Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000184.1

Orthogroup ID

OG0000273

Physical Location & Seq

Genomic Coordinates Reverse (-)

10288 .. 13162

Gene Structure 2875 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000184.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1773 bp

atgcaccccttcattctcaacttggactgtgacatgtacgcaaacaatgcagatgcaatacgagaggcactttgtttcttcttggatgaaaagactggccacgagactgcttatgtgcaacatccgcagttctacaacaatctcacaaagaatgatatttatggaaatgcatgcttcgtaactagtgaggtgagttatgtagtccatggttgtgagacttgtggatatggagcggccttgtattgtggcaccggatgtttccatcgaagagaatgtctctgtggaaagaagtattcaaagggttacacagaaaaatggaacattgatggccagaagagtactattgacaaaagtatccaagaatcggaggaatctacgaaacctcttattgattgtagctatgaaaagggcagtcaatggggaaaagaggtctctttctctgtctctctctcgcaatttcagaatattactcctaaaggtgatgatgaaatatttgttatggctatgcagatgggactgatatatggatgccctgtcgaagatatagttactggtttggcaatacaatgcaggggttggaaatcagtttattacaatccagaaaggccttcctttgttggtgttgctccaaacaccctagaaatcgcacttgttcaacaaaagaggtggtctgagggcatgtttcagatatttttctccgagtattgccctttcatatatggacatgggaagatacactttggtgcccaaatgggatattgcctctaccttctatgggctccagtttcattcccaactttgtattatgcacttgttcctcctctttgcttgctccatggcattcccttgttccccaaggtgtcaagcctatggttcctagcatttgcttatgtttttgtagcaaagaatgcatacagcatagttgaatttgtgatgtgtggcggtacactcaaagcatggtggaacctacaaagaatgtggcttatccgacgaatcacttcgtacttctttgccttcttcgacaccataaagaggcaattggggatatctgaaacacactttgccctcaccgataaggttgtcaccgaggatgtgataaagaggtacgagcaggaggttttggaatttggaagctcaagcattatgtacactgtaatggcaacatcggcattgctgaacttggtgagcctagtttggggaacaaagcgggttgtgatggatttagagttgaaggccttagaccagttcattagtcaagttattctttgtggcatattggttttgatcaacataccagtgtatgaagctctcttcttgcgcagtgataagggccatataccctcctctgtcatgtacaagtctcgtaagaaaactcctaaggctggcggcgtctgtgtacctgcagatcagccctgtccggtagcactcggacgtctttgctggcctctggcctcgccgacgtgccgcggtttgctgccggacgggattttgatgatatttgcccggggctttcacgggagagaggttttctgtttgtggttgcggtatgctggtttggtggagtttatgggcgtcgtctctgaatcacagtggatgttgatgcttcgtcgtgggtttccaggacaggcgtcaaaggtcgaggtggcgtggtaccatggcagcgtggtggtacgagtcgcggaggctgaggcagcatgggatgtggcggtacgagtcacggagcggtggcggcgaggtcgggcggcggtatcatctcctgatgtgagggcgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

590

Amino Acids

66.69

Weight (kDa)

7.94

Isoelectric Point (pI)

44.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55850
fragaria_vesca	FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica	MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica	Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis	pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis	RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata	RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora	Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii	Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa	Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha	Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana	Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1435
Acc16I	TGCGCA	1 cut(s)	1319
Acc36I	ACCTGC	1 cut(s)	1408
Acc65I	GGTACC	1 cut(s)	1650
AccB1I	GGYRCC	3 cut(s)	248, 743, 1650
AccBSI	CCGCTC	2 cut(s)	233, 1723
AccII	CGCG	2 cut(s)	1467, 1679
AcoI	YGGCCR	2 cut(s)	97, 328
AcsI	RAATTY	2 cut(s)	926, 1124
AcyI	GRCGYC	4 cut(s)	1389, 1432, 1572, 1628
AfiI	CCNNNNNNNGG	5 cut(s)	364, 775, 1032, 1195, 1382
AflIII	ACRYGT	1 cut(s)	33
AgsI	TTSAA	4 cut(s)	297, 656, 926, 1231
AhlI	ACTAGT	1 cut(s)	182
AjiI	CACGTC	1 cut(s)	1461
AjnI	CCWGG	1 cut(s)	1618
AleI	CACNNNNGTG	1 cut(s)	741
AluBI	AGCT	3 cut(s)	399, 1134, 1307
AluI	AGCT	3 cut(s)	399, 1134, 1307
Alw26I	GTCTC	7 cut(s)	98, 209, 281, 436, 448, 1365, 1582
Ama87I	CYCGRG	1 cut(s)	1503
AoxI	GGCC	8 cut(s)	97, 234, 328, 605, 1233, 1330, 1442, 1449
ApeKI	GCWGC	3 cut(s)	1474, 1659, 1691
ApoI	RAATTY	2 cut(s)	926, 1124
ArsI	GACNNNNNNTTYG	2 cut(s)	259, 291
Asp700I	GAANNNNTTC	1 cut(s)	997
Asp718I	GGTACC	1 cut(s)	1650
AspLEI	GCGC	1 cut(s)	1320
AspS9I	GGNCC	1 cut(s)	1330
AsuC2I	CCSGG	2 cut(s)	1504, 1505
AsuHPI	GGTGA	5 cut(s)	202, 491, 1060, 1075, 1195
AvaI	CYCGRG	1 cut(s)	1503
AxyI	CCTNAGG	1 cut(s)	1377
BaeGI	GKGCMC	1 cut(s)	748
BaeI	ACNNNNGTAYC	2 cut(s)	337, 370
BalI	TGGCCA	2 cut(s)	99, 330
BanI	GGYRCC	3 cut(s)	248, 743, 1650
BanII	GRGCYC	1 cut(s)	781
BauI	CACGAG	1 cut(s)	101
BbvCI	CCTCAGC	1 cut(s)	1686
BbvI	GCAGC	3 cut(s)	1461, 1671, 1703
BccI	CCATC	4 cut(s)	270, 320, 505, 1210
BciT130I	CCWGG	1 cut(s)	1620
BciVI	GTATCC	1 cut(s)	365
BclI	TGATCA	1 cut(s)	1284
BcnI	CCSGG	2 cut(s)	1504, 1505
BcoDI	GTCTC	7 cut(s)	98, 209, 281, 436, 448, 1365, 1582
BcuI	ACTAGT	1 cut(s)	182
BfaI	CTAG	4 cut(s)	183, 638, 878, 1190
BfmI	CTRYAG	1 cut(s)	1401
BfuAI	ACCTGC	1 cut(s)	1408
BfuI	GTATCC	1 cut(s)	365
BisI	GCNGC	8 cut(s)	234, 1387, 1465, 1475, 1660, 1692, 1730, 1743
BlsI	GCNGC	8 cut(s)	235, 1388, 1466, 1476, 1661, 1693, 1731, 1744
BmcAI	AGTACT	1 cut(s)	340
Bme1390I	CCNGG	3 cut(s)	1504, 1505, 1620
BmeT110I	CYCGRG	1 cut(s)	1503
BmgBI	CACGTC	1 cut(s)	1461
BmgT120I	GGNCC	1 cut(s)	1330
BmiI	GGNNCC	6 cut(s)	250, 745, 780, 875, 965, 1652
BmrFI	CCNGG	3 cut(s)	1504, 1505, 1620
BmsI	GCATC	3 cut(s)	43, 518, 1590
BoxI	GACNNNNGTC	1 cut(s)	1627
BplI	GAGNNNNNCTC	2 cut(s)	261, 293
BpmI	CTGGAG	1 cut(s)	765
Bpu10I	CCTNAGC	1 cut(s)	1686
BpuEI	CTTGAG	1 cut(s)	1120
BpuMI	CCSGG	2 cut(s)	1504, 1505
BsaHI	GRCGYC	4 cut(s)	1389, 1432, 1572, 1628
BsaI	GGTCTC	1 cut(s)	436
BsaJI	CCNNGG	8 cut(s)	205, 835, 855, 1086, 1465, 1503, 1504, 1654
BsaWI	WCCGGW	2 cut(s)	251, 1417
Bsc4I	CCNNNNNNNGG	5 cut(s)	364, 775, 1032, 1195, 1382
Bse1I	ACTGG	5 cut(s)	100, 556, 782, 1243, 1295
Bse21I	CCTNAGG	1 cut(s)	1377
Bse3DI	GCAATG	1 cut(s)	1169
BseBI	CCWGG	1 cut(s)	1620
BseDI	CCNNGG	8 cut(s)	205, 835, 855, 1086, 1465, 1503, 1504, 1654
BseGI	GGATG	7 cut(s)	91, 121, 260, 533, 1096, 1599, 1705
BseLI	CCNNNNNNNGG	5 cut(s)	364, 775, 1032, 1195, 1382
BseMI	GCAATG	1 cut(s)	1169
BseMII	CTCAG	2 cut(s)	663, 1677
BseNI	ACTGG	5 cut(s)	100, 556, 782, 1243, 1295
BseRI	GAGGAG	2 cut(s)	810, 1333
BseSI	GKGCMC	1 cut(s)	748
BseXI	GCAGC	3 cut(s)	1461, 1671, 1703
Bsh1236I	CGCG	2 cut(s)	1467, 1679
BshFI	GGCC	8 cut(s)	99, 236, 330, 607, 1235, 1332, 1444, 1451
BshNI	GGYRCC	3 cut(s)	248, 743, 1650
BsiHKCI	CYCGRG	1 cut(s)	1503
BsiSI	CCGG	4 cut(s)	252, 1418, 1478, 1504
BslFI	GGGAC	1 cut(s)	528
BslI	CCNNNNNNNGG	5 cut(s)	364, 775, 1032, 1195, 1382
BsmAI	GTCTC	7 cut(s)	98, 209, 281, 436, 448, 1365, 1582
BsmBI	CGTCTC	1 cut(s)	1582
BsmFI	GGGAC	1 cut(s)	528
BsmI	GAATGC	2 cut(s)	840, 913
BsnI	GGCC	8 cut(s)	99, 236, 330, 607, 1235, 1332, 1444, 1451
Bso31I	GGTCTC	1 cut(s)	436
BsoBI	CYCGRG	1 cut(s)	1503
Bsp1286I	GDGCHC	2 cut(s)	748, 781
Bsp1407I	TGTACA	2 cut(s)	1146, 1353
Bsp143I	GATC	2 cut(s)	1284, 1405
Bsp19I	CCATGG	3 cut(s)	205, 835, 1654
BspANI	GGCC	8 cut(s)	99, 236, 330, 607, 1235, 1332, 1444, 1451
BspCNI	CTCAG	2 cut(s)	664, 1678
BspFNI	CGCG	2 cut(s)	1467, 1679
BspLI	GGNNCC	6 cut(s)	250, 745, 780, 875, 965, 1652
BspMAI	CTGCAG	1 cut(s)	1405
BspMI	ACCTGC	1 cut(s)	1408
BspT107I	GGYRCC	3 cut(s)	248, 743, 1650
BspTNI	GGTCTC	1 cut(s)	436
BsrBI	CCGCTC	2 cut(s)	233, 1723
BsrDI	GCAATG	1 cut(s)	1169
BsrGI	TGTACA	2 cut(s)	1146, 1353
BsrI	ACTGG	5 cut(s)	100, 556, 782, 1243, 1295
BssECI	CCNNGG	8 cut(s)	205, 835, 855, 1086, 1465, 1503, 1504, 1654
BssMI	GATC	2 cut(s)	1284, 1405
BssNI	GRCGYC	4 cut(s)	1389, 1432, 1572, 1628
BssSI	CACGAG	1 cut(s)	101
BssT1I	CCWWGG	4 cut(s)	205, 835, 855, 1654
Bst2BI	CACGAG	1 cut(s)	101
Bst2UI	CCWGG	1 cut(s)	1620
Bst4CI	ACNGT	3 cut(s)	29, 1153, 1590
Bst6I	CTCTTC	3 cut(s)	262, 329, 1316
BstACI	GRCGYC	4 cut(s)	1389, 1432, 1572, 1628
BstAPI	GCANNNNNTGC	2 cut(s)	47, 908
BstAUI	TGTACA	2 cut(s)	1146, 1353
BstC8I	GCNNGC	4 cut(s)	172, 830, 1384, 1442
BstDEI	CTNAG	4 cut(s)	672, 1237, 1377, 1686
BstDSI	CCRYGG	4 cut(s)	205, 835, 1465, 1654
BstF5I	GGATG	7 cut(s)	91, 121, 260, 533, 1096, 1599, 1705
BstFNI	CGCG	2 cut(s)	1467, 1679
BstHHI	GCGC	1 cut(s)	1320
BstKTI	GATC	2 cut(s)	1287, 1408
BstMAI	GTCTC	7 cut(s)	98, 209, 281, 436, 448, 1365, 1582
BstMBI	GATC	2 cut(s)	1284, 1405
BstMWI	GCNNNNNNNGC	6 cut(s)	47, 124, 908, 1166, 1691, 1729
BstNI	CCWGG	1 cut(s)	1620
BstNSI	RCATGY	3 cut(s)	37, 174, 682
BstPAI	GACNNNNGTC	1 cut(s)	1627
BstSCI	CCNGG	3 cut(s)	1502, 1503, 1618
BstSFI	CTRYAG	1 cut(s)	1401
BstSLI	GKGCMC	1 cut(s)	748
BstUI	CGCG	2 cut(s)	1467, 1679
BstV1I	GCAGC	3 cut(s)	1461, 1671, 1703
Bsu36I	CCTNAGG	1 cut(s)	1377
BsuI	GTATCC	1 cut(s)	365
BsuRI	GGCC	8 cut(s)	99, 236, 330, 607, 1235, 1332, 1444, 1451
BtgI	CCRYGG	4 cut(s)	205, 835, 1465, 1654
BtrI	CACGTC	1 cut(s)	1461
BtsCI	GGATG	7 cut(s)	91, 121, 260, 533, 1096, 1599, 1705
BtsI	GCAGTG	1 cut(s)	1327
BtsIMutI	CAGTG	4 cut(s)	1149, 1302, 1327, 1595
BveI	ACCTGC	1 cut(s)	1408
Cac8I	GCNNGC	4 cut(s)	172, 830, 1384, 1442
CfoI	GCGC	1 cut(s)	1320
Cfr13I	GGNCC	1 cut(s)	1330
Cfr42I	CCGCGG	1 cut(s)	1468
Cfr9I	CCCGGG	1 cut(s)	1503
CseI	GACGC	3 cut(s)	1378, 1561, 1617
CspCI	CAANNNNNGTGG	4 cut(s)	647, 682, 959, 994
DdeI	CTNAG	4 cut(s)	672, 1237, 1377, 1686
DpnI	GATC	2 cut(s)	1286, 1407
DpnII	GATC	2 cut(s)	1284, 1405
EaeI	YGGCCR	2 cut(s)	97, 328
Eam1104I	CTCTTC	3 cut(s)	262, 329, 1316
EarI	CTCTTC	3 cut(s)	262, 329, 1316
Eco130I	CCWWGG	4 cut(s)	205, 835, 855, 1654
Eco147I	AGGCCT	2 cut(s)	607, 1235
Eco24I	GRGCYC	1 cut(s)	781
Eco31I	GGTCTC	1 cut(s)	436
Eco32I	GATATC	1 cut(s)	1047
Eco81I	CCTNAGG	1 cut(s)	1377
Eco88I	CYCGRG	1 cut(s)	1503
EcoRII	CCWGG	1 cut(s)	1618
EcoRV	GATATC	1 cut(s)	1047
EcoT14I	CCWWGG	4 cut(s)	205, 835, 855, 1654
EcoT22I	ATGCAT	2 cut(s)	172, 913
EcoT38I	GRGCYC	1 cut(s)	781
ErhI	CCWWGG	4 cut(s)	205, 835, 855, 1654
Esp3I	CGTCTC	1 cut(s)	1582
FalI	AAGNNNNNCTT	4 cut(s)	722, 754, 1248, 1280
FaqI	GGGAC	1 cut(s)	528
FauI	CCCGC	1 cut(s)	1200
FbaI	TGATCA	1 cut(s)	1284
Fnu4HI	GCNGC	8 cut(s)	234, 1387, 1465, 1475, 1660, 1692, 1730, 1743
FokI	GGATG	7 cut(s)	98, 108, 267, 540, 1103, 1606, 1712
FriOI	GRGCYC	1 cut(s)	781
Fsp4HI	GCNGC	8 cut(s)	234, 1387, 1465, 1475, 1660, 1692, 1730, 1743
FspBI	CTAG	4 cut(s)	183, 638, 878, 1190
FspI	TGCGCA	1 cut(s)	1319
GlaI	GCGC	1 cut(s)	1319
GluI	GCNGC	8 cut(s)	234, 1387, 1465, 1475, 1660, 1692, 1730, 1743
GsuI	CTGGAG	1 cut(s)	765
HaeIII	GGCC	8 cut(s)	99, 236, 330, 607, 1235, 1332, 1444, 1451
HapII	CCGG	4 cut(s)	252, 1418, 1478, 1504
HgaI	GACGC	3 cut(s)	1378, 1561, 1617
HhaI	GCGC	1 cut(s)	1320
Hin1I	GRCGYC	4 cut(s)	1389, 1432, 1572, 1628
Hin6I	GCGC	1 cut(s)	1318
HinP1I	GCGC	1 cut(s)	1318
HinfI	GANTC	6 cut(s)	362, 371, 993, 1583, 1674, 1713
HpaII	CCGG	4 cut(s)	252, 1418, 1478, 1504
HphI	GGTGA	5 cut(s)	202, 491, 1060, 1075, 1195
Hpy166II	GTNNAC	3 cut(s)	947, 1149, 1397
Hpy188I	TCNGA	9 cut(s)	367, 462, 673, 687, 700, 989, 1051, 1430, 1582
Hpy188III	TCNNGA	2 cut(s)	599, 1757
Hpy8I	GTNNAC	3 cut(s)	947, 1149, 1397
Hpy99I	CGWCG	4 cut(s)	993, 1462, 1577, 1611
HpyAV	CCTTC	5 cut(s)	19, 618, 779, 1024, 1225
HpyCH4III	ACNGT	3 cut(s)	29, 1153, 1590
HpyCH4IV	ACGT	2 cut(s)	1432, 1460
HpyF10VI	GCNNNNNNNGC	6 cut(s)	47, 124, 908, 1166, 1691, 1729
HpyF3I	CTNAG	4 cut(s)	672, 1237, 1377, 1686
HpySE526I	ACGT	2 cut(s)	1432, 1460
Hsp92I	GRCGYC	4 cut(s)	1389, 1432, 1572, 1628
HspAI	GCGC	1 cut(s)	1318
KpnI	GGTACC	1 cut(s)	1654
Ksp22I	TGATCA	1 cut(s)	1284
KspI	CCGCGG	1 cut(s)	1468
Kzo9I	GATC	2 cut(s)	1284, 1405
LmnI	GCTCC	5 cut(s)	230, 631, 784, 837, 1720
Lsp1109I	GCAGC	3 cut(s)	1461, 1671, 1703
LweI	GCATC	3 cut(s)	43, 518, 1590
MaeI	CTAG	4 cut(s)	183, 638, 878, 1190
MaeII	ACGT	2 cut(s)	1432, 1460
MaeIII	GTNAC	6 cut(s)	29, 178, 302, 547, 1081, 1714
MalI	GATC	2 cut(s)	1286, 1407
MbiI	CCGCTC	2 cut(s)	233, 1723
MboI	GATC	2 cut(s)	1284, 1405
MboII	GAAGA	7 cut(s)	70, 279, 346, 551, 742, 1009, 1303
MfeI	CAATTG	1 cut(s)	1037
MhlI	GDGCHC	2 cut(s)	748, 781
MlsI	TGGCCA	2 cut(s)	99, 330
MluCI	AATT	4 cut(s)	455, 926, 1037, 1124
MluNI	TGGCCA	2 cut(s)	99, 330
MlyI	GAGTC	2 cut(s)	1683, 1722
MmeI	TCCRAC	2 cut(s)	557, 1012
Mox20I	TGGCCA	2 cut(s)	99, 330
Mph1103I	ATGCAT	2 cut(s)	172, 913
MroXI	GAANNNNTTC	1 cut(s)	997
MscI	TGGCCA	2 cut(s)	99, 330
MslI	CAYNNNNRTG	4 cut(s)	210, 741, 1154, 1295
Msp20I	TGGCCA	2 cut(s)	99, 330
MspA1I	CMGCKG	1 cut(s)	1467
MspI	CCGG	4 cut(s)	252, 1418, 1478, 1504
MspR9I	CCNGG	3 cut(s)	1504, 1505, 1620
MunI	CAATTG	1 cut(s)	1037
Mva1269I	GAATGC	2 cut(s)	840, 913
MvaI	CCWGG	1 cut(s)	1620
MvnI	CGCG	2 cut(s)	1467, 1679
MwoI	GCNNNNNNNGC	6 cut(s)	47, 124, 908, 1166, 1691, 1729
NciI	CCSGG	2 cut(s)	1504, 1505
NcoI	CCATGG	3 cut(s)	205, 835, 1654
NdeII	GATC	2 cut(s)	1284, 1405
NlaIV	GGNNCC	6 cut(s)	250, 745, 780, 875, 965, 1652
NmuCI	GTSAC	3 cut(s)	29, 1081, 1714
NsbI	TGCGCA	1 cut(s)	1319
NsiI	ATGCAT	2 cut(s)	172, 913
NspI	RCATGY	3 cut(s)	37, 174, 682
OliI	CACNNNNGTG	1 cut(s)	741
PaeI	GCATGC	1 cut(s)	174
PceI	AGGCCT	2 cut(s)	607, 1235
PciI	ACATGT	1 cut(s)	33
PctI	GAATGC	2 cut(s)	840, 913
PdmI	GAANNNNTTC	1 cut(s)	997
PfeI	GAWTC	4 cut(s)	362, 371, 993, 1583
PfoI	TCCNGGA	1 cut(s)	1618
PkrI	GCNGC	8 cut(s)	235, 1388, 1466, 1476, 1661, 1693, 1731, 1744
PleI	GAGTC	2 cut(s)	1682, 1721
PpsI	GAGTC	2 cut(s)	1682, 1721
PscI	ACATGT	1 cut(s)	33
PshAI	GACNNNNGTC	1 cut(s)	1627
Psp6I	CCWGG	1 cut(s)	1618
PspGI	CCWGG	1 cut(s)	1618
PspN4I	GGNNCC	6 cut(s)	250, 745, 780, 875, 965, 1652
PspPI	GGNCC	1 cut(s)	1330
PstI	CTGCAG	1 cut(s)	1405
RseI	CAYNNNNRTG	4 cut(s)	210, 741, 1154, 1295
SacII	CCGCGG	1 cut(s)	1468
SatI	GCNGC	8 cut(s)	234, 1387, 1465, 1475, 1660, 1692, 1730, 1743
Sau3AI	GATC	2 cut(s)	1284, 1405
Sau96I	GGNCC	1 cut(s)	1330
ScaI	AGTACT	1 cut(s)	340
SchI	GAGTC	2 cut(s)	1683, 1722
ScrFI	CCNGG	3 cut(s)	1504, 1505, 1620
SduI	GDGCHC	2 cut(s)	748, 781
SfaNI	GCATC	3 cut(s)	43, 518, 1590
SfcI	CTRYAG	1 cut(s)	1401
Sfr303I	CCGCGG	1 cut(s)	1468
SgrBI	CCGCGG	1 cut(s)	1468
SmaI	CCCGGG	1 cut(s)	1505
SmiMI	CAYNNNNRTG	4 cut(s)	210, 741, 1154, 1295
SmlI	CTYRAG	1 cut(s)	1135
SmoI	CTYRAG	1 cut(s)	1135
SpeI	ACTAGT	1 cut(s)	182
SphI	GCATGC	1 cut(s)	174
Sse9I	AATT	4 cut(s)	455, 926, 1037, 1124
SseBI	AGGCCT	2 cut(s)	607, 1235
SspI	AATATT	2 cut(s)	466, 492
SspMI	CTAG	4 cut(s)	183, 638, 878, 1190
StuI	AGGCCT	2 cut(s)	607, 1235
StyD4I	CCNGG	3 cut(s)	1502, 1503, 1618
StyI	CCWWGG	4 cut(s)	205, 835, 855, 1654
TaaI	ACNGT	3 cut(s)	29, 1153, 1590
TaiI	ACGT	2 cut(s)	1435, 1463
TaqI	TCGA	4 cut(s)	265, 537, 1020, 1638
TasI	AATT	4 cut(s)	455, 926, 1037, 1124
TatI	WGTACW	3 cut(s)	338, 1146, 1353
TauI	GCSGC	5 cut(s)	236, 1389, 1467, 1732, 1745
TfiI	GAWTC	4 cut(s)	362, 371, 993, 1583
TscAI	CASTG	4 cut(s)	1156, 1302, 1327, 1595
TseFI	GTSAC	3 cut(s)	29, 1081, 1714
TseI	GCWGC	3 cut(s)	1474, 1659, 1691
Tsp45I	GTSAC	3 cut(s)	29, 1081, 1714
TspDTI	ATGAA	7 cut(s)	102, 417, 501, 703, 777, 1237, 1317
TspGWI	ACGGA	1 cut(s)	1733
TspMI	CCCGGG	1 cut(s)	1503
TspRI	CASTG	4 cut(s)	1156, 1302, 1327, 1595
XapI	RAATTY	2 cut(s)	926, 1124
XceI	RCATGY	3 cut(s)	37, 174, 682
XmaI	CCCGGG	1 cut(s)	1503
XmnI	GAANNNNTTC	1 cut(s)	997
XspI	CTAG	4 cut(s)	183, 638, 878, 1190
ZraI	GACGTC	1 cut(s)	1433
ZrmI	AGTACT	1 cut(s)	340
Zsp2I	ATGCAT	2 cut(s)	172, 913

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.