Prupe.3G186900_v2.0.a1

Protein of unknown function (DUF 659)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000444
Physical Location & Seq
Reverse (-)
20095554 .. 20099545
3992 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G186900.2

Sequence Viewer

Length: 2610 bp
ATGAAGTTTATTAGGATGATATCTCTAGAGGGTTTTGAGCCCGTCGCTGTCTCTCCACACAAACAAGACCCAGCATGGAAACACTGCCAACTTTTCATCAAAGACCAGCCCAATGGAGTTAAGGCTGAGCTGAAGAAGTGCATATATTGTGGCAAAGTGTTTCAGGGTGGTGGAATTAACAGGCTTAAATCCCACCTTGCTGGTCGAAAGGGCAATGGCCCTACTTGTGACCAAACCCCACCAGATGTTCGTCTTTCTATGTTACAGAGTTTAGATCATGGGATTGCAGCGTTTAGGCACAGGAAGAGTCAAATTGTTACAAACTCACATCACAGTCCTAGTGAATTAGACAATTCATTTGCTGAAAATGGGGAGTGCAAATTGATGGTAGGACCCGATTCGACTTCGCTTGTGAATCAAGAAGAAGATGTTGGAATGAGTGGGAATGGAGTTGGGTTGAGTGGTAATCTGACTAATGTACCCCTTGAAGTAGACAATTCTTATAGGAGTAATGCTGCAATGCATAGATCAGCTGGAGTGCCCATATTGAATTTTTCGGTGAATCAAGAAGAAGATGCTGGAATGAGTGTGGATAGAAGAGTGAGGTGGAGGGGTGGAACTTCTTCTGCAGATACTGGTTCTGGTTCTGTTGATGGCGTTACGAAATTGAGTAATGTTTCAGCTCCTATTCCTATTGCAGTAGGTAGTGCTTTTTCTGAAGACACCCAAGGGAGATCAACTGGTTTTCCCAACTCATATTGGTTGGAAAATGAAGAAGAAGTTGGCATAAGTAATACAAATGTGAGTGCAAGGAAGAGGGTGAGAGGTGAAAGTGCTGTGGGGGCTGCCAATGCTGGAACTGTCGACAATAATTATGAAGTGAAAGAGGTCGGCAATCAACAAATTCATATGGCAATAGGGCGGTTTTTATATGAAATTCAGGCTCCCCTGGATGTGGTGAAGAACTCGGTTTATTTCCAGCCAATGATTGATGCTATTGCCTCTGGGGGAAAGGGGACTATAGCACCTTCATATGATGACCTTCGGGGTTGGATATTGAAGAATGCAGTTGGAGAGGTGAAGAGTGATATTCATCAGCACATGGAAACTTGGGCAAGGACTGGTTGCTCCCTTTTAGTCAACCAATGGAGTTCTGAAAAGGGTAAAACTTTGCTAAATTTTGCAGTGCAATGCCCTGAAGGAACAATCTATCTGAAATCTGTGGATGCTTCCTACTTTATTTTTTCCCCAGATGCTTTATTCGAGTTTCTTAAGGAAGTGGTGGAAGAAGTTGGAGTTGGGCATGTTTTGCAAGTCATTACAAATACTGAAGAGCAATTTGCTGTTGCTGGGAAGAGGTTGATGGATACATTCCCTACCCTGTACTGGTCTCCCTGTGTCGCCACTTCCATAGATTTGATCCTTGAGGATTTTGGAAAAGTTGAGTGGATAAATTCTGTAATTGAACAGGCTAGATCTGTTACAAGATTTATCTACAAACATGTTGTCATTTTGAATATGATGAGAAGGTATACTTTTGGTAATGACATTGTGAGGCTGGGAGTAACTAGGTTTGCTACAAACTTTACGACATTGAAGCAAATGGCTGACCTTAAATTTAATTTGCAGTCTATGGTTACTTCAAAAGAATGGATGTGCTGCCCCTACTCGAAAACACCAGAAGGATCAGCAGTGCTAGATGTATTAAGCAATCACTCATTTTGGTCTGCGTGCATTTTGGTCACACATTTAACAAACCCACTTTTGCGAGTTTTGAGAATTGTTGGTAGCCAGAAGAGGGCAGCAATGGGATATGTTTTTGCAGGAATATATCGAGCAAAAGAAACAATCAAAAGAGAACTTGTCAAGAGAGAAGAATACATGGTCTACTGGGATATTATCGATTACAGGTGGAAAAAGTTATGGCCTCTTCCTCTTCATGCTGCAGGTTTTTACCTTAATCCCAAGTTTTTCTATAGTGTCAAAGGAGACTTGCATAATGAGATCATATCAAGGATGTTTGACTGCATAGAGAGATTGGTTCCTGATATAAAAATCCAAGATGAAGTTATCAAAGAGATAAATTTGTACAAAAATGCTGTTGGAGATTTGGGGAGGAATTTGGCAGTTCGAGCTAGAGACAATCTACTTCCTGCTGAATGGTGGTCGACATATGGTAGTAGTTGCCCAAACCTTGCGCGCTTGGCAATTCGTATTCTCAGTCAAACTTGCAGCATAGTTCAAGGTCAGGAGAATCAAATTCCTTTTGAACTGTTGCACAAGACAAGGAACAGCTTAGAATGTCAACGGCTTAGTGATCTTGTTTTTGTTCAATACAACCTGAAACTAAAACAAAAGGTTCACAAGCACAAAGAACAGGAAAATGTGGGTCCTATATCATTTGACCGCAATAGCATTGTCGAAGACTGGGTGACAGAGATGGAAATGCCCCTAGAAGACAATGAAAATCCTGATTGGATGTCACTTGATCCCCCCTCTGGTAACACAAGGCTTTTAGAACTTTCAGTTGATGAAGCTGAAGATTTGGGTTCAGGGTTTGATGACAACGAGATCTTTATCAGATTGAAAGTGGTTCAAGGGGAATGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF659 Dimer_Tnp_hAT zf-BED

Protein Analysis

870

Amino Acids

97.38

Weight (kDa)

5.99

Isoelectric Point (pI)

35.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000444)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22220 AT3G22220 AT3G22220 AT3G22220 AT4G15020 AT4G15020
fragaria_vesca FvH4_6g39601 FvH4_6g39601 FvH4_6g39601 FvH4_6g39601 FvH4_6g39601 FvH4_7g22891 FvH4_7g22891 FvH4_7g22891
malus_domestica MD01G1137200.v1.1 MD02G1265900.v1.1 MD07G1202100.v1.1 MD09G1137900.v1.1 MD09G1138100.v1.1 MD17G1128400.v1.1
prunus_persica Prupe.2G058600_v2.0.a1 Prupe.2G058600_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1
pyrus_communis pycom01g15800 pycom01g15810 pycom01g15840 pycom02g22730 pycom07g18920 pycom07g18930 pycom09g05900 pycom17g12060
rosa_chinensis RchiOBHm_Chr1g0368051 RchiOBHm_Chr2g0153631 RchiOBHm_Chr2g0153641 RchiOBHm_Chr7g0237231
rosa_laevigata RLG00000001022 RLG00000020718
rosa_multiflora Rmu_sc0002117.1_g000006 Rmu_sc0004952.1_g000008 Rmu_sc0005823.1_g000001 Rmu_sc0013273.1_g000001 Rmu_sc0028071.1_g000001
rosa_roxburghii Rroxscaffold_1G00016080 Rroxscaffold_2G00094830 Rroxscaffold_4G00288900
rosa_rugosa Rorug01G0338600 Rorug01G0338700 Rorug02G0441100 Rorug02G0441200 Rorug04G0167900 Rorug07G0273200 Rorug07G0273300 Rorug07G0297100 Rorug07G0297200 Rorug07G0297300
rosa_samantha Rh1AG102500 Rh1AG102600 Rh1AG102700 Rh1AG345600 Rh1BG307900 Rh1CG323500 Rh1DG340000 Rh2AG504100 Rh2BG514800 Rh2CG490100 Rh2DG526900 Rh7AG451500 Rh7AG451700 Rh7AG459100 Rh7AG459200 Rh7BG400700 Rh7BG400800 Rh7BG421300 Rh7BG421400 Rh7BG423400 Rh7BG423500 Rh7BG423800 Rh7BG423900 Rh7CG471000 Rh7CG471100 Rh7CG471200
rosa_wichuraiana Rw1G030760 Rw2G041430 Rw5G036050 Rw7G038020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1937
AccI GTMKAC 5 cut(s) 492, 864, 1532, 1887, 2168
AccII CGCG 1 cut(s) 2200
AciI CCGC 2 cut(s) 922, 2407
AclWI GGATC 3 cut(s) 1414, 1693, 2483
AcsI RAATTY 9 cut(s) 550, 903, 936, 1177, 1453, 1616, 2083, 2119, 2259
AcuI CTGAAG 5 cut(s) 152, 738, 1218, 1350, 2559
AfaI GTAC 3 cut(s) 480, 1385, 2090
AfiI CCNNNNNNNGG 4 cut(s) 955, 1386, 1798, 2498
AflII CTTAAG 1 cut(s) 1271
AflIII ACRYGT 1 cut(s) 1501
AjnI CCWGG 1 cut(s) 948
AjuI GAANNNNNNNTTGG 6 cut(s) 414, 446, 765, 797, 1281, 1313
AluBI AGCT 6 cut(s) 130, 533, 683, 2135, 2295, 2537
AluI AGCT 6 cut(s) 130, 533, 683, 2135, 2295, 2537
Alw26I GTCTC 4 cut(s) 55, 1395, 1983, 2133
AlwI GGATC 3 cut(s) 1414, 1693, 2483
AlwNI CAGNNNCTG 1 cut(s) 635
AoxI GGCC 2 cut(s) 217, 1925
ApeKI GCWGC 7 cut(s) 287, 515, 845, 1659, 1802, 1943, 2232
ApoI RAATTY 9 cut(s) 550, 903, 936, 1177, 1453, 1616, 2083, 2119, 2259
ArsI GACNNNNNNTTYG 4 cut(s) 341, 373, 1491, 1523
Asp700I GAANNNNTTC 1 cut(s) 622
AspLEI GCGC 2 cut(s) 2200, 2202
AspS9I GGNCC 3 cut(s) 218, 392, 2390
AsuHPI GGTGA 6 cut(s) 571, 832, 839, 970, 1090, 2443
AvaII GGWCC 2 cut(s) 392, 2390
BaeGI GKGCMC 1 cut(s) 543
BaeI ACNNNNGTAYC 2 cut(s) 462, 495
BanII GRGCYC 1 cut(s) 42
BbsI GAAGAC 3 cut(s) 726, 2430, 2463
BbvI GCAGC 7 cut(s) 299, 502, 832, 1646, 1814, 1930, 2244
BccI CCATC 4 cut(s) 379, 647, 1357, 2434
BceAI ACGGC 1 cut(s) 2324
BciT130I CCWGG 1 cut(s) 950
BciVI GTATCC 1 cut(s) 1360
BcoDI GTCTC 4 cut(s) 55, 1395, 1983, 2133
BfaI CTAG 7 cut(s) 26, 339, 1473, 1569, 1697, 2136, 2453
BfmI CTRYAG 4 cut(s) 627, 1020, 1944, 1975
BfrI CTTAAG 1 cut(s) 1271
BfuAI ACCTGC 1 cut(s) 1937
BfuI GTATCC 1 cut(s) 1360
BglII AGATCT 2 cut(s) 1475, 2571
BisI GCNGC 7 cut(s) 288, 516, 846, 1660, 1803, 1944, 2233
BlpI GCTNAGC 1 cut(s) 126
BlsI GCNGC 7 cut(s) 289, 517, 847, 1661, 1804, 1945, 2234
Bme1390I CCNGG 1 cut(s) 950
Bme18I GGWCC 2 cut(s) 392, 2390
BmgT120I GGNCC 3 cut(s) 218, 392, 2390
BmiI GGNNCC 4 cut(s) 394, 945, 2043, 2391
BmrFI CCNGG 1 cut(s) 950
BmrI ACTGGG 2 cut(s) 1900, 2437
BmsI GCATC 4 cut(s) 565, 982, 1216, 1243
BmuI ACTGGG 2 cut(s) 1900, 2437
BpiI GAAGAC 3 cut(s) 726, 2430, 2463
BpmI CTGGAG 1 cut(s) 555
Bpu1102I GCTNAGC 1 cut(s) 126
BpuEI CTTGAG 1 cut(s) 1445
Bsa29I ATCGAT 1 cut(s) 1902
BsaBI GATNNNNATC 2 cut(s) 1092, 2576
BsaI GGTCTC 1 cut(s) 1395
BsaJI CCNNGG 2 cut(s) 727, 948
Bsc4I CCNNNNNNNGG 4 cut(s) 955, 1386, 1798, 2498
Bse1I ACTGG 6 cut(s) 640, 745, 1126, 1391, 1895, 2432
Bse3DI GCAATG 4 cut(s) 220, 525, 1196, 1812
Bse8I GATNNNNATC 2 cut(s) 1092, 2576
BseBI CCWGG 1 cut(s) 950
BseCI ATCGAT 1 cut(s) 1902
BseDI CCNNGG 2 cut(s) 727, 948
BseGI GGATG 6 cut(s) 21, 958, 1231, 1659, 2022, 2484
BseJI GATNNNNATC 2 cut(s) 1092, 2576
BseLI CCNNNNNNNGG 4 cut(s) 955, 1386, 1798, 2498
BseMI GCAATG 4 cut(s) 220, 525, 1196, 1812
BseMII CTCAG 2 cut(s) 117, 2233
BseNI ACTGG 6 cut(s) 640, 745, 1126, 1391, 1895, 2432
BsePI GCGCGC 1 cut(s) 2198
BseSI GKGCMC 1 cut(s) 543
BseXI GCAGC 7 cut(s) 299, 502, 832, 1646, 1814, 1930, 2244
BseYI CCCAGC 3 cut(s) 70, 1349, 1558
Bsh1236I CGCG 1 cut(s) 2200
BshFI GGCC 2 cut(s) 219, 1927
BshVI ATCGAT 1 cut(s) 1902
BslFI GGGAC 1 cut(s) 1030
BslI CCNNNNNNNGG 4 cut(s) 955, 1386, 1798, 2498
BsmAI GTCTC 4 cut(s) 55, 1395, 1983, 2133
BsmFI GGGAC 1 cut(s) 1030
BsmI GAATGC 1 cut(s) 1069
BsnI GGCC 2 cut(s) 219, 1927
Bso31I GGTCTC 1 cut(s) 1395
Bsp1286I GDGCHC 2 cut(s) 42, 543
Bsp1407I TGTACA 1 cut(s) 2088
Bsp1720I GCTNAGC 1 cut(s) 126
BspACI CCGC 2 cut(s) 922, 2407
BspANI GGCC 2 cut(s) 219, 1927
BspCNI CTCAG 2 cut(s) 118, 2232
BspDI ATCGAT 1 cut(s) 1902
BspFNI CGCG 1 cut(s) 2200
BspLI GGNNCC 4 cut(s) 394, 945, 2043, 2391
BspMAI CTGCAG 2 cut(s) 631, 1948
BspMI ACCTGC 1 cut(s) 1937
BspPI GGATC 3 cut(s) 1414, 1693, 2483
BspQI GCTCTTC 1 cut(s) 1326
BspTI CTTAAG 1 cut(s) 1271
BspTNI GGTCTC 1 cut(s) 1395
BsrDI GCAATG 4 cut(s) 220, 525, 1196, 1812
BsrGI TGTACA 1 cut(s) 2088
BsrI ACTGG 6 cut(s) 640, 745, 1126, 1391, 1895, 2432
BssECI CCNNGG 2 cut(s) 727, 948
BssHII GCGCGC 1 cut(s) 2198
BssNAI GTATAC 1 cut(s) 1533
BssT1I CCWWGG 1 cut(s) 727
Bst1107I GTATAC 1 cut(s) 1533
Bst2UI CCWGG 1 cut(s) 950
Bst4CI ACNGT 3 cut(s) 335, 862, 2274
Bst6I CTCTTC 9 cut(s) 299, 592, 809, 1076, 1326, 1349, 1790, 1935, 1941
BstAFI CTTAAG 1 cut(s) 1271
BstAPI GCANNNNNTGC 1 cut(s) 1309
BstAUI TGTACA 1 cut(s) 2088
BstC8I GCNNGC 2 cut(s) 1732, 2200
BstDEI CTNAG 4 cut(s) 126, 2219, 2296, 2312
BstF5I GGATG 6 cut(s) 21, 958, 1231, 1659, 2022, 2484
BstFNI CGCG 1 cut(s) 2200
BstHHI GCGC 2 cut(s) 2200, 2202
BstMAI GTCTC 4 cut(s) 55, 1395, 1983, 2133
BstMWI GCNNNNNNNGC 5 cut(s) 842, 851, 1309, 2132, 2204
BstNI CCWGG 1 cut(s) 950
BstNSI RCATGY 2 cut(s) 1307, 1505
BstSCI CCNGG 1 cut(s) 948
BstSFI CTRYAG 4 cut(s) 627, 1020, 1944, 1975
BstSLI GKGCMC 1 cut(s) 543
BstUI CGCG 1 cut(s) 2200
BstV1I GCAGC 7 cut(s) 299, 502, 832, 1646, 1814, 1930, 2244
BstV2I GAAGAC 3 cut(s) 726, 2430, 2463
BstX2I RGATCY 2 cut(s) 1475, 2571
BstXI CCANNNNNNTGG 2 cut(s) 113, 200
BstYI RGATCY 2 cut(s) 1475, 2571
BstZ17I GTATAC 1 cut(s) 1533
Bsu15I ATCGAT 1 cut(s) 1902
BsuI GTATCC 1 cut(s) 1360
BsuRI GGCC 2 cut(s) 219, 1927
BsuTUI ATCGAT 1 cut(s) 1902
BtsCI GGATG 6 cut(s) 21, 958, 1231, 1659, 2022, 2484
BtsI GCAGTG 3 cut(s) 82, 1191, 1698
BtsIMutI CAGTG 3 cut(s) 82, 1191, 1698
BveI ACCTGC 1 cut(s) 1937
Cac8I GCNNGC 2 cut(s) 1732, 2200
CaiI CAGNNNCTG 1 cut(s) 635
CfoI GCGC 2 cut(s) 2200, 2202
Cfr13I GGNCC 3 cut(s) 218, 392, 2390
ClaI ATCGAT 1 cut(s) 1902
Csp6I GTAC 3 cut(s) 479, 1384, 2089
CviAII CATG 7 cut(s) 75, 278, 1102, 1304, 1502, 1882, 1940
CviQI GTAC 3 cut(s) 479, 1384, 2089
DdeI CTNAG 4 cut(s) 126, 2219, 2296, 2312
Eam1104I CTCTTC 9 cut(s) 299, 592, 809, 1076, 1326, 1349, 1790, 1935, 1941
EarI CTCTTC 9 cut(s) 299, 592, 809, 1076, 1326, 1349, 1790, 1935, 1941
Eco130I CCWWGG 1 cut(s) 727
Eco24I GRGCYC 1 cut(s) 42
Eco31I GGTCTC 1 cut(s) 1395
Eco32I GATATC 1 cut(s) 21
Eco47I GGWCC 2 cut(s) 392, 2390
Eco57I CTGAAG 5 cut(s) 152, 738, 1218, 1350, 2559
EcoO109I RGGNCCY 2 cut(s) 392, 2390
EcoRII CCWGG 1 cut(s) 948
EcoRV GATATC 1 cut(s) 21
EcoT14I CCWWGG 1 cut(s) 727
EcoT22I ATGCAT 1 cut(s) 525
EcoT38I GRGCYC 1 cut(s) 42
ErhI CCWWGG 1 cut(s) 727
FaeI CATG 7 cut(s) 78, 281, 1105, 1307, 1505, 1885, 1943
FalI AAGNNNNNCTT 2 cut(s) 1519, 1551
FaqI GGGAC 1 cut(s) 1030
FatI CATG 7 cut(s) 74, 277, 1101, 1303, 1501, 1881, 1939
FauNDI CATATG 3 cut(s) 909, 1033, 2173
FblI GTMKAC 5 cut(s) 492, 864, 1532, 1887, 2168
Fnu4HI GCNGC 7 cut(s) 288, 516, 846, 1660, 1803, 1944, 2233
FokI GGATG 6 cut(s) 28, 965, 1238, 1666, 2029, 2491
FriOI GRGCYC 1 cut(s) 42
Fsp4HI GCNGC 7 cut(s) 288, 516, 846, 1660, 1803, 1944, 2233
FspBI CTAG 7 cut(s) 26, 339, 1473, 1569, 1697, 2136, 2453
GlaI GCGC 2 cut(s) 2199, 2201
GluI GCNGC 7 cut(s) 288, 516, 846, 1660, 1803, 1944, 2233
GsaI CCCAGC 3 cut(s) 74, 1353, 1562
GsuI CTGGAG 1 cut(s) 555
HaeIII GGCC 2 cut(s) 219, 1927
HhaI GCGC 2 cut(s) 2200, 2202
Hin1II CATG 7 cut(s) 78, 281, 1105, 1307, 1505, 1885, 1943
Hin6I GCGC 2 cut(s) 2198, 2200
HinP1I GCGC 2 cut(s) 2198, 2200
HincII GTYRAC 4 cut(s) 865, 1141, 2169, 2306
HindII GTYRAC 4 cut(s) 865, 1141, 2169, 2306
HinfI GANTC 5 cut(s) 307, 398, 415, 562, 2254
HphI GGTGA 6 cut(s) 571, 832, 839, 970, 1090, 2443
Hpy166II GTNNAC 8 cut(s) 493, 865, 1141, 1533, 1888, 2169, 2306, 2362
Hpy188I TCNGA 5 cut(s) 471, 718, 1156, 1215, 2582
Hpy188III TCNNGA 7 cut(s) 26, 419, 566, 1867, 2045, 2249, 2471
Hpy8I GTNNAC 8 cut(s) 493, 865, 1141, 1533, 1888, 2169, 2306, 2362
Hpy99I CGWCG 1 cut(s) 47
HpyAV CCTTC 5 cut(s) 1038, 1052, 1193, 1521, 1676
HpyCH4III ACNGT 3 cut(s) 335, 862, 2274
HpyF10VI GCNNNNNNNGC 5 cut(s) 842, 851, 1309, 2132, 2204
HpyF3I CTNAG 4 cut(s) 126, 2219, 2296, 2312
Hsp92II CATG 7 cut(s) 78, 281, 1105, 1307, 1505, 1885, 1943
HspAI GCGC 2 cut(s) 2198, 2200
LguI GCTCTTC 1 cut(s) 1326
LmnI GCTCC 3 cut(s) 688, 949, 1133
Lsp1109I GCAGC 7 cut(s) 299, 502, 832, 1646, 1814, 1930, 2244
LweI GCATC 4 cut(s) 565, 982, 1216, 1243
MaeI CTAG 7 cut(s) 26, 339, 1473, 1569, 1697, 2136, 2453
MflI RGATCY 2 cut(s) 1475, 2571
MhlI GDGCHC 2 cut(s) 42, 543
MlyI GAGTC 1 cut(s) 316
MmeI TCCRAC 6 cut(s) 412, 744, 1031, 1051, 1273, 2083
Mph1103I ATGCAT 1 cut(s) 525
MroXI GAANNNNTTC 1 cut(s) 622
MseI TTAA 9 cut(s) 120, 177, 186, 1272, 1614, 1620, 1706, 1751, 1959
MspA1I CMGCKG 1 cut(s) 533
MspCI CTTAAG 1 cut(s) 1271
MspR9I CCNGG 1 cut(s) 950
Mva1269I GAATGC 1 cut(s) 1069
MvaI CCWGG 1 cut(s) 950
MvnI CGCG 1 cut(s) 2200
MwoI GCNNNNNNNGC 5 cut(s) 842, 851, 1309, 2132, 2204
NdeI CATATG 3 cut(s) 909, 1033, 2173
NlaIII CATG 7 cut(s) 78, 281, 1105, 1307, 1505, 1885, 1943
NlaIV GGNNCC 4 cut(s) 394, 945, 2043, 2391
NmuCI GTSAC 4 cut(s) 227, 1741, 2431, 2481
NsiI ATGCAT 1 cut(s) 525
NspI RCATGY 2 cut(s) 1307, 1505
PauI GCGCGC 1 cut(s) 2198
PciI ACATGT 1 cut(s) 1501
PciSI GCTCTTC 1 cut(s) 1326
PctI GAATGC 1 cut(s) 1069
PdmI GAANNNNTTC 1 cut(s) 622
PfeI GAWTC 4 cut(s) 398, 415, 562, 2254
PkrI GCNGC 7 cut(s) 289, 517, 847, 1661, 1804, 1945, 2234
PleI GAGTC 1 cut(s) 315
PpsI GAGTC 1 cut(s) 315
PpuMI RGGWCCY 2 cut(s) 392, 2390
PscI ACATGT 1 cut(s) 1501
Psp5II RGGWCCY 2 cut(s) 392, 2390
Psp6I CCWGG 1 cut(s) 948
PspFI CCCAGC 3 cut(s) 70, 1349, 1558
PspGI CCWGG 1 cut(s) 948
PspN4I GGNNCC 4 cut(s) 394, 945, 2043, 2391
PspPI GGNCC 3 cut(s) 218, 392, 2390
PspPPI RGGWCCY 2 cut(s) 392, 2390
PstI CTGCAG 2 cut(s) 631, 1948
PstNI CAGNNNCTG 1 cut(s) 635
PsuI RGATCY 2 cut(s) 1475, 2571
PteI GCGCGC 1 cut(s) 2198
PvuII CAGCTG 1 cut(s) 533
RsaI GTAC 3 cut(s) 480, 1385, 2090
RsaNI GTAC 3 cut(s) 479, 1384, 2089
SalI GTCGAC 2 cut(s) 863, 2167
SapI GCTCTTC 1 cut(s) 1326
SaqAI TTAA 9 cut(s) 120, 177, 186, 1272, 1614, 1620, 1706, 1751, 1959
SatI GCNGC 7 cut(s) 288, 516, 846, 1660, 1803, 1944, 2233
Sau96I GGNCC 3 cut(s) 218, 392, 2390
SchI GAGTC 1 cut(s) 316
ScrFI CCNGG 1 cut(s) 950
SduI GDGCHC 2 cut(s) 42, 543
SfaNI GCATC 4 cut(s) 565, 982, 1216, 1243
SfcI CTRYAG 4 cut(s) 627, 1020, 1944, 1975
SinI GGWCC 2 cut(s) 392, 2390
SmlI CTYRAG 2 cut(s) 1271, 1424
SmoI CTYRAG 2 cut(s) 1271, 1424
SsiI CCGC 2 cut(s) 922, 2407
SspMI CTAG 7 cut(s) 26, 339, 1473, 1569, 1697, 2136, 2453
StyD4I CCNGG 1 cut(s) 948
StyI CCWWGG 1 cut(s) 727
TaaI ACNGT 3 cut(s) 335, 862, 2274
TatI WGTACW 2 cut(s) 1383, 2088
TfiI GAWTC 4 cut(s) 398, 415, 562, 2254
Tru1I TTAA 9 cut(s) 120, 177, 186, 1272, 1614, 1620, 1706, 1751, 1959
Tru9I TTAA 9 cut(s) 120, 177, 186, 1272, 1614, 1620, 1706, 1751, 1959
TscAI CASTG 3 cut(s) 89, 1191, 1698
TseFI GTSAC 4 cut(s) 227, 1741, 2431, 2481
TseI GCWGC 7 cut(s) 287, 515, 845, 1659, 1802, 1943, 2232
Tsp45I GTSAC 4 cut(s) 227, 1741, 2431, 2481
TspRI CASTG 3 cut(s) 89, 1191, 1698
Vha464I CTTAAG 1 cut(s) 1271
VpaK11BI GGWCC 2 cut(s) 392, 2390
XapI RAATTY 9 cut(s) 550, 903, 936, 1177, 1453, 1616, 2083, 2119, 2259
XbaI TCTAGA 1 cut(s) 25
XceI RCATGY 2 cut(s) 1307, 1505
XmiI GTMKAC 5 cut(s) 492, 864, 1532, 1887, 2168
XmnI GAANNNNTTC 1 cut(s) 622
XspI CTAG 7 cut(s) 26, 339, 1473, 1569, 1697, 2136, 2453
Zsp2I ATGCAT 1 cut(s) 525
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.