattgctcaatttgtactgctttggctggtttctgaaggcagcaatcactggaacaaagggtgttgcagaggtttatgagacaatgtccttgcagattcttctatgtgtggttttgattgtcattaacctaccgttgtacgaagccctatacctaagaaaggacaaggggaagctgccgagctctgtagcatttaagtcgatggcatttgctggatttgcttgcatatgttttaaatttctatgttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

662

Amino Acids

75.53

Weight (kDa)

8.0

Isoelectric Point (pI)

39.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55850
fragaria_vesca	FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica	MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica	Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis	pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis	RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata	RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora	Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii	Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa	Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha	Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana	Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1469
AatII	GACGTC	1 cut(s)	1418
AccB7I	CCANNNNNTGG	2 cut(s)	137, 477
AccI	GTMKAC	1 cut(s)	921
AciI	CCGC	9 cut(s)	177, 232, 317, 335, 389, 522, 620, 652, 1022
AclWI	GGATC	3 cut(s)	314, 327, 1129
AcoI	YGGCCR	3 cut(s)	621, 1294, 1653
AcsI	RAATTY	3 cut(s)	1027, 1697, 1976
AcuI	CTGAAG	3 cut(s)	1199, 1241, 1796
AcyI	GRCGYC	1 cut(s)	1415
AfaI	GTAC	7 cut(s)	440, 500, 1014, 1277, 1605, 1757, 1880
AfiI	CCNNNNNNNGG	4 cut(s)	137, 225, 477, 1900
AflIII	ACRYGT	2 cut(s)	930, 1665
AgsI	TTSAA	8 cut(s)	253, 740, 782, 850, 939, 1093, 1112, 1437
AjiI	CACGTC	1 cut(s)	1666
AjuI	GAANNNNNNNTTGG	2 cut(s)	142, 174
Alw21I	GWGCWC	2 cut(s)	314, 1925
Alw26I	GTCTC	6 cut(s)	26, 541, 753, 820, 1716, 1814
Alw44I	GTGCAC	1 cut(s)	310
AlwI	GGATC	3 cut(s)	314, 327, 1129
AlwNI	CAGNNNCTG	2 cut(s)	80, 548
Ama87I	CYCGRG	1 cut(s)	816
AoxI	GGCC	7 cut(s)	621, 649, 951, 994, 1294, 1315, 1653
ApaLI	GTGCAC	1 cut(s)	310
ApeKI	GCWGC	6 cut(s)	458, 524, 1228, 1352, 1781, 1915
ApoI	RAATTY	3 cut(s)	1027, 1697, 1976
Asp700I	GAANNNNTTC	2 cut(s)	732, 1184
AspA2I	CCTAGG	1 cut(s)	646
AsuC2I	CCSGG	2 cut(s)	291, 580
AsuHPI	GGTGA	3 cut(s)	358, 510, 830
AvaI	CYCGRG	1 cut(s)	816
AvrII	CCTAGG	1 cut(s)	646
BaeGI	GKGCMC	1 cut(s)	314
BalI	TGGCCA	1 cut(s)	1296
BamHI	GGATCC	1 cut(s)	319
BanII	GRGCYC	2 cut(s)	1709, 1925
BauI	CACGAG	1 cut(s)	1519
BbsI	GAAGAC	1 cut(s)	1668
Bbv12I	GWGCWC	2 cut(s)	314, 1925
BbvI	GCAGC	6 cut(s)	445, 511, 1240, 1339, 1793, 1902
BcgI	CGANNNNNNTGC	2 cut(s)	1920, 1954
BciVI	GTATCC	3 cut(s)	474, 1322, 1610
BclI	TGATCA	1 cut(s)	553
BcnI	CCSGG	2 cut(s)	291, 580
BcoDI	GTCTC	6 cut(s)	26, 541, 753, 820, 1716, 1814
BfaI	CTAG	1 cut(s)	647
BfmI	CTRYAG	4 cut(s)	61, 72, 1226, 1926
BfuI	GTATCC	3 cut(s)	474, 1322, 1610
BglI	GCCNNNNNGGC	1 cut(s)	1652
BlnI	CCTAGG	1 cut(s)	646
BlpI	GCTNAGC	1 cut(s)	398
Bme1390I	CCNGG	2 cut(s)	291, 580
BmeT110I	CYCGRG	1 cut(s)	816
BmgBI	CACGTC	1 cut(s)	1666
BmiI	GGNNCC	3 cut(s)	230, 321, 510
BmrFI	CCNGG	2 cut(s)	291, 580
BmsI	GCATC	3 cut(s)	153, 243, 952
BoxI	GACNNNNGTC	1 cut(s)	1414
BpiI	GAAGAC	1 cut(s)	1668
BpmI	CTGGAG	1 cut(s)	159
Bpu10I	CCTNAGC	1 cut(s)	1525
Bpu1102I	GCTNAGC	1 cut(s)	398
BpuEI	CTTGAG	1 cut(s)	198
BpuMI	CCSGG	2 cut(s)	291, 580
Bsa29I	ATCGAT	1 cut(s)	1133
BsaAI	YACGTR	2 cut(s)	438, 1012
BsaBI	GATNNNNATC	1 cut(s)	1153
BsaHI	GRCGYC	1 cut(s)	1415
BsaI	GGTCTC	2 cut(s)	753, 820
BsaJI	CCNNGG	7 cut(s)	290, 579, 646, 1144, 1297, 1612, 1647
BsaWI	WCCGGW	1 cut(s)	1105
BsaXI	ACNNNNNCTCC	2 cut(s)	1386, 1416
Bsc4I	CCNNNNNNNGG	4 cut(s)	137, 225, 477, 1900
Bse118I	RCCGGY	1 cut(s)	240
Bse1I	ACTGG	2 cut(s)	206, 1795
Bse3DI	GCAATG	3 cut(s)	904, 1208, 1742
Bse8I	GATNNNNATC	1 cut(s)	1153
BseCI	ATCGAT	1 cut(s)	1133
BseDI	CCNNGG	7 cut(s)	290, 579, 646, 1144, 1297, 1612, 1647
BseGI	GGATG	4 cut(s)	168, 967, 988, 1154
BseJI	GATNNNNATC	1 cut(s)	1153
BseLI	CCNNNNNNNGG	4 cut(s)	137, 225, 477, 1900
BseMI	GCAATG	3 cut(s)	904, 1208, 1742
BseMII	CTCAG	5 cut(s)	171, 412, 441, 453, 1442
BseNI	ACTGG	2 cut(s)	206, 1795
BseSI	GKGCMC	1 cut(s)	314
BseXI	GCAGC	6 cut(s)	445, 511, 1240, 1339, 1793, 1902
BseYI	CCCAGC	1 cut(s)	1362
BshFI	GGCC	7 cut(s)	623, 651, 953, 996, 1296, 1317, 1655
BshVI	ATCGAT	1 cut(s)	1133
BsiHKAI	GWGCWC	2 cut(s)	314, 1925
BsiHKCI	CYCGRG	1 cut(s)	816
BsiSI	CCGG	5 cut(s)	241, 290, 386, 579, 1106
BslFI	GGGAC	1 cut(s)	713
BslI	CCNNNNNNNGG	4 cut(s)	137, 225, 477, 1900
BsmAI	GTCTC	6 cut(s)	26, 541, 753, 820, 1716, 1814
BsmBI	CGTCTC	1 cut(s)	1716
BsmFI	GGGAC	1 cut(s)	713
BsmI	GAATGC	1 cut(s)	871
BsnI	GGCC	7 cut(s)	623, 651, 953, 996, 1296, 1317, 1655
Bso31I	GGTCTC	2 cut(s)	753, 820
BsoBI	CYCGRG	1 cut(s)	816
Bsp1286I	GDGCHC	3 cut(s)	314, 1709, 1925
Bsp1407I	TGTACA	1 cut(s)	1603
Bsp143I	GATC	6 cut(s)	319, 324, 515, 553, 671, 1134
Bsp1720I	GCTNAGC	1 cut(s)	398
Bsp19I	CCATGG	1 cut(s)	1297
BspACI	CCGC	9 cut(s)	177, 232, 317, 335, 389, 522, 620, 652, 1022
BspANI	GGCC	7 cut(s)	623, 651, 953, 996, 1296, 1317, 1655
BspCNI	CTCAG	5 cut(s)	172, 411, 440, 454, 1441
BspDI	ATCGAT	1 cut(s)	1133
BspLI	GGNNCC	3 cut(s)	230, 321, 510
BspMAI	CTGCAG	2 cut(s)	76, 1230
BspPI	GGATC	3 cut(s)	314, 327, 1129
BspTNI	GGTCTC	2 cut(s)	753, 820
BsrDI	GCAATG	3 cut(s)	904, 1208, 1742
BsrFI	RCCGGY	1 cut(s)	240
BsrGI	TGTACA	1 cut(s)	1603
BsrI	ACTGG	2 cut(s)	206, 1795
BssAI	RCCGGY	1 cut(s)	240
BssECI	CCNNGG	7 cut(s)	290, 579, 646, 1144, 1297, 1612, 1647
BssMI	GATC	6 cut(s)	319, 324, 515, 553, 671, 1134
BssNI	GRCGYC	1 cut(s)	1415
BssSI	CACGAG	1 cut(s)	1519
BssT1I	CCWWGG	3 cut(s)	646, 1297, 1647
Bst2BI	CACGAG	1 cut(s)	1519
Bst4CI	ACNGT	7 cut(s)	358, 503, 926, 1017, 1280, 1726, 1875
Bst6I	CTCTTC	2 cut(s)	818, 1392
BstACI	GRCGYC	1 cut(s)	1415
BstAPI	GCANNNNNTGC	1 cut(s)	1739
BstAUI	TGTACA	1 cut(s)	1603
BstBAI	YACGTR	2 cut(s)	438, 1012
BstC8I	GCNNGC	2 cut(s)	1731, 1963
BstDSI	CCRYGG	1 cut(s)	1297
BstENI	CCTNNNNNAGG	1 cut(s)	1898
BstF5I	GGATG	4 cut(s)	168, 967, 988, 1154
BstKTI	GATC	6 cut(s)	322, 327, 518, 556, 674, 1137
BstMAI	GTCTC	6 cut(s)	26, 541, 753, 820, 1716, 1814
BstMBI	GATC	6 cut(s)	319, 324, 515, 553, 671, 1134
BstMWI	GCNNNNNNNGC	5 cut(s)	467, 866, 1652, 1739, 1958
BstNSI	RCATGY	1 cut(s)	934
BstPAI	GACNNNNGTC	1 cut(s)	1414
BstSCI	CCNGG	2 cut(s)	289, 578
BstSFI	CTRYAG	4 cut(s)	61, 72, 1226, 1926
BstSLI	GKGCMC	1 cut(s)	314
BstSNI	TACGTA	2 cut(s)	438, 1012
BstV1I	GCAGC	6 cut(s)	445, 511, 1240, 1339, 1793, 1902
BstV2I	GAAGAC	1 cut(s)	1668
BstX2I	RGATCY	1 cut(s)	319
BstXI	CCANNNNNNTGG	1 cut(s)	1325
BstYI	RGATCY	1 cut(s)	319
Bsu15I	ATCGAT	1 cut(s)	1133
BsuI	GTATCC	3 cut(s)	474, 1322, 1610
BsuRI	GGCC	7 cut(s)	623, 651, 953, 996, 1296, 1317, 1655
BsuTUI	ATCGAT	1 cut(s)	1133
BtgI	CCRYGG	1 cut(s)	1297
BtrI	CACGTC	1 cut(s)	1666
BtsCI	GGATG	4 cut(s)	168, 967, 988, 1154
BtsI	GCAGTG	2 cut(s)	81, 645
BtsIMutI	CAGTG	7 cut(s)	81, 354, 508, 645, 1164, 1285, 1788
Cac8I	GCNNGC	2 cut(s)	1731, 1963
CaiI	CAGNNNCTG	2 cut(s)	80, 548
Cfr10I	RCCGGY	1 cut(s)	240
ClaI	ATCGAT	1 cut(s)	1133
Csp6I	GTAC	7 cut(s)	439, 499, 1013, 1276, 1604, 1756, 1879
CspCI	CAANNNNNGTGG	2 cut(s)	1532, 1567
CviAII	CATG	7 cut(s)	370, 616, 725, 931, 998, 1298, 1693
CviQI	GTAC	7 cut(s)	439, 499, 1013, 1276, 1604, 1756, 1879
DpnI	GATC	6 cut(s)	321, 326, 517, 555, 673, 1136
DpnII	GATC	6 cut(s)	319, 324, 515, 553, 671, 1134
DraI	TTTAAA	1 cut(s)	1975
EaeI	YGGCCR	3 cut(s)	621, 1294, 1653
Eam1104I	CTCTTC	2 cut(s)	818, 1392
EarI	CTCTTC	2 cut(s)	818, 1392
EciI	GGCGGA	1 cut(s)	404
Ecl136II	GAGCTC	1 cut(s)	1923
Eco105I	TACGTA	2 cut(s)	438, 1012
Eco130I	CCWWGG	3 cut(s)	646, 1297, 1647
Eco24I	GRGCYC	2 cut(s)	1709, 1925
Eco31I	GGTCTC	2 cut(s)	753, 820
Eco53kI	GAGCTC	1 cut(s)	1923
Eco57I	CTGAAG	3 cut(s)	1199, 1241, 1796
Eco88I	CYCGRG	1 cut(s)	816
EcoICRI	GAGCTC	1 cut(s)	1923
EcoNI	CCTNNNNNAGG	1 cut(s)	1898
EcoRI	GAATTC	1 cut(s)	1697
EcoT14I	CCWWGG	3 cut(s)	646, 1297, 1647
EcoT38I	GRGCYC	2 cut(s)	1709, 1925
ErhI	CCWWGG	3 cut(s)	646, 1297, 1647
Esp3I	CGTCTC	1 cut(s)	1716
FaeI	CATG	7 cut(s)	373, 619, 728, 934, 1001, 1301, 1696
FalI	AAGNNNNNCTT	4 cut(s)	1168, 1200, 1239, 1271
FaqI	GGGAC	1 cut(s)	713
FatI	CATG	7 cut(s)	369, 615, 724, 930, 997, 1297, 1692
FauI	CCCGC	2 cut(s)	529, 1029
FauNDI	CATATG	2 cut(s)	1462, 1967
FbaI	TGATCA	1 cut(s)	553
FblI	GTMKAC	1 cut(s)	921
FokI	GGATG	4 cut(s)	175, 974, 995, 1161
FriOI	GRGCYC	2 cut(s)	1709, 1925
FspBI	CTAG	1 cut(s)	647
GsaI	CCCAGC	1 cut(s)	1366
GsuI	CTGGAG	1 cut(s)	159
HaeIII	GGCC	7 cut(s)	623, 651, 953, 996, 1296, 1317, 1655
HapII	CCGG	5 cut(s)	241, 290, 386, 579, 1106
Hin1I	GRCGYC	1 cut(s)	1415
Hin1II	CATG	7 cut(s)	373, 619, 728, 934, 1001, 1301, 1696
HindIII	AAGCTT	1 cut(s)	1182
HinfI	GANTC	7 cut(s)	121, 565, 701, 835, 910, 1625, 1837
HpaII	CCGG	5 cut(s)	241, 290, 386, 579, 1106
HphI	GGTGA	3 cut(s)	358, 510, 830
Hpy166II	GTNNAC	7 cut(s)	298, 312, 435, 643, 922, 1606, 1722
Hpy188III	TCNNGA	3 cut(s)	693, 818, 1081
Hpy8I	GTNNAC	7 cut(s)	298, 312, 435, 643, 922, 1606, 1722
Hpy99I	CGWCG	2 cut(s)	419, 1417
HpyCH4III	ACNGT	7 cut(s)	358, 503, 926, 1017, 1280, 1726, 1875
HpyCH4IV	ACGT	6 cut(s)	437, 718, 1011, 1415, 1546, 1665
HpyF10VI	GCNNNNNNNGC	5 cut(s)	467, 866, 1652, 1739, 1958
HpySE526I	ACGT	6 cut(s)	437, 718, 1011, 1415, 1546, 1665
Hsp92I	GRCGYC	1 cut(s)	1415
Hsp92II	CATG	7 cut(s)	373, 619, 728, 934, 1001, 1301, 1696
Ksp22I	TGATCA	1 cut(s)	553
Kzo9I	GATC	6 cut(s)	319, 324, 515, 553, 671, 1134
LmnI	GCTCC	4 cut(s)	228, 508, 1204, 1488
Lsp1109I	GCAGC	6 cut(s)	445, 511, 1240, 1339, 1793, 1902
LweI	GCATC	3 cut(s)	153, 243, 952
MaeI	CTAG	1 cut(s)	647
MaeII	ACGT	6 cut(s)	437, 718, 1011, 1415, 1546, 1665
MaeIII	GTNAC	4 cut(s)	118, 208, 719, 926
MalI	GATC	6 cut(s)	321, 326, 517, 555, 673, 1136
MboI	GATC	6 cut(s)	319, 324, 515, 553, 671, 1134
MflI	RGATCY	1 cut(s)	319
MhlI	GDGCHC	3 cut(s)	314, 1709, 1925
MlsI	TGGCCA	1 cut(s)	1296
MluNI	TGGCCA	1 cut(s)	1296
MlyI	GAGTC	2 cut(s)	115, 695
MmeI	TCCRAC	5 cut(s)	140, 438, 1196, 1224, 1226
MnlI	CCTC	9 cut(s)	416, 604, 1139, 1412, 1437, 1508, 1582, 1622, 1804
Mox20I	TGGCCA	1 cut(s)	1296
MroXI	GAANNNNTTC	2 cut(s)	732, 1184
MscI	TGGCCA	1 cut(s)	1296
MseI	TTAA	7 cut(s)	597, 915, 977, 1866, 1935, 1974, 1987
MslI	CAYNNNNRTG	1 cut(s)	305
Msp20I	TGGCCA	1 cut(s)	1296
MspA1I	CMGCKG	3 cut(s)	179, 317, 524
MspI	CCGG	5 cut(s)	241, 290, 386, 579, 1106
MspR9I	CCNGG	2 cut(s)	291, 580
Mva1269I	GAATGC	1 cut(s)	871
MwoI	GCNNNNNNNGC	5 cut(s)	467, 866, 1652, 1739, 1958
NciI	CCSGG	2 cut(s)	291, 580
NcoI	CCATGG	1 cut(s)	1297
NdeI	CATATG	2 cut(s)	1462, 1967
NdeII	GATC	6 cut(s)	319, 324, 515, 553, 671, 1134
NlaIII	CATG	7 cut(s)	373, 619, 728, 934, 1001, 1301, 1696
NlaIV	GGNNCC	3 cut(s)	230, 321, 510
NmeAIII	GCCGAG	2 cut(s)	1169, 1944
NmuCI	GTSAC	4 cut(s)	118, 208, 719, 926
NspI	RCATGY	1 cut(s)	934
PciI	ACATGT	1 cut(s)	930
PcsI	WCGNNNNNNNCGW	1 cut(s)	1130
PctI	GAATGC	1 cut(s)	871
PdmI	GAANNNNTTC	2 cut(s)	732, 1184
PfeI	GAWTC	5 cut(s)	565, 835, 910, 1625, 1837
PflFI	GACNNNGTC	1 cut(s)	1825
PflMI	CCANNNNNTGG	2 cut(s)	137, 477
PleI	GAGTC	2 cut(s)	115, 695
PpsI	GAGTC	2 cut(s)	115, 695
Ppu21I	YACGTR	2 cut(s)	438, 1012
PscI	ACATGT	1 cut(s)	930
PshAI	GACNNNNGTC	1 cut(s)	1414
PsiI	TTATAA	1 cut(s)	1469
Psp124BI	GAGCTC	1 cut(s)	1925
PspFI	CCCAGC	1 cut(s)	1362
PspN4I	GGNNCC	3 cut(s)	230, 321, 510
PstI	CTGCAG	2 cut(s)	76, 1230
PstNI	CAGNNNCTG	2 cut(s)	80, 548
PsuI	RGATCY	1 cut(s)	319
PsyI	GACNNNGTC	1 cut(s)	1825
RsaI	GTAC	7 cut(s)	440, 500, 1014, 1277, 1605, 1757, 1880
RsaNI	GTAC	7 cut(s)	439, 499, 1013, 1276, 1604, 1756, 1879
RseI	CAYNNNNRTG	1 cut(s)	305
SacI	GAGCTC	1 cut(s)	1925
SaqAI	TTAA	7 cut(s)	597, 915, 977, 1866, 1935, 1974, 1987
Sau3AI	GATC	6 cut(s)	319, 324, 515, 553, 671, 1134
SchI	GAGTC	2 cut(s)	115, 695
ScrFI	CCNGG	2 cut(s)	291, 580
SduI	GDGCHC	3 cut(s)	314, 1709, 1925
SfaNI	GCATC	3 cut(s)	153, 243, 952
SfcI	CTRYAG	4 cut(s)	61, 72, 1226, 1926
SmiMI	CAYNNNNRTG	1 cut(s)	305
SmlI	CTYRAG	1 cut(s)	213
SmoI	CTYRAG	1 cut(s)	213
SnaBI	TACGTA	2 cut(s)	438, 1012
SsiI	CCGC	9 cut(s)	177, 232, 317, 335, 389, 522, 620, 652, 1022
SspMI	CTAG	1 cut(s)	647
SstI	GAGCTC	1 cut(s)	1925
StyD4I	CCNGG	2 cut(s)	289, 578
StyI	CCWWGG	3 cut(s)	646, 1297, 1647
TaaI	ACNGT	7 cut(s)	358, 503, 926, 1017, 1280, 1726, 1875
TaiI	ACGT	6 cut(s)	440, 721, 1014, 1418, 1549, 1668
TaqI	TCGA	7 cut(s)	694, 947, 1032, 1080, 1133, 1593, 1940
TaqII	GACCGA	2 cut(s)	355, 1426
TatI	WGTACW	4 cut(s)	498, 1275, 1603, 1755
TauI	GCSGC	5 cut(s)	179, 234, 337, 623, 654
TfiI	GAWTC	5 cut(s)	565, 835, 910, 1625, 1837
Tru1I	TTAA	7 cut(s)	597, 915, 977, 1866, 1935, 1974, 1987
Tru9I	TTAA	7 cut(s)	597, 915, 977, 1866, 1935, 1974, 1987
TscAI	CASTG	7 cut(s)	81, 361, 508, 645, 1164, 1285, 1795
TseFI	GTSAC	4 cut(s)	118, 208, 719, 926
TseI	GCWGC	6 cut(s)	458, 524, 1228, 1352, 1781, 1915
Tsp45I	GTSAC	4 cut(s)	118, 208, 719, 926
TspDTI	ATGAA	9 cut(s)	365, 699, 741, 878, 999, 1053, 1065, 1579, 1674
TspRI	CASTG	7 cut(s)	81, 361, 508, 645, 1164, 1285, 1795
Tth111I	GACNNNGTC	1 cut(s)	1825
Van91I	CCANNNNNTGG	2 cut(s)	137, 477
VneI	GTGCAC	1 cut(s)	310
XagI	CCTNNNNNAGG	1 cut(s)	1898
XapI	RAATTY	3 cut(s)	1027, 1697, 1976
XceI	RCATGY	1 cut(s)	934
XmaJI	CCTAGG	1 cut(s)	646
XmiI	GTMKAC	1 cut(s)	921
XmnI	GAANNNNTTC	2 cut(s)	732, 1184
XspI	CTAG	1 cut(s)	647
ZraI	GACGTC	1 cut(s)	1416

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.