MD03G1029000.v1.1

Belongs to the glycosyltransferase 2 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000273
Physical Location & Seq
Reverse (-)
2360999 .. 2366551
5553 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1029000.v1.1.491

Sequence Viewer

Length: 2211 bp
ATGGGAAGTGAAGGGTACATACCATTGTACGAGACGAGGAGAGCCAAGGGAACAGTCCTGTATAGGGTTTTTGCAGCATCTAATTTTGCAGGAATATGTTTGATTTGGATTTATAGATTGTGTCACATACCAAAAGAAGGAGAAGATGGAAGGTTTGCTTGGATTGGACTTTTGGGTGCTGAGATATGGTTTGGTTTTTACTGGCTCCTCACTCATGCCTGCCGATGGAACCGTGTGCATAGGCACACCTTCAAAGACAGGCTTTCTCAAAGATATGAAAATGAGTTGCCGGGAGTGGATGTATTTGTGTGCACAGCGGACGCAACCATGGAGCCACCAATGATGGTGATTAACACGGTTTTGTCAGTGATGGCTTATGATTACCCGCCGGAGAAGCTGAGCGTCTATCTGTCCGATGATGGCGGGTCGGAACTTACATACTATGCTCTCTTGGAGGCCGCTGAATTTGCAAAGCATTGGATACCATATTGCAAGAGGTACAGAGTGGAGCCAAGGTCACCTGCTGCTTATTTTGTCACAGTAGCTACTGATGCAATTGATCATCATCAGGCCGAAGATTTCTGGGTTATTAAGAAATTATACAAAGAAATGGAGAATCAAATCCAAAATGCAGTGAAGCTAGGCAGAATTTCAGAAAAAGAACGATCAAAATGCAAAGGCTTTTCTCAGTGGGATCCAGATTCATCTAGACGTGACCATGACACCATTCTTCGAATTCTAATCGATGGGAGAAACCCTAATTCAAGAGATGTTGAAGGGTGTGTATTGCCAACTTTAGTGTATTTAGCTCGGGAGAAAAGGCCTCAGCATCACCATAACTTCAAAGCTGGCGCTATGAATGCTCTGATTAGGGTATCTTCAAACATTAGCAATGGGCAGGTCATTCTTAATGTAGACTGCGATATGTATTCGAACAATTCCATGGCCATACGTGATGCGCTTTGTTTCTTAATGGATGAAGAAGAAGGCCAAGAGGTTGCCTTCGTACAGTTCCCACAGAATTTTGAAAATATAACTAAAAATGATTTGTATGGCAATACTTTACGTGTAATCTTCGAGGTGGAATTCCATGGCATGGATGGTTATGGCGGCACTCTGTATGTCGGAACTGGATGCTTTCACAGAAGAGAGACTCTTTGTGGGAGAAAGTTTATCAAGGGATCCAAGTTTGATATGAAAAGGGAGATCAGCGGACAAAGAGAAGAAAGTAGAATTCATGAATTAGAAGAAAATTCAAGAAGTCTTGCAAGCTGTACATTTGAAGAGAACACTCAATGGGGAAAAGAGATGGGATTGAAATATGGATGTCCGGTAGAAGATGTGATCACAGGGCTATCAATCCAATGCCATGGTTGGAAATCAGTGTATTGCAATCCCACAAGGAAAGCTTTCTTAGGAGTAGCCCCAAGTACGCTAACTCAGACGCTTGTGCAGCATAAGAGATGGACAGAAGGCGATTTCCAGATTTTGTTTACTAAATACAGCCCTGCATGGTATGCACATGGAAAAATTAGCTTTGGTCTTCAACTTGGATATTGTTGCTTCTCCTTCTGGTGTTCGAATTCCTTGGCAACGTTATTTTATTCGATTGTCCCTTCCCTTTACCTCCTCAAAGGCATTTCCTTATTTCCACAGGTCTCGAGCCCTTGGTTCATACCATTTGCATACGTGATAATTTCGAAGTACACTTGGAGTTTTGTTGAGTTTTTGGGGTGTGGTGGCACAATCTTAGGTTGGTGGAACGATCAACGAATGTGGCTTTACAAGAGAACAAGTTCCTACCTATTTGCCTTCATTGACACCATTTTAAACTCGCTTGGATATTCTGATACAGCATTCATATTAACATCTAAGGTGGATGACGAAGATGTGTCAGAACGATACAAGAAAGAGGTTATGGAATTTGGAGATTCGTCGCCAATGTTTACCATACTTGCAACACTAGCAATTCTCAATTTGTACTGCTTCCTTGGGTTTTTAAACAAAGCAATCTCTGGAGAAGGAATAGCAGAAGCTTATGAGAAAATGCCTTTGCAAATTCTTCTGTGTGGGGTTTTAGTTCTTCTCAACCTACCATTATACCAGGCTCTTTACCTAAGGAAGGACAAGGGAAAGCTGCCAAGCTCTGTAGCTTTTAAATCAATGGCATTTGCAGTATCTGCTTGTATCTGTTTCCAATATTTATATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cellulose_synt

Protein Analysis

737

Amino Acids

84.33

Weight (kDa)

6.64

Isoelectric Point (pI)

40.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cellulose_synt PF03552 99 - 397 3.3e-95 Cellulose synthase
Cellulose_synt PF03552 418 - 725 1.9e-43 Cellulose synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000273)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G55850
fragaria_vesca FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 529
Acc36I ACCTGC 2 cut(s) 529, 889
AccB7I CCANNNNNTGG 1 cut(s) 1096
AccI GTMKAC 1 cut(s) 915
AciI CCGC 6 cut(s) 317, 386, 423, 459, 1110, 1212
AclI AACGTT 1 cut(s) 1595
AclWI GGATC 4 cut(s) 689, 702, 1176, 1189
AcoI YGGCCR 1 cut(s) 945
AfaI GTAC 8 cut(s) 17, 29, 500, 1008, 1276, 1432, 1706, 1982
AfiI CCNNNNNNNGG 5 cut(s) 64, 137, 225, 1096, 2122
AflIII ACRYGT 1 cut(s) 1066
AjiI CACGTC 1 cut(s) 713
AjnI CCWGG 1 cut(s) 2103
AjuI GAANNNNNNNTTGG 2 cut(s) 142, 174
Alw21I GWGCWC 1 cut(s) 314
Alw26I GTCTC 3 cut(s) 26, 1145, 1663
Alw44I GTGCAC 1 cut(s) 310
AlwI GGATC 4 cut(s) 689, 702, 1176, 1189
AlwNI CAGNNNCTG 1 cut(s) 2180
Ama87I CYCGRG 2 cut(s) 810, 1660
AoxI GGCC 5 cut(s) 456, 570, 821, 945, 988
ApaLI GTGCAC 1 cut(s) 310
ApeKI GCWGC 4 cut(s) 74, 524, 1453, 2137
Asp700I GAANNNNTTC 2 cut(s) 1409, 1795
AspLEI GCGC 2 cut(s) 854, 961
AsuC2I CCSGG 1 cut(s) 291
AsuHPI GGTGA 3 cut(s) 358, 510, 824
AsuII TTCGAA 4 cut(s) 733, 932, 1580, 1700
AvaI CYCGRG 2 cut(s) 810, 1660
AxyI CCTNAGG 1 cut(s) 2117
BaeGI GKGCMC 1 cut(s) 314
BalI TGGCCA 1 cut(s) 947
BamHI GGATCC 2 cut(s) 694, 1181
BanII GRGCYC 1 cut(s) 1667
BarI GAAGNNNNNNTAC 1 cut(s) 35
BbsI GAAGAC 1 cut(s) 1535
Bbv12I GWGCWC 1 cut(s) 314
BbvCI CCTCAGC 1 cut(s) 825
BbvI GCAGC 4 cut(s) 86, 511, 1465, 2124
BccI CCATC 9 cut(s) 140, 219, 337, 364, 413, 740, 1094, 1303, 1458
BcgI CGANNNNNNTGC 2 cut(s) 654, 688
BciT130I CCWGG 1 cut(s) 2105
BciVI GTATCC 1 cut(s) 474
BclI TGATCA 2 cut(s) 559, 1344
BcnI CCSGG 1 cut(s) 291
BcoDI GTCTC 3 cut(s) 26, 1145, 1663
BfaI CTAG 3 cut(s) 641, 708, 1964
BfmI CTRYAG 1 cut(s) 2148
BfoI RGCGCY 1 cut(s) 855
BfuAI ACCTGC 2 cut(s) 529, 889
BfuI GTATCC 1 cut(s) 474
BisI GCNGC 6 cut(s) 75, 459, 525, 1111, 1454, 2138
BlpI GCTNAGC 1 cut(s) 398
BlsI GCNGC 6 cut(s) 76, 460, 526, 1112, 1455, 2139
Bme1390I CCNGG 2 cut(s) 291, 2105
BmeT110I CYCGRG 2 cut(s) 810, 1660
BmgBI CACGTC 1 cut(s) 713
BmiI GGNNCC 6 cut(s) 206, 230, 333, 510, 696, 1183
BmrFI CCNGG 2 cut(s) 291, 2105
BmsI GCATC 5 cut(s) 86, 541, 838, 946, 1124
BpiI GAAGAC 1 cut(s) 1535
BpmI CTGGAG 1 cut(s) 2037
Bpu10I CCTNAGC 1 cut(s) 825
Bpu1102I GCTNAGC 1 cut(s) 398
Bpu14I TTCGAA 4 cut(s) 733, 932, 1580, 1700
BpuMI CCSGG 1 cut(s) 291
Bsa29I ATCGAT 1 cut(s) 744
BsaAI YACGTR 3 cut(s) 953, 1067, 1690
BsaBI GATNNNNATC 1 cut(s) 564
BsaI GGTCTC 1 cut(s) 1663
BsaJI CCNNGG 9 cut(s) 45, 327, 512, 942, 1090, 1369, 1587, 1667, 1990
BsaWI WCCGGW 1 cut(s) 1330
BsaXI ACNNNNNCTCC 4 cut(s) 285, 315, 500, 530
Bsc4I CCNNNNNNNGG 5 cut(s) 64, 137, 225, 1096, 2122
Bse1I ACTGG 2 cut(s) 206, 1135
Bse21I CCTNAGG 1 cut(s) 2117
Bse3DI GCAATG 1 cut(s) 898
Bse8I GATNNNNATC 1 cut(s) 564
BseBI CCWGG 1 cut(s) 2105
BseCI ATCGAT 1 cut(s) 744
BseDI CCNNGG 9 cut(s) 45, 327, 512, 942, 1090, 1369, 1587, 1667, 1990
BseGI GGATG 6 cut(s) 304, 982, 1105, 1139, 1331, 1885
BseJI GATNNNNATC 1 cut(s) 564
BseLI CCNNNNNNNGG 5 cut(s) 64, 137, 225, 1096, 2122
BseMI GCAATG 1 cut(s) 898
BseMII CTCAG 5 cut(s) 171, 389, 701, 839, 1454
BseNI ACTGG 2 cut(s) 206, 1135
BseRI GAGGAG 3 cut(s) 52, 197, 1619
BseSI GKGCMC 1 cut(s) 314
BseXI GCAGC 4 cut(s) 86, 511, 1465, 2124
BsgI GTGCAG 1 cut(s) 1472
BshFI GGCC 5 cut(s) 458, 572, 823, 947, 990
BshVI ATCGAT 1 cut(s) 744
BsiHKAI GWGCWC 1 cut(s) 314
BsiHKCI CYCGRG 2 cut(s) 810, 1660
BsiSI CCGG 3 cut(s) 290, 389, 1331
BslFI GGGAC 1 cut(s) 1598
BslI CCNNNNNNNGG 5 cut(s) 64, 137, 225, 1096, 2122
BsmAI GTCTC 3 cut(s) 26, 1145, 1663
BsmBI CGTCTC 1 cut(s) 26
BsmFI GGGAC 1 cut(s) 1598
BsmI GAATGC 2 cut(s) 865, 1856
BsnI GGCC 5 cut(s) 458, 572, 823, 947, 990
Bso31I GGTCTC 1 cut(s) 1663
BsoBI CYCGRG 2 cut(s) 810, 1660
Bsp119I TTCGAA 4 cut(s) 733, 932, 1580, 1700
Bsp1286I GDGCHC 2 cut(s) 314, 1667
Bsp1407I TGTACA 1 cut(s) 1274
Bsp143I GATC 7 cut(s) 559, 665, 694, 1181, 1206, 1344, 1765
Bsp1720I GCTNAGC 1 cut(s) 398
Bsp19I CCATGG 4 cut(s) 327, 942, 1090, 1369
BspACI CCGC 6 cut(s) 317, 386, 423, 459, 1110, 1212
BspANI GGCC 5 cut(s) 458, 572, 823, 947, 990
BspCNI CTCAG 5 cut(s) 172, 390, 700, 838, 1453
BspDI ATCGAT 1 cut(s) 744
BspHI TCATGA 1 cut(s) 1237
BspLI GGNNCC 6 cut(s) 206, 230, 333, 510, 696, 1183
BspMI ACCTGC 2 cut(s) 529, 889
BspPI GGATC 4 cut(s) 689, 702, 1176, 1189
BspT104I TTCGAA 4 cut(s) 733, 932, 1580, 1700
BspTNI GGTCTC 1 cut(s) 1663
BsrDI GCAATG 1 cut(s) 898
BsrGI TGTACA 1 cut(s) 1274
BsrI ACTGG 2 cut(s) 206, 1135
BssECI CCNNGG 9 cut(s) 45, 327, 512, 942, 1090, 1369, 1587, 1667, 1990
BssMI GATC 7 cut(s) 559, 665, 694, 1181, 1206, 1344, 1765
BssT1I CCWWGG 9 cut(s) 45, 327, 512, 942, 1090, 1369, 1587, 1667, 1990
Bst2UI CCWGG 1 cut(s) 2105
Bst4CI ACNGT 5 cut(s) 55, 233, 358, 541, 1011
Bst6I CTCTTC 2 cut(s) 1141, 1278
BstAPI GCANNNNNTGC 2 cut(s) 1517, 2180
BstAUI TGTACA 1 cut(s) 1274
BstBAI YACGTR 3 cut(s) 953, 1067, 1690
BstBI TTCGAA 4 cut(s) 733, 932, 1580, 1700
BstC8I GCNNGC 3 cut(s) 220, 850, 1270
BstDEI CTNAG 9 cut(s) 180, 398, 687, 825, 1414, 1440, 1750, 1872, 2117
BstDSI CCRYGG 4 cut(s) 327, 942, 1090, 1369
BstEII GGTNACC 1 cut(s) 516
BstENI CCTNNNNNAGG 1 cut(s) 2120
BstF5I GGATG 6 cut(s) 304, 982, 1105, 1139, 1331, 1885
BstH2I RGCGCY 1 cut(s) 855
BstHHI GCGC 2 cut(s) 854, 961
BstKTI GATC 7 cut(s) 562, 668, 697, 1184, 1209, 1347, 1768
BstMAI GTCTC 3 cut(s) 26, 1145, 1663
BstMBI GATC 7 cut(s) 559, 665, 694, 1181, 1206, 1344, 1765
BstMWI GCNNNNNNNGC 8 cut(s) 394, 467, 551, 860, 1453, 1517, 1964, 2180
BstNI CCWGG 1 cut(s) 2105
BstPI GGTNACC 1 cut(s) 516
BstSCI CCNGG 2 cut(s) 289, 2103
BstSFI CTRYAG 1 cut(s) 2148
BstSLI GKGCMC 1 cut(s) 314
BstV1I GCAGC 4 cut(s) 86, 511, 1465, 2124
BstV2I GAAGAC 1 cut(s) 1535
BstX2I RGATCY 2 cut(s) 694, 1181
BstXI CCANNNNNNTGG 1 cut(s) 1370
BstYI RGATCY 2 cut(s) 694, 1181
Bsu15I ATCGAT 1 cut(s) 744
Bsu36I CCTNAGG 1 cut(s) 2117
BsuI GTATCC 1 cut(s) 474
BsuRI GGCC 5 cut(s) 458, 572, 823, 947, 990
BsuTUI ATCGAT 1 cut(s) 744
BtgI CCRYGG 4 cut(s) 327, 942, 1090, 1369
BtrI CACGTC 1 cut(s) 713
BtsCI GGATG 6 cut(s) 304, 982, 1105, 1139, 1331, 1885
BtsI GCAGTG 1 cut(s) 639
BtsIMutI CAGTG 4 cut(s) 372, 639, 695, 1389
BveI ACCTGC 2 cut(s) 529, 889
Cac8I GCNNGC 3 cut(s) 220, 850, 1270
CaiI CAGNNNCTG 1 cut(s) 2180
CciI TCATGA 1 cut(s) 1237
CfoI GCGC 2 cut(s) 854, 961
ClaI ATCGAT 1 cut(s) 744
CseI GACGC 3 cut(s) 329, 391, 1453
Csp6I GTAC 8 cut(s) 16, 28, 499, 1007, 1275, 1431, 1705, 1981
CspCI CAANNNNNGTGG 2 cut(s) 1757, 1792
CviQI GTAC 8 cut(s) 16, 28, 499, 1007, 1275, 1431, 1705, 1981
DdeI CTNAG 9 cut(s) 180, 398, 687, 825, 1414, 1440, 1750, 1872, 2117
DpnI GATC 7 cut(s) 561, 667, 696, 1183, 1208, 1346, 1767
DpnII GATC 7 cut(s) 559, 665, 694, 1181, 1206, 1344, 1765
DraI TTTAAA 3 cut(s) 1830, 2001, 2158
EaeI YGGCCR 1 cut(s) 945
Eam1104I CTCTTC 2 cut(s) 1141, 1278
EarI CTCTTC 2 cut(s) 1141, 1278
Eco130I CCWWGG 9 cut(s) 45, 327, 512, 942, 1090, 1369, 1587, 1667, 1990
Eco147I AGGCCT 1 cut(s) 823
Eco24I GRGCYC 1 cut(s) 1667
Eco31I GGTCTC 1 cut(s) 1663
Eco81I CCTNAGG 1 cut(s) 2117
Eco88I CYCGRG 2 cut(s) 810, 1660
Eco91I GGTNACC 1 cut(s) 516
EcoNI CCTNNNNNAGG 1 cut(s) 2120
EcoO65I GGTNACC 1 cut(s) 516
EcoRI GAATTC 4 cut(s) 735, 1085, 1233, 1582
EcoRII CCWGG 1 cut(s) 2103
EcoT14I CCWWGG 9 cut(s) 45, 327, 512, 942, 1090, 1369, 1587, 1667, 1990
EcoT38I GRGCYC 1 cut(s) 1667
ErhI CCWWGG 9 cut(s) 45, 327, 512, 942, 1090, 1369, 1587, 1667, 1990
Esp3I CGTCTC 1 cut(s) 26
FalI AAGNNNNNCTT 6 cut(s) 142, 174, 246, 278, 1393, 1425
FaqI GGGAC 1 cut(s) 1598
FauI CCCGC 2 cut(s) 393, 416
FbaI TGATCA 2 cut(s) 559, 1344
FblI GTMKAC 1 cut(s) 915
Fnu4HI GCNGC 6 cut(s) 75, 459, 525, 1111, 1454, 2138
FokI GGATG 6 cut(s) 311, 989, 1112, 1146, 1338, 1892
FriOI GRGCYC 1 cut(s) 1667
Fsp4HI GCNGC 6 cut(s) 75, 459, 525, 1111, 1454, 2138
FspBI CTAG 3 cut(s) 641, 708, 1964
GlaI GCGC 2 cut(s) 853, 960
GluI GCNGC 6 cut(s) 75, 459, 525, 1111, 1454, 2138
GsuI CTGGAG 1 cut(s) 2037
HaeII RGCGCY 1 cut(s) 855
HaeIII GGCC 5 cut(s) 458, 572, 823, 947, 990
HapII CCGG 3 cut(s) 290, 389, 1331
HgaI GACGC 3 cut(s) 329, 391, 1453
HhaI GCGC 2 cut(s) 854, 961
Hin6I GCGC 2 cut(s) 852, 959
HinP1I GCGC 2 cut(s) 852, 959
HindIII AAGCTT 2 cut(s) 1407, 2034
HinfI GANTC 4 cut(s) 616, 701, 1153, 1931
HpaII CCGG 3 cut(s) 290, 389, 1331
HphI GGTGA 3 cut(s) 358, 510, 824
Hpy166II GTNNAC 5 cut(s) 312, 916, 1494, 1707, 1947
Hpy188I TCNGA 8 cut(s) 415, 430, 655, 867, 1127, 1443, 1849, 1897
Hpy188III TCNNGA 9 cut(s) 698, 708, 765, 812, 1238, 1257, 1483, 1660, 2016
Hpy8I GTNNAC 5 cut(s) 312, 916, 1494, 1707, 1947
Hpy99I CGWCG 1 cut(s) 1939
HpyCH4III ACNGT 5 cut(s) 55, 233, 358, 541, 1011
HpyCH4IV ACGT 5 cut(s) 712, 952, 1066, 1595, 1689
HpyF10VI GCNNNNNNNGC 8 cut(s) 394, 467, 551, 860, 1453, 1517, 1964, 2180
HpyF3I CTNAG 9 cut(s) 180, 398, 687, 825, 1414, 1440, 1750, 1872, 2117
HpySE526I ACGT 5 cut(s) 712, 952, 1066, 1595, 1689
HspAI GCGC 2 cut(s) 852, 959
Ksp22I TGATCA 2 cut(s) 559, 1344
Kzo9I GATC 7 cut(s) 559, 665, 694, 1181, 1206, 1344, 1765
LmnI GCTCC 3 cut(s) 210, 331, 508
Lsp1109I GCAGC 4 cut(s) 86, 511, 1465, 2124
LweI GCATC 5 cut(s) 86, 541, 838, 946, 1124
MaeI CTAG 3 cut(s) 641, 708, 1964
MaeII ACGT 5 cut(s) 712, 952, 1066, 1595, 1689
MaeIII GTNAC 4 cut(s) 122, 516, 535, 713
MalI GATC 7 cut(s) 561, 667, 696, 1183, 1208, 1346, 1767
MboI GATC 7 cut(s) 559, 665, 694, 1181, 1206, 1344, 1765
MfeI CAATTG 1 cut(s) 555
MflI RGATCY 2 cut(s) 694, 1181
MhlI GDGCHC 2 cut(s) 314, 1667
MlsI TGGCCA 1 cut(s) 947
MluNI TGGCCA 1 cut(s) 947
MlyI GAGTC 1 cut(s) 1147
MmeI TCCRAC 3 cut(s) 408, 1105, 1355
Mox20I TGGCCA 1 cut(s) 947
MroXI GAANNNNTTC 2 cut(s) 1409, 1795
MscI TGGCCA 1 cut(s) 947
MseI TTAA 8 cut(s) 351, 591, 909, 971, 1829, 1865, 2000, 2157
Msp20I TGGCCA 1 cut(s) 947
MspA1I CMGCKG 3 cut(s) 317, 461, 1212
MspI CCGG 3 cut(s) 290, 389, 1331
MspR9I CCNGG 2 cut(s) 291, 2105
MunI CAATTG 1 cut(s) 555
Mva1269I GAATGC 2 cut(s) 865, 1856
MvaI CCWGG 1 cut(s) 2105
MwoI GCNNNNNNNGC 8 cut(s) 394, 467, 551, 860, 1453, 1517, 1964, 2180
NciI CCSGG 1 cut(s) 291
NcoI CCATGG 4 cut(s) 327, 942, 1090, 1369
NdeII GATC 7 cut(s) 559, 665, 694, 1181, 1206, 1344, 1765
NlaIV GGNNCC 6 cut(s) 206, 230, 333, 510, 696, 1183
NmuCI GTSAC 4 cut(s) 122, 516, 535, 713
NspV TTCGAA 4 cut(s) 733, 932, 1580, 1700
PaeR7I CTCGAG 1 cut(s) 1660
PagI TCATGA 1 cut(s) 1237
PaqCI CACCTGC 1 cut(s) 529
PceI AGGCCT 1 cut(s) 823
PctI GAATGC 2 cut(s) 865, 1856
PdmI GAANNNNTTC 2 cut(s) 1409, 1795
PfeI GAWTC 3 cut(s) 616, 701, 1931
PflMI CCANNNNNTGG 1 cut(s) 1096
PkrI GCNGC 6 cut(s) 76, 460, 526, 1112, 1455, 2139
PleI GAGTC 1 cut(s) 1147
PpsI GAGTC 1 cut(s) 1147
Ppu21I YACGTR 3 cut(s) 953, 1067, 1690
Psp1406I AACGTT 1 cut(s) 1595
Psp6I CCWGG 1 cut(s) 2103
PspEI GGTNACC 1 cut(s) 516
PspGI CCWGG 1 cut(s) 2103
PspN4I GGNNCC 6 cut(s) 206, 230, 333, 510, 696, 1183
PstNI CAGNNNCTG 1 cut(s) 2180
PsuI RGATCY 2 cut(s) 694, 1181
RsaI GTAC 8 cut(s) 17, 29, 500, 1008, 1276, 1432, 1706, 1982
RsaNI GTAC 8 cut(s) 16, 28, 499, 1007, 1275, 1431, 1705, 1981
SaqAI TTAA 8 cut(s) 351, 591, 909, 971, 1829, 1865, 2000, 2157
SatI GCNGC 6 cut(s) 75, 459, 525, 1111, 1454, 2138
Sau3AI GATC 7 cut(s) 559, 665, 694, 1181, 1206, 1344, 1765
SchI GAGTC 1 cut(s) 1147
ScrFI CCNGG 2 cut(s) 291, 2105
SduI GDGCHC 2 cut(s) 314, 1667
SfaNI GCATC 5 cut(s) 86, 541, 838, 946, 1124
SfcI CTRYAG 1 cut(s) 2148
Sfr274I CTCGAG 1 cut(s) 1660
SfuI TTCGAA 4 cut(s) 733, 932, 1580, 1700
SlaI CTCGAG 1 cut(s) 1660
SmlI CTYRAG 1 cut(s) 1660
SmoI CTYRAG 1 cut(s) 1660
SseBI AGGCCT 1 cut(s) 823
SsiI CCGC 6 cut(s) 317, 386, 423, 459, 1110, 1212
SspI AATATT 1 cut(s) 2201
SspMI CTAG 3 cut(s) 641, 708, 1964
StuI AGGCCT 1 cut(s) 823
StyD4I CCNGG 2 cut(s) 289, 2103
StyI CCWWGG 9 cut(s) 45, 327, 512, 942, 1090, 1369, 1587, 1667, 1990
TaaI ACNGT 5 cut(s) 55, 233, 358, 541, 1011
TaiI ACGT 5 cut(s) 715, 955, 1069, 1598, 1692
TaqI TCGA 8 cut(s) 733, 744, 932, 1077, 1580, 1607, 1661, 1700
TatI WGTACW 3 cut(s) 1274, 1704, 1980
TauI GCSGC 2 cut(s) 461, 1113
TfiI GAWTC 3 cut(s) 616, 701, 1931
Tru1I TTAA 8 cut(s) 351, 591, 909, 971, 1829, 1865, 2000, 2157
Tru9I TTAA 8 cut(s) 351, 591, 909, 971, 1829, 1865, 2000, 2157
TscAI CASTG 4 cut(s) 372, 639, 695, 1389
TseFI GTSAC 4 cut(s) 122, 516, 535, 713
TseI GCWGC 4 cut(s) 74, 524, 1453, 2137
Tsp45I GTSAC 4 cut(s) 122, 516, 535, 713
TspRI CASTG 4 cut(s) 372, 639, 695, 1389
Van91I CCANNNNNTGG 1 cut(s) 1096
VneI GTGCAC 1 cut(s) 310
XagI CCTNNNNNAGG 1 cut(s) 2120
XbaI TCTAGA 1 cut(s) 707
XcmI CCANNNNNNNNNTGG 1 cut(s) 1097
XhoI CTCGAG 1 cut(s) 1660
XmiI GTMKAC 1 cut(s) 915
XmnI GAANNNNTTC 2 cut(s) 1409, 1795
XspI CTAG 3 cut(s) 641, 708, 1964
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.