Rmu_sc0007021.1_g000014

emp24/gp25L/p24 family/GOLD

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007021.1
OG0000273
Physical Location & Seq
Forward (+)
38156 .. 42574
4419 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007021.1_g000014.1.cds

Sequence Viewer

Length: 2790 bp
atgggaaatgaagggtatttaccattgtttgagaccaagagagcaaagggaagagtcatatatagggtgtttgctgcttctttgtttgcaggtatatgcttggtttgggtttatagggcgagtcacataccaaaaccaggagaagatagaaggtttgggtggatgggattgttgggtgctgagttatggttcgggctttattggatcctcacccaatcctgccgatggaaccttacctttaggcaaactttcaaggatagactatctcagagatttgagaatgagttgccgggagtggacatttttgtgaccacggcagaccctatcatagagccaccaatgatggtcatgaacaccgttctgtcagtcatggcttatgattacccaaccgagaagatcagcgtgtatctatccgatgatggtggttccgagcttacatactacgcactcttggaggctgctgagtttgctaagcagtggataccatactgcaagaaatacagtgtggagccaaggtccccagttgcttactttgtctcaatagctactgatgcagttggtgttgatgataaaaaggctaatgacttggctgtcattaagaaatcatacaaggacatggagactaaaatcgaaaatgcagtcaaattaggccacattccagagaaagtacgatcgaaacagaaaggcttttctcaatgggactcacatttgtctaaacgtgatcatgacacctatcttcaagtagtaattgatggaagagacccaaaggcaatcgacgttgaaggacttgtactgccaactttagtgtatttagctcgggagaaaagaccacagtatcaccataacttcaaagctggctctatgaatgcattgattagggtttcttcaaatattagcaacgggaaggtcattctaaatgtagactgtgacatgtattcaaacaattccatggccataagggatgcactttgctgcttaatggatgaagaaaaaggccatgaagttgcattcgtacaattcccacaaaattttgaaaacctcaccaagaatgaattatatattccattcatgcgaacaatcagcgaggtggaattccatgctttggatggttttgatggccctttttacgttggaagtggatgcttccacagaagggatactctttgtggaaggaagttcaccaagggatgtaagagtgacatgaaatgggagatcagtagaaaaagagaagaaactacaattcatgaattggaagaagattcaaaagttcttgcaaactgtgcatacgagcaaaacactgagtggggaaaagagatgggtttgaaatatggttgtgcaattgaagacgtgttcacggggttatcaatccaatgccgcggttggagatcggtgtacttgaacccaacaaggaaagctttcttaggagtagctccaacgacattgcttcagatgctggtgcagcaaaagagatggtcggaaggtagtttccagattttgctttcacggcacaatcctgcattctctaatcagattagcttgggccaaaaacttggatacgcatatgtcggggcttggtctatgaatttcctaccaaccctattttacacagtgatcccttccctttacctccttaagggcatttccttatttcctcgggtggaattccatgctttggatggttttgatggccctttttacgttggaagtggatgcttccacagaagggatactctttgtggaaggaagttcaccaagggatgtaagagtgacatgaaatgggagatcagtagaaaaagagaagaaactacaattcatgaattggaagaagattcaaaagttcttgcaaactgtgcatacgagcaaaacactgagtggggaaaagagatgggtttgaaatatggttgtgcaattgaagacgtgttcacggggttatcaatccaatgccgcggttggagatcggtgtacttgaacccaacaaggaaagctttcttaggagtagctccaacgacattgcttcagatgctggtgcagcaaaagagatggtcggaaggtagtttccagattttgctttcacggcacaatcctgcattctctaatcagattagcttgggccaaaaacttggatacgcatatgtcggggcttggtctatgaatttcctaccaaccctattttacacagtgatcccttccctttacctccttaagggcatttccttatttcctcgggtttcaagtccatggatcataccatttgcatatgtgataattgccaagtacactgggagctttttggagtttctatgggcaggtggctcagccttaggttggtggaacgaccaacgaatgtggctatacaaaagatcaagctcctacatattttccttcatcgacaccattttgtaccttttggggtattctgattcggcttttgtaataacagccaagacgtcggatgaagatgagtcgcaacgatatgagaaagagattatggaattcggagcctcttctccactgttttccgtattggcatcacttgcagtactaaatttgtattgctttgctggttttgtgaaggaagcaatcagtctgggatcaaagggcggcattgcagaagtttacgatacaatggcattgcaaattctactatgtgggattttgattctcatcaacctgcctttgtaccaagccctttatctaaggaaggacaaggggaagttgccaagctccatagctttgaagtcgatggcatttggtgtctttggtttaacatgtttcaatttttcgtattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cellulose_synt EMP24_GP25L

Protein Analysis

929

Amino Acids

105.71

Weight (kDa)

8.42

Isoelectric Point (pI)

40.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000273)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G55850
fragaria_vesca FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2297
AasI GACNNNNNNGTC 1 cut(s) 590
AatII GACGTC 1 cut(s) 2450
Acc36I ACCTGC 3 cut(s) 80, 2297, 2679
AccB7I CCANNNNNTGG 2 cut(s) 1102, 1672
AccI GTMKAC 1 cut(s) 921
AccII CGCG 2 cut(s) 1377, 1947
AciI CCGC 5 cut(s) 1375, 1377, 1945, 1947, 2601
AclWI GGATC 6 cut(s) 199, 212, 1606, 2176, 2249, 2599
AcoI YGGCCR 1 cut(s) 951
AcsI RAATTY 8 cut(s) 1027, 1091, 1582, 1661, 2152, 2492, 2545, 2637
AcuI CTGAAG 2 cut(s) 1430, 2000
AcyI GRCGYC 1 cut(s) 2447
AdeI CACNNNGTG 2 cut(s) 1302, 1872
AfaI GTAC 9 cut(s) 669, 792, 1014, 1394, 1964, 2276, 2402, 2541, 2681
AfiI CCNNNNNNNGG 9 cut(s) 137, 225, 1102, 1153, 1633, 1672, 1723, 2203, 2325
AflII CTTAAG 2 cut(s) 1631, 2201
AflIII ACRYGT 4 cut(s) 930, 1347, 1917, 2768
AjiI CACGTC 2 cut(s) 1348, 1918
AjnI CCWGG 1 cut(s) 136
Alw26I GTCTC 4 cut(s) 26, 541, 614, 753
AlwI GGATC 6 cut(s) 199, 212, 1606, 2176, 2249, 2599
AlwNI CAGNNNCTG 2 cut(s) 1453, 2023
Ama87I CYCGRG 3 cut(s) 816, 1653, 2223
AoxI GGCC 7 cut(s) 649, 951, 994, 1117, 1540, 1687, 2110
ApeKI GCWGC 5 cut(s) 74, 458, 972, 1459, 2029
ApoI RAATTY 8 cut(s) 1027, 1091, 1582, 1661, 2152, 2492, 2545, 2637
ArsI GACNNNNNNTTYG 2 cut(s) 624, 656
Asp700I GAANNNNTTC 2 cut(s) 1415, 1985
AspS9I GGNCC 5 cut(s) 516, 1118, 1540, 1688, 2110
AsuC2I CCSGG 1 cut(s) 291
AsuHPI GGTGA 5 cut(s) 202, 830, 1033, 1171, 1741
AvaI CYCGRG 3 cut(s) 816, 1653, 2223
AvaII GGWCC 1 cut(s) 516
AxyI CCTNAGG 1 cut(s) 2320
BaeI ACNNNNGTAYC 2 cut(s) 818, 851
BalI TGGCCA 1 cut(s) 953
BamHI GGATCC 1 cut(s) 204
BarI GAAGNNNNNNTAC 3 cut(s) 35, 774, 806
BbsI GAAGAC 2 cut(s) 1350, 1920
BbvI GCAGC 5 cut(s) 61, 445, 959, 1471, 2041
BceAI ACGGC 3 cut(s) 330, 1520, 2090
BciT130I CCWGG 1 cut(s) 138
BciVI GTATCC 5 cut(s) 474, 1150, 1547, 1720, 2117
BclI TGATCA 1 cut(s) 721
BcnI CCSGG 1 cut(s) 291
BcoDI GTCTC 4 cut(s) 26, 541, 614, 753
BfrI CTTAAG 2 cut(s) 1631, 2201
BfuAI ACCTGC 3 cut(s) 80, 2297, 2679
BfuI GTATCC 5 cut(s) 474, 1150, 1547, 1720, 2117
BisI GCNGC 8 cut(s) 75, 459, 973, 1375, 1460, 1945, 2030, 2602
BlpI GCTNAGC 2 cut(s) 471, 2314
BlsI GCNGC 8 cut(s) 76, 460, 974, 1376, 1461, 1946, 2031, 2603
BmcAI AGTACT 1 cut(s) 2541
Bme1390I CCNGG 2 cut(s) 138, 291
Bme18I GGWCC 1 cut(s) 516
BmeT110I CYCGRG 3 cut(s) 816, 1653, 2223
BmgBI CACGTC 2 cut(s) 1348, 1918
BmgT120I GGNCC 5 cut(s) 516, 1118, 1540, 1688, 2110
BmiI GGNNCC 6 cut(s) 206, 230, 427, 510, 518, 2500
BmrFI CCNGG 2 cut(s) 138, 291
BmrI ACTGGG 2 cut(s) 515, 2289
BmsI GCATC 7 cut(s) 541, 952, 1130, 1440, 1700, 2010, 2537
BmuI ACTGGG 2 cut(s) 515, 2289
BpiI GAAGAC 2 cut(s) 1350, 1920
Bpu1102I GCTNAGC 2 cut(s) 471, 2314
BpuMI CCSGG 1 cut(s) 291
BsaBI GATNNNNATC 1 cut(s) 2663
BsaHI GRCGYC 1 cut(s) 2447
BsaI GGTCTC 2 cut(s) 26, 753
BsaXI ACNNNNNCTCC 2 cut(s) 500, 530
Bsc4I CCNNNNNNNGG 9 cut(s) 137, 225, 1102, 1153, 1633, 1672, 1723, 2203, 2325
Bse1I ACTGG 2 cut(s) 521, 2284
Bse21I CCTNAGG 1 cut(s) 2320
Bse3DI GCAATG 4 cut(s) 1439, 2009, 2604, 2630
Bse8I GATNNNNATC 1 cut(s) 2663
BseBI CCWGG 1 cut(s) 138
BseJI GATNNNNATC 1 cut(s) 2663
BseLI CCNNNNNNNGG 9 cut(s) 137, 225, 1102, 1153, 1633, 1672, 1723, 2203, 2325
BseMI GCAATG 4 cut(s) 1439, 2009, 2604, 2630
BseMII CTCAG 6 cut(s) 171, 281, 453, 1290, 1860, 2328
BseNI ACTGG 2 cut(s) 521, 2284
BseXI GCAGC 5 cut(s) 61, 445, 959, 1471, 2041
BsgI GTGCAG 2 cut(s) 1478, 2048
Bsh1236I CGCG 2 cut(s) 1377, 1947
Bsh1285I CGRYCG 1 cut(s) 674
BshFI GGCC 7 cut(s) 651, 953, 996, 1119, 1542, 1689, 2112
BsiEI CGRYCG 1 cut(s) 674
BsiHKCI CYCGRG 3 cut(s) 816, 1653, 2223
BsiSI CCGG 1 cut(s) 290
BslFI GGGAC 2 cut(s) 502, 713
BslI CCNNNNNNNGG 9 cut(s) 137, 225, 1102, 1153, 1633, 1672, 1723, 2203, 2325
BsmAI GTCTC 4 cut(s) 26, 541, 614, 753
BsmFI GGGAC 2 cut(s) 502, 713
BsmI GAATGC 4 cut(s) 871, 1007, 1517, 2087
BsnI GGCC 7 cut(s) 651, 953, 996, 1119, 1542, 1689, 2112
Bso31I GGTCTC 2 cut(s) 26, 753
BsoBI CYCGRG 3 cut(s) 816, 1653, 2223
Bsp1720I GCTNAGC 2 cut(s) 471, 2314
Bsp19I CCATGG 2 cut(s) 948, 2237
BspACI CCGC 5 cut(s) 1375, 1377, 1945, 1947, 2601
BspANI GGCC 7 cut(s) 651, 953, 996, 1119, 1542, 1689, 2112
BspCNI CTCAG 6 cut(s) 172, 280, 454, 1291, 1861, 2327
BspFNI CGCG 2 cut(s) 1377, 1947
BspHI TCATGA 4 cut(s) 348, 724, 1243, 1813
BspLI GGNNCC 6 cut(s) 206, 230, 427, 510, 518, 2500
BspMI ACCTGC 3 cut(s) 80, 2297, 2679
BspPI GGATC 6 cut(s) 199, 212, 1606, 2176, 2249, 2599
BspTI CTTAAG 2 cut(s) 1631, 2201
BspTNI GGTCTC 2 cut(s) 26, 753
BsrDI GCAATG 4 cut(s) 1439, 2009, 2604, 2630
BsrI ACTGG 2 cut(s) 521, 2284
BssNI GRCGYC 1 cut(s) 2447
BssT1I CCWWGG 5 cut(s) 512, 948, 1182, 1752, 2237
Bst2UI CCWGG 1 cut(s) 138
Bst4CI ACNGT 9 cut(s) 358, 503, 834, 926, 1280, 1609, 1850, 2179, 2514
Bst6I CTCTTC 3 cut(s) 46, 751, 2509
BstACI GRCGYC 1 cut(s) 2447
BstAFI CTTAAG 2 cut(s) 1631, 2201
BstAPI GCANNNNNTGC 3 cut(s) 1280, 1850, 2534
BstC8I GCNNGC 1 cut(s) 856
BstDSI CCRYGG 5 cut(s) 312, 948, 1375, 1945, 2237
BstENI CCTNNNNNAGG 2 cut(s) 1631, 2201
BstFNI CGCG 2 cut(s) 1377, 1947
BstMAI GTCTC 4 cut(s) 26, 541, 614, 753
BstMCI CGRYCG 1 cut(s) 674
BstNI CCWGG 1 cut(s) 138
BstNSI RCATGY 2 cut(s) 934, 2772
BstSCI CCNGG 2 cut(s) 136, 289
BstUI CGCG 2 cut(s) 1377, 1947
BstV1I GCAGC 5 cut(s) 61, 445, 959, 1471, 2041
BstV2I GAAGAC 2 cut(s) 1350, 1920
BstX2I RGATCY 1 cut(s) 204
BstXI CCANNNNNNTGG 2 cut(s) 1550, 2120
BstYI RGATCY 1 cut(s) 204
Bsu36I CCTNAGG 1 cut(s) 2320
BsuI GTATCC 5 cut(s) 474, 1150, 1547, 1720, 2117
BsuRI GGCC 7 cut(s) 651, 953, 996, 1119, 1542, 1689, 2112
BtgI CCRYGG 5 cut(s) 312, 948, 1375, 1945, 2237
BtrI CACGTC 2 cut(s) 1348, 1918
BtsI GCAGTG 1 cut(s) 482
BtsIMutI CAGTG 8 cut(s) 482, 508, 1296, 1614, 1866, 2184, 2277, 2510
BveI ACCTGC 3 cut(s) 80, 2297, 2679
Cac8I GCNNGC 1 cut(s) 856
CaiI CAGNNNCTG 2 cut(s) 1453, 2023
CciI TCATGA 4 cut(s) 348, 724, 1243, 1813
Cfr13I GGNCC 5 cut(s) 516, 1118, 1540, 1688, 2110
Cfr42I CCGCGG 2 cut(s) 1378, 1948
Csp6I GTAC 9 cut(s) 668, 791, 1013, 1393, 1963, 2275, 2401, 2540, 2680
CspCI CAANNNNNGTGG 2 cut(s) 2327, 2362
CviQI GTAC 9 cut(s) 668, 791, 1013, 1393, 1963, 2275, 2401, 2540, 2680
DraIII CACNNNGTG 2 cut(s) 1302, 1872
DrdI GACNNNNNNGTC 1 cut(s) 590
DseDI GACNNNNNNGTC 1 cut(s) 590
EaeI YGGCCR 1 cut(s) 951
Eam1104I CTCTTC 3 cut(s) 46, 751, 2509
EarI CTCTTC 3 cut(s) 46, 751, 2509
Eco130I CCWWGG 5 cut(s) 512, 948, 1182, 1752, 2237
Eco31I GGTCTC 2 cut(s) 26, 753
Eco47I GGWCC 1 cut(s) 516
Eco57I CTGAAG 2 cut(s) 1430, 2000
Eco81I CCTNAGG 1 cut(s) 2320
Eco88I CYCGRG 3 cut(s) 816, 1653, 2223
EcoNI CCTNNNNNAGG 2 cut(s) 1631, 2201
EcoO109I RGGNCCY 1 cut(s) 516
EcoRI GAATTC 3 cut(s) 1091, 1661, 2492
EcoRII CCWGG 1 cut(s) 136
EcoT14I CCWWGG 5 cut(s) 512, 948, 1182, 1752, 2237
EcoT22I ATGCAT 1 cut(s) 871
ErhI CCWWGG 5 cut(s) 512, 948, 1182, 1752, 2237
FalI AAGNNNNNCTT 4 cut(s) 1399, 1431, 1969, 2001
FaqI GGGAC 2 cut(s) 502, 713
FauNDI CATATG 3 cut(s) 1561, 2131, 2257
FbaI TGATCA 1 cut(s) 721
FblI GTMKAC 1 cut(s) 921
Fnu4HI GCNGC 8 cut(s) 75, 459, 973, 1375, 1460, 1945, 2030, 2602
Fsp4HI GCNGC 8 cut(s) 75, 459, 973, 1375, 1460, 1945, 2030, 2602
GluI GCNGC 8 cut(s) 75, 459, 973, 1375, 1460, 1945, 2030, 2602
HaeIII GGCC 7 cut(s) 651, 953, 996, 1119, 1542, 1689, 2112
HapII CCGG 1 cut(s) 290
Hin1I GRCGYC 1 cut(s) 2447
HindIII AAGCTT 2 cut(s) 1413, 1983
HinfI GANTC 8 cut(s) 54, 121, 701, 1259, 1829, 2420, 2462, 2659
HpaII CCGG 1 cut(s) 290
HphI GGTGA 5 cut(s) 202, 830, 1033, 1171, 1741
Hpy188III TCNNGA 8 cut(s) 349, 659, 725, 818, 1244, 1489, 1814, 2059
Hpy99I CGWCG 2 cut(s) 779, 2452
HpyCH4III ACNGT 9 cut(s) 358, 503, 834, 926, 1280, 1609, 1850, 2179, 2514
HpyCH4IV ACGT 7 cut(s) 718, 777, 1128, 1347, 1698, 1917, 2447
HpySE526I ACGT 7 cut(s) 718, 777, 1128, 1347, 1698, 1917, 2447
Hsp92I GRCGYC 1 cut(s) 2447
Ksp22I TGATCA 1 cut(s) 721
KspI CCGCGG 2 cut(s) 1378, 1948
LmnI GCTCC 7 cut(s) 508, 1435, 2005, 2283, 2372, 2498, 2729
Lsp1109I GCAGC 5 cut(s) 61, 445, 959, 1471, 2041
LweI GCATC 7 cut(s) 541, 952, 1130, 1440, 1700, 2010, 2537
MaeII ACGT 7 cut(s) 718, 777, 1128, 1347, 1698, 1917, 2447
MaeIII GTNAC 5 cut(s) 122, 307, 926, 1196, 1766
MfeI CAATTG 2 cut(s) 1338, 1908
MflI RGATCY 1 cut(s) 204
MlsI TGGCCA 1 cut(s) 953
MluNI TGGCCA 1 cut(s) 953
MlyI GAGTC 4 cut(s) 63, 130, 695, 2471
MmeI TCCRAC 9 cut(s) 1111, 1361, 1455, 1457, 1681, 1931, 2025, 2027, 2430
MnlI CCTC 9 cut(s) 218, 448, 1049, 1078, 1637, 1662, 2207, 2232, 2512
Mox20I TGGCCA 1 cut(s) 953
Mph1103I ATGCAT 1 cut(s) 871
MroXI GAANNNNTTC 2 cut(s) 1415, 1985
MscI TGGCCA 1 cut(s) 953
MseI TTAA 5 cut(s) 597, 977, 1632, 2202, 2765
MslI CAYNNNNRTG 1 cut(s) 305
Msp20I TGGCCA 1 cut(s) 953
MspA1I CMGCKG 2 cut(s) 1377, 1947
MspCI CTTAAG 2 cut(s) 1631, 2201
MspI CCGG 1 cut(s) 290
MspR9I CCNGG 2 cut(s) 138, 291
MunI CAATTG 2 cut(s) 1338, 1908
Mva1269I GAATGC 4 cut(s) 871, 1007, 1517, 2087
MvaI CCWGG 1 cut(s) 138
MvnI CGCG 2 cut(s) 1377, 1947
NciI CCSGG 1 cut(s) 291
NcoI CCATGG 2 cut(s) 948, 2237
NdeI CATATG 3 cut(s) 1561, 2131, 2257
NlaIV GGNNCC 6 cut(s) 206, 230, 427, 510, 518, 2500
NmuCI GTSAC 5 cut(s) 122, 307, 926, 1196, 1766
NsiI ATGCAT 1 cut(s) 871
NspI RCATGY 2 cut(s) 934, 2772
PagI TCATGA 4 cut(s) 348, 724, 1243, 1813
PaqCI CACCTGC 1 cut(s) 2297
PciI ACATGT 2 cut(s) 930, 2768
PctI GAATGC 4 cut(s) 871, 1007, 1517, 2087
PdmI GAANNNNTTC 2 cut(s) 1415, 1985
PfeI GAWTC 4 cut(s) 1259, 1829, 2420, 2659
PflMI CCANNNNNTGG 2 cut(s) 1102, 1672
PkrI GCNGC 8 cut(s) 76, 460, 974, 1376, 1461, 1946, 2031, 2603
Ple19I CGATCG 1 cut(s) 674
PleI GAGTC 4 cut(s) 62, 129, 695, 2470
PpsI GAGTC 4 cut(s) 62, 129, 695, 2470
PpuMI RGGWCCY 1 cut(s) 516
PscI ACATGT 2 cut(s) 930, 2768
Psp5II RGGWCCY 1 cut(s) 516
Psp6I CCWGG 1 cut(s) 136
PspGI CCWGG 1 cut(s) 136
PspN4I GGNNCC 6 cut(s) 206, 230, 427, 510, 518, 2500
PspPI GGNCC 5 cut(s) 516, 1118, 1540, 1688, 2110
PspPPI RGGWCCY 1 cut(s) 516
PstNI CAGNNNCTG 2 cut(s) 1453, 2023
PsuI RGATCY 1 cut(s) 204
PvuI CGATCG 1 cut(s) 674
RsaI GTAC 9 cut(s) 669, 792, 1014, 1394, 1964, 2276, 2402, 2541, 2681
RsaNI GTAC 9 cut(s) 668, 791, 1013, 1393, 1963, 2275, 2401, 2540, 2680
RseI CAYNNNNRTG 1 cut(s) 305
SacII CCGCGG 2 cut(s) 1378, 1948
SaqAI TTAA 5 cut(s) 597, 977, 1632, 2202, 2765
SatI GCNGC 8 cut(s) 75, 459, 973, 1375, 1460, 1945, 2030, 2602
Sau96I GGNCC 5 cut(s) 516, 1118, 1540, 1688, 2110
ScaI AGTACT 1 cut(s) 2541
SchI GAGTC 4 cut(s) 63, 130, 695, 2471
ScrFI CCNGG 2 cut(s) 138, 291
SfaNI GCATC 7 cut(s) 541, 952, 1130, 1440, 1700, 2010, 2537
Sfr303I CCGCGG 2 cut(s) 1378, 1948
SgrBI CCGCGG 2 cut(s) 1378, 1948
SinI GGWCC 1 cut(s) 516
SmiMI CAYNNNNRTG 1 cut(s) 305
SmlI CTYRAG 2 cut(s) 1631, 2201
SmoI CTYRAG 2 cut(s) 1631, 2201
SsiI CCGC 5 cut(s) 1375, 1377, 1945, 1947, 2601
SspI AATATT 1 cut(s) 892
StyD4I CCNGG 2 cut(s) 136, 289
StyI CCWWGG 5 cut(s) 512, 948, 1182, 1752, 2237
TaaI ACNGT 9 cut(s) 358, 503, 834, 926, 1280, 1609, 1850, 2179, 2514
TaiI ACGT 7 cut(s) 721, 780, 1131, 1350, 1701, 1920, 2450
TaqI TCGA 5 cut(s) 630, 674, 774, 2388, 2741
TatI WGTACW 5 cut(s) 790, 1392, 1962, 2274, 2539
TauI GCSGC 3 cut(s) 1377, 1947, 2604
TfiI GAWTC 4 cut(s) 1259, 1829, 2420, 2659
Tru1I TTAA 5 cut(s) 597, 977, 1632, 2202, 2765
Tru9I TTAA 5 cut(s) 597, 977, 1632, 2202, 2765
TscAI CASTG 8 cut(s) 482, 508, 1303, 1614, 1873, 2184, 2284, 2517
TseFI GTSAC 5 cut(s) 122, 307, 926, 1196, 1766
TseI GCWGC 5 cut(s) 74, 458, 972, 1459, 2029
Tsp45I GTSAC 5 cut(s) 122, 307, 926, 1196, 1766
TspGWI ACGGA 1 cut(s) 2509
TspRI CASTG 8 cut(s) 482, 508, 1303, 1614, 1873, 2184, 2284, 2517
Van91I CCANNNNNTGG 2 cut(s) 1102, 1672
Vha464I CTTAAG 2 cut(s) 1631, 2201
VpaK11BI GGWCC 1 cut(s) 516
XagI CCTNNNNNAGG 2 cut(s) 1631, 2201
XapI RAATTY 8 cut(s) 1027, 1091, 1582, 1661, 2152, 2492, 2545, 2637
XceI RCATGY 2 cut(s) 934, 2772
XcmI CCANNNNNNNNNTGG 2 cut(s) 1103, 1673
XmiI GTMKAC 1 cut(s) 921
XmnI GAANNNNTTC 2 cut(s) 1415, 1985
ZraI GACGTC 1 cut(s) 2448
ZrmI AGTACT 1 cut(s) 2541
Zsp2I ATGCAT 1 cut(s) 871
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.