MD17G1128400.v1.1

Protein of unknown function (DUF 659)

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
11274144 .. 11278302
4159 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1128400.v1.1.491

Sequence Viewer

Length: 2766 bp
ATGATATCTTTAGAGGGTTTTGAGCCCGTAGCTGTTTCTCCCCAGAAACAAGACCCGGCATGGAAACACTGCCAACTTTTCATGAAAGACCAACCCAATGGGGGTAAAGTTGAGTTGAAAAAGTGTATATATTGTGGCAAATTGTTTCAGGGTGGTGGGATTAATCGCCTTAAATCCCACCTTGCCGGTCGGAAGGGCAATGGCCCCACCTGTGATCATGCCCCGCCCGATGTTAGAATCGTAATGTTGCAGAGTTTGAATGATGGGATTGCAGCGTTTAGGCAGAGGAAGAGTCATATTGTTGCTAACCCACATTGTAGCATTAGCGAAGTTGACGGTTCATTAGGCGAAAATGGAGAGTATAAATTGGTTGTAGGACCCGATTCGAATGCGCTGGTGAATGATGAGGAGGTTGGTGGGTTGAGTGGGAATGGAGGAATTAGGTTAACTGATAATTTGACTAATGTGCCCCTTCAAGTAGATAATTCTTATAGGAGTAATGCTCAGCAGGGATTAATTGGAGAGGCCAAATTGTATTTTTCGGTAGATGAAGAGGAAGATGGTGGGACGAGTGTTGATCGAGGAGTACGGCGGAGGGGTAGACCTTCTGGTGGTGCTACCGGTTCTGGTTCAGTTAATGGCGTTACGAAATTTAGTGTTTCCGCTCCTTTTCCTATTTCAGTAGGCAATGCTTTTCCCAATTCAACTTTTTCACAAAACCAAGAAGAAGTTGGCATCAAACTGAATTTTTCTTTAGATCAGGAAGAAGATGTTGGATTGAGTGTTGATAGAAGAGTAAGGCGGAGGGGTACACCTTGTAAAGAAGCTACTGGTTCTGGTTCAGTTAATGGTGTTACGAAATTGAGTAATGCTTCACCTCCTGTTCCTATTGCAATAGGTAATGCTTTTCCCAATTCAAATTTGTTGGAAAATAAAGAAGTTGGCATAAGTAATACAAATGTGAGTGGGAAGAGGGTAAGGGATGAAGATGCTTCGGGGGCTGCCAATGATGGAACCATAGGCAATGATTACGAGGTAACAAGGTTGAGCATTGAACAGATTCATATGGCAATTGGTCGGTTTTTATATGAAATTCAGGCTCCCCTGGATGCAGTAAAGAACTCTGTTTATTTCCAGCCAATGATTGACGCAATTGCCTCTGGGGGAAAGGGGACTGTAGCACCCTCATATGATAACATTCGGGGTTGGATGTTGAAGAATGCAGTTGAAGAGGTGAAGAGTGAAATTCAACAACACACGGAAACATGGGTGAGGACGGGTTGTTCTCTTCTAGTCAACCAATGGAATTCTGAAAAGGGTAGAACTTTGCTAAATTTTGCAGTGTACTGTCCTGAAGGAACAATCTATTTGAAATCTGTGGATGCTTCTTATTTTGTTTTTTCTCCAGATGCTTTGTTTGTATTTTTTAAGGAAGTGGTGGAAGAAATTGGAGTTGGACATGTTTTGCAAGTCATTACAAATACTGAAGAGCAATTTTCTGTTGTTGGGAAGAAGTTGATGGATACGTTCCCTACTCTGTACTGGTCTCCCTGTTCCACCGCTTGCATAGGTTCCATCCTTGAGGATTTTGGAAAAGTTGAATGGATAAATTCTGTAATTGAACAGGCTAGATCTGTTACAAGATTTATCTACAAACATGTTGTCATTTTGAACATGATGAGAAGGTATACATTTGGGAATGACATTGTTAGGCTGGGAGTAACTAGGTTTGCGACAAACTTTATGGCATTGAAACAAATGGCTGACCTTCAATATAATTTGCAGTCAATGGTTACTTCAAACGAGTGGATGGACTGCCCCTATTCTAAAACACCAGAAGGATCGGCAGTGTTAGATATACTAAGTAATCATTCATTTTGGTCTTCGTGCATTTTGATCACCCGTTTGACTAATCCACTCTTGCGAGTTTTGAGAATTGTTGGTAGCCAGAAGAGGCCAGCGATGGGATATGTTTTTGCAGGGATGTATCGAGCAAAAGAAACAATCAAAAGAGAACTTGTCAAGAAAGAAGAATATATGGTGTACTGGAACATTATAGATCACAGATGGAAAAAAATAGTGGATTTTCCCCTTCATGCTGCAGGATTTTACCTTAATCCCAAGTTCTTTTACAGCTTCAATGGAGACATGCATAATGAAATTGTGTCGAGGATGTTTGACTGCGTAGAGAGATTGGTTCCTGATATAAAAGTCCAAGATGAAGTAATCAAAGAGATAAACTTGTACAAAAAAGCTTTTGGAGATTTGGGGAGGAATTTGGCAGTCCGAGCGAGGGACAATCTGCTTCCTGCTGAATGGTGGTCAACATATGGTGGTGGTTGCCCAAACCTGTCGCGCTTGGCAATTCGTATTCTCAGTCAAACTTGCAGCTTAGTTCAGTGTCAGGAGAATCAGAGTCCCTTCGAACAGTTGCATAAGACAAGGAACAGCTTAGAACATCAGCGGCTTAATGATCTTGTTTTTGTTCAATACAACTTCAAACTAAAACAGAAGGTTCATAAGCACAAAGAACAGGAGTACACGGATCCTACATCATTTGACCATGACAGCATTGCCGAAGACTGGGTAGCAGAGATGGAGATGCACCAAGAAGACATTGAAAATCCTGATTGGAGGTCACTTGATCCCCCCTCTGAGAACTCGAGGCTTTTAGAACTTTCGGTTGATGAAGTAGAAGAATTGGGTTCAGGGTTTGATGACAATGAAATTTTGAACGGATTGAAAATGGTCAAAGAAGAATGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

922

Amino Acids

102.99

Weight (kDa)

5.7

Isoelectric Point (pI)

41.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF659 PF04937 395 - 546 6.4e-53 Domain of unknown function (DUF659)
Dimer_Tnp_hAT PF05699 747 - 832 1e-11 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000444)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22220 AT3G22220 AT3G22220 AT3G22220 AT4G15020 AT4G15020
fragaria_vesca FvH4_6g39601 FvH4_6g39601 FvH4_6g39601 FvH4_6g39601 FvH4_6g39601 FvH4_7g22891 FvH4_7g22891 FvH4_7g22891
malus_domestica MD01G1137200.v1.1 MD02G1265900.v1.1 MD07G1202100.v1.1 MD09G1137900.v1.1 MD09G1138100.v1.1 MD17G1128400.v1.1
prunus_persica Prupe.2G058600_v2.0.a1 Prupe.2G058600_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1
pyrus_communis pycom01g15800 pycom01g15810 pycom01g15840 pycom02g22730 pycom07g18920 pycom07g18930 pycom09g05900 pycom17g12060
rosa_chinensis RchiOBHm_Chr1g0368051 RchiOBHm_Chr2g0153631 RchiOBHm_Chr2g0153641 RchiOBHm_Chr7g0237231
rosa_laevigata RLG00000001022 RLG00000020718
rosa_multiflora Rmu_sc0002117.1_g000006 Rmu_sc0004952.1_g000008 Rmu_sc0005823.1_g000001 Rmu_sc0013273.1_g000001 Rmu_sc0028071.1_g000001
rosa_roxburghii Rroxscaffold_1G00016080 Rroxscaffold_2G00094830 Rroxscaffold_4G00288900
rosa_rugosa Rorug01G0338600 Rorug01G0338700 Rorug02G0441100 Rorug02G0441200 Rorug04G0167900 Rorug07G0273200 Rorug07G0273300 Rorug07G0297100 Rorug07G0297200 Rorug07G0297300
rosa_samantha Rh1AG102500 Rh1AG102600 Rh1AG102700 Rh1AG345600 Rh1BG307900 Rh1CG323500 Rh1DG340000 Rh2AG504100 Rh2BG514800 Rh2CG490100 Rh2DG526900 Rh7AG451500 Rh7AG451700 Rh7AG459100 Rh7AG459200 Rh7BG400700 Rh7BG400800 Rh7BG421300 Rh7BG421400 Rh7BG423400 Rh7BG423500 Rh7BG423800 Rh7BG423900 Rh7CG471000 Rh7CG471100 Rh7CG471200
rosa_wichuraiana Rw1G030760 Rw2G041430 Rw5G036050 Rw7G038020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 665
AccI GTMKAC 2 cut(s) 601, 1688
AccII CGCG 1 cut(s) 2356
AciI CCGC 6 cut(s) 224, 592, 663, 802, 1560, 2464
AclWI GGATC 4 cut(s) 1849, 2540, 2553, 2639
AcuI CTGAAG 2 cut(s) 1374, 1506
AfaI GTAC 7 cut(s) 588, 811, 1346, 1541, 2045, 2246, 2540
AfiI CCNNNNNNNGG 5 cut(s) 101, 611, 1964, 2293, 2583
AflIII ACRYGT 2 cut(s) 1459, 1657
AgeI ACCGGT 1 cut(s) 620
AjnI CCWGG 1 cut(s) 1104
AjuI GAANNNNNNNTTGG 4 cut(s) 756, 788, 1437, 1469
AloI GAACNNNNNNTCC 2 cut(s) 1267, 1299
AluBI AGCT 6 cut(s) 32, 827, 2136, 2255, 2391, 2451
AluI AGCT 6 cut(s) 32, 827, 2136, 2255, 2391, 2451
Alw26I GTCTC 2 cut(s) 1551, 2139
AlwI GGATC 4 cut(s) 1849, 2540, 2553, 2639
Ama87I CYCGRG 1 cut(s) 2662
AoxI GGCC 3 cut(s) 202, 525, 1955
ApeKI GCWGC 4 cut(s) 272, 1001, 2099, 2388
ArsI GACNNNNNNTTYG 2 cut(s) 1647, 1679
AseI ATTAAT 2 cut(s) 162, 515
AsiGI ACCGGT 1 cut(s) 620
Asp700I GAANNNNTTC 1 cut(s) 1059
AspLEI GCGC 2 cut(s) 394, 2358
AspS9I GGNCC 2 cut(s) 203, 377
AsuC2I CCSGG 1 cut(s) 56
AsuHPI GGTGA 5 cut(s) 409, 867, 1246, 1282, 1891
AsuII TTCGAA 2 cut(s) 386, 2424
AvaI CYCGRG 1 cut(s) 2662
AvaII GGWCC 1 cut(s) 377
BaeGI GKGCMC 1 cut(s) 471
BamHI GGATCC 1 cut(s) 2545
BanII GRGCYC 1 cut(s) 27
BbsI GAAGAC 3 cut(s) 1875, 2586, 2619
BbvI GCAGC 4 cut(s) 284, 988, 2086, 2400
BccI CCATC 9 cut(s) 257, 554, 1004, 1513, 1583, 1804, 1957, 2061, 2590
BceAI ACGGC 1 cut(s) 605
BcgI CGANNNNNNTGC 2 cut(s) 371, 405
BciT130I CCWGG 1 cut(s) 1106
BciVI GTATCC 1 cut(s) 1516
BclI TGATCA 2 cut(s) 214, 1896
BcnI CCSGG 1 cut(s) 56
BcoDI GTCTC 2 cut(s) 1551, 2139
BfaI CTAG 3 cut(s) 1292, 1629, 1725
BfmI CTRYAG 2 cut(s) 1176, 2100
BfuI GTATCC 1 cut(s) 1516
BglII AGATCT 1 cut(s) 1631
BisI GCNGC 5 cut(s) 273, 1002, 2100, 2389, 2465
BlpI GCTNAGC 1 cut(s) 504
BlsI GCNGC 5 cut(s) 274, 1003, 2101, 2390, 2466
Bme1390I CCNGG 2 cut(s) 56, 1106
Bme18I GGWCC 1 cut(s) 377
BmeT110I CYCGRG 1 cut(s) 2662
BmgT120I GGNCC 2 cut(s) 203, 377
BmiI GGNNCC 7 cut(s) 205, 379, 1015, 1101, 1573, 2199, 2547
BmrFI CCNGG 2 cut(s) 56, 1106
BmrI ACTGGG 1 cut(s) 2593
BmsI GCATC 6 cut(s) 744, 979, 1099, 1372, 1399, 2592
BmuI ACTGGG 1 cut(s) 2593
BpiI GAAGAC 3 cut(s) 1875, 2586, 2619
BplI GAGNNNNNCTC 2 cut(s) 487, 519
BpmI CTGGAG 1 cut(s) 1389
Bpu1102I GCTNAGC 1 cut(s) 504
Bpu14I TTCGAA 2 cut(s) 386, 2424
BpuEI CTTGAG 1 cut(s) 1601
BpuMI CCSGG 1 cut(s) 56
BsaI GGTCTC 1 cut(s) 1551
BsaJI CCNNGG 1 cut(s) 1104
BsaWI WCCGGW 1 cut(s) 620
Bsc4I CCNNNNNNNGG 5 cut(s) 101, 611, 1964, 2293, 2583
Bse118I RCCGGY 2 cut(s) 185, 620
Bse1I ACTGG 4 cut(s) 835, 1547, 2051, 2588
Bse3DI GCAATG 4 cut(s) 205, 694, 1030, 2571
BseBI CCWGG 1 cut(s) 1106
BseDI CCNNGG 1 cut(s) 1104
BseGI GGATG 8 cut(s) 988, 1114, 1215, 1387, 1575, 1815, 1989, 2178
BseLI CCNNNNNNNGG 5 cut(s) 101, 611, 1964, 2293, 2583
BseMI GCAATG 4 cut(s) 205, 694, 1030, 2571
BseMII CTCAG 3 cut(s) 518, 2389, 2646
BseNI ACTGG 4 cut(s) 835, 1547, 2051, 2588
BseRI GAGGAG 2 cut(s) 422, 597
BseSI GKGCMC 1 cut(s) 471
BseXI GCAGC 4 cut(s) 284, 988, 2086, 2400
BseYI CCCAGC 1 cut(s) 1714
Bsh1236I CGCG 1 cut(s) 2356
Bsh1285I CGRYCG 1 cut(s) 190
BshFI GGCC 3 cut(s) 204, 527, 1957
BshTI ACCGGT 1 cut(s) 620
BsiEI CGRYCG 1 cut(s) 190
BsiHKCI CYCGRG 1 cut(s) 2662
BsiSI CCGG 3 cut(s) 56, 186, 621
BslFI GGGAC 4 cut(s) 580, 1186, 2309, 2403
BslI CCNNNNNNNGG 5 cut(s) 101, 611, 1964, 2293, 2583
BsmAI GTCTC 2 cut(s) 1551, 2139
BsmFI GGGAC 4 cut(s) 580, 1186, 2309, 2403
BsmI GAATGC 2 cut(s) 394, 1225
BsnI GGCC 3 cut(s) 204, 527, 1957
Bso31I GGTCTC 1 cut(s) 1551
BsoBI CYCGRG 1 cut(s) 2662
Bsp119I TTCGAA 2 cut(s) 386, 2424
Bsp1286I GDGCHC 2 cut(s) 27, 471
Bsp1407I TGTACA 1 cut(s) 2244
Bsp1720I GCTNAGC 1 cut(s) 504
BspACI CCGC 6 cut(s) 224, 592, 663, 802, 1560, 2464
BspANI GGCC 3 cut(s) 204, 527, 1957
BspCNI CTCAG 3 cut(s) 517, 2388, 2647
BspFNI CGCG 1 cut(s) 2356
BspHI TCATGA 1 cut(s) 81
BspLI GGNNCC 7 cut(s) 205, 379, 1015, 1101, 1573, 2199, 2547
BspMAI CTGCAG 1 cut(s) 2104
BspPI GGATC 4 cut(s) 1849, 2540, 2553, 2639
BspQI GCTCTTC 1 cut(s) 1482
BspT104I TTCGAA 2 cut(s) 386, 2424
BspTNI GGTCTC 1 cut(s) 1551
BsrBI CCGCTC 1 cut(s) 665
BsrDI GCAATG 4 cut(s) 205, 694, 1030, 2571
BsrFI RCCGGY 2 cut(s) 185, 620
BsrGI TGTACA 1 cut(s) 2244
BsrI ACTGG 4 cut(s) 835, 1547, 2051, 2588
BssAI RCCGGY 2 cut(s) 185, 620
BssECI CCNNGG 1 cut(s) 1104
BssNAI GTATAC 1 cut(s) 1689
Bst1107I GTATAC 1 cut(s) 1689
Bst2UI CCWGG 1 cut(s) 1106
Bst4CI ACNGT 4 cut(s) 338, 1177, 1349, 2430
Bst6I CTCTTC 9 cut(s) 284, 546, 787, 965, 1224, 1232, 1293, 1482, 1946
BstAUI TGTACA 1 cut(s) 2244
BstBI TTCGAA 2 cut(s) 386, 2424
BstC8I GCNNGC 2 cut(s) 1564, 1959
BstDEI CTNAG 6 cut(s) 504, 1862, 2375, 2392, 2452, 2655
BstF5I GGATG 8 cut(s) 988, 1114, 1215, 1387, 1575, 1815, 1989, 2178
BstFNI CGCG 1 cut(s) 2356
BstHHI GCGC 2 cut(s) 394, 2358
BstMAI GTCTC 2 cut(s) 1551, 2139
BstMCI CGRYCG 1 cut(s) 190
BstMWI GCNNNNNNNGC 2 cut(s) 998, 2288
BstNI CCWGG 1 cut(s) 1106
BstNSI RCATGY 3 cut(s) 1463, 1661, 2152
BstSCI CCNGG 2 cut(s) 54, 1104
BstSFI CTRYAG 2 cut(s) 1176, 2100
BstSLI GKGCMC 1 cut(s) 471
BstUI CGCG 1 cut(s) 2356
BstV1I GCAGC 4 cut(s) 284, 988, 2086, 2400
BstV2I GAAGAC 3 cut(s) 1875, 2586, 2619
BstX2I RGATCY 2 cut(s) 1631, 2545
BstXI CCANNNNNNTGG 1 cut(s) 98
BstYI RGATCY 2 cut(s) 1631, 2545
BstZ17I GTATAC 1 cut(s) 1689
BsuI GTATCC 1 cut(s) 1516
BsuRI GGCC 3 cut(s) 204, 527, 1957
BtgZI GCGATG 1 cut(s) 1976
BtsCI GGATG 8 cut(s) 988, 1114, 1215, 1387, 1575, 1815, 1989, 2178
BtsI GCAGTG 3 cut(s) 67, 1347, 1854
BtsIMutI CAGTG 4 cut(s) 67, 1347, 1854, 2405
Cac8I GCNNGC 2 cut(s) 1564, 1959
CciI TCATGA 1 cut(s) 81
CfoI GCGC 2 cut(s) 394, 2358
Cfr10I RCCGGY 2 cut(s) 185, 620
Cfr13I GGNCC 2 cut(s) 203, 377
CseI GACGC 1 cut(s) 1157
Csp6I GTAC 7 cut(s) 587, 810, 1345, 1540, 2044, 2245, 2539
CspAI ACCGGT 1 cut(s) 620
CviQI GTAC 7 cut(s) 587, 810, 1345, 1540, 2044, 2245, 2539
DdeI CTNAG 6 cut(s) 504, 1862, 2375, 2392, 2452, 2655
Eam1104I CTCTTC 9 cut(s) 284, 546, 787, 965, 1224, 1232, 1293, 1482, 1946
EarI CTCTTC 9 cut(s) 284, 546, 787, 965, 1224, 1232, 1293, 1482, 1946
EciI GGCGGA 2 cut(s) 607, 817
Eco24I GRGCYC 1 cut(s) 27
Eco31I GGTCTC 1 cut(s) 1551
Eco32I GATATC 1 cut(s) 6
Eco47I GGWCC 1 cut(s) 377
Eco57I CTGAAG 2 cut(s) 1374, 1506
Eco88I CYCGRG 1 cut(s) 2662
EcoO109I RGGNCCY 1 cut(s) 377
EcoRI GAATTC 1 cut(s) 1306
EcoRII CCWGG 1 cut(s) 1104
EcoRV GATATC 1 cut(s) 6
EcoT22I ATGCAT 1 cut(s) 2154
EcoT38I GRGCYC 1 cut(s) 27
FaqI GGGAC 4 cut(s) 580, 1186, 2309, 2403
FauI CCCGC 1 cut(s) 231
FauNDI CATATG 3 cut(s) 1065, 1189, 2329
FbaI TGATCA 2 cut(s) 214, 1896
FblI GTMKAC 2 cut(s) 601, 1688
Fnu4HI GCNGC 5 cut(s) 273, 1002, 2100, 2389, 2465
FokI GGATG 8 cut(s) 995, 1121, 1222, 1394, 1562, 1822, 1996, 2185
FriOI GRGCYC 1 cut(s) 27
Fsp4HI GCNGC 5 cut(s) 273, 1002, 2100, 2389, 2465
FspBI CTAG 3 cut(s) 1292, 1629, 1725
GlaI GCGC 2 cut(s) 393, 2357
GluI GCNGC 5 cut(s) 273, 1002, 2100, 2389, 2465
GsaI CCCAGC 1 cut(s) 1718
GsuI CTGGAG 1 cut(s) 1389
HaeIII GGCC 3 cut(s) 204, 527, 1957
HapII CCGG 3 cut(s) 56, 186, 621
HgaI GACGC 1 cut(s) 1157
HhaI GCGC 2 cut(s) 394, 2358
Hin6I GCGC 2 cut(s) 392, 2356
HinP1I GCGC 2 cut(s) 392, 2356
HincII GTYRAC 4 cut(s) 334, 447, 1297, 2325
HindII GTYRAC 4 cut(s) 334, 447, 1297, 2325
HindIII AAGCTT 1 cut(s) 2253
HinfI GANTC 6 cut(s) 237, 292, 383, 1060, 2410, 2416
HpaI GTTAAC 1 cut(s) 447
HpaII CCGG 3 cut(s) 56, 186, 621
HphI GGTGA 5 cut(s) 409, 867, 1246, 1282, 1891
Hpy188I TCNGA 5 cut(s) 192, 1312, 2288, 2415, 2656
Hpy188III TCNNGA 8 cut(s) 82, 761, 1352, 1406, 2023, 2201, 2405, 2627
HpyCH4III ACNGT 4 cut(s) 338, 1177, 1349, 2430
HpyCH4IV ACGT 1 cut(s) 1526
HpyF10VI GCNNNNNNNGC 2 cut(s) 998, 2288
HpyF3I CTNAG 6 cut(s) 504, 1862, 2375, 2392, 2452, 2655
HpySE526I ACGT 1 cut(s) 1526
HspAI GCGC 2 cut(s) 392, 2356
Ksp22I TGATCA 2 cut(s) 214, 1896
KspAI GTTAAC 1 cut(s) 447
LguI GCTCTTC 1 cut(s) 1482
LmnI GCTCC 2 cut(s) 670, 1105
Lsp1109I GCAGC 4 cut(s) 284, 988, 2086, 2400
LweI GCATC 6 cut(s) 744, 979, 1099, 1372, 1399, 2592
MaeI CTAG 3 cut(s) 1292, 1629, 1725
MaeII ACGT 1 cut(s) 1526
MaeIII GTNAC 7 cut(s) 643, 853, 1036, 1636, 1720, 1792, 2637
MbiI CCGCTC 1 cut(s) 665
MfeI CAATTG 2 cut(s) 1071, 1152
MflI RGATCY 2 cut(s) 1631, 2545
MhlI GDGCHC 2 cut(s) 27, 471
MlyI GAGTC 2 cut(s) 301, 2425
MmeI TCCRAC 5 cut(s) 170, 754, 906, 1187, 1435
Mph1103I ATGCAT 1 cut(s) 2154
MroXI GAANNNNTTC 1 cut(s) 1059
MspA1I CMGCKG 1 cut(s) 2464
MspI CCGG 3 cut(s) 56, 186, 621
MspR9I CCNGG 2 cut(s) 56, 1106
MunI CAATTG 2 cut(s) 1071, 1152
Mva1269I GAATGC 2 cut(s) 394, 1225
MvaI CCWGG 1 cut(s) 1106
MvnI CGCG 1 cut(s) 2356
MwoI GCNNNNNNNGC 2 cut(s) 998, 2288
NciI CCSGG 1 cut(s) 56
NdeI CATATG 3 cut(s) 1065, 1189, 2329
NlaIV GGNNCC 7 cut(s) 205, 379, 1015, 1101, 1573, 2199, 2547
NmuCI GTSAC 1 cut(s) 2637
NsiI ATGCAT 1 cut(s) 2154
NspI RCATGY 3 cut(s) 1463, 1661, 2152
NspV TTCGAA 2 cut(s) 386, 2424
PaeR7I CTCGAG 1 cut(s) 2662
PagI TCATGA 1 cut(s) 81
PciI ACATGT 2 cut(s) 1459, 1657
PciSI GCTCTTC 1 cut(s) 1482
PctI GAATGC 2 cut(s) 394, 1225
PdmI GAANNNNTTC 1 cut(s) 1059
PfeI GAWTC 4 cut(s) 237, 383, 1060, 2410
PinAI ACCGGT 1 cut(s) 620
PkrI GCNGC 5 cut(s) 274, 1003, 2101, 2390, 2466
PleI GAGTC 2 cut(s) 300, 2424
PpsI GAGTC 2 cut(s) 300, 2424
PpuMI RGGWCCY 1 cut(s) 377
PscI ACATGT 2 cut(s) 1459, 1657
PshBI ATTAAT 2 cut(s) 162, 515
Psp5II RGGWCCY 1 cut(s) 377
Psp6I CCWGG 1 cut(s) 1104
PspFI CCCAGC 1 cut(s) 1714
PspGI CCWGG 1 cut(s) 1104
PspN4I GGNNCC 7 cut(s) 205, 379, 1015, 1101, 1573, 2199, 2547
PspPI GGNCC 2 cut(s) 203, 377
PspPPI RGGWCCY 1 cut(s) 377
PspXI VCTCGAGB 1 cut(s) 2662
PstI CTGCAG 1 cut(s) 2104
PsuI RGATCY 2 cut(s) 1631, 2545
RsaI GTAC 7 cut(s) 588, 811, 1346, 1541, 2045, 2246, 2540
RsaNI GTAC 7 cut(s) 587, 810, 1345, 1540, 2044, 2245, 2539
SapI GCTCTTC 1 cut(s) 1482
SatI GCNGC 5 cut(s) 273, 1002, 2100, 2389, 2465
Sau96I GGNCC 2 cut(s) 203, 377
SchI GAGTC 2 cut(s) 301, 2425
ScrFI CCNGG 2 cut(s) 56, 1106
SduI GDGCHC 2 cut(s) 27, 471
SfaNI GCATC 6 cut(s) 744, 979, 1099, 1372, 1399, 2592
SfcI CTRYAG 2 cut(s) 1176, 2100
Sfr274I CTCGAG 1 cut(s) 2662
SfuI TTCGAA 2 cut(s) 386, 2424
SinI GGWCC 1 cut(s) 377
SlaI CTCGAG 1 cut(s) 2662
SmlI CTYRAG 2 cut(s) 1580, 2662
SmoI CTYRAG 2 cut(s) 1580, 2662
SsiI CCGC 6 cut(s) 224, 592, 663, 802, 1560, 2464
SspMI CTAG 3 cut(s) 1292, 1629, 1725
StyD4I CCNGG 2 cut(s) 54, 1104
TaaI ACNGT 4 cut(s) 338, 1177, 1349, 2430
TaiI ACGT 1 cut(s) 1529
TaqI TCGA 6 cut(s) 386, 580, 1990, 2168, 2424, 2663
TatI WGTACW 5 cut(s) 1344, 1539, 2043, 2244, 2538
TauI GCSGC 1 cut(s) 2467
TfiI GAWTC 4 cut(s) 237, 383, 1060, 2410
TscAI CASTG 4 cut(s) 74, 1347, 1854, 2405
TseFI GTSAC 1 cut(s) 2637
TseI GCWGC 4 cut(s) 272, 1001, 2099, 2388
Tsp45I GTSAC 1 cut(s) 2637
TspGWI ACGGA 3 cut(s) 1274, 2558, 2751
TspRI CASTG 4 cut(s) 74, 1347, 1854, 2405
VpaK11BI GGWCC 1 cut(s) 377
VspI ATTAAT 2 cut(s) 162, 515
XceI RCATGY 3 cut(s) 1463, 1661, 2152
XcmI CCANNNNNNNNNTGG 1 cut(s) 728
XhoI CTCGAG 1 cut(s) 2662
XmiI GTMKAC 2 cut(s) 601, 1688
XmnI GAANNNNTTC 1 cut(s) 1059
XspI CTAG 3 cut(s) 1292, 1629, 1725
Zsp2I ATGCAT 1 cut(s) 2154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.