MD03G1029100.v1.1

Belongs to the glycosyltransferase 2 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000273
Physical Location & Seq
Reverse (-)
2369876 .. 2374183
4308 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1029100.v1.1.491

Sequence Viewer

Length: 2220 bp
ATGGGCAAGCAGGAGAGTGGTGGAGAAGGAGAAGAGAGTAGTCTTCCGTTGTTTGAGAGCACAACTGCAAAGTTTAGGGGTATATATAGAGTATTTGCGTCAACAATATTGGTGGGTATATGTTTGATATGGGTGTATAGAGTAACAAACATCCCAAAACCAGGAGAGGCAGGAAGATGGGCTTGGATTGGCATGCTCATAGCTGAGTTCTGGTTTAGCCTGTACTGGATTATAACTCAGTCTGTCCGATGGGACGTTACCTATCGTCGAACTTTCAAGGACAGGCTTTCTCACAGATATGATGACAAGTTACCAGGTGTTGACATTTTTATATGCACTGCAGACCCCAAAATGGAGCCACCAACTTTGGTGGTCAACACTTTGTTATCAGTCCTGGCCTACAATTATCCAACTGAGAAATTGAATGTTTATGTTTCTGATGATGGCGGTTCGGAGTTCACTTTCTACGCGCTCTTAGAGGCCGCCAGTTTCTCCAAGTACTGGACTCCCTTCTGTAAAAAGTTCAATATTGAACCAAGGTCTCCAGAGGCCTACTTTGCCCTGCACTCTGATGTGCATGACATAAAGTATGGTCAGGAATGGTTGGAAATCAAGAAACTTTACGAAGATATGAAGAATCGGATTGAATCTGCTGTTGGAACGGGCAAGATTCCCAAAGAAACAAAGATGCAACACAAAGGGTTCTCAGAGTGGAACCTCAAAGTAGCAAAGAATGATCATCAGCCAATTGTGCAAATTATAACTGATGGAAGAGACACGAACGCCATGGATAATGATGGATGCCGGTTGGCAACAATGGTGTATGTGTCACGAGAAAAAAGACCCCAACAGCCTCACAACTTCAAAGCAGGAGCTGTGAATGCACTGCTGAGAGTGTCATCAGAAATAAGCAAGGCACCCTTCATCCTCCTGCTGGACTGTGACATGTACGCAAACAACGCAGACTCAATACGAGAGGCATTATGCTTTTTCTTGGACGGCAAGTGTGGCCACGAGATTGCTTTCGTGCAACATCCACAAAACTATAACAATCTCACCAAGGACGATATCTATGGAAGTGGATGTTTTGTAGTTAATGCGGTCGAGCTTGCTGGGTTAGGTGGATATGGCGCGGCCTTGTTTTGTGGCACTGGATGTTTCCATCGAAGAGAATGTCTTTTCGGAAAGAAGTATTCCAAGGATTATAGAGGACAATGGAACACAGAGGGCCAAAATACTATTGACAGAAGTATCCAAGAGTTGGAGGAATCTGCAAAAACTCTTATCACTTGTAGCTACGAAAAGGGTACTAAATGGGGAAAAGAGATGGGACTGATGTATGGATGCCCGGTTGAAGATATAGTTTCTGGCTTGGCGATTCAATGTAGGGGATGGAAGTCGATCTATTACAATCCAGAGAGAAAAGGGTTTCTAGGTATTTCTCCAAATACTTTGGATATAGCACTTGTTCAACAAAAAAGGTGGTGTGAGGGCATGTTTCAGATATTTTTCTCCAAGTATTGCCCTTTCATATATGGGCATGGAAAGATAAAGTTGGGTGCCCAAATGGGATATTGTCTCTACCTTTTGTGGGCACCACTTTCCTTCCCAACTATGTATTATGTGGCTGTTCCTCCTCTTTGCTTGCTCCATGGCATTCCCTTGTTCCCAAAGGTGTCAAGTCCATGGTTCCTAGCATTTACTTATGTTTTTGTAGCCAAGAATGTTTACAGCATAATTGAGGCCCTCCATTGTGGTAGTTCACTCAAAGCATGGTGGAACTTACAAAGAATGTGGCTGTTCCGAAGAATTACGTCCTACTTTTTCGCCTTCTTCGATACCATAAAGAGGCAATTGGGGCTATCCGAAACAGATTTTGCCCTCACTGATAAGGTGATGACAGAGGATGTGACAAAGAGGTATGAGCAGGAGGTCATGGAATTTGGAAGTCCAAGCATTATGTATACCGTCTTGGCAACATCAGCGTTGCTAAACTTAATGAGCTTAGTATGGGGAACAAAGAGGGTTGCCATGGATATAGATTCCAAAGCTTCAGAGCAGTTGATCAGTCAAGTTTTTCTTTGTGGCATATTGGTCATGATCAACTTACCGGTGTACCAGGCGCTCTTCTTCCGCAGCGATAAGGGTCATATACCATCGTCTGTCGTGTTCAAGTCTGTTTTGTTGCTTACACTGGCATGCCTGATGCCTATTTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cellulose_synt

Protein Analysis

740

Amino Acids

84.25

Weight (kDa)

8.19

Isoelectric Point (pI)

41.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cellulose_synt PF03552 107 - 400 4.2e-84 Cellulose synthase
Cellulose_synt PF03552 423 - 736 1e-43 Cellulose synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000273)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G55850
fragaria_vesca FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 233, 761
AccB1I GGYRCC 3 cut(s) 916, 1559, 1594
AccB7I CCANNNNNTGG 2 cut(s) 501, 1261
AccI GTMKAC 1 cut(s) 1964
AccII CGCG 2 cut(s) 470, 1133
AciI CCGC 5 cut(s) 447, 483, 1100, 1133, 2134
AcoI YGGCCR 1 cut(s) 1009
AcsI RAATTY 1 cut(s) 1940
AcuI CTGAAG 1 cut(s) 2037
AfaI GTAC 5 cut(s) 224, 500, 950, 1309, 2117
AfiI CCNNNNNNNGG 7 cut(s) 161, 352, 501, 934, 1261, 1591, 1848
AflIII ACRYGT 1 cut(s) 945
AgeI ACCGGT 1 cut(s) 2110
AjnI CCWGG 4 cut(s) 160, 313, 393, 2118
AjuI GAANNNNNNNTTGG 4 cut(s) 166, 198, 639, 671
AluBI AGCT 6 cut(s) 203, 875, 1108, 1296, 2004, 2051
AluI AGCT 6 cut(s) 203, 875, 1108, 1296, 2004, 2051
Alw21I GWGCWC 1 cut(s) 62
Alw26I GTCTC 3 cut(s) 546, 768, 1583
AlwNI CAGNNNCTG 1 cut(s) 875
AoxI GGCC 7 cut(s) 396, 480, 549, 1009, 1134, 1228, 1743
ApeKI GCWGC 1 cut(s) 2136
ApoI RAATTY 1 cut(s) 1940
ArsI GACNNNNNNTTYG 2 cut(s) 1159, 1191
AsiGI ACCGGT 1 cut(s) 2110
AspLEI GCGC 3 cut(s) 472, 1133, 2125
AspS9I GGNCC 2 cut(s) 1228, 1744
AsuC2I CCSGG 1 cut(s) 1349
AsuHPI GGTGA 2 cut(s) 1048, 1906
BaeGI GKGCMC 2 cut(s) 1564, 1597
BaeI ACNNNNGTAYC 4 cut(s) 1234, 1267, 2099, 2132
BalI TGGCCA 1 cut(s) 1011
BanI GGYRCC 3 cut(s) 916, 1559, 1594
BauI CACGAG 2 cut(s) 831, 1013
BbsI GAAGAC 1 cut(s) 35
Bbv12I GWGCWC 1 cut(s) 62
BbvI GCAGC 1 cut(s) 2148
BccI CCATC 9 cut(s) 171, 243, 437, 761, 791, 1170, 1321, 1386, 2164
BceAI ACGGC 1 cut(s) 1015
BciT130I CCWGG 4 cut(s) 162, 315, 395, 2120
BciVI GTATCC 1 cut(s) 1262
BclI TGATCA 3 cut(s) 736, 2064, 2100
BcnI CCSGG 1 cut(s) 1349
BcoDI GTCTC 3 cut(s) 546, 768, 1583
BfaI CTAG 3 cut(s) 1433, 1694, 2218
BfmI CTRYAG 1 cut(s) 339
BfoI RGCGCY 1 cut(s) 2126
BfuI GTATCC 1 cut(s) 1262
BisI GCNGC 3 cut(s) 483, 1134, 2137
BlsI GCNGC 3 cut(s) 484, 1135, 2138
BmcAI AGTACT 1 cut(s) 500
Bme1390I CCNGG 5 cut(s) 162, 315, 395, 1349, 2120
BmgT120I GGNCC 2 cut(s) 1228, 1744
BmiI GGNNCC 6 cut(s) 357, 716, 918, 1561, 1596, 1691
BmrFI CCNGG 5 cut(s) 162, 315, 395, 1349, 2120
BmsI GCATC 4 cut(s) 678, 791, 1334, 2196
BpiI GAAGAC 1 cut(s) 35
BpmI CTGGAG 1 cut(s) 528
BpuMI CCSGG 1 cut(s) 1349
BsaI GGTCTC 1 cut(s) 546
BsaJI CCNNGG 7 cut(s) 536, 786, 1059, 1197, 1651, 1685, 2031
BsaWI WCCGGW 1 cut(s) 2110
Bsc4I CCNNNNNNNGG 7 cut(s) 161, 352, 501, 934, 1261, 1591, 1848
Bse118I RCCGGY 2 cut(s) 804, 2110
Bse1I ACTGG 5 cut(s) 230, 486, 506, 1156, 2199
BseBI CCWGG 4 cut(s) 162, 315, 395, 2120
BseDI CCNNGG 7 cut(s) 536, 786, 1059, 1197, 1651, 1685, 2031
BseGI GGATG 9 cut(s) 150, 806, 924, 1033, 1088, 1160, 1349, 1397, 1912
BseLI CCNNNNNNNGG 7 cut(s) 161, 352, 501, 934, 1261, 1591, 1848
BseMII CTCAG 5 cut(s) 195, 251, 405, 720, 881
BseNI ACTGG 5 cut(s) 230, 486, 506, 1156, 2199
BseRI GAGGAG 1 cut(s) 1626
BseSI GKGCMC 2 cut(s) 1564, 1597
BseXI GCAGC 1 cut(s) 2148
BseYI CCCAGC 1 cut(s) 1112
BsgI GTGCAG 1 cut(s) 548
Bsh1236I CGCG 2 cut(s) 470, 1133
Bsh1285I CGRYCG 1 cut(s) 1104
BshFI GGCC 7 cut(s) 398, 482, 551, 1011, 1136, 1230, 1745
BshNI GGYRCC 3 cut(s) 916, 1559, 1594
BshTI ACCGGT 1 cut(s) 2110
BsiEI CGRYCG 1 cut(s) 1104
BsiHKAI GWGCWC 1 cut(s) 62
BsiSI CCGG 3 cut(s) 805, 1349, 2111
BslFI GGGAC 2 cut(s) 266, 1344
BslI CCNNNNNNNGG 7 cut(s) 161, 352, 501, 934, 1261, 1591, 1848
BsmAI GTCTC 3 cut(s) 546, 768, 1583
BsmFI GGGAC 2 cut(s) 266, 1344
BsmI GAATGC 2 cut(s) 886, 1656
BsnI GGCC 7 cut(s) 398, 482, 551, 1011, 1136, 1230, 1745
Bso31I GGTCTC 1 cut(s) 546
Bsp1286I GDGCHC 3 cut(s) 62, 1564, 1597
Bsp143I GATC 4 cut(s) 736, 1401, 2064, 2100
Bsp19I CCATGG 4 cut(s) 786, 1651, 1685, 2031
BspACI CCGC 5 cut(s) 447, 483, 1100, 1133, 2134
BspANI GGCC 7 cut(s) 398, 482, 551, 1011, 1136, 1230, 1745
BspCNI CTCAG 5 cut(s) 196, 250, 406, 719, 882
BspFNI CGCG 2 cut(s) 470, 1133
BspHI TCATGA 1 cut(s) 2097
BspLI GGNNCC 6 cut(s) 357, 716, 918, 1561, 1596, 1691
BspMAI CTGCAG 1 cut(s) 343
BspQI GCTCTTC 1 cut(s) 2132
BspT107I GGYRCC 3 cut(s) 916, 1559, 1594
BspTNI GGTCTC 1 cut(s) 546
BsrFI RCCGGY 2 cut(s) 804, 2110
BsrI ACTGG 5 cut(s) 230, 486, 506, 1156, 2199
BssAI RCCGGY 2 cut(s) 804, 2110
BssECI CCNNGG 7 cut(s) 536, 786, 1059, 1197, 1651, 1685, 2031
BssMI GATC 4 cut(s) 736, 1401, 2064, 2100
BssNAI GTATAC 1 cut(s) 1965
BssSI CACGAG 2 cut(s) 831, 1013
BssT1I CCWWGG 7 cut(s) 536, 786, 1059, 1197, 1651, 1685, 2031
Bst1107I GTATAC 1 cut(s) 1965
Bst2BI CACGAG 2 cut(s) 831, 1013
Bst2UI CCWGG 4 cut(s) 162, 315, 395, 2120
Bst4CI ACNGT 2 cut(s) 941, 1969
Bst6I CTCTTC 4 cut(s) 27, 766, 1162, 2132
BstC8I GCNNGC 5 cut(s) 8, 194, 1110, 1646, 2200
BstDEI CTNAG 7 cut(s) 204, 237, 414, 475, 706, 890, 2005
BstDSI CCRYGG 4 cut(s) 786, 1651, 1685, 2031
BstF5I GGATG 9 cut(s) 150, 806, 924, 1033, 1088, 1160, 1349, 1397, 1912
BstFNI CGCG 2 cut(s) 470, 1133
BstH2I RGCGCY 1 cut(s) 2126
BstHHI GCGC 3 cut(s) 472, 1133, 2125
BstKTI GATC 4 cut(s) 739, 1404, 2067, 2103
BstMAI GTCTC 3 cut(s) 546, 768, 1583
BstMBI GATC 4 cut(s) 736, 1401, 2064, 2100
BstMCI CGRYCG 1 cut(s) 1104
BstMWI GCNNNNNNNGC 7 cut(s) 557, 751, 881, 959, 1008, 1858, 1982
BstNI CCWGG 4 cut(s) 162, 315, 395, 2120
BstNSI RCATGY 4 cut(s) 196, 949, 1498, 2202
BstSCI CCNGG 5 cut(s) 160, 313, 393, 1347, 2118
BstSFI CTRYAG 1 cut(s) 339
BstSLI GKGCMC 2 cut(s) 1564, 1597
BstUI CGCG 2 cut(s) 470, 1133
BstV1I GCAGC 1 cut(s) 2148
BstV2I GAAGAC 1 cut(s) 35
BstZ17I GTATAC 1 cut(s) 1965
BsuI GTATCC 1 cut(s) 1262
BsuRI GGCC 7 cut(s) 398, 482, 551, 1011, 1136, 1230, 1745
BtgI CCRYGG 4 cut(s) 786, 1651, 1685, 2031
BtsCI GGATG 9 cut(s) 150, 806, 924, 1033, 1088, 1160, 1349, 1397, 1912
BtsI GCAGTG 2 cut(s) 336, 884
BtsIMutI CAGTG 5 cut(s) 336, 884, 1149, 1884, 2192
Cac8I GCNNGC 5 cut(s) 8, 194, 1110, 1646, 2200
CaiI CAGNNNCTG 1 cut(s) 875
CciI TCATGA 1 cut(s) 2097
CfoI GCGC 3 cut(s) 472, 1133, 2125
Cfr10I RCCGGY 2 cut(s) 804, 2110
Cfr13I GGNCC 2 cut(s) 1228, 1744
CseI GACGC 1 cut(s) 87
CsiI ACCWGGT 1 cut(s) 313
Csp6I GTAC 5 cut(s) 223, 499, 949, 1308, 2116
CspAI ACCGGT 1 cut(s) 2110
CviQI GTAC 5 cut(s) 223, 499, 949, 1308, 2116
DdeI CTNAG 7 cut(s) 204, 237, 414, 475, 706, 890, 2005
DpnI GATC 4 cut(s) 738, 1403, 2066, 2102
DpnII GATC 4 cut(s) 736, 1401, 2064, 2100
EaeI YGGCCR 1 cut(s) 1009
Eam1104I CTCTTC 4 cut(s) 27, 766, 1162, 2132
EarI CTCTTC 4 cut(s) 27, 766, 1162, 2132
Eco130I CCWWGG 7 cut(s) 536, 786, 1059, 1197, 1651, 1685, 2031
Eco147I AGGCCT 1 cut(s) 551
Eco31I GGTCTC 1 cut(s) 546
Eco32I GATATC 1 cut(s) 1069
Eco57I CTGAAG 1 cut(s) 2037
EcoO109I RGGNCCY 1 cut(s) 1744
EcoRII CCWGG 4 cut(s) 160, 313, 393, 2118
EcoRV GATATC 1 cut(s) 1069
EcoT14I CCWWGG 7 cut(s) 536, 786, 1059, 1197, 1651, 1685, 2031
ErhI CCWWGG 7 cut(s) 536, 786, 1059, 1197, 1651, 1685, 2031
FalI AAGNNNNNCTT 6 cut(s) 166, 198, 905, 937, 2064, 2096
FaqI GGGAC 2 cut(s) 266, 1344
FbaI TGATCA 3 cut(s) 736, 2064, 2100
FblI GTMKAC 1 cut(s) 1964
Fnu4HI GCNGC 3 cut(s) 483, 1134, 2137
FokI GGATG 9 cut(s) 137, 813, 911, 1020, 1095, 1167, 1356, 1404, 1919
Fsp4HI GCNGC 3 cut(s) 483, 1134, 2137
FspBI CTAG 3 cut(s) 1433, 1694, 2218
GlaI GCGC 3 cut(s) 471, 1132, 2124
GluI GCNGC 3 cut(s) 483, 1134, 2137
GsaI CCCAGC 1 cut(s) 1116
GsuI CTGGAG 1 cut(s) 528
HaeII RGCGCY 1 cut(s) 2126
HaeIII GGCC 7 cut(s) 398, 482, 551, 1011, 1136, 1230, 1745
HapII CCGG 3 cut(s) 805, 1349, 2111
HgaI GACGC 1 cut(s) 87
HhaI GCGC 3 cut(s) 472, 1133, 2125
Hin6I GCGC 3 cut(s) 470, 1131, 2123
HinP1I GCGC 3 cut(s) 470, 1131, 2123
HincII GTYRAC 3 cut(s) 102, 322, 376
HindII GTYRAC 3 cut(s) 102, 322, 376
HindIII AAGCTT 1 cut(s) 2049
HinfI GANTC 8 cut(s) 505, 637, 647, 670, 965, 1268, 1378, 2042
HpaII CCGG 3 cut(s) 805, 1349, 2111
HphI GGTGA 2 cut(s) 1048, 1906
Hpy166II GTNNAC 8 cut(s) 102, 322, 376, 459, 1729, 1763, 1965, 2116
Hpy188III TCNNGA 6 cut(s) 545, 596, 613, 831, 1415, 2098
Hpy8I GTNNAC 8 cut(s) 102, 322, 376, 459, 1729, 1763, 1965, 2116
Hpy99I CGWCG 1 cut(s) 270
HpyAV CCTTC 5 cut(s) 20, 520, 931, 1615, 1840
HpyCH4III ACNGT 2 cut(s) 941, 1969
HpyCH4IV ACGT 2 cut(s) 255, 1814
HpyF10VI GCNNNNNNNGC 7 cut(s) 557, 751, 881, 959, 1008, 1858, 1982
HpyF3I CTNAG 7 cut(s) 204, 237, 414, 475, 706, 890, 2005
HpySE526I ACGT 2 cut(s) 255, 1814
HspAI GCGC 3 cut(s) 470, 1131, 2123
Ksp22I TGATCA 3 cut(s) 736, 2064, 2100
Kzo9I GATC 4 cut(s) 736, 1401, 2064, 2100
LguI GCTCTTC 1 cut(s) 2132
LmnI GCTCC 3 cut(s) 355, 872, 1653
Lsp1109I GCAGC 1 cut(s) 2148
LweI GCATC 4 cut(s) 678, 791, 1334, 2196
MabI ACCWGGT 1 cut(s) 313
MaeI CTAG 3 cut(s) 1433, 1694, 2218
MaeII ACGT 2 cut(s) 255, 1814
MaeIII GTNAC 6 cut(s) 142, 256, 309, 828, 941, 1909
MalI GATC 4 cut(s) 738, 1403, 2066, 2102
MboI GATC 4 cut(s) 736, 1401, 2064, 2100
MfeI CAATTG 2 cut(s) 747, 1853
MhlI GDGCHC 3 cut(s) 62, 1564, 1597
MlsI TGGCCA 1 cut(s) 1011
MluCI AATT 8 cut(s) 403, 419, 747, 756, 1737, 1809, 1853, 1940
MluNI TGGCCA 1 cut(s) 1011
MlyI GAGTC 2 cut(s) 499, 959
MmeI TCCRAC 4 cut(s) 434, 585, 637, 1242
Mox20I TGGCCA 1 cut(s) 1011
MscI TGGCCA 1 cut(s) 1011
MseI TTAA 2 cut(s) 1095, 1997
MslI CAYNNNNRTG 3 cut(s) 297, 570, 2197
Msp20I TGGCCA 1 cut(s) 1011
MspI CCGG 3 cut(s) 805, 1349, 2111
MspR9I CCNGG 5 cut(s) 162, 315, 395, 1349, 2120
MunI CAATTG 2 cut(s) 747, 1853
Mva1269I GAATGC 2 cut(s) 886, 1656
MvaI CCWGG 4 cut(s) 162, 315, 395, 2120
MvnI CGCG 2 cut(s) 470, 1133
MwoI GCNNNNNNNGC 7 cut(s) 557, 751, 881, 959, 1008, 1858, 1982
NciI CCSGG 1 cut(s) 1349
NcoI CCATGG 4 cut(s) 786, 1651, 1685, 2031
NdeII GATC 4 cut(s) 736, 1401, 2064, 2100
NlaIV GGNNCC 6 cut(s) 357, 716, 918, 1561, 1596, 1691
NmuCI GTSAC 3 cut(s) 828, 941, 1909
NspI RCATGY 4 cut(s) 196, 949, 1498, 2202
PaeI GCATGC 2 cut(s) 196, 2202
PagI TCATGA 1 cut(s) 2097
PceI AGGCCT 1 cut(s) 551
PciI ACATGT 1 cut(s) 945
PciSI GCTCTTC 1 cut(s) 2132
PcsI WCGNNNNNNNCGW 1 cut(s) 1833
PctI GAATGC 2 cut(s) 886, 1656
PfeI GAWTC 6 cut(s) 637, 647, 670, 1268, 1378, 2042
PflMI CCANNNNNTGG 2 cut(s) 501, 1261
PinAI ACCGGT 1 cut(s) 2110
PkrI GCNGC 3 cut(s) 484, 1135, 2138
PleI GAGTC 2 cut(s) 499, 959
PpsI GAGTC 2 cut(s) 499, 959
PscI ACATGT 1 cut(s) 945
PsiI TTATAA 2 cut(s) 233, 761
Psp6I CCWGG 4 cut(s) 160, 313, 393, 2118
PspFI CCCAGC 1 cut(s) 1112
PspGI CCWGG 4 cut(s) 160, 313, 393, 2118
PspN4I GGNNCC 6 cut(s) 357, 716, 918, 1561, 1596, 1691
PspPI GGNCC 2 cut(s) 1228, 1744
PstI CTGCAG 1 cut(s) 343
PstNI CAGNNNCTG 1 cut(s) 875
RsaI GTAC 5 cut(s) 224, 500, 950, 1309, 2117
RsaNI GTAC 5 cut(s) 223, 499, 949, 1308, 2116
RseI CAYNNNNRTG 3 cut(s) 297, 570, 2197
SapI GCTCTTC 1 cut(s) 2132
SaqAI TTAA 2 cut(s) 1095, 1997
SatI GCNGC 3 cut(s) 483, 1134, 2137
Sau3AI GATC 4 cut(s) 736, 1401, 2064, 2100
Sau96I GGNCC 2 cut(s) 1228, 1744
ScaI AGTACT 1 cut(s) 500
SchI GAGTC 2 cut(s) 499, 959
ScrFI CCNGG 5 cut(s) 162, 315, 395, 1349, 2120
SduI GDGCHC 3 cut(s) 62, 1564, 1597
SexAI ACCWGGT 1 cut(s) 313
SfaNI GCATC 4 cut(s) 678, 791, 1334, 2196
SfcI CTRYAG 1 cut(s) 339
SmiMI CAYNNNNRTG 3 cut(s) 297, 570, 2197
SphI GCATGC 2 cut(s) 196, 2202
Sse9I AATT 8 cut(s) 403, 419, 747, 756, 1737, 1809, 1853, 1940
SseBI AGGCCT 1 cut(s) 551
SsiI CCGC 5 cut(s) 447, 483, 1100, 1133, 2134
SspI AATATT 2 cut(s) 108, 529
SspMI CTAG 3 cut(s) 1433, 1694, 2218
StuI AGGCCT 1 cut(s) 551
StyD4I CCNGG 5 cut(s) 160, 313, 393, 1347, 2118
StyI CCWWGG 7 cut(s) 536, 786, 1059, 1197, 1651, 1685, 2031
TaaI ACNGT 2 cut(s) 941, 1969
TaiI ACGT 2 cut(s) 258, 1817
TaqI TCGA 5 cut(s) 268, 1104, 1165, 1400, 1836
TasI AATT 8 cut(s) 403, 419, 747, 756, 1737, 1809, 1853, 1940
TatI WGTACW 2 cut(s) 222, 498
TauI GCSGC 2 cut(s) 485, 1136
TfiI GAWTC 6 cut(s) 637, 647, 670, 1268, 1378, 2042
Tru1I TTAA 2 cut(s) 1095, 1997
Tru9I TTAA 2 cut(s) 1095, 1997
TscAI CASTG 5 cut(s) 343, 891, 1156, 1891, 2199
TseFI GTSAC 3 cut(s) 828, 941, 1909
TseI GCWGC 1 cut(s) 2136
Tsp45I GTSAC 3 cut(s) 828, 941, 1909
TspDTI ATGAA 3 cut(s) 647, 913, 1519
TspGWI ACGGA 1 cut(s) 36
TspRI CASTG 5 cut(s) 343, 891, 1156, 1891, 2199
Van91I CCANNNNNTGG 2 cut(s) 501, 1261
XapI RAATTY 1 cut(s) 1940
XceI RCATGY 4 cut(s) 196, 949, 1498, 2202
XmiI GTMKAC 1 cut(s) 1964
XspI CTAG 3 cut(s) 1433, 1694, 2218
ZrmI AGTACT 1 cut(s) 500
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.