MD07G1202100.v1.1

Protein of unknown function (DUF 659)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0000444
Physical Location & Seq
Forward (+)
28019128 .. 28022070
2943 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1202100.v1.1.491

Sequence Viewer

Length: 1851 bp
ATGACAAGTGGGAGGAGTTTGGAGAGAAGGAAAAGGGGGAGGGGCAAAAGTTCTTGTGCAGGACATAGTGCTCTTGTTGTTAGTAATAGTGTTGCGTTAGGTCCTCCAAAAGTGAACAATTTTGTTCACGAGGCAATTGGAAGGTTTTTGTATGATATTGGGGCCCCTCCAGATGCAGTGAACTCTGCGTATTTCCAACCGATGATTGATGCAATTGCTTCAGGTGGTTCAGGGGTTGTGCCTCCTACATACCATGATATTCGTAGTTGGATATTGAAGAATTCGGTTGAAGAAGTGAGGAACAATATTGATAAACATAGGGAAACATGGGGAAGAACTGGTTGTTCAGTCTTGGTCGATCAGTGGAACACAGAGTCAGGTAAGGTTTTGCTAAGTTTTTTGGTGTACTGTCCTGAAGGAACAGTTTTTTGGGAATCTGTGGATGCATCAGACATTATAAATTCATCGGATGCCCTTTACGAACTGCTTAGGAGAGTGGTAGAAGAAGTTGGAGTAAAAGATGTGCTGCAGGTGATTACTAGTGGTGAAGAGCAATGTATGGTTGCAGGGAGAAGGTTGACTGATACTTTCCCTACGCTATATTGGACTCCATGTGCAGCTCGGTGCTTAGATCTAATGCTCGAAGATTTTGGTAACATTGAGTGGATAAATACGGTCATTGAACAAGCAAGGTCCATTACAAAGTTTGTGTACAATCATAGTGTAGTGTTGAATATGGTCAGAAGGTCTACTTTTGGCAATGATATTGTAGAACCAGGTGCCACTCGCTTCTCAACAAACTTTACAACACTAAAACGACTGGTTGATCTAAAACACTGTTTACAGGTTATGGTTACTTCACAGGAGTGGATGGACTCCCTATATTCAAAGGAACCGGGGGGACTGGAGATGTTAGATCTTATTAGTAGTCAGTCATTTTGGTCCTCATGCATCCTGATTGTCGGCCTGACAAATCCTCTCTTGCGGGTTTTGAGAATGGTTGGTAGTGAGAAGAGGCCTGCAATGGGATACGTGTATGCTGGAATGTATCGGGCAAAAGAAACAATTAAGAAAGAACTCGTCAAGAGAGAGGAGTACATGATATACTGGAATATCATAGATCAACGATGGGAACAGCAGTGGCGTTCTCCTCTTCATGCTGCAGGCTTCTACCTTAACCCCAAAATATTTTATAGTTTCGAAGGAGATATGCATGGTGATATCCTCTCACATATGTTTGATTGCATCGAGAGATTGGTTCCTGATACAAAAGTCCAAGATAAAATCATCAAAGAGCTAAATTTGTACAAGAGTGCTGCTGGAGATTTTCGAAGGAAGATGGCAATTAGGGCTAAAGACACTCTGCTTCCTGCTGAATGGTGGTCAACATATGGAGGAGGTTGCCCAAATTTGACACGCTTGGCAATCCGAATTCTCAGTCAAACTTGCAGTTCGATTGGGTGCAGGCGAAATGAGATTCCTTTTGAGAGAGCACACAACACAAGGAACTGCCTTGAGCGTCAACGTCTCAGTGACCTTGTCTTTGTTCAGTATAACTTGCGACTGAAACAAATGGTTGATAAGAACAGCGAACAAGATGTTATGGATCCCATATCATTTGAAAACATTAGCATGACGGAAGACTGGGTTACCGGGAAGGACATGTGCTTAGATGACAATGGTAGTTTCGACTGGATGGAACTCGATTCAACCTCTGCCAGCACAATGCTTTTAGGGCCGTCCAATGATGATGCCGATGACTTGGGCTCTGGTTTTTATGATTATGAGATCTTTAGCAGAGCAAAACACGGTGAAGAGGAAAATGTTGAAGACAATGTAGAAAATCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF659 Dimer_Tnp_hAT zf-BED

Protein Analysis

617

Amino Acids

70.07

Weight (kDa)

5.38

Isoelectric Point (pI)

50.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF659 PF04937 82 - 233 3.3e-59 Domain of unknown function (DUF659)
Dimer_Tnp_hAT PF05699 432 - 520 5.3e-11 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000444)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22220 AT3G22220 AT3G22220 AT3G22220 AT4G15020 AT4G15020
fragaria_vesca FvH4_6g39601 FvH4_6g39601 FvH4_6g39601 FvH4_6g39601 FvH4_6g39601 FvH4_7g22891 FvH4_7g22891 FvH4_7g22891
malus_domestica MD01G1137200.v1.1 MD02G1265900.v1.1 MD07G1202100.v1.1 MD09G1137900.v1.1 MD09G1138100.v1.1 MD17G1128400.v1.1
prunus_persica Prupe.2G058600_v2.0.a1 Prupe.2G058600_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1
pyrus_communis pycom01g15800 pycom01g15810 pycom01g15840 pycom02g22730 pycom07g18920 pycom07g18930 pycom09g05900 pycom17g12060
rosa_chinensis RchiOBHm_Chr1g0368051 RchiOBHm_Chr2g0153631 RchiOBHm_Chr2g0153641 RchiOBHm_Chr7g0237231
rosa_laevigata RLG00000001022 RLG00000020718
rosa_multiflora Rmu_sc0002117.1_g000006 Rmu_sc0004952.1_g000008 Rmu_sc0005823.1_g000001 Rmu_sc0013273.1_g000001 Rmu_sc0028071.1_g000001
rosa_roxburghii Rroxscaffold_1G00016080 Rroxscaffold_2G00094830 Rroxscaffold_4G00288900
rosa_rugosa Rorug01G0338600 Rorug01G0338700 Rorug02G0441100 Rorug02G0441200 Rorug04G0167900 Rorug07G0273200 Rorug07G0273300 Rorug07G0297100 Rorug07G0297200 Rorug07G0297300
rosa_samantha Rh1AG102500 Rh1AG102600 Rh1AG102700 Rh1AG345600 Rh1BG307900 Rh1CG323500 Rh1DG340000 Rh2AG504100 Rh2BG514800 Rh2CG490100 Rh2DG526900 Rh7AG451500 Rh7AG451700 Rh7AG459100 Rh7AG459200 Rh7BG400700 Rh7BG400800 Rh7BG421300 Rh7BG421400 Rh7BG423400 Rh7BG423500 Rh7BG423800 Rh7BG423900 Rh7CG471000 Rh7CG471100 Rh7CG471200
rosa_wichuraiana Rw1G030760 Rw2G041430 Rw5G036050 Rw7G038020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 458
AarI CACCTGC 1 cut(s) 520
Acc36I ACCTGC 1 cut(s) 520
AccB1I GGYRCC 1 cut(s) 779
AccI GTMKAC 1 cut(s) 749
AciI CCGC 1 cut(s) 985
AclWI GGATC 2 cut(s) 1601, 1614
AcsI RAATTY 5 cut(s) 280, 460, 1300, 1408, 1431
AcuI CTGAAG 2 cut(s) 204, 435
AfaI GTAC 4 cut(s) 407, 713, 1097, 1307
AfiI CCNNNNNNNGG 1 cut(s) 1025
AflIII ACRYGT 2 cut(s) 1032, 1662
AgsI TTSAA 8 cut(s) 277, 290, 683, 733, 888, 1622, 1710, 1829
AhlI ACTAGT 1 cut(s) 539
AjnI CCWGG 1 cut(s) 775
AjuI GAANNNNNNNTTGG 2 cut(s) 412, 444
AleI CACNNNNGTG 1 cut(s) 865
AluBI AGCT 2 cut(s) 620, 1297
AluI AGCT 2 cut(s) 620, 1297
Alw21I GWGCWC 2 cut(s) 73, 1495
Alw26I GTCTC 1 cut(s) 1532
AlwI GGATC 2 cut(s) 1601, 1614
AoxI GGCC 4 cut(s) 162, 964, 1016, 1736
ApaI GGGCCC 1 cut(s) 166
ApeKI GCWGC 4 cut(s) 526, 617, 1160, 1316
ApoI RAATTY 5 cut(s) 280, 460, 1300, 1408, 1431
ArsI GACNNNNNNTTYG 4 cut(s) 1423, 1455, 1526, 1558
AspS9I GGNCC 6 cut(s) 101, 162, 163, 693, 942, 1736
AsuC2I CCSGG 2 cut(s) 897, 1654
AsuHPI GGTGA 4 cut(s) 544, 557, 1229, 1823
AsuII TTCGAA 2 cut(s) 1200, 1330
AvaII GGWCC 3 cut(s) 101, 693, 942
BaeGI GKGCMC 1 cut(s) 166
BaeI ACNNNNGTAYC 2 cut(s) 1257, 1290
BamHI GGATCC 1 cut(s) 1606
BanI GGYRCC 1 cut(s) 779
BanII GRGCYC 2 cut(s) 166, 1769
BauI CACGAG 1 cut(s) 128
BbsI GAAGAC 2 cut(s) 1647, 1836
Bbv12I GWGCWC 2 cut(s) 73, 1495
BbvI GCAGC 4 cut(s) 513, 629, 1147, 1303
BccI CCATC 4 cut(s) 865, 1122, 1333, 1690
BceAI ACGGC 1 cut(s) 1723
BciT130I CCWGG 1 cut(s) 777
BciVI GTATCC 1 cut(s) 1022
BcnI CCSGG 2 cut(s) 897, 1654
BcoDI GTCTC 1 cut(s) 1532
BcuI ACTAGT 1 cut(s) 539
BfaI CTAG 1 cut(s) 540
BfmI CTRYAG 2 cut(s) 527, 1161
BfuAI ACCTGC 1 cut(s) 520
BfuI GTATCC 1 cut(s) 1022
BglII AGATCT 3 cut(s) 631, 916, 1788
BisI GCNGC 4 cut(s) 527, 618, 1161, 1317
BlsI GCNGC 4 cut(s) 528, 619, 1162, 1318
Bme1390I CCNGG 3 cut(s) 777, 897, 1654
Bme18I GGWCC 3 cut(s) 101, 693, 942
BmgT120I GGNCC 6 cut(s) 101, 162, 163, 693, 942, 1736
BmiI GGNNCC 7 cut(s) 163, 164, 165, 781, 894, 1260, 1608
BmrFI CCNGG 3 cut(s) 777, 897, 1654
BmrI ACTGGG 1 cut(s) 1654
BmsI GCATC 8 cut(s) 163, 199, 433, 455, 460, 960, 1254, 1741
BmuI ACTGGG 1 cut(s) 1654
BpiI GAAGAC 2 cut(s) 1647, 1836
BpmI CTGGAG 3 cut(s) 153, 926, 1341
Bpu10I CCTNAGC 1 cut(s) 488
Bpu14I TTCGAA 2 cut(s) 1200, 1330
BpuEI CTTGAG 1 cut(s) 1535
BpuMI CCSGG 2 cut(s) 897, 1654
BsaAI YACGTR 1 cut(s) 1033
BsaJI CCNNGG 1 cut(s) 896
Bsc4I CCNNNNNNNGG 1 cut(s) 1025
Bse1I ACTGG 6 cut(s) 343, 825, 909, 1112, 1649, 1697
Bse3DI GCAATG 3 cut(s) 560, 766, 1029
BseBI CCWGG 1 cut(s) 777
BseDI CCNNGG 1 cut(s) 896
BseGI GGATG 5 cut(s) 448, 475, 876, 951, 1701
BseLI CCNNNNNNNGG 1 cut(s) 1025
BseMI GCAATG 3 cut(s) 560, 766, 1029
BseMII CTCAG 2 cut(s) 1450, 1543
BseNI ACTGG 6 cut(s) 343, 825, 909, 1112, 1649, 1697
BseRI GAGGAG 4 cut(s) 28, 1106, 1140, 1410
BseSI GKGCMC 1 cut(s) 166
BseXI GCAGC 4 cut(s) 513, 629, 1147, 1303
BsgI GTGCAG 3 cut(s) 78, 636, 1483
BshFI GGCC 4 cut(s) 164, 966, 1018, 1738
BshNI GGYRCC 1 cut(s) 779
BsiHKAI GWGCWC 2 cut(s) 73, 1495
BsiSI CCGG 2 cut(s) 896, 1653
BslFI GGGAC 1 cut(s) 915
BslI CCNNNNNNNGG 1 cut(s) 1025
BsmAI GTCTC 1 cut(s) 1532
BsmBI CGTCTC 1 cut(s) 1532
BsmFI GGGAC 1 cut(s) 915
BsnI GGCC 4 cut(s) 164, 966, 1018, 1738
Bsp119I TTCGAA 2 cut(s) 1200, 1330
Bsp120I GGGCCC 1 cut(s) 162
Bsp1286I GDGCHC 4 cut(s) 73, 166, 1495, 1769
Bsp1407I TGTACA 2 cut(s) 711, 1305
Bsp143I GATC 7 cut(s) 358, 631, 826, 916, 1120, 1606, 1788
BspACI CCGC 1 cut(s) 985
BspANI GGCC 4 cut(s) 164, 966, 1018, 1738
BspCNI CTCAG 2 cut(s) 1449, 1542
BspLI GGNNCC 7 cut(s) 163, 164, 165, 781, 894, 1260, 1608
BspMAI CTGCAG 2 cut(s) 531, 1165
BspMI ACCTGC 1 cut(s) 520
BspPI GGATC 2 cut(s) 1601, 1614
BspQI GCTCTTC 1 cut(s) 543
BspT104I TTCGAA 2 cut(s) 1200, 1330
BspT107I GGYRCC 1 cut(s) 779
BsrDI GCAATG 3 cut(s) 560, 766, 1029
BsrGI TGTACA 2 cut(s) 711, 1305
BsrI ACTGG 6 cut(s) 343, 825, 909, 1112, 1649, 1697
BssECI CCNNGG 1 cut(s) 896
BssMI GATC 7 cut(s) 358, 631, 826, 916, 1120, 1606, 1788
BssSI CACGAG 1 cut(s) 128
Bst2BI CACGAG 1 cut(s) 128
Bst2UI CCWGG 1 cut(s) 777
Bst4CI ACNGT 5 cut(s) 410, 424, 676, 839, 1811
Bst6I CTCTTC 4 cut(s) 543, 1007, 1158, 1809
BstAUI TGTACA 2 cut(s) 711, 1305
BstBAI YACGTR 1 cut(s) 1033
BstBI TTCGAA 2 cut(s) 1200, 1330
BstC8I GCNNGC 4 cut(s) 1020, 1165, 1466, 1720
BstDEI CTNAG 6 cut(s) 392, 488, 628, 1436, 1529, 1669
BstEII GGTNACC 1 cut(s) 1648
BstF5I GGATG 5 cut(s) 448, 475, 876, 951, 1701
BstKTI GATC 7 cut(s) 361, 634, 829, 919, 1123, 1609, 1791
BstMAI GTCTC 1 cut(s) 1532
BstMBI GATC 7 cut(s) 358, 631, 826, 916, 1120, 1606, 1788
BstMWI GCNNNNNNNGC 2 cut(s) 1349, 1735
BstNI CCWGG 1 cut(s) 777
BstNSI RCATGY 1 cut(s) 1666
BstPI GGTNACC 1 cut(s) 1648
BstSCI CCNGG 3 cut(s) 775, 895, 1652
BstSFI CTRYAG 2 cut(s) 527, 1161
BstSLI GKGCMC 1 cut(s) 166
BstV1I GCAGC 4 cut(s) 513, 629, 1147, 1303
BstV2I GAAGAC 2 cut(s) 1647, 1836
BstX2I RGATCY 4 cut(s) 631, 916, 1606, 1788
BstYI RGATCY 4 cut(s) 631, 916, 1606, 1788
BsuI GTATCC 1 cut(s) 1022
BsuRI GGCC 4 cut(s) 164, 966, 1018, 1738
BtsCI GGATG 5 cut(s) 448, 475, 876, 951, 1701
BtsI GCAGTG 2 cut(s) 183, 1145
BtsIMutI CAGTG 5 cut(s) 183, 368, 835, 1145, 1537
BveI ACCTGC 1 cut(s) 520
Cac8I GCNNGC 4 cut(s) 1020, 1165, 1466, 1720
Cfr13I GGNCC 6 cut(s) 101, 162, 163, 693, 942, 1736
CseI GACGC 1 cut(s) 1508
CsiI ACCWGGT 1 cut(s) 775
Csp6I GTAC 4 cut(s) 406, 712, 1096, 1306
CviAII CATG 9 cut(s) 254, 327, 612, 948, 1099, 1157, 1214, 1633, 1663
CviJI RGCY 9 cut(s) 164, 620, 966, 1018, 1167, 1297, 1352, 1738, 1767
CviKI_1 RGCY 9 cut(s) 164, 620, 966, 1018, 1167, 1297, 1352, 1738, 1767
CviQI GTAC 4 cut(s) 406, 712, 1096, 1306
DdeI CTNAG 6 cut(s) 392, 488, 628, 1436, 1529, 1669
DpnI GATC 7 cut(s) 360, 633, 828, 918, 1122, 1608, 1790
DpnII GATC 7 cut(s) 358, 631, 826, 916, 1120, 1606, 1788
Eam1104I CTCTTC 4 cut(s) 543, 1007, 1158, 1809
EarI CTCTTC 4 cut(s) 543, 1007, 1158, 1809
Eco147I AGGCCT 1 cut(s) 1018
Eco24I GRGCYC 2 cut(s) 166, 1769
Eco32I GATATC 1 cut(s) 1222
Eco47I GGWCC 3 cut(s) 101, 693, 942
Eco57I CTGAAG 2 cut(s) 204, 435
Eco91I GGTNACC 1 cut(s) 1648
EcoO109I RGGNCCY 3 cut(s) 101, 162, 163
EcoO65I GGTNACC 1 cut(s) 1648
EcoRI GAATTC 2 cut(s) 280, 1431
EcoRII CCWGG 1 cut(s) 775
EcoRV GATATC 1 cut(s) 1222
EcoT22I ATGCAT 3 cut(s) 448, 953, 1215
EcoT38I GRGCYC 2 cut(s) 166, 1769
Esp3I CGTCTC 1 cut(s) 1532
FaeI CATG 9 cut(s) 257, 330, 615, 951, 1102, 1160, 1217, 1636, 1666
FalI AAGNNNNNCTT 2 cut(s) 736, 768
FaqI GGGAC 1 cut(s) 915
FatI CATG 9 cut(s) 253, 326, 611, 947, 1098, 1156, 1213, 1632, 1662
FauI CCCGC 1 cut(s) 978
FauNDI CATATG 2 cut(s) 1233, 1390
FblI GTMKAC 1 cut(s) 749
Fnu4HI GCNGC 4 cut(s) 527, 618, 1161, 1317
FokI GGATG 5 cut(s) 455, 482, 883, 938, 1708
FriOI GRGCYC 2 cut(s) 166, 1769
Fsp4HI GCNGC 4 cut(s) 527, 618, 1161, 1317
FspBI CTAG 1 cut(s) 540
GluI GCNGC 4 cut(s) 527, 618, 1161, 1317
GsuI CTGGAG 3 cut(s) 153, 926, 1341
HaeIII GGCC 4 cut(s) 164, 966, 1018, 1738
HapII CCGG 2 cut(s) 896, 1653
HgaI GACGC 1 cut(s) 1508
Hin1II CATG 9 cut(s) 257, 330, 615, 951, 1102, 1160, 1217, 1636, 1666
HincII GTYRAC 3 cut(s) 579, 1386, 1523
HindII GTYRAC 3 cut(s) 579, 1386, 1523
HinfI GANTC 6 cut(s) 374, 434, 607, 875, 1477, 1706
HpaII CCGG 2 cut(s) 896, 1653
HphI GGTGA 4 cut(s) 544, 557, 1229, 1823
Hpy188I TCNGA 4 cut(s) 451, 469, 743, 1430
Hpy188III TCNNGA 7 cut(s) 128, 170, 413, 955, 1084, 1249, 1262
HpyAV CCTTC 8 cut(s) 21, 135, 410, 567, 738, 1196, 1326, 1651
HpyCH4III ACNGT 5 cut(s) 410, 424, 676, 839, 1811
HpyCH4IV ACGT 2 cut(s) 1032, 1525
HpyF10VI GCNNNNNNNGC 2 cut(s) 1349, 1735
HpyF3I CTNAG 6 cut(s) 392, 488, 628, 1436, 1529, 1669
HpySE526I ACGT 2 cut(s) 1032, 1525
Hsp92II CATG 9 cut(s) 257, 330, 615, 951, 1102, 1160, 1217, 1636, 1666
Kzo9I GATC 7 cut(s) 358, 631, 826, 916, 1120, 1606, 1788
LguI GCTCTTC 1 cut(s) 543
Lsp1109I GCAGC 4 cut(s) 513, 629, 1147, 1303
LweI GCATC 8 cut(s) 163, 199, 433, 455, 460, 960, 1254, 1741
MabI ACCWGGT 1 cut(s) 775
MaeI CTAG 1 cut(s) 540
MaeII ACGT 2 cut(s) 1032, 1525
MaeIII GTNAC 4 cut(s) 653, 853, 1532, 1648
MalI GATC 7 cut(s) 360, 633, 828, 918, 1122, 1608, 1790
MboI GATC 7 cut(s) 358, 631, 826, 916, 1120, 1606, 1788
MfeI CAATTG 2 cut(s) 135, 213
MflI RGATCY 4 cut(s) 631, 916, 1606, 1788
MhlI GDGCHC 4 cut(s) 73, 166, 1495, 1769
MlyI GAGTC 3 cut(s) 383, 601, 869
MmeI TCCRAC 3 cut(s) 220, 248, 490
Mph1103I ATGCAT 3 cut(s) 448, 953, 1215
MseI TTAA 2 cut(s) 1068, 1176
MslI CAYNNNNRTG 2 cut(s) 865, 1631
MspI CCGG 2 cut(s) 896, 1653
MspR9I CCNGG 3 cut(s) 777, 897, 1654
MunI CAATTG 2 cut(s) 135, 213
MvaI CCWGG 1 cut(s) 777
MwoI GCNNNNNNNGC 2 cut(s) 1349, 1735
NciI CCSGG 2 cut(s) 897, 1654
NdeI CATATG 2 cut(s) 1233, 1390
NdeII GATC 7 cut(s) 358, 631, 826, 916, 1120, 1606, 1788
NlaIII CATG 9 cut(s) 257, 330, 615, 951, 1102, 1160, 1217, 1636, 1666
NlaIV GGNNCC 7 cut(s) 163, 164, 165, 781, 894, 1260, 1608
NmuCI GTSAC 1 cut(s) 1532
NsiI ATGCAT 3 cut(s) 448, 953, 1215
NspI RCATGY 1 cut(s) 1666
NspV TTCGAA 2 cut(s) 1200, 1330
OliI CACNNNNGTG 1 cut(s) 865
PaqCI CACCTGC 1 cut(s) 520
PceI AGGCCT 1 cut(s) 1018
PciI ACATGT 1 cut(s) 1662
PciSI GCTCTTC 1 cut(s) 543
PfeI GAWTC 3 cut(s) 434, 1477, 1706
PflFI GACNNNGTC 1 cut(s) 1538
PkrI GCNGC 4 cut(s) 528, 619, 1162, 1318
PleI GAGTC 3 cut(s) 382, 601, 869
PpsI GAGTC 3 cut(s) 382, 601, 869
Ppu21I YACGTR 1 cut(s) 1033
PpuMI RGGWCCY 1 cut(s) 101
PscI ACATGT 1 cut(s) 1662
PsiI TTATAA 1 cut(s) 458
Psp5II RGGWCCY 1 cut(s) 101
Psp6I CCWGG 1 cut(s) 775
PspEI GGTNACC 1 cut(s) 1648
PspGI CCWGG 1 cut(s) 775
PspN4I GGNNCC 7 cut(s) 163, 164, 165, 781, 894, 1260, 1608
PspOMI GGGCCC 1 cut(s) 162
PspPI GGNCC 6 cut(s) 101, 162, 163, 693, 942, 1736
PspPPI RGGWCCY 1 cut(s) 101
PstI CTGCAG 2 cut(s) 531, 1165
PsuI RGATCY 4 cut(s) 631, 916, 1606, 1788
PsyI GACNNNGTC 1 cut(s) 1538
RsaI GTAC 4 cut(s) 407, 713, 1097, 1307
RsaNI GTAC 4 cut(s) 406, 712, 1096, 1306
RseI CAYNNNNRTG 2 cut(s) 865, 1631
SapI GCTCTTC 1 cut(s) 543
SaqAI TTAA 2 cut(s) 1068, 1176
SatI GCNGC 4 cut(s) 527, 618, 1161, 1317
Sau3AI GATC 7 cut(s) 358, 631, 826, 916, 1120, 1606, 1788
Sau96I GGNCC 6 cut(s) 101, 162, 163, 693, 942, 1736
SchI GAGTC 3 cut(s) 383, 601, 869
ScrFI CCNGG 3 cut(s) 777, 897, 1654
SduI GDGCHC 4 cut(s) 73, 166, 1495, 1769
SexAI ACCWGGT 1 cut(s) 775
SfaNI GCATC 8 cut(s) 163, 199, 433, 455, 460, 960, 1254, 1741
SfcI CTRYAG 2 cut(s) 527, 1161
SfuI TTCGAA 2 cut(s) 1200, 1330
SinI GGWCC 3 cut(s) 101, 693, 942
SmiMI CAYNNNNRTG 2 cut(s) 865, 1631
SmlI CTYRAG 1 cut(s) 1514
SmoI CTYRAG 1 cut(s) 1514
SpeI ACTAGT 1 cut(s) 539
SseBI AGGCCT 1 cut(s) 1018
SsiI CCGC 1 cut(s) 985
SspI AATATT 2 cut(s) 307, 1188
SspMI CTAG 1 cut(s) 540
StuI AGGCCT 1 cut(s) 1018
StyD4I CCNGG 3 cut(s) 775, 895, 1652
TaaI ACNGT 5 cut(s) 410, 424, 676, 839, 1811
TaiI ACGT 2 cut(s) 1035, 1528
TaqI TCGA 8 cut(s) 357, 642, 1200, 1248, 1330, 1454, 1689, 1704
TatI WGTACW 4 cut(s) 405, 711, 1095, 1305
TfiI GAWTC 3 cut(s) 434, 1477, 1706
Tru1I TTAA 2 cut(s) 1068, 1176
Tru9I TTAA 2 cut(s) 1068, 1176
TscAI CASTG 5 cut(s) 183, 368, 842, 1145, 1537
TseFI GTSAC 1 cut(s) 1532
TseI GCWGC 4 cut(s) 526, 617, 1160, 1316
Tsp45I GTSAC 1 cut(s) 1532
TspDTI ATGAA 2 cut(s) 453, 1145
TspGWI ACGGA 1 cut(s) 1652
TspRI CASTG 5 cut(s) 183, 368, 842, 1145, 1537
Tth111I GACNNNGTC 1 cut(s) 1538
VpaK11BI GGWCC 3 cut(s) 101, 693, 942
XapI RAATTY 5 cut(s) 280, 460, 1300, 1408, 1431
XceI RCATGY 1 cut(s) 1666
XmiI GTMKAC 1 cut(s) 749
XspI CTAG 1 cut(s) 540
Zsp2I ATGCAT 3 cut(s) 448, 953, 1215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.