Rh1AG345600

Protein of unknown function (DUF 659)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000444
Physical Location & Seq
Forward (+)
58156066 .. 58160917
4852 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG345600.1

Sequence Viewer

Length: 1806 bp
ATGGAGCCTGTGGCGATTACGTCACAGAAACATGACCCGGCTTGGAAACACTGCCAAATGTTTAAGAGTGGGGATAGAATTCAGCTCAAGTGTATATATTGTAGCAAGTTGTTTAGGGGTGGAGGGATTCATAGGATTAAGGAACACCTTGCAGGCCAGAAGGGCAATGCTTCCACTTGTTTGAGGGTTCCGCCGGATGTTCGGGCTCTAATGCAGCAGAGTTTAGATGGGGTTGTGGTTAAGAAGAGGAATAGGCAGAAGCTTGATGAGGAGATTACTAACATTACTCCCCCGCCGGATGGTGAGGTGGACTCACTTGGTGGGATTCAGAGTGATGTGAATAATGCGCTTGAGTTGACTGGAGTTCCACTTGAGACTAGTTCGAGGTTGTTGGTGAATCGAGAGGGGATAATGAGTGTTAGGAGTGTGGATAGGAGGAAGAGGGGGAGAGGGAAAAGCTCTTCATCGTCCCATGGTGCTCATGGTGTCTGTAATAGTGGTGCATTGGTTTCTAGAAAAGTGAACAGTTATGTTCACGAGGCAATTGGGAGATTTTTGTTTGATATTGGGGCACTTCCGGAGGCATTGAACTCAGCTTATCTCCAACCAATGATTGATGCAATTGCTTCGGGTGGTCAAGGGGTTGAGCCTCCCACGTATCATGATCTTCGGAGTTGGATATTGAAGAATTCGGTTGAGGAAGTGAGGAATAATATTGATAAACATAGGGCAATGTGGGGAAGGACTGGTTGCTCTATTTTGGTTGATCAGTGGAACACCGAGTTAGATAATGTTATGCTAAGTTTTCTGGTGTACTGTCCCGAAGGAACTGTGTTTTTGGAATCTATGGATGCATCAGCGATTATAAATTCCTCAGATGCTCTTTACGATTTGCTTAGGAGAGTGGTAGAATATGTTGGAGTAGGAGATGTAGTTCAAGTGATTACTAGCTGTGAAGAGCAATTTATAGTTGCAGGGAGAAGGTTGACTGATACATTCCCTACTCTGTATTGGATTCCATGTGCAGCTCGTTGTCTGGACTTGATACTTGAGGATTTTTGTAGCATTGAGTGGATACATGCAGTAATTGAGCAAGCTAGATCCATCACAAAGTTTGTGTACAATAACAATGTAGTTTTAAATATGGTTAGAAGGTCCACTTTTGGCAATGATATAGTAGAACCAGGAGTCACTCGCTTTGGTACAAACTTTACAACATTGAAACGACTGGCTGAGCTGAAACACTGTTTACAGGTCATGGTGACTTCGCAAGAGTGGATGGAGTGCCCATATTCAAAGGAACCAGGGGGATTGGAGATGTCAGATCTTATAAGTGACAGGGATCAATCATTTTGGTCCTCATGCACCCTGGTTGTTCGTCTGACAGGTCCTCTCTTGCGAGTTTTGAGAATGGTTGGTTGTGAGAAGAGGCCTGCAATGGGTTTTATTTATGCTGGAATGTATCGGGCAAAAGAAGCAATTAAGAAAGAACTTGTCAAGAGAGAGGAGTACATGGTGTACTGGAATATTATAGATCAACGATGGGAACAGCATTGGAATTTTCCTCTTCATACTGCAGGGTTCTACCTTAACCCTAAAATATTTTATAGCATTGAAGGAGATATCCATAATAGTATCCAGTCAGGAATGTATGATTGCATAGAGAGATTGGTTCCCGATATAAAAGTCCAAGATAAAATCATGAAAGAGATAATTTCATACAAGAATGCTGCCGGGGATTTTCGGAGGAAGATGGCCATTCGGGCAAGAGACACTCTGCTTCCTGGTGAGAGCTCATTATATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF659 Dimer_Tnp_hAT zf-BED

Protein Analysis

601

Amino Acids

67.95

Weight (kDa)

7.83

Isoelectric Point (pI)

51.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF659 PF04937 218 - 369 1.7e-55 Domain of unknown function (DUF659)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000444)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22220 AT3G22220 AT3G22220 AT3G22220 AT4G15020 AT4G15020
fragaria_vesca FvH4_6g39601 FvH4_6g39601 FvH4_6g39601 FvH4_6g39601 FvH4_6g39601 FvH4_7g22891 FvH4_7g22891 FvH4_7g22891
malus_domestica MD01G1137200.v1.1 MD02G1265900.v1.1 MD07G1202100.v1.1 MD09G1137900.v1.1 MD09G1138100.v1.1 MD17G1128400.v1.1
prunus_persica Prupe.2G058600_v2.0.a1 Prupe.2G058600_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1
pyrus_communis pycom01g15800 pycom01g15810 pycom01g15840 pycom02g22730 pycom07g18920 pycom07g18930 pycom09g05900 pycom17g12060
rosa_chinensis RchiOBHm_Chr1g0368051 RchiOBHm_Chr2g0153631 RchiOBHm_Chr2g0153641 RchiOBHm_Chr7g0237231
rosa_laevigata RLG00000001022 RLG00000020718
rosa_multiflora Rmu_sc0002117.1_g000006 Rmu_sc0004952.1_g000008 Rmu_sc0005823.1_g000001 Rmu_sc0013273.1_g000001 Rmu_sc0028071.1_g000001
rosa_roxburghii Rroxscaffold_1G00016080 Rroxscaffold_2G00094830 Rroxscaffold_4G00288900
rosa_rugosa Rorug01G0338600 Rorug01G0338700 Rorug02G0441100 Rorug02G0441200 Rorug04G0167900 Rorug07G0273200 Rorug07G0273300 Rorug07G0297100 Rorug07G0297200 Rorug07G0297300
rosa_samantha Rh1AG102500 Rh1AG102600 Rh1AG102700 Rh1AG345600 Rh1BG307900 Rh1CG323500 Rh1DG340000 Rh2AG504100 Rh2BG514800 Rh2CG490100 Rh2DG526900 Rh7AG451500 Rh7AG451700 Rh7AG459100 Rh7AG459200 Rh7BG400700 Rh7BG400800 Rh7BG421300 Rh7BG421400 Rh7BG423400 Rh7BG423500 Rh7BG423800 Rh7BG423900 Rh7CG471000 Rh7CG471100 Rh7CG471200
rosa_wichuraiana Rw1G030760 Rw2G041430 Rw5G036050 Rw7G038020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 866, 1331
AccIII TCCGGA 1 cut(s) 577
AciI CCGC 2 cut(s) 191, 293
AclWI GGATC 2 cut(s) 1095, 1350
AcoI YGGCCR 1 cut(s) 1755
AcsI RAATTY 4 cut(s) 78, 688, 868, 1558
AdeI CACNNNGTG 1 cut(s) 320
AfaI GTAC 5 cut(s) 815, 1121, 1204, 1511, 1520
AfiI CCNNNNNNNGG 2 cut(s) 299, 1439
AgsI TTSAA 6 cut(s) 589, 685, 938, 1222, 1296, 1616
AhlI ACTAGT 1 cut(s) 377
AjnI CCWGG 4 cut(s) 1183, 1303, 1368, 1783
AloI GAACNNNNNNTCC 2 cut(s) 918, 950
AluBI AGCT 9 cut(s) 85, 262, 459, 596, 951, 1028, 1097, 1237, 1794
AluI AGCT 9 cut(s) 85, 262, 459, 596, 951, 1028, 1097, 1237, 1794
Alw21I GWGCWC 2 cut(s) 481, 1796
Alw26I GTCTC 2 cut(s) 368, 1764
AlwI GGATC 2 cut(s) 1095, 1350
Aor13HI TCCGGA 1 cut(s) 577
AoxI GGCC 3 cut(s) 154, 1430, 1755
ApeKI GCWGC 3 cut(s) 214, 1025, 1730
ApoI RAATTY 4 cut(s) 78, 688, 868, 1558
AspLEI GCGC 1 cut(s) 349
AspS9I GGNCC 3 cut(s) 1155, 1356, 1388
AsuC2I CCSGG 2 cut(s) 38, 1735
AsuHPI GGTGA 4 cut(s) 314, 406, 1273, 1799
AvaII GGWCC 3 cut(s) 1155, 1356, 1388
BaeGI GKGCMC 2 cut(s) 574, 1289
BalI TGGCCA 1 cut(s) 1757
BanII GRGCYC 2 cut(s) 208, 1796
BauI CACGAG 1 cut(s) 536
Bbv12I GWGCWC 2 cut(s) 481, 1796
BbvI GCAGC 3 cut(s) 226, 1037, 1717
BccI CCATC 6 cut(s) 221, 293, 1112, 1273, 1536, 1747
BcgI CGANNNNNNTGC 2 cut(s) 609, 643
BciT130I CCWGG 4 cut(s) 1185, 1305, 1370, 1785
BciVI GTATCC 2 cut(s) 1068, 1646
BclI TGATCA 1 cut(s) 766
BcnI CCSGG 2 cut(s) 38, 1735
BcoDI GTCTC 2 cut(s) 368, 1764
BcuI ACTAGT 1 cut(s) 377
BfaI CTAG 4 cut(s) 378, 513, 948, 1098
BfmI CTRYAG 1 cut(s) 1575
BfuI GTATCC 2 cut(s) 1068, 1646
BglI GCCNNNNNGGC 2 cut(s) 162, 1763
BglII AGATCT 1 cut(s) 1324
BisI GCNGC 3 cut(s) 215, 1026, 1731
BlpI GCTNAGC 1 cut(s) 1233
BlsI GCNGC 3 cut(s) 216, 1027, 1732
Bme1390I CCNGG 6 cut(s) 38, 1185, 1305, 1370, 1735, 1785
Bme18I GGWCC 3 cut(s) 1155, 1356, 1388
BmgT120I GGNCC 3 cut(s) 1155, 1356, 1388
BmiI GGNNCC 4 cut(s) 6, 189, 1302, 1674
BmrFI CCNGG 6 cut(s) 38, 1185, 1305, 1370, 1735, 1785
BmsI GCATC 4 cut(s) 607, 841, 863, 868
BplI GAGNNNNNCTC 2 cut(s) 296, 328
BpmI CTGGAG 1 cut(s) 381
Bpu10I CCTNAGC 1 cut(s) 896
Bpu1102I GCTNAGC 1 cut(s) 1233
BpuEI CTTGAG 4 cut(s) 71, 371, 392, 1070
BpuMI CCSGG 2 cut(s) 38, 1735
BsaAI YACGTR 1 cut(s) 657
BsaJI CCNNGG 4 cut(s) 472, 1304, 1368, 1734
BsaWI WCCGGW 1 cut(s) 577
BsaXI ACNNNNNCTCC 2 cut(s) 918, 948
Bsc4I CCNNNNNNNGG 2 cut(s) 299, 1439
Bse1I ACTGG 5 cut(s) 364, 751, 1233, 1526, 1639
Bse3DI GCAATG 4 cut(s) 172, 738, 1174, 1443
BseAI TCCGGA 1 cut(s) 577
BseBI CCWGG 4 cut(s) 1185, 1305, 1370, 1785
BseDI CCNNGG 4 cut(s) 472, 1304, 1368, 1734
BseGI GGATG 4 cut(s) 202, 304, 856, 1284
BseLI CCNNNNNNNGG 2 cut(s) 299, 1439
BseMI GCAATG 4 cut(s) 172, 738, 1174, 1443
BseMII CTCAG 3 cut(s) 606, 888, 1224
BseNI ACTGG 5 cut(s) 364, 751, 1233, 1526, 1639
BseRI GAGGAG 2 cut(s) 284, 1520
BseSI GKGCMC 2 cut(s) 574, 1289
BseXI GCAGC 3 cut(s) 226, 1037, 1717
BsgI GTGCAG 1 cut(s) 1044
BshFI GGCC 3 cut(s) 156, 1432, 1757
BsiHKAI GWGCWC 2 cut(s) 481, 1796
BsiSI CCGG 5 cut(s) 38, 194, 296, 578, 1734
BslFI GGGAC 2 cut(s) 454, 804
BslI CCNNNNNNNGG 2 cut(s) 299, 1439
BsmAI GTCTC 2 cut(s) 368, 1764
BsmFI GGGAC 2 cut(s) 454, 804
BsmI GAATGC 1 cut(s) 1732
BsnI GGCC 3 cut(s) 156, 1432, 1757
Bsp1286I GDGCHC 5 cut(s) 208, 481, 574, 1289, 1796
Bsp13I TCCGGA 1 cut(s) 577
Bsp1407I TGTACA 1 cut(s) 1119
Bsp143I GATC 6 cut(s) 664, 766, 1100, 1324, 1342, 1534
Bsp1720I GCTNAGC 1 cut(s) 1233
Bsp19I CCATGG 1 cut(s) 472
BspACI CCGC 2 cut(s) 191, 293
BspANI GGCC 3 cut(s) 156, 1432, 1757
BspCNI CTCAG 3 cut(s) 605, 887, 1225
BspEI TCCGGA 1 cut(s) 577
BspHI TCATGA 2 cut(s) 661, 1701
BspLI GGNNCC 4 cut(s) 6, 189, 1302, 1674
BspMAI CTGCAG 1 cut(s) 1579
BspPI GGATC 2 cut(s) 1095, 1350
BspQI GCTCTTC 2 cut(s) 466, 951
BsrDI GCAATG 4 cut(s) 172, 738, 1174, 1443
BsrGI TGTACA 1 cut(s) 1119
BsrI ACTGG 5 cut(s) 364, 751, 1233, 1526, 1639
BssECI CCNNGG 4 cut(s) 472, 1304, 1368, 1734
BssMI GATC 6 cut(s) 664, 766, 1100, 1324, 1342, 1534
BssSI CACGAG 1 cut(s) 536
BssT1I CCWWGG 1 cut(s) 472
Bst2BI CACGAG 1 cut(s) 536
Bst2UI CCWGG 4 cut(s) 1185, 1305, 1370, 1785
Bst4CI ACNGT 4 cut(s) 527, 818, 832, 1247
Bst6I CTCTTC 6 cut(s) 239, 434, 466, 951, 1421, 1572
BstAUI TGTACA 1 cut(s) 1119
BstBAI YACGTR 1 cut(s) 657
BstC8I GCNNGC 3 cut(s) 154, 1095, 1434
BstDEI CTNAG 5 cut(s) 592, 800, 874, 896, 1233
BstDSI CCRYGG 1 cut(s) 472
BstF5I GGATG 4 cut(s) 202, 304, 856, 1284
BstHHI GCGC 1 cut(s) 349
BstKTI GATC 6 cut(s) 667, 769, 1103, 1327, 1345, 1537
BstMAI GTCTC 2 cut(s) 368, 1764
BstMBI GATC 6 cut(s) 664, 766, 1100, 1324, 1342, 1534
BstMWI GCNNNNNNNGC 3 cut(s) 162, 1475, 1763
BstNI CCWGG 4 cut(s) 1185, 1305, 1370, 1785
BstNSI RCATGY 1 cut(s) 1082
BstSCI CCNGG 6 cut(s) 36, 1183, 1303, 1368, 1733, 1783
BstSFI CTRYAG 1 cut(s) 1575
BstSLI GKGCMC 2 cut(s) 574, 1289
BstV1I GCAGC 3 cut(s) 226, 1037, 1717
BstX2I RGATCY 2 cut(s) 1100, 1324
BstYI RGATCY 2 cut(s) 1100, 1324
BsuI GTATCC 2 cut(s) 1068, 1646
BsuRI GGCC 3 cut(s) 156, 1432, 1757
BtgI CCRYGG 1 cut(s) 472
BtsCI GGATG 4 cut(s) 202, 304, 856, 1284
BtsI GCAGTG 1 cut(s) 49
BtsIMutI CAGTG 3 cut(s) 49, 776, 1243
Cac8I GCNNGC 3 cut(s) 154, 1095, 1434
CciI TCATGA 2 cut(s) 661, 1701
CfoI GCGC 1 cut(s) 349
Cfr13I GGNCC 3 cut(s) 1155, 1356, 1388
Csp6I GTAC 5 cut(s) 814, 1120, 1203, 1510, 1519
CviQI GTAC 5 cut(s) 814, 1120, 1203, 1510, 1519
DdeI CTNAG 5 cut(s) 592, 800, 874, 896, 1233
DpnI GATC 6 cut(s) 666, 768, 1102, 1326, 1344, 1536
DpnII GATC 6 cut(s) 664, 766, 1100, 1324, 1342, 1534
DraI TTTAAA 1 cut(s) 1140
DraIII CACNNNGTG 1 cut(s) 320
EaeI YGGCCR 1 cut(s) 1755
Eam1104I CTCTTC 6 cut(s) 239, 434, 466, 951, 1421, 1572
EarI CTCTTC 6 cut(s) 239, 434, 466, 951, 1421, 1572
EciI GGCGGA 1 cut(s) 180
Ecl136II GAGCTC 1 cut(s) 1794
Eco130I CCWWGG 1 cut(s) 472
Eco147I AGGCCT 1 cut(s) 1432
Eco24I GRGCYC 2 cut(s) 208, 1796
Eco32I GATATC 1 cut(s) 1624
Eco47I GGWCC 3 cut(s) 1155, 1356, 1388
Eco53kI GAGCTC 1 cut(s) 1794
EcoICRI GAGCTC 1 cut(s) 1794
EcoO109I RGGNCCY 1 cut(s) 1388
EcoRI GAATTC 2 cut(s) 78, 688
EcoRII CCWGG 4 cut(s) 1183, 1303, 1368, 1783
EcoRV GATATC 1 cut(s) 1624
EcoT14I CCWWGG 1 cut(s) 472
EcoT22I ATGCAT 1 cut(s) 856
EcoT38I GRGCYC 2 cut(s) 208, 1796
ErhI CCWWGG 1 cut(s) 472
FalI AAGNNNNNCTT 2 cut(s) 1144, 1176
FaqI GGGAC 2 cut(s) 454, 804
FauI CCCGC 1 cut(s) 300
FbaI TGATCA 1 cut(s) 766
Fnu4HI GCNGC 3 cut(s) 215, 1026, 1731
FokI GGATG 4 cut(s) 209, 311, 863, 1291
FriOI GRGCYC 2 cut(s) 208, 1796
Fsp4HI GCNGC 3 cut(s) 215, 1026, 1731
FspBI CTAG 4 cut(s) 378, 513, 948, 1098
GlaI GCGC 1 cut(s) 348
GluI GCNGC 3 cut(s) 215, 1026, 1731
GsuI CTGGAG 1 cut(s) 381
HaeIII GGCC 3 cut(s) 156, 1432, 1757
HapII CCGG 5 cut(s) 38, 194, 296, 578, 1734
HhaI GCGC 1 cut(s) 349
Hin6I GCGC 1 cut(s) 347
HinP1I GCGC 1 cut(s) 347
HincII GTYRAC 2 cut(s) 357, 987
HindII GTYRAC 2 cut(s) 357, 987
HindIII AAGCTT 1 cut(s) 260
HinfI GANTC 7 cut(s) 127, 311, 325, 397, 842, 1015, 1188
HpaII CCGG 5 cut(s) 38, 194, 296, 578, 1734
HphI GGTGA 4 cut(s) 314, 406, 1273, 1799
Hpy188I TCNGA 6 cut(s) 330, 672, 877, 1324, 1383, 1746
HpyAV CCTTC 6 cut(s) 154, 735, 818, 975, 1146, 1610
HpyCH4III ACNGT 4 cut(s) 527, 818, 832, 1247
HpyCH4IV ACGT 2 cut(s) 20, 656
HpyF10VI GCNNNNNNNGC 3 cut(s) 162, 1475, 1763
HpyF3I CTNAG 5 cut(s) 592, 800, 874, 896, 1233
HpySE526I ACGT 2 cut(s) 20, 656
HspAI GCGC 1 cut(s) 347
Kpn2I TCCGGA 1 cut(s) 577
Ksp22I TGATCA 1 cut(s) 766
Kzo9I GATC 6 cut(s) 664, 766, 1100, 1324, 1342, 1534
LguI GCTCTTC 2 cut(s) 466, 951
LmnI GCTCC 1 cut(s) 4
Lsp1109I GCAGC 3 cut(s) 226, 1037, 1717
LweI GCATC 4 cut(s) 607, 841, 863, 868
MaeI CTAG 4 cut(s) 378, 513, 948, 1098
MaeII ACGT 2 cut(s) 20, 656
MaeIII GTNAC 4 cut(s) 21, 1189, 1261, 1334
MalI GATC 6 cut(s) 666, 768, 1102, 1326, 1344, 1536
MboI GATC 6 cut(s) 664, 766, 1100, 1324, 1342, 1534
MboII GAAGA 9 cut(s) 256, 451, 453, 659, 697, 968, 1438, 1559, 1762
MfeI CAATTG 2 cut(s) 543, 621
MflI RGATCY 2 cut(s) 1100, 1324
MhlI GDGCHC 5 cut(s) 208, 481, 574, 1289, 1796
MlsI TGGCCA 1 cut(s) 1757
MluNI TGGCCA 1 cut(s) 1757
MlyI GAGTC 2 cut(s) 305, 1197
MmeI TCCRAC 3 cut(s) 628, 656, 898
Mox20I TGGCCA 1 cut(s) 1757
Mph1103I ATGCAT 1 cut(s) 856
MroI TCCGGA 1 cut(s) 577
MscI TGGCCA 1 cut(s) 1757
MseI TTAA 7 cut(s) 63, 138, 240, 1139, 1482, 1590, 1804
Msp20I TGGCCA 1 cut(s) 1757
MspI CCGG 5 cut(s) 38, 194, 296, 578, 1734
MspR9I CCNGG 6 cut(s) 38, 1185, 1305, 1370, 1735, 1785
MunI CAATTG 2 cut(s) 543, 621
Mva1269I GAATGC 1 cut(s) 1732
MvaI CCWGG 4 cut(s) 1185, 1305, 1370, 1785
MwoI GCNNNNNNNGC 3 cut(s) 162, 1475, 1763
NciI CCSGG 2 cut(s) 38, 1735
NcoI CCATGG 1 cut(s) 472
NdeII GATC 6 cut(s) 664, 766, 1100, 1324, 1342, 1534
NlaIV GGNNCC 4 cut(s) 6, 189, 1302, 1674
NmuCI GTSAC 4 cut(s) 21, 1189, 1261, 1334
NsiI ATGCAT 1 cut(s) 856
NspI RCATGY 1 cut(s) 1082
PagI TCATGA 2 cut(s) 661, 1701
PceI AGGCCT 1 cut(s) 1432
PciSI GCTCTTC 2 cut(s) 466, 951
PctI GAATGC 1 cut(s) 1732
PfeI GAWTC 5 cut(s) 127, 325, 397, 842, 1015
PkrI GCNGC 3 cut(s) 216, 1027, 1732
PleI GAGTC 2 cut(s) 305, 1196
PpsI GAGTC 2 cut(s) 305, 1196
Ppu21I YACGTR 1 cut(s) 657
PpuMI RGGWCCY 1 cut(s) 1388
PsiI TTATAA 2 cut(s) 866, 1331
Psp124BI GAGCTC 1 cut(s) 1796
Psp5II RGGWCCY 1 cut(s) 1388
Psp6I CCWGG 4 cut(s) 1183, 1303, 1368, 1783
PspGI CCWGG 4 cut(s) 1183, 1303, 1368, 1783
PspN4I GGNNCC 4 cut(s) 6, 189, 1302, 1674
PspPI GGNCC 3 cut(s) 1155, 1356, 1388
PspPPI RGGWCCY 1 cut(s) 1388
PstI CTGCAG 1 cut(s) 1579
PsuI RGATCY 2 cut(s) 1100, 1324
RsaI GTAC 5 cut(s) 815, 1121, 1204, 1511, 1520
RsaNI GTAC 5 cut(s) 814, 1120, 1203, 1510, 1519
SacI GAGCTC 1 cut(s) 1796
SapI GCTCTTC 2 cut(s) 466, 951
SaqAI TTAA 7 cut(s) 63, 138, 240, 1139, 1482, 1590, 1804
SatI GCNGC 3 cut(s) 215, 1026, 1731
Sau3AI GATC 6 cut(s) 664, 766, 1100, 1324, 1342, 1534
Sau96I GGNCC 3 cut(s) 1155, 1356, 1388
SchI GAGTC 2 cut(s) 305, 1197
ScrFI CCNGG 6 cut(s) 38, 1185, 1305, 1370, 1735, 1785
SduI GDGCHC 5 cut(s) 208, 481, 574, 1289, 1796
SfaNI GCATC 4 cut(s) 607, 841, 863, 868
SfcI CTRYAG 1 cut(s) 1575
SinI GGWCC 3 cut(s) 1155, 1356, 1388
SmlI CTYRAG 4 cut(s) 86, 350, 371, 1049
SmoI CTYRAG 4 cut(s) 86, 350, 371, 1049
SpeI ACTAGT 1 cut(s) 377
SseBI AGGCCT 1 cut(s) 1432
SsiI CCGC 2 cut(s) 191, 293
SspI AATATT 3 cut(s) 715, 1528, 1602
SspMI CTAG 4 cut(s) 378, 513, 948, 1098
SstI GAGCTC 1 cut(s) 1796
StuI AGGCCT 1 cut(s) 1432
StyD4I CCNGG 6 cut(s) 36, 1183, 1303, 1368, 1733, 1783
StyI CCWWGG 1 cut(s) 472
TaaI ACNGT 4 cut(s) 527, 818, 832, 1247
TaiI ACGT 2 cut(s) 23, 659
TaqI TCGA 2 cut(s) 383, 400
TatI WGTACW 4 cut(s) 813, 1119, 1509, 1518
TfiI GAWTC 5 cut(s) 127, 325, 397, 842, 1015
Tru1I TTAA 7 cut(s) 63, 138, 240, 1139, 1482, 1590, 1804
Tru9I TTAA 7 cut(s) 63, 138, 240, 1139, 1482, 1590, 1804
TscAI CASTG 3 cut(s) 56, 776, 1250
TseFI GTSAC 4 cut(s) 21, 1189, 1261, 1334
TseI GCWGC 3 cut(s) 214, 1025, 1730
Tsp45I GTSAC 4 cut(s) 21, 1189, 1261, 1334
TspDTI ATGAA 5 cut(s) 119, 453, 1559, 1707, 1718
TspRI CASTG 3 cut(s) 56, 776, 1250
VpaK11BI GGWCC 3 cut(s) 1155, 1356, 1388
XapI RAATTY 4 cut(s) 78, 688, 868, 1558
XbaI TCTAGA 1 cut(s) 512
XceI RCATGY 1 cut(s) 1082
XcmI CCANNNNNNNNNTGG 1 cut(s) 479
XspI CTAG 4 cut(s) 378, 513, 948, 1098
Zsp2I ATGCAT 1 cut(s) 856
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.