Rh5DG537400

Belongs to the glycosyltransferase 2 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
82889903 .. 82894762
4860 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG537400.1

Sequence Viewer

Length: 2196 bp
ATGGGGAAGGGAGGGAACAGTTCACCATTATTTGAGACGAAGAGGGCCAAGGGGATAGTTCTGTATAGGCTTTTTGCTGCGTCTATTTTCGTGGGTATATGTTTCATCTGGGTTTACAGGGTGAGTCATATCCCAAAAGCTGGAGAAGATGGGAGGTTTGGTTGGATGGGTCTGCTGGGTGCTGAGTTATGGTTCGGGTTTTACTGGCTCCTCACTCAAGCCTGCCGGTGGAACCGCGTGTATCGGCACACCTTCAGGGACAGACTCTCGGAGAGATATGAGGATGAGTTGCCGGGAGTGGACATATTCGTGTGCACGGCAGACCCAATTATAGAGCCGCCGATGATGGTGATAAACACTGTTTTATCAGTAATGGCTTATGATTACCCACCGGAGAAGCTCAGCGTGTATCTATCCGATGATGGCGGATCCGAACTTACATGTTATGCTCTATTGGAAGCTGCTGAGTTTGCTAAGCATTGGATACCATATTGCAAGAAGTACAGTGTGGAGCCAAGGTCACCTGCTGCTTATTTTGCCTCACTAGCTTCTGATAATGCAGGGGATTTCACTCTCATTAAGAAATTATACAAAGACATGGAGAATAAAATCGAAATTGCAGTGAAGTTAGGCAGCATTTCTGAAGAAGTACGATCAAAACACAGAGGCTTTTCTCAGTGGGATTCGTATTCATCTCCACGTGACCATGACACCATTCTAAAAATAGTAATTGATGGGAGAGATCCAAATGCAAGAGATGTTGAAGGGTGTGGATTGCCAACCTTAGTGTATTTGGCTCGCGAGAAGAGACCCCAATATCACCATAACTTCAAAGCCGGAGCTATGAATGCACTGATTAGGGTATCTTCAAACATTAGCAATGGGAAGGTTATTCTTAATGTAGACTGTGATATGTATTCAAACAACTCTAAGGCCATAAGGGATGCACTCTGCTTCTTCCTGGATGAAGATAAAGGCCAGGAGATTGCATTCGTACAGTTCCCACAGAATTTCGAAAATGTTACCAAGAATGACGTATATAGTAGTACACTACGAATAATCAGTGAGGTGGAATTTCATGGTTTGGATGGTTATGGGGGCCCTTTATATATTGGAACTGGATGCTTCCACAGAAGAGATACTCTTTGTGGGAGGAAGTTCAGCAAAGGATATAAGAGTGAACTGAAGTGGGAGAATAGAAAAGGAGAAGAAACAAGCATTCCTAAATTGGAAGAAAGTTCAAAAAGTCTAGCAAGTTGTACATTTGAAGAGAACACTCAATGGGGAAAAGAGATGGGTTTGAAATATGGTTGTCCGGTTGAGGATGTTATAACAGGGTTATCCATCCAATGCCGTGGATGGAAATCAGTGTACTGCAATCCAACTAGGAAAGCTTTCTTAGGATTAGCTCCAACTACACTGCCTCAGACACTTTTGCAGCACAAGAGATGGTCAGAAGGTGATTTCCAGATTTTGGTTTCTAAGTATAGCCCTGCATTGTATGGGCATGGAAAGATTAGTTTAGGCCTTCAACTTGGATATTGCTGCTACTGCCTGTGGGCTCCAAATTGCTTGGCGACACTATTTTACTCAATTCTCCCTTCAATTTACCTTCTTAGAGGCATTTCTGTATTCCCACAGATCTCAAGTCCGTGGTTCATACCATTTGCGTATGTGATAATTGCCAAGTACACTTGGAGCTTTGGGGAGTTTTTGTGGTCTGGTGGCACAATCTTGGGATGGTGGAACGACCAACGAATATGGCTTTACAAAAGAACAAGCTCCTACCTATTTGCCTTCATCGATACCATTTTGTACTGTCTGGGGTATTCGGATTCAGCGTTTGTAATAACAGCCAAGGTGGCTGATGAAGATGTGTCACAACGATACGAGAAAGAGATTATGGAATTCGGAGCCTCATCTCCAATGTTCGTCATATTAGCAACAGTTGCATTGCTCAATTTGTACTGCTTTGCTGGGTTTCTCAAGGAAGCGATCACTAGAAAAGGCATTGTTGGAGTTTATGAGACAATGGCTTTGCAAATTCTTCTATGTGGTGTTTTAATTGTCATCAACCTGCCTTTGTACCAAGCTCTTTACTTGAGGAAAGACAGTGGAAAAATGCCAAGTTCTGTGGTATTTAAATCGATGGCATTTGTTGCATTTTCTTGTGTATGTACTAAATTCTTGTATTAA

Protein Analysis

731

Amino Acids

82.85

Weight (kDa)

8.16

Isoelectric Point (pI)

40.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cellulose_synt PF03552 100 - 389 3.2e-90 Cellulose synthase
Cellulose_synt PF03552 414 - 716 3.6e-43 Cellulose synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000273)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G55850
fragaria_vesca FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42743 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42750 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42760 FvH4_3g42770 FvH4_3g42800 FvH4_3g42810 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42890 FvH4_3g42900
malus_domestica MD03G1028800.v1.1 MD03G1028900.v1.1 MD03G1029000.v1.1 MD03G1029100.v1.1
prunus_persica Prupe.6G024800_v2.0.a1 Prupe.6G024900_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025000_v2.0.a1 Prupe.6G025100_v2.0.a1 Prupe.6G025100_v2.0.a1
pyrus_communis pycom01g03430 pycom03g02330 pycom03g02340 pycom03g02360 pycom03g02380 pycom03g02400 pycom03g02410 pycom05g13920
rosa_chinensis RchiOBHm_Chr5g0076821 RchiOBHm_Chr5g0076831 RchiOBHm_Chr5g0076851 RchiOBHm_Chr5g0076871 RchiOBHm_Chr5g0076891 RchiOBHm_Chr5g0076901 RchiOBHm_Chr5g0076911 RchiOBHm_Chr5g0076921
rosa_laevigata RLG00000036625 RLG00000036626 RLG00000036627 RLG00000036630 RLG00000036632 RLG00000036634 RLG00000036635
rosa_multiflora Rmu_co8084432.1_g000001 Rmu_co8208886.1_g000001 Rmu_co8325177.1_g000001 Rmu_sc0003799.1_g000001 Rmu_sc0003799.1_g000002 Rmu_sc0003799.1_g000006 Rmu_sc0003799.1_g000009 Rmu_sc0004655.1_g000002 Rmu_sc0004655.1_g000014 Rmu_sc0004655.1_g000015 Rmu_sc0007021.1_g000003 Rmu_sc0007021.1_g000013 Rmu_sc0007021.1_g000014 Rmu_sc0008244.1_g000002 Rmu_sc0013263.1_g000004 Rmu_sc0014402.1_g000001 Rmu_ssc0000184.1_g000003 Rmu_ssc0000184.1_g000004 Rmu_ssc0000184.1_g000005 Rmu_ssc0000184.1_g000006 Rmu_ssc0000184.1_g000014 Rmu_ssc0000184.1_g000021
rosa_roxburghii Rroxscaffold_1G00005210 Rroxscaffold_1G00005220 Rroxscaffold_1G00005250 Rroxscaffold_1G00005280 Rroxscaffold_1G00005300 Rroxscaffold_1G00005310
rosa_rugosa Rorug05G0449200 Rorug05G0449300 Rorug05G0449300 Rorug05G0449300 Rorug05G0449500 Rorug05G0449600
rosa_samantha Rh5AG503600 Rh5AG503700 Rh5AG503900 Rh5AG504000 Rh5AG504100 Rh5BG525000 Rh5BG525200 Rh5BG525300 Rh5BG525500 Rh5BG525700 Rh5BG525900 Rh5BG526000 Rh5CG548600 Rh5CG548800 Rh5CG548900 Rh5CG549100 Rh5CG549300 Rh5CG549500 Rh5DG537300 Rh5DG537400 Rh5DG537500 Rh5DG537700 Rh5DG537900 Rh5DG538000 Rh5DG544100
rosa_wichuraiana Rw0G009920 Rw5G046720 Rw5G046730 Rw5G047200 Rw5G047210 Rw5G047240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1331
AarI CACCTGC 1 cut(s) 532
Acc36I ACCTGC 2 cut(s) 532, 2085
AccB7I CCANNNNNTGG 2 cut(s) 140, 1474
AccI GTMKAC 1 cut(s) 903
AccII CGCG 2 cut(s) 237, 801
AciI CCGC 3 cut(s) 235, 338, 426
AclWI GGATC 3 cut(s) 423, 436, 737
AcsI RAATTY 5 cut(s) 1009, 1073, 1907, 2043, 2183
AcuI CTGAAG 3 cut(s) 238, 663, 1205
AcvI CACGTG 1 cut(s) 701
AfiI CCNNNNNNNGG 3 cut(s) 140, 228, 1474
AflIII ACRYGT 1 cut(s) 440
AgsI TTSAA 9 cut(s) 764, 832, 870, 921, 1242, 1268, 1303, 1532, 1605
AjnI CCWGG 2 cut(s) 960, 978
Alw21I GWGCWC 1 cut(s) 317
Alw26I GTCTC 3 cut(s) 29, 802, 2021
Alw44I GTGCAC 1 cut(s) 313
AlwI GGATC 3 cut(s) 423, 436, 737
AoxI GGCC 5 cut(s) 45, 933, 976, 1099, 1525
ApaI GGGCCC 1 cut(s) 1103
ApaLI GTGCAC 1 cut(s) 313
ApeKI GCWGC 6 cut(s) 77, 461, 527, 633, 1438, 1545
ApoI RAATTY 5 cut(s) 1009, 1073, 1907, 2043, 2183
ArsI GACNNNNNNTTYG 2 cut(s) 2020, 2052
Asp700I GAANNNNTTC 1 cut(s) 1394
AspS9I GGNCC 3 cut(s) 45, 1099, 1100
AsuC2I CCSGG 1 cut(s) 294
AsuHPI GGTGA 6 cut(s) 15, 133, 361, 513, 812, 1472
AsuII TTCGAA 1 cut(s) 1014
BaeGI GKGCMC 2 cut(s) 317, 1103
BamHI GGATCC 1 cut(s) 428
BanII GRGCYC 2 cut(s) 1103, 1564
BbrPI CACGTG 1 cut(s) 701
Bbv12I GWGCWC 1 cut(s) 317
BbvI GCAGC 6 cut(s) 64, 448, 514, 645, 1450, 1532
BceAI ACGGC 2 cut(s) 333, 1338
BciT130I CCWGG 2 cut(s) 962, 980
BciVI GTATCC 1 cut(s) 477
BcnI CCSGG 1 cut(s) 294
BcoDI GTCTC 3 cut(s) 29, 802, 2021
BfaI CTAG 4 cut(s) 545, 1250, 1386, 2001
BfuAI ACCTGC 2 cut(s) 532, 2085
BfuI GTATCC 1 cut(s) 477
BglI GCCNNNNNGGC 1 cut(s) 1862
BglII AGATCT 1 cut(s) 1641
BisI GCNGC 7 cut(s) 78, 338, 462, 528, 634, 1439, 1546
BlpI GCTNAGC 2 cut(s) 401, 474
BlsI GCNGC 7 cut(s) 79, 339, 463, 529, 635, 1440, 1547
Bme1390I CCNGG 3 cut(s) 294, 962, 980
BmgT120I GGNCC 3 cut(s) 45, 1099, 1100
BmiI GGNNCC 8 cut(s) 209, 233, 430, 513, 1100, 1101, 1563, 1915
BmrFI CCNGG 3 cut(s) 294, 962, 980
BmsI GCATC 2 cut(s) 934, 1112
BpmI CTGGAG 1 cut(s) 162
Bpu1102I GCTNAGC 2 cut(s) 401, 474
Bpu14I TTCGAA 1 cut(s) 1014
BpuEI CTTGAG 4 cut(s) 201, 1630, 1970, 2122
BpuMI CCSGG 1 cut(s) 294
Bsa29I ATCGAT 2 cut(s) 1803, 2147
BsaAI YACGTR 1 cut(s) 701
BsaBI GATNNNNATC 1 cut(s) 1363
BsaI GGTCTC 1 cut(s) 802
BsaJI CCNNGG 5 cut(s) 48, 515, 1354, 1652, 1857
BsaWI WCCGGW 2 cut(s) 391, 1315
BsaXI ACNNNNNCTCC 6 cut(s) 145, 175, 503, 533, 1700, 1730
Bsc4I CCNNNNNNNGG 3 cut(s) 140, 228, 1474
Bse118I RCCGGY 1 cut(s) 225
Bse1I ACTGG 2 cut(s) 209, 1123
Bse3DI GCAATG 2 cut(s) 886, 1952
Bse8I GATNNNNATC 1 cut(s) 1363
BseBI CCWGG 2 cut(s) 962, 980
BseCI ATCGAT 2 cut(s) 1803, 2147
BseDI CCNNGG 5 cut(s) 48, 515, 1354, 1652, 1857
BseJI GATNNNNATC 1 cut(s) 1363
BseLI CCNNNNNNNGG 3 cut(s) 140, 228, 1474
BseMI GCAATG 2 cut(s) 886, 1952
BseMII CTCAG 5 cut(s) 174, 415, 456, 689, 1439
BseNI ACTGG 2 cut(s) 209, 1123
BseRI GAGGAG 1 cut(s) 200
BseSI GKGCMC 2 cut(s) 317, 1103
BseXI GCAGC 6 cut(s) 64, 448, 514, 645, 1450, 1532
BseYI CCCAGC 2 cut(s) 175, 1976
Bsh1236I CGCG 2 cut(s) 237, 801
BshFI GGCC 5 cut(s) 47, 935, 978, 1101, 1527
BshVI ATCGAT 2 cut(s) 1803, 2147
BsiHKAI GWGCWC 1 cut(s) 317
BsiSI CCGG 5 cut(s) 226, 293, 392, 837, 1316
BslFI GGGAC 1 cut(s) 272
BslI CCNNNNNNNGG 3 cut(s) 140, 228, 1474
BsmAI GTCTC 3 cut(s) 29, 802, 2021
BsmBI CGTCTC 1 cut(s) 29
BsmFI GGGAC 1 cut(s) 272
BsmI GAATGC 3 cut(s) 853, 989, 1218
BsnI GGCC 5 cut(s) 47, 935, 978, 1101, 1527
Bso31I GGTCTC 1 cut(s) 802
Bsp119I TTCGAA 1 cut(s) 1014
Bsp120I GGGCCC 1 cut(s) 1099
Bsp1286I GDGCHC 3 cut(s) 317, 1103, 1564
Bsp1407I TGTACA 1 cut(s) 1259
Bsp143I GATC 5 cut(s) 428, 653, 742, 1641, 1995
Bsp1720I GCTNAGC 2 cut(s) 401, 474
Bsp68I TCGCGA 1 cut(s) 801
BspACI CCGC 3 cut(s) 235, 338, 426
BspANI GGCC 5 cut(s) 47, 935, 978, 1101, 1527
BspCNI CTCAG 5 cut(s) 175, 414, 457, 688, 1438
BspDI ATCGAT 2 cut(s) 1803, 2147
BspFNI CGCG 2 cut(s) 237, 801
BspLI GGNNCC 8 cut(s) 209, 233, 430, 513, 1100, 1101, 1563, 1915
BspMI ACCTGC 2 cut(s) 532, 2085
BspPI GGATC 3 cut(s) 423, 436, 737
BspT104I TTCGAA 1 cut(s) 1014
BspTNI GGTCTC 1 cut(s) 802
BsrDI GCAATG 2 cut(s) 886, 1952
BsrFI RCCGGY 1 cut(s) 225
BsrGI TGTACA 1 cut(s) 1259
BsrI ACTGG 2 cut(s) 209, 1123
BssAI RCCGGY 1 cut(s) 225
BssECI CCNNGG 5 cut(s) 48, 515, 1354, 1652, 1857
BssMI GATC 5 cut(s) 428, 653, 742, 1641, 1995
BssT1I CCWWGG 3 cut(s) 48, 515, 1857
Bst2UI CCWGG 2 cut(s) 962, 980
Bst4CI ACNGT 8 cut(s) 20, 361, 506, 908, 999, 1820, 1948, 2114
Bst6I CTCTTC 4 cut(s) 35, 800, 1129, 1263
BstAPI GCANNNNNTGC 2 cut(s) 1949, 2159
BstAUI TGTACA 1 cut(s) 1259
BstBAI YACGTR 1 cut(s) 701
BstBI TTCGAA 1 cut(s) 1014
BstC8I GCNNGC 2 cut(s) 223, 799
BstDSI CCRYGG 2 cut(s) 1354, 1652
BstEII GGTNACC 1 cut(s) 519
BstFNI CGCG 2 cut(s) 237, 801
BstKTI GATC 5 cut(s) 431, 656, 745, 1644, 1998
BstMAI GTCTC 3 cut(s) 29, 802, 2021
BstMBI GATC 5 cut(s) 428, 653, 742, 1641, 1995
BstMWI GCNNNNNNNGC 8 cut(s) 470, 536, 545, 848, 1551, 1862, 1949, 2159
BstNI CCWGG 2 cut(s) 962, 980
BstNSI RCATGY 1 cut(s) 444
BstPI GGTNACC 1 cut(s) 519
BstSCI CCNGG 3 cut(s) 292, 960, 978
BstSLI GKGCMC 2 cut(s) 317, 1103
BstUI CGCG 2 cut(s) 237, 801
BstV1I GCAGC 6 cut(s) 64, 448, 514, 645, 1450, 1532
BstX2I RGATCY 3 cut(s) 428, 742, 1641
BstXI CCANNNNNNTGG 1 cut(s) 1355
BstYI RGATCY 3 cut(s) 428, 742, 1641
Bsu15I ATCGAT 2 cut(s) 1803, 2147
BsuI GTATCC 1 cut(s) 477
BsuRI GGCC 5 cut(s) 47, 935, 978, 1101, 1527
BsuTUI ATCGAT 2 cut(s) 1803, 2147
BtgI CCRYGG 2 cut(s) 1354, 1652
BtsI GCAGTG 2 cut(s) 627, 1418
BtsIMutI CAGTG 9 cut(s) 357, 511, 627, 683, 851, 1069, 1374, 1418, 2119
BtuMI TCGCGA 1 cut(s) 801
BveI ACCTGC 2 cut(s) 532, 2085
Cac8I GCNNGC 2 cut(s) 223, 799
Cfr10I RCCGGY 1 cut(s) 225
Cfr13I GGNCC 3 cut(s) 45, 1099, 1100
ClaI ATCGAT 2 cut(s) 1803, 2147
CseI GACGC 1 cut(s) 69
CspCI CAANNNNNGTGG 2 cut(s) 2115, 2150
CviAII CATG 5 cut(s) 441, 598, 707, 1079, 1508
DpnI GATC 5 cut(s) 430, 655, 744, 1643, 1997
DpnII GATC 5 cut(s) 428, 653, 742, 1641, 1995
DraI TTTAAA 1 cut(s) 2143
Eam1104I CTCTTC 4 cut(s) 35, 800, 1129, 1263
EarI CTCTTC 4 cut(s) 35, 800, 1129, 1263
EciI GGCGGA 1 cut(s) 441
Eco130I CCWWGG 3 cut(s) 48, 515, 1857
Eco147I AGGCCT 1 cut(s) 1527
Eco24I GRGCYC 2 cut(s) 1103, 1564
Eco31I GGTCTC 1 cut(s) 802
Eco57I CTGAAG 3 cut(s) 238, 663, 1205
Eco72I CACGTG 1 cut(s) 701
Eco91I GGTNACC 1 cut(s) 519
EcoO109I RGGNCCY 2 cut(s) 1099, 1100
EcoO65I GGTNACC 1 cut(s) 519
EcoRI GAATTC 1 cut(s) 1907
EcoRII CCWGG 2 cut(s) 960, 978
EcoT14I CCWWGG 3 cut(s) 48, 515, 1857
EcoT38I GRGCYC 2 cut(s) 1103, 1564
ErhI CCWWGG 3 cut(s) 48, 515, 1857
Esp3I CGTCTC 1 cut(s) 29
FaeI CATG 5 cut(s) 444, 601, 710, 1082, 1511
FaqI GGGAC 1 cut(s) 272
FatI CATG 5 cut(s) 440, 597, 706, 1078, 1507
FblI GTMKAC 1 cut(s) 903
Fnu4HI GCNGC 7 cut(s) 78, 338, 462, 528, 634, 1439, 1546
FriOI GRGCYC 2 cut(s) 1103, 1564
Fsp4HI GCNGC 7 cut(s) 78, 338, 462, 528, 634, 1439, 1546
FspBI CTAG 4 cut(s) 545, 1250, 1386, 2001
GluI GCNGC 7 cut(s) 78, 338, 462, 528, 634, 1439, 1546
GsaI CCCAGC 2 cut(s) 179, 1980
GsuI CTGGAG 1 cut(s) 162
HaeIII GGCC 5 cut(s) 47, 935, 978, 1101, 1527
HapII CCGG 5 cut(s) 226, 293, 392, 837, 1316
HgaI GACGC 1 cut(s) 69
Hin1II CATG 5 cut(s) 444, 601, 710, 1082, 1511
HindIII AAGCTT 1 cut(s) 1392
HinfI GANTC 4 cut(s) 124, 264, 683, 1835
HpaII CCGG 5 cut(s) 226, 293, 392, 837, 1316
HphI GGTGA 6 cut(s) 15, 133, 361, 513, 812, 1472
Hpy166II GTNNAC 9 cut(s) 23, 115, 301, 315, 904, 1049, 1181, 1372, 1692
Hpy188I TCNGA 9 cut(s) 271, 418, 433, 553, 643, 1428, 1456, 1834, 1913
Hpy188III TCNNGA 2 cut(s) 800, 1468
Hpy8I GTNNAC 9 cut(s) 23, 115, 301, 315, 904, 1049, 1181, 1372, 1692
HpyAV CCTTC 8 cut(s) 262, 758, 880, 1451, 1538, 1611, 1622, 1807
HpyCH4III ACNGT 8 cut(s) 20, 361, 506, 908, 999, 1820, 1948, 2114
HpyCH4IV ACGT 2 cut(s) 700, 1035
HpyF10VI GCNNNNNNNGC 8 cut(s) 470, 536, 545, 848, 1551, 1862, 1949, 2159
HpySE526I ACGT 2 cut(s) 700, 1035
Hsp92II CATG 5 cut(s) 444, 601, 710, 1082, 1511
Kzo9I GATC 5 cut(s) 428, 653, 742, 1641, 1995
LmnI GCTCC 8 cut(s) 213, 511, 839, 1414, 1567, 1698, 1787, 1913
Lsp1109I GCAGC 6 cut(s) 64, 448, 514, 645, 1450, 1532
LweI GCATC 2 cut(s) 934, 1112
MaeI CTAG 4 cut(s) 545, 1250, 1386, 2001
MaeII ACGT 2 cut(s) 700, 1035
MaeIII GTNAC 4 cut(s) 519, 701, 1021, 1878
MalI GATC 5 cut(s) 430, 655, 744, 1643, 1997
MboI GATC 5 cut(s) 428, 653, 742, 1641, 1995
MflI RGATCY 3 cut(s) 428, 742, 1641
MhlI GDGCHC 3 cut(s) 317, 1103, 1564
MlyI GAGTC 2 cut(s) 133, 258
MmeI TCCRAC 4 cut(s) 143, 1406, 1436, 1996
MroXI GAANNNNTTC 1 cut(s) 1394
MseI TTAA 5 cut(s) 579, 897, 2063, 2142, 2194
MslI CAYNNNNRTG 1 cut(s) 308
MspI CCGG 5 cut(s) 226, 293, 392, 837, 1316
MspR9I CCNGG 3 cut(s) 294, 962, 980
Mva1269I GAATGC 3 cut(s) 853, 989, 1218
MvaI CCWGG 2 cut(s) 962, 980
MvnI CGCG 2 cut(s) 237, 801
MwoI GCNNNNNNNGC 8 cut(s) 470, 536, 545, 848, 1551, 1862, 1949, 2159
NciI CCSGG 1 cut(s) 294
NdeII GATC 5 cut(s) 428, 653, 742, 1641, 1995
NlaIII CATG 5 cut(s) 444, 601, 710, 1082, 1511
NlaIV GGNNCC 8 cut(s) 209, 233, 430, 513, 1100, 1101, 1563, 1915
NmuCI GTSAC 3 cut(s) 519, 701, 1878
NruI TCGCGA 1 cut(s) 801
NspI RCATGY 1 cut(s) 444
NspV TTCGAA 1 cut(s) 1014
PaqCI CACCTGC 1 cut(s) 532
PceI AGGCCT 1 cut(s) 1527
PciI ACATGT 1 cut(s) 440
PcsI WCGNNNNNNNCGW 1 cut(s) 1838
PctI GAATGC 3 cut(s) 853, 989, 1218
PdmI GAANNNNTTC 1 cut(s) 1394
PfeI GAWTC 2 cut(s) 683, 1835
PflMI CCANNNNNTGG 2 cut(s) 140, 1474
PfoI TCCNGGA 1 cut(s) 960
PkrI GCNGC 7 cut(s) 79, 339, 463, 529, 635, 1440, 1547
PleI GAGTC 2 cut(s) 132, 258
PmaCI CACGTG 1 cut(s) 701
PmlI CACGTG 1 cut(s) 701
PpsI GAGTC 2 cut(s) 132, 258
Ppu21I YACGTR 1 cut(s) 701
PscI ACATGT 1 cut(s) 440
PsiI TTATAA 1 cut(s) 1331
Psp6I CCWGG 2 cut(s) 960, 978
PspCI CACGTG 1 cut(s) 701
PspEI GGTNACC 1 cut(s) 519
PspFI CCCAGC 2 cut(s) 175, 1976
PspGI CCWGG 2 cut(s) 960, 978
PspN4I GGNNCC 8 cut(s) 209, 233, 430, 513, 1100, 1101, 1563, 1915
PspOMI GGGCCC 1 cut(s) 1099
PspPI GGNCC 3 cut(s) 45, 1099, 1100
PsuI RGATCY 3 cut(s) 428, 742, 1641
RruI TCGCGA 1 cut(s) 801
RseI CAYNNNNRTG 1 cut(s) 308
SaqAI TTAA 5 cut(s) 579, 897, 2063, 2142, 2194
SatI GCNGC 7 cut(s) 78, 338, 462, 528, 634, 1439, 1546
Sau3AI GATC 5 cut(s) 428, 653, 742, 1641, 1995
Sau96I GGNCC 3 cut(s) 45, 1099, 1100
SchI GAGTC 2 cut(s) 133, 258
ScrFI CCNGG 3 cut(s) 294, 962, 980
SduI GDGCHC 3 cut(s) 317, 1103, 1564
SfaNI GCATC 2 cut(s) 934, 1112
SfuI TTCGAA 1 cut(s) 1014
SmiI ATTTAAAT 1 cut(s) 2143
SmiMI CAYNNNNRTG 1 cut(s) 308
SmlI CTYRAG 4 cut(s) 216, 1645, 1985, 2101
SmoI CTYRAG 4 cut(s) 216, 1645, 1985, 2101
SseBI AGGCCT 1 cut(s) 1527
SsiI CCGC 3 cut(s) 235, 338, 426
SspMI CTAG 4 cut(s) 545, 1250, 1386, 2001
StuI AGGCCT 1 cut(s) 1527
StyD4I CCNGG 3 cut(s) 292, 960, 978
StyI CCWWGG 3 cut(s) 48, 515, 1857
SwaI ATTTAAAT 1 cut(s) 2143
TaaI ACNGT 8 cut(s) 20, 361, 506, 908, 999, 1820, 1948, 2114
TaiI ACGT 2 cut(s) 703, 1038
TaqI TCGA 4 cut(s) 612, 1014, 1803, 2147
TatI WGTACW 8 cut(s) 501, 1046, 1259, 1371, 1689, 1815, 1965, 2177
TauI GCSGC 1 cut(s) 340
TfiI GAWTC 2 cut(s) 683, 1835
Tru1I TTAA 5 cut(s) 579, 897, 2063, 2142, 2194
Tru9I TTAA 5 cut(s) 579, 897, 2063, 2142, 2194
TscAI CASTG 9 cut(s) 364, 511, 627, 683, 858, 1069, 1374, 1425, 2119
TseFI GTSAC 3 cut(s) 519, 701, 1878
TseI GCWGC 6 cut(s) 77, 461, 527, 633, 1438, 1545
Tsp45I GTSAC 3 cut(s) 519, 701, 1878
TspDTI ATGAA 8 cut(s) 94, 681, 860, 981, 1067, 1648, 1789, 1884
TspGWI ACGGA 1 cut(s) 1641
TspRI CASTG 9 cut(s) 364, 511, 627, 683, 858, 1069, 1374, 1425, 2119
Van91I CCANNNNNTGG 2 cut(s) 140, 1474
VneI GTGCAC 1 cut(s) 313
XapI RAATTY 5 cut(s) 1009, 1073, 1907, 2043, 2183
XceI RCATGY 1 cut(s) 444
XmiI GTMKAC 1 cut(s) 903
XmnI GAANNNNTTC 1 cut(s) 1394
XspI CTAG 4 cut(s) 545, 1250, 1386, 2001
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.