Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000273

Physical Location & Seq

Genomic Coordinates Forward (+)

7171156 .. 7177973

Gene Structure 6818 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00005280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGCATGAGTTACAAAGTGGAGGACCTGGTCCCGGGTCCTTCCCTATCATTAAACCATTTCAAATAGAGAAAGCTCGAGCAATTAGAGTTGGCTCAAAAATGGGAGAGGAAAGACATTTACCACTGTTTGAGACAACGATGGCAAAGGGAAGAGTCCTCTATAGGTTTTCTGCGGTGTCTGTTTCTGTTGGCATATGTTTGATTTGGGTTTATAGAGTGACTCATATACCAAAAGCTGGAGAAGATGGAAGATTTGGTTGGATGCTGTTGTTCGCCGCTGAGTTATGGTTTGCTTTTTACTGGTTCGTCACTCAAGCCCTTCGGTGGAGCCGCATCAACCGGCATACCTTCAAGGACAGGCTCTCTGAAAGATATGAGAATGAGTTGCCGGGGGTGGACATATTCGTGTGCACCGCGGATCCGATCATAGAGCCACCGATTATGGTGATGAACACTGTTCTATCGGTCATGGCTTATGACTATCCGCCGGAGAAGCTCAGCGTGTATCTCTCCGACGATGGCGGCTCAGAATTTACGTACTGTGCTTTTTTAGAAGCTGCTGAGTTTGCCAAGCGCTGGATACCCTATTGCAAGAAGTACAACGTGGAGCCAAGATCACCCGCTGCTTATTTTGTCTCAACAGCTTCTGATGATCAAAGTCAGAATCAGAAACAAGAAGGAGATTTAGCTGTAATTAAGAAATTATATGAGGACATGGCGACCAAAATTGGAAATGCAGTGAAGCTAGGCCGCATTTCAGAAGAAGAGAGATCAAAACATAAAGGCTTTTCTCGATGGGACTCATATTCATCAAAACGTGACCATGAAACCATTTTTCAAATAGTAATTGATGGGAGAGACCCAAATGCAAGAGATGTTGAAGGGTGTGTGTTGCCAACTTTGGTTTATTTGGCTCGGGAGAAGAGACCCCAGATTCACCATAACTTCAAAGCTGGTGCTATGAATGCTCTGGCCATAAGGGATGCACTCTGCTTCTTAATGGATGAAGGAAAAGGCCATGAGATTGCGTATGTACAGTTCCCACAGAATTTCGATAACCTTACTAAGAATGAATTATACGCTTCATTACGAGTAATTGCCGAGGTGGAAGCCCATGGTCTGGATAATTCTTGGGGGACATTATATATTGGGAGTGGATGCTTTCACAGAAGAGAAACTCTTTGTGGGAAGAAATTCAGCAAGATGGGTGTGAAATATGGGTGTCCGGTTGAAGATGTGTTAACAGGACTATTAATCCAATGCCGAGGATGGAAATCAGTGTATTGCAATCCAACAAGGAAAGCTTTCTTAGGATTAAATGCAACCACACTGCTTCAGGTACTTGTGCAGCATAAGAGATGGTCGGAAGGCAACCTTCAAATTACGCTGTCTAAGTACAGTGTTGTATGGTATGGCCATGGAAAGATTAGTTTAGGCCATCAACTTGGATACCTTCGCTACAACTTGTGGGCTGCTAATTGCTGGGCAACACTAATTTACTCAACTCTTCCTTCACTTTACCTCCTTAGAGGCACGTCCTTATTTCCTCAGATTTCAAGTCGATGGATTATACCATTTGCATTTGTTTTAATTGCTAAGAACATTGGAAGCTTTGTGGAGTATCTATGGTGTGGAGGCACGAGCTTAGGAATGTACTCGAGTAAGAATTCTGTGGTGACCGGGAGTGAAGCTGTAGATGAGATATGCAAGTTACCCTCGAAAGGGTGGCTATTGAATTTTAAGAACAAGGCATTGTTAGAGAGGAAAAGGGAGCTGCTTGTCATAGAGGAAAAACGAGCACTCCATGCAGTGAAGGCTTTCCCCAAAGATGACCCATCTAAGCCACGGAAGCTTACTGCTTCCCATATATGGAACTATTGTTACATTTATACAAGTCCAAATGTTGTTCATCGTAGTTTTATAGCTTTCTTTCGATGCTATTGCATCGCTTCATGTACTCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

654

Amino Acids

74.45

Weight (kDa)

9.05

Isoelectric Point (pI)

45.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	132 - 324	4.5e-51	Cellulose synthase
Cellulose_synt	PF03552	322 - 397	1.4e-16	Cellulose synthase
Cellulose_synt	PF03552	401 - 545	4.5e-22	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55850
fragaria_vesca	FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica	MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica	Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis	pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis	RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata	RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora	Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii	Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa	Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha	Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana	Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	3 cut(s)	236, 576, 1120
AccII	CGCG	1 cut(s)	416
AciI	CCGC	9 cut(s)	173, 276, 331, 414, 416, 485, 522, 621, 751
AclWI	GGATC	2 cut(s)	413, 426
AcoI	YGGCCR	2 cut(s)	972, 1414
AcsI	RAATTY	5 cut(s)	530, 1048, 1193, 1666, 1735
AcuI	CTGAAG	1 cut(s)	1319
AfaI	GTAC	7 cut(s)	539, 599, 1035, 1341, 1397, 1655, 1957
AfeI	AGCGCT	1 cut(s)	575
AfiI	CCNNNNNNNGG	8 cut(s)	32, 236, 324, 576, 1120, 1721, 1722, 1869
AgsI	TTSAA	9 cut(s)	62, 352, 839, 881, 949, 1232, 1379, 1557, 1735
AjiI	CACGTC	1 cut(s)	1536
AjnI	CCWGG	1 cut(s)	25
AjuI	GAANNNNNNNTTGG	2 cut(s)	241, 273
Alw21I	GWGCWC	2 cut(s)	413, 1801
Alw26I	GTCTC	4 cut(s)	125, 640, 852, 919
Alw44I	GTGCAC	1 cut(s)	409
AlwI	GGATC	2 cut(s)	413, 426
AlwNI	CAGNNNCTG	1 cut(s)	647
Ama87I	CYCGRG	4 cut(s)	32, 75, 915, 1657
Aor51HI	AGCGCT	1 cut(s)	575
AoxI	GGCC	5 cut(s)	748, 972, 1015, 1414, 1435
ApaLI	GTGCAC	1 cut(s)	409
ApeKI	GCWGC	5 cut(s)	557, 623, 1348, 1472, 1774
ApoI	RAATTY	5 cut(s)	530, 1048, 1193, 1666, 1735
AseI	ATTAAT	1 cut(s)	1253
Asp700I	GAANNNNTTC	3 cut(s)	1193, 1304, 1817
AspLEI	GCGC	1 cut(s)	576
AspS9I	GGNCC	3 cut(s)	23, 29, 36
AsuC2I	CCSGG	4 cut(s)	33, 34, 390, 1681
AsuHPI	GGTGA	4 cut(s)	457, 609, 929, 1687
AvaI	CYCGRG	4 cut(s)	32, 75, 915, 1657
AvaII	GGWCC	3 cut(s)	23, 29, 36
BaeGI	GKGCMC	1 cut(s)	413
BalI	TGGCCA	2 cut(s)	974, 1416
BamHI	GGATCC	1 cut(s)	418
BauI	CACGAG	1 cut(s)	1639
Bbv12I	GWGCWC	2 cut(s)	413, 1801
BbvI	GCAGC	5 cut(s)	544, 610, 1360, 1459, 1761
BcgI	CGANNNNNNTGC	2 cut(s)	1923, 1957
BciT130I	CCWGG	1 cut(s)	27
BciVI	GTATCC	2 cut(s)	573, 1442
BclI	TGATCA	1 cut(s)	652
BcnI	CCSGG	4 cut(s)	33, 34, 390, 1681
BcoDI	GTCTC	4 cut(s)	125, 640, 852, 919
BfaI	CTAG	1 cut(s)	746
BfmI	CTRYAG	2 cut(s)	160, 1692
BfoI	RGCGCY	1 cut(s)	577
BfuI	GTATCC	2 cut(s)	573, 1442
BisI	GCNGC	9 cut(s)	276, 331, 523, 558, 624, 751, 1349, 1473, 1775
BlpI	GCTNAGC	1 cut(s)	497
BlsI	GCNGC	9 cut(s)	277, 332, 524, 559, 625, 752, 1350, 1474, 1776
Bme1390I	CCNGG	5 cut(s)	27, 33, 34, 390, 1681
Bme18I	GGWCC	3 cut(s)	23, 29, 36
BmeT110I	CYCGRG	4 cut(s)	32, 75, 915, 1657
BmgBI	CACGTC	1 cut(s)	1536
BmgT120I	GGNCC	3 cut(s)	23, 29, 36
BmiI	GGNNCC	5 cut(s)	31, 37, 329, 420, 609
BmrFI	CCNGG	5 cut(s)	27, 33, 34, 390, 1681
BmsI	GCATC	6 cut(s)	252, 342, 973, 1148, 1925, 1953
BpmI	CTGGAG	1 cut(s)	258
Bpu10I	CCTNAGC	1 cut(s)	1645
Bpu1102I	GCTNAGC	1 cut(s)	497
BpuEI	CTTGAG	1 cut(s)	297
BpuMI	CCSGG	4 cut(s)	33, 34, 390, 1681
BsaAI	YACGTR	1 cut(s)	537
BsaBI	GATNNNNATC	1 cut(s)	1273
BsaI	GGTCTC	2 cut(s)	852, 919
BsaJI	CCNNGG	8 cut(s)	32, 389, 414, 1101, 1114, 1264, 1417, 1844
BsaWI	WCCGGW	1 cut(s)	1225
BsaXI	ACNNNNNCTCC	4 cut(s)	1506, 1536, 1785, 1815
Bsc4I	CCNNNNNNNGG	8 cut(s)	32, 236, 324, 576, 1120, 1721, 1722, 1869
Bse118I	RCCGGY	1 cut(s)	339
Bse1I	ACTGG	1 cut(s)	305
Bse8I	GATNNNNATC	1 cut(s)	1273
BseBI	CCWGG	1 cut(s)	27
BseDI	CCNNGG	8 cut(s)	32, 389, 414, 1101, 1114, 1264, 1417, 1844
BseGI	GGATG	5 cut(s)	267, 988, 1009, 1163, 1274
BseJI	GATNNNNATC	1 cut(s)	1273
BseLI	CCNNNNNNNGG	8 cut(s)	32, 236, 324, 576, 1120, 1721, 1722, 1869
BseMII	CTCAG	5 cut(s)	270, 511, 540, 552, 1562
BseNI	ACTGG	1 cut(s)	305
BseSI	GKGCMC	1 cut(s)	413
BseXI	GCAGC	5 cut(s)	544, 610, 1360, 1459, 1761
BseYI	CCCAGC	1 cut(s)	1482
BsgI	GTGCAG	1 cut(s)	1367
Bsh1236I	CGCG	1 cut(s)	416
BshFI	GGCC	5 cut(s)	750, 974, 1017, 1416, 1437
BsiHKAI	GWGCWC	2 cut(s)	413, 1801
BsiHKCI	CYCGRG	4 cut(s)	32, 75, 915, 1657
BsiSI	CCGG	6 cut(s)	33, 340, 389, 488, 1226, 1680
BslFI	GGGAC	3 cut(s)	15, 812, 1150
BslI	CCNNNNNNNGG	8 cut(s)	32, 236, 324, 576, 1120, 1721, 1722, 1869
BsmAI	GTCTC	4 cut(s)	125, 640, 852, 919
BsmFI	GGGAC	3 cut(s)	15, 812, 1150
BsmI	GAATGC	1 cut(s)	970
BsnI	GGCC	5 cut(s)	750, 974, 1017, 1416, 1437
Bso31I	GGTCTC	2 cut(s)	852, 919
BsoBI	CYCGRG	4 cut(s)	32, 75, 915, 1657
Bsp1286I	GDGCHC	2 cut(s)	413, 1801
Bsp1407I	TGTACA	1 cut(s)	1033
Bsp143I	GATC	5 cut(s)	418, 423, 614, 652, 770
Bsp1720I	GCTNAGC	1 cut(s)	497
Bsp19I	CCATGG	2 cut(s)	1114, 1417
BspACI	CCGC	9 cut(s)	173, 276, 331, 414, 416, 485, 522, 621, 751
BspANI	GGCC	5 cut(s)	750, 974, 1017, 1416, 1437
BspCNI	CTCAG	5 cut(s)	271, 510, 539, 553, 1561
BspFNI	CGCG	1 cut(s)	416
BspLI	GGNNCC	5 cut(s)	31, 37, 329, 420, 609
BspPI	GGATC	2 cut(s)	413, 426
BspTNI	GGTCTC	2 cut(s)	852, 919
BsrFI	RCCGGY	1 cut(s)	339
BsrGI	TGTACA	1 cut(s)	1033
BsrI	ACTGG	1 cut(s)	305
BssAI	RCCGGY	1 cut(s)	339
BssECI	CCNNGG	8 cut(s)	32, 389, 414, 1101, 1114, 1264, 1417, 1844
BssMI	GATC	5 cut(s)	418, 423, 614, 652, 770
BssSI	CACGAG	1 cut(s)	1639
BssT1I	CCWWGG	2 cut(s)	1114, 1417
Bst2BI	CACGAG	1 cut(s)	1639
Bst2UI	CCWGG	1 cut(s)	27
Bst4CI	ACNGT	5 cut(s)	126, 457, 542, 1038, 1400
Bst6I	CTCTTC	5 cut(s)	145, 759, 917, 1165, 1512
BstAPI	GCANNNNNTGC	1 cut(s)	1805
BstAUI	TGTACA	1 cut(s)	1033
BstBAI	YACGTR	1 cut(s)	537
BstDSI	CCRYGG	4 cut(s)	414, 1114, 1417, 1844
BstEII	GGTNACC	1 cut(s)	1675
BstF5I	GGATG	5 cut(s)	267, 988, 1009, 1163, 1274
BstFNI	CGCG	1 cut(s)	416
BstH2I	RGCGCY	1 cut(s)	577
BstHHI	GCGC	1 cut(s)	576
BstKTI	GATC	5 cut(s)	421, 426, 617, 655, 773
BstMAI	GTCTC	4 cut(s)	125, 640, 852, 919
BstMBI	GATC	5 cut(s)	418, 423, 614, 652, 770
BstMWI	GCNNNNNNNGC	6 cut(s)	493, 566, 965, 1805, 1814, 1849
BstNI	CCWGG	1 cut(s)	27
BstPI	GGTNACC	1 cut(s)	1675
BstSCI	CCNGG	5 cut(s)	25, 31, 32, 388, 1679
BstSFI	CTRYAG	2 cut(s)	160, 1692
BstSLI	GKGCMC	1 cut(s)	413
BstSNI	TACGTA	1 cut(s)	537
BstUI	CGCG	1 cut(s)	416
BstV1I	GCAGC	5 cut(s)	544, 610, 1360, 1459, 1761
BstX2I	RGATCY	1 cut(s)	418
BstXI	CCANNNNNNTGG	1 cut(s)	1445
BstYI	RGATCY	1 cut(s)	418
BsuI	GTATCC	2 cut(s)	573, 1442
BsuRI	GGCC	5 cut(s)	750, 974, 1017, 1416, 1437
BtgI	CCRYGG	4 cut(s)	414, 1114, 1417, 1844
BtgZI	GCGATG	1 cut(s)	1930
BtrI	CACGTC	1 cut(s)	1536
BtsCI	GGATG	5 cut(s)	267, 988, 1009, 1163, 1274
BtsI	GCAGTG	3 cut(s)	744, 1328, 1815
BtsIMutI	CAGTG	7 cut(s)	122, 453, 744, 1284, 1328, 1405, 1815
CaiI	CAGNNNCTG	1 cut(s)	647
CfoI	GCGC	1 cut(s)	576
Cfr10I	RCCGGY	1 cut(s)	339
Cfr13I	GGNCC	3 cut(s)	23, 29, 36
Cfr42I	CCGCGG	1 cut(s)	417
Cfr9I	CCCGGG	1 cut(s)	32
CsiI	ACCWGGT	1 cut(s)	25
Csp6I	GTAC	7 cut(s)	538, 598, 1034, 1340, 1396, 1654, 1956
CviAII	CATG	9 cut(s)	5, 469, 715, 824, 1019, 1115, 1418, 1805, 1953
CviQI	GTAC	7 cut(s)	538, 598, 1034, 1340, 1396, 1654, 1956
DpnI	GATC	5 cut(s)	420, 425, 616, 654, 772
DpnII	GATC	5 cut(s)	418, 423, 614, 652, 770
EaeI	YGGCCR	2 cut(s)	972, 1414
Eam1104I	CTCTTC	5 cut(s)	145, 759, 917, 1165, 1512
EarI	CTCTTC	5 cut(s)	145, 759, 917, 1165, 1512
EciI	GGCGGA	1 cut(s)	474
Eco105I	TACGTA	1 cut(s)	537
Eco130I	CCWWGG	2 cut(s)	1114, 1417
Eco31I	GGTCTC	2 cut(s)	852, 919
Eco47I	GGWCC	3 cut(s)	23, 29, 36
Eco47III	AGCGCT	1 cut(s)	575
Eco57I	CTGAAG	1 cut(s)	1319
Eco88I	CYCGRG	4 cut(s)	32, 75, 915, 1657
Eco91I	GGTNACC	1 cut(s)	1675
EcoO109I	RGGNCCY	2 cut(s)	23, 36
EcoO65I	GGTNACC	1 cut(s)	1675
EcoRI	GAATTC	1 cut(s)	1666
EcoRII	CCWGG	1 cut(s)	25
EcoT14I	CCWWGG	2 cut(s)	1114, 1417
EcoT22I	ATGCAT	1 cut(s)	6
ErhI	CCWWGG	2 cut(s)	1114, 1417
FaeI	CATG	9 cut(s)	8, 472, 718, 827, 1022, 1118, 1421, 1808, 1956
FalI	AAGNNNNNCTT	4 cut(s)	1288, 1320, 1359, 1391
FaqI	GGGAC	3 cut(s)	15, 812, 1150
FatI	CATG	9 cut(s)	4, 468, 714, 823, 1018, 1114, 1417, 1804, 1952
FauI	CCCGC	1 cut(s)	628
FauNDI	CATATG	1 cut(s)	194
FbaI	TGATCA	1 cut(s)	652
Fnu4HI	GCNGC	9 cut(s)	276, 331, 523, 558, 624, 751, 1349, 1473, 1775
FokI	GGATG	5 cut(s)	274, 995, 1016, 1170, 1281
Fsp4HI	GCNGC	9 cut(s)	276, 331, 523, 558, 624, 751, 1349, 1473, 1775
FspBI	CTAG	1 cut(s)	746
GlaI	GCGC	1 cut(s)	575
GluI	GCNGC	9 cut(s)	276, 331, 523, 558, 624, 751, 1349, 1473, 1775
GsaI	CCCAGC	1 cut(s)	1486
GsuI	CTGGAG	1 cut(s)	258
HaeII	RGCGCY	1 cut(s)	577
HaeIII	GGCC	5 cut(s)	750, 974, 1017, 1416, 1437
HapII	CCGG	6 cut(s)	33, 340, 389, 488, 1226, 1680
HhaI	GCGC	1 cut(s)	576
Hin1II	CATG	9 cut(s)	8, 472, 718, 827, 1022, 1118, 1421, 1808, 1956
Hin6I	GCGC	1 cut(s)	574
HinP1I	GCGC	1 cut(s)	574
HincII	GTYRAC	1 cut(s)	1242
HindII	GTYRAC	1 cut(s)	1242
HindIII	AAGCTT	3 cut(s)	1302, 1609, 1850
HinfI	GANTC	5 cut(s)	153, 220, 664, 800, 934
HpaI	GTTAAC	1 cut(s)	1242
HpaII	CCGG	6 cut(s)	33, 340, 389, 488, 1226, 1680
HphI	GGTGA	4 cut(s)	457, 609, 929, 1687
Hpy166II	GTNNAC	3 cut(s)	397, 411, 1242
Hpy188III	TCNNGA	3 cut(s)	792, 917, 1121
Hpy8I	GTNNAC	3 cut(s)	397, 411, 1242
Hpy99I	CGWCG	1 cut(s)	518
HpyCH4III	ACNGT	5 cut(s)	126, 457, 542, 1038, 1400
HpyCH4IV	ACGT	4 cut(s)	536, 603, 817, 1535
HpyF10VI	GCNNNNNNNGC	6 cut(s)	493, 566, 965, 1805, 1814, 1849
HpySE526I	ACGT	4 cut(s)	536, 603, 817, 1535
Hsp92II	CATG	9 cut(s)	8, 472, 718, 827, 1022, 1118, 1421, 1808, 1956
HspAI	GCGC	1 cut(s)	574
Ksp22I	TGATCA	1 cut(s)	652
KspAI	GTTAAC	1 cut(s)	1242
KspI	CCGCGG	1 cut(s)	417
Kzo9I	GATC	5 cut(s)	418, 423, 614, 652, 770
LmnI	GCTCC	3 cut(s)	327, 607, 1771
Lsp1109I	GCAGC	5 cut(s)	544, 610, 1360, 1459, 1761
LweI	GCATC	6 cut(s)	252, 342, 973, 1148, 1925, 1953
MabI	ACCWGGT	1 cut(s)	25
MaeI	CTAG	1 cut(s)	746
MaeII	ACGT	4 cut(s)	536, 603, 817, 1535
MaeIII	GTNAC	7 cut(s)	9, 217, 307, 818, 1675, 1710, 1880
MalI	GATC	5 cut(s)	420, 425, 616, 654, 772
MboI	GATC	5 cut(s)	418, 423, 614, 652, 770
MflI	RGATCY	1 cut(s)	418
MhlI	GDGCHC	2 cut(s)	413, 1801
MlsI	TGGCCA	2 cut(s)	974, 1416
MluNI	TGGCCA	2 cut(s)	974, 1416
MlyI	GAGTC	3 cut(s)	162, 214, 794
MmeI	TCCRAC	4 cut(s)	239, 537, 1316, 1344
Mox20I	TGGCCA	2 cut(s)	974, 1416
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	3 cut(s)	1193, 1304, 1817
MscI	TGGCCA	2 cut(s)	974, 1416
MseI	TTAA	9 cut(s)	51, 696, 998, 1241, 1253, 1316, 1589, 1740, 1963
MslI	CAYNNNNRTG	1 cut(s)	404
Msp20I	TGGCCA	2 cut(s)	974, 1416
MspA1I	CMGCKG	3 cut(s)	278, 416, 623
MspI	CCGG	6 cut(s)	33, 340, 389, 488, 1226, 1680
MspR9I	CCNGG	5 cut(s)	27, 33, 34, 390, 1681
Mva1269I	GAATGC	1 cut(s)	970
MvaI	CCWGG	1 cut(s)	27
MvnI	CGCG	1 cut(s)	416
MwoI	GCNNNNNNNGC	6 cut(s)	493, 566, 965, 1805, 1814, 1849
NciI	CCSGG	4 cut(s)	33, 34, 390, 1681
NcoI	CCATGG	2 cut(s)	1114, 1417
NdeI	CATATG	1 cut(s)	194
NdeII	GATC	5 cut(s)	418, 423, 614, 652, 770
NlaIII	CATG	9 cut(s)	8, 472, 718, 827, 1022, 1118, 1421, 1808, 1956
NlaIV	GGNNCC	5 cut(s)	31, 37, 329, 420, 609
NmeAIII	GCCGAG	2 cut(s)	1126, 1289
NmuCI	GTSAC	4 cut(s)	217, 307, 818, 1675
NsiI	ATGCAT	1 cut(s)	6
PaeR7I	CTCGAG	2 cut(s)	75, 1657
PctI	GAATGC	1 cut(s)	970
PdmI	GAANNNNTTC	3 cut(s)	1193, 1304, 1817
PfeI	GAWTC	2 cut(s)	664, 934
PflFI	GACNNNGTC	1 cut(s)	27
PflMI	CCANNNNNTGG	3 cut(s)	236, 576, 1120
PkrI	GCNGC	9 cut(s)	277, 332, 524, 559, 625, 752, 1350, 1474, 1776
PleI	GAGTC	3 cut(s)	161, 214, 794
PpsI	GAGTC	3 cut(s)	161, 214, 794
Ppu21I	YACGTR	1 cut(s)	537
PpuMI	RGGWCCY	2 cut(s)	23, 36
PshBI	ATTAAT	1 cut(s)	1253
Psp5II	RGGWCCY	2 cut(s)	23, 36
Psp6I	CCWGG	1 cut(s)	25
PspEI	GGTNACC	1 cut(s)	1675
PspFI	CCCAGC	1 cut(s)	1482
PspGI	CCWGG	1 cut(s)	25
PspN4I	GGNNCC	5 cut(s)	31, 37, 329, 420, 609
PspPI	GGNCC	3 cut(s)	23, 29, 36
PspPPI	RGGWCCY	2 cut(s)	23, 36
PspXI	VCTCGAGB	2 cut(s)	75, 1657
PsrI	GAACNNNNNNTAC	4 cut(s)	1022, 1054, 1865, 1897
PstNI	CAGNNNCTG	1 cut(s)	647
PsuI	RGATCY	1 cut(s)	418
PsyI	GACNNNGTC	1 cut(s)	27
RsaI	GTAC	7 cut(s)	539, 599, 1035, 1341, 1397, 1655, 1957
RsaNI	GTAC	7 cut(s)	538, 598, 1034, 1340, 1396, 1654, 1956
RseI	CAYNNNNRTG	1 cut(s)	404
SacII	CCGCGG	1 cut(s)	417
SaqAI	TTAA	9 cut(s)	51, 696, 998, 1241, 1253, 1316, 1589, 1740, 1963
SatI	GCNGC	9 cut(s)	276, 331, 523, 558, 624, 751, 1349, 1473, 1775
Sau3AI	GATC	5 cut(s)	418, 423, 614, 652, 770
Sau96I	GGNCC	3 cut(s)	23, 29, 36
SchI	GAGTC	3 cut(s)	162, 214, 794
ScrFI	CCNGG	5 cut(s)	27, 33, 34, 390, 1681
SduI	GDGCHC	2 cut(s)	413, 1801
SexAI	ACCWGGT	1 cut(s)	25
SfaNI	GCATC	6 cut(s)	252, 342, 973, 1148, 1925, 1953
SfcI	CTRYAG	2 cut(s)	160, 1692
Sfr274I	CTCGAG	2 cut(s)	75, 1657
Sfr303I	CCGCGG	1 cut(s)	417
SgrBI	CCGCGG	1 cut(s)	417
SinI	GGWCC	3 cut(s)	23, 29, 36
SlaI	CTCGAG	2 cut(s)	75, 1657
SmaI	CCCGGG	1 cut(s)	34
SmiMI	CAYNNNNRTG	1 cut(s)	404
SmlI	CTYRAG	3 cut(s)	75, 312, 1657
SmoI	CTYRAG	3 cut(s)	75, 312, 1657
SnaBI	TACGTA	1 cut(s)	537
SsiI	CCGC	9 cut(s)	173, 276, 331, 414, 416, 485, 522, 621, 751
SspMI	CTAG	1 cut(s)	746
StyD4I	CCNGG	5 cut(s)	25, 31, 32, 388, 1679
StyI	CCWWGG	2 cut(s)	1114, 1417
TaaI	ACNGT	5 cut(s)	126, 457, 542, 1038, 1400
TaiI	ACGT	4 cut(s)	539, 606, 820, 1538
TaqI	TCGA	7 cut(s)	76, 793, 1053, 1561, 1658, 1718, 1933
TaqII	GACCGA	1 cut(s)	454
TatI	WGTACW	5 cut(s)	597, 1033, 1395, 1653, 1955
TauI	GCSGC	4 cut(s)	278, 333, 525, 753
TfiI	GAWTC	2 cut(s)	664, 934
Tru1I	TTAA	9 cut(s)	51, 696, 998, 1241, 1253, 1316, 1589, 1740, 1963
Tru9I	TTAA	9 cut(s)	51, 696, 998, 1241, 1253, 1316, 1589, 1740, 1963
TscAI	CASTG	7 cut(s)	129, 460, 744, 1284, 1335, 1405, 1815
TseFI	GTSAC	4 cut(s)	217, 307, 818, 1675
TseI	GCWGC	5 cut(s)	557, 623, 1348, 1472, 1774
Tsp45I	GTSAC	4 cut(s)	217, 307, 818, 1675
TspDTI	ATGAA	9 cut(s)	464, 798, 840, 977, 1020, 1074, 1086, 1898, 1941
TspGWI	ACGGA	1 cut(s)	1861
TspMI	CCCGGG	1 cut(s)	32
TspRI	CASTG	7 cut(s)	129, 460, 744, 1284, 1335, 1405, 1815
Tth111I	GACNNNGTC	1 cut(s)	27
Van91I	CCANNNNNTGG	3 cut(s)	236, 576, 1120
VneI	GTGCAC	1 cut(s)	409
VpaK11BI	GGWCC	3 cut(s)	23, 29, 36
VspI	ATTAAT	1 cut(s)	1253
XapI	RAATTY	5 cut(s)	530, 1048, 1193, 1666, 1735
XhoI	CTCGAG	2 cut(s)	75, 1657
XmaI	CCCGGG	1 cut(s)	32
XmnI	GAANNNNTTC	3 cut(s)	1193, 1304, 1817
XspI	CTAG	1 cut(s)	746
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.