Rw2G041430

Protein of unknown function (DUF 659)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000444
Physical Location & Seq
Reverse (-)
67439181 .. 67442363
3183 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G041430.1

Sequence Viewer

Length: 2631 bp
ATGACATCTTTGGAGGGTTTTGAGCCCATAGCTATTTCCCCACAGAAACAAGACCCAGGATGGAAACACTGTCAACTTTACATTAAAACTGGGGACCCAAAAGTTGAGTTAAAGAAGTGTTTATATTGTGGCAAAGTGTTTCAGGGTGGAGGGATTAATAGGTTTAAATCTCACCTTGCTGGTAGAAAAGGAAATGGTCCCATTTGTGATCAGGTCCCTCCTCATGTTCGAGTTTCCATGTTGCAGTGCTTAGATGAAAAAATTGCATCTTTAAGGCACAGAAAGAGTCAAATGGCTGTGAACCCGAGTCGTAGTTTTAGTGAACTAGACAATGTGTTTGCTGAAAATGAAGTTGGAGGGCCCAATTTGATGAATCAAGAGGAAGATGTGGGAATGAGTGTTGATAATGGGATTAGGGTTGGTGATAATCTGACTGATGTGCCTCTTGAGATTGATGATTGTTTTAGGAGTGATGGTCTAGAGGGATTGACTACTGTGCCTCTTGCAGCAGTTGACTCGTATAAGGGTAATGCTCTAGGGAGAAAAGCTCGAGTACCGAATCACAGTTTTTCGGAAAATCGAGAGGTGGGTGTTGATAGACGAGTCGGGTGGAGAGGCGGAACTTCTTTTGTAGCTACTACTGCTGGTTTCGGCTCTGGTTCTGCTAATGCTACTAAATTGAGTTATGTCCCAGCTCCTATTCGTAGTGAGGTAGACAAGCCATTTTACGAAAACACGAAAGGAAGATCAGTTAGTCATCCCAATTCGTATTTGTTTGAAAATGAAACAGATGTTGGCACAAGTAATACAAATGGGAAGAACAGGAAGAGGGTAAGAGATGAAAATGGATCAATGGTTGCTAATGCTGGCACTATTGGCAATTATGGTGAAGTTGAAAAGGTGAACAGTCAGCAGATTCATATGGCAATAGGACGGTTCCTATATGAAATTCAGGCTCCTCTGGGTGCCGTGAAGAACTCTGTTTATTTTCAGCCAATGATTGATGCAATTGCTTCTGGGGGAATGGAGAGTAAACCACCCTCGTATCATGATCTTCGGGGTTGGATATTAAATAATGTGGTTGAAGAAGTAAAGAATGATATTCATCAGCGCATGAATACTTGGGAAAGGAATGGTTGCTCTCTTCTAGTAAACCAATTGAACTCCGAAAAGGGTAGAATATTGCTAAATTTCTCAGTGTACAGTCCCGAAGGAACAACATATTTGAAATCTGTGGATGCTTCCTCATTTATAAATTCTCCAGATGCTTTGTATGAGATTCTTAAGCAAGTGTTGGAAGAAGTTGGAGTTGGGCGTGTTTTGCAAGTAATTACAAATAGTGAAGAGCACTATGTTGTTGCTGGGAAGAGGTTGATGGATACGTTTCCTACGCTGTACTGGTCTCCCTGTGCTGCTGCTTGCATAAATCTGATACTTGAGGATTTTGGAAAAGTTGAGTGGATAAAATCTATTATAGAACAGGCTAGATCTGTTACTAGATTTATCTATAAACACGTCGTCATTCTGAATATGATGCGGAGGTATACTTTTGGAAATGACATTGTGAAGGTGGGAGTAACTCGGTTTGCTACAGACTTTATGACTTTGAAACAAATGGCTGACCTTAAATTCAATTTGCAGACTATGGTTACTTCGAAAGAATGGGAAGGGTGCCCTTATTCTCAAACATCAGAAGGATCAGCAATGCTGGATGTATTAAGTAATCACACATTTTGGTCTTCGTGCATTATGATCACCCGATTAACAAATCCGCTCCTGCGAGTTTTGAGAATTGTTGGTAGCCAGAAGAAGGCAGCAATGGGATATGTATTTGGAGGAATGTATCGAGCAAAAGAAACAATCAAGAGAGAACTTGTCAAGAAAGAAGAATATATGGCTTACTGGAATATTATAGATTACAGGTGGCAAAAATTATGGGATCTTCCTCTTCATGCTGCTGGTTTTTACCTTAATCCCAAGTTTTTCTATAGCATCAAGGGAGAAATGCACAAGGTGATTATGTCAAAAATGCTTGACTGCATAGTGAAATTGGTTCCAGATTTAAAAGTTCAAGACGAAATTAGCAAAGAGATAAACTGGTACAAAAATGCTGTTGGAGATCTGGGGAGGAGTTTGGCCGTTAGAGCTAGAGACACTCTGCTTCCCGCTGAATGGTGGTCTACATATGGCTGTGGTTGCCCAAATATGGCACGTTTTGCAGTTCATATTCTCAGTCAAACTTGCAGCTTAATTCAGTGCAAGGAGAATCAGATTCCTTTTGACCAACTGCACAAGACAAGGAACAGCTTAGAGCATCAACGGCTTAGTGATTTTGTCTTTGTTCAGTACAACTTGCAACTAAGACAGATGGTTCATAAGAACAAAGAGCATGAGTATGTGGATCCTATATCATTTGACAACACTAGCACTGTTGAAGACTGGATAACAGAGACTGAAATGTACCTAGAAGACCATGAAAATACTGATTGGAAGGCACTTGAACCGCCCTCTTATAATTCAAGGCTTTTAGAACTTTCAGTTGATGAAGCTGAAGACTTGGGTTCAGGGTTTGATGATAACGAGATTTTCTTAAACGGATTGCAATTGGTTAAAGAAGAAGGCAGAACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF659 Dimer_Tnp_hAT zf-BED

Protein Analysis

876

Amino Acids

99.09

Weight (kDa)

6.25

Isoelectric Point (pI)

37.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF659 PF04937 347 - 498 4.5e-55 Domain of unknown function (DUF659)
Dimer_Tnp_hAT PF05699 718 - 785 1.6e-06 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000444)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22220 AT3G22220 AT3G22220 AT3G22220 AT4G15020 AT4G15020
fragaria_vesca FvH4_6g39601 FvH4_6g39601 FvH4_6g39601 FvH4_6g39601 FvH4_6g39601 FvH4_7g22891 FvH4_7g22891 FvH4_7g22891
malus_domestica MD01G1137200.v1.1 MD02G1265900.v1.1 MD07G1202100.v1.1 MD09G1137900.v1.1 MD09G1138100.v1.1 MD17G1128400.v1.1
prunus_persica Prupe.2G058600_v2.0.a1 Prupe.2G058600_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1
pyrus_communis pycom01g15800 pycom01g15810 pycom01g15840 pycom02g22730 pycom07g18920 pycom07g18930 pycom09g05900 pycom17g12060
rosa_chinensis RchiOBHm_Chr1g0368051 RchiOBHm_Chr2g0153631 RchiOBHm_Chr2g0153641 RchiOBHm_Chr7g0237231
rosa_laevigata RLG00000001022 RLG00000020718
rosa_multiflora Rmu_sc0002117.1_g000006 Rmu_sc0004952.1_g000008 Rmu_sc0005823.1_g000001 Rmu_sc0013273.1_g000001 Rmu_sc0028071.1_g000001
rosa_roxburghii Rroxscaffold_1G00016080 Rroxscaffold_2G00094830 Rroxscaffold_4G00288900
rosa_rugosa Rorug01G0338600 Rorug01G0338700 Rorug02G0441100 Rorug02G0441200 Rorug04G0167900 Rorug07G0273200 Rorug07G0273300 Rorug07G0297100 Rorug07G0297200 Rorug07G0297300
rosa_samantha Rh1AG102500 Rh1AG102600 Rh1AG102700 Rh1AG345600 Rh1BG307900 Rh1CG323500 Rh1DG340000 Rh2AG504100 Rh2BG514800 Rh2CG490100 Rh2DG526900 Rh7AG451500 Rh7AG451700 Rh7AG459100 Rh7AG459200 Rh7BG400700 Rh7BG400800 Rh7BG421300 Rh7BG421400 Rh7BG423400 Rh7BG423500 Rh7BG423800 Rh7BG423900 Rh7CG471000 Rh7CG471100 Rh7CG471200
rosa_wichuraiana Rw1G030760 Rw2G041430 Rw5G036050 Rw7G038020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1253, 2514
AccB1I GGYRCC 2 cut(s) 965, 1671
AccBSI CCGCTC 1 cut(s) 1774
AccI GTMKAC 3 cut(s) 714, 1544, 2180
AciI CCGC 5 cut(s) 618, 1537, 1772, 2166, 2504
AclWI GGATC 5 cut(s) 856, 1705, 1947, 2396, 2409
AcoI YGGCCR 1 cut(s) 2136
AcsI RAATTY 4 cut(s) 948, 1189, 1255, 1628
AcuI CTGAAG 1 cut(s) 2571
AdeI CACNNNGTG 1 cut(s) 2014
AfaI GTAC 6 cut(s) 555, 1202, 1397, 2102, 2348, 2462
AfiI CCNNNNNNNGG 3 cut(s) 1810, 2172, 2206
AflII CTTAAG 1 cut(s) 1283
AflIII ACRYGT 1 cut(s) 1513
AjiI CACGTC 1 cut(s) 1516
AjnI CCWGG 1 cut(s) 55
AjuI GAANNNNNNNTTGG 6 cut(s) 336, 368, 777, 809, 1293, 1325
AluBI AGCT 8 cut(s) 32, 548, 635, 695, 2147, 2247, 2307, 2549
AluI AGCT 8 cut(s) 32, 548, 635, 695, 2147, 2247, 2307, 2549
Alw21I GWGCWC 1 cut(s) 1350
Alw26I GTCTC 3 cut(s) 1407, 2145, 2444
AlwI GGATC 5 cut(s) 856, 1705, 1947, 2396, 2409
AlwNI CAGNNNCTG 1 cut(s) 2453
Ama87I CYCGRG 2 cut(s) 304, 549
AoxI GGCC 2 cut(s) 359, 2136
ApaI GGGCCC 1 cut(s) 363
ApeKI GCWGC 6 cut(s) 506, 1412, 1415, 1814, 1955, 2244
ApoI RAATTY 4 cut(s) 948, 1189, 1255, 1628
ArsI GACNNNNNNTTYG 2 cut(s) 320, 352
AseI ATTAAT 1 cut(s) 156
AspLEI GCGC 1 cut(s) 1113
AspS9I GGNCC 5 cut(s) 94, 197, 214, 359, 360
AsuHPI GGTGA 6 cut(s) 164, 434, 899, 913, 1747, 2026
AsuII TTCGAA 1 cut(s) 1655
AvaI CYCGRG 2 cut(s) 304, 549
AvaII GGWCC 3 cut(s) 94, 197, 214
BaeGI GKGCMC 2 cut(s) 363, 1676
BaeI ACNNNNGTAYC 2 cut(s) 1028, 1061
BamHI GGATCC 1 cut(s) 2401
BanI GGYRCC 2 cut(s) 965, 1671
BanII GRGCYC 2 cut(s) 27, 363
BbsI GAAGAC 4 cut(s) 1731, 2442, 2475, 2559
Bbv12I GWGCWC 1 cut(s) 1350
BbvI GCAGC 6 cut(s) 518, 1399, 1402, 1826, 1942, 2256
BccI CCATC 4 cut(s) 54, 467, 1369, 2362
BceAI ACGGC 3 cut(s) 953, 2123, 2336
BcgI CGANNNNNNTGC 2 cut(s) 498, 532
BciT130I CCWGG 1 cut(s) 57
BciVI GTATCC 1 cut(s) 1372
BclI TGATCA 2 cut(s) 208, 1752
BcoDI GTCTC 3 cut(s) 1407, 2145, 2444
BfaI CTAG 9 cut(s) 326, 479, 536, 1148, 1485, 1497, 2148, 2424, 2465
BfmI CTRYAG 2 cut(s) 1590, 1987
BfrI CTTAAG 1 cut(s) 1283
BfuI GTATCC 1 cut(s) 1372
BglII AGATCT 2 cut(s) 1487, 2119
BisI GCNGC 6 cut(s) 507, 1413, 1416, 1815, 1956, 2245
BlsI GCNGC 6 cut(s) 508, 1414, 1417, 1816, 1957, 2246
Bme1390I CCNGG 1 cut(s) 57
Bme18I GGWCC 3 cut(s) 94, 197, 214
BmeT110I CYCGRG 2 cut(s) 304, 549
BmgBI CACGTC 1 cut(s) 1516
BmgT120I GGNCC 5 cut(s) 94, 197, 214, 359, 360
BmrFI CCNGG 1 cut(s) 57
BmrI ACTGGG 1 cut(s) 99
BmsI GCATC 7 cut(s) 275, 994, 1228, 1255, 1524, 2001, 2323
BmuI ACTGGG 1 cut(s) 99
BpiI GAAGAC 4 cut(s) 1731, 2442, 2475, 2559
BplI GAGNNNNNCTC 2 cut(s) 532, 564
BpmI CTGGAG 1 cut(s) 1245
Bpu14I TTCGAA 1 cut(s) 1655
BpuEI CTTGAG 2 cut(s) 467, 1457
BsaBI GATNNNNATC 1 cut(s) 1104
BsaI GGTCTC 1 cut(s) 1407
BsaJI CCNNGG 1 cut(s) 55
BsaXI ACNNNNNCTCC 2 cut(s) 460, 490
Bsc4I CCNNNNNNNGG 3 cut(s) 1810, 2172, 2206
Bse1I ACTGG 5 cut(s) 94, 1403, 1907, 2102, 2444
Bse3DI GCAATG 2 cut(s) 1710, 1824
Bse8I GATNNNNATC 1 cut(s) 1104
BseBI CCWGG 1 cut(s) 57
BseDI CCNNGG 1 cut(s) 55
BseGI GGATG 4 cut(s) 65, 757, 1243, 1717
BseJI GATNNNNATC 1 cut(s) 1104
BseLI CCNNNNNNNGG 3 cut(s) 1810, 2172, 2206
BseMI GCAATG 2 cut(s) 1710, 1824
BseMII CTCAG 2 cut(s) 1209, 2245
BseNI ACTGG 5 cut(s) 94, 1403, 1907, 2102, 2444
BseRI GAGGAG 3 cut(s) 210, 948, 2143
BseSI GKGCMC 2 cut(s) 363, 1676
BseXI GCAGC 6 cut(s) 518, 1399, 1402, 1826, 1942, 2256
BseYI CCCAGC 2 cut(s) 691, 1361
BsgI GTGCAG 1 cut(s) 2273
BshFI GGCC 2 cut(s) 361, 2138
BshNI GGYRCC 2 cut(s) 965, 1671
BsiHKAI GWGCWC 1 cut(s) 1350
BsiHKCI CYCGRG 2 cut(s) 304, 549
BslFI GGGAC 5 cut(s) 107, 183, 200, 674, 1191
BslI CCNNNNNNNGG 3 cut(s) 1810, 2172, 2206
BsmAI GTCTC 3 cut(s) 1407, 2145, 2444
BsmFI GGGAC 5 cut(s) 107, 183, 200, 674, 1191
BsnI GGCC 2 cut(s) 361, 2138
Bso31I GGTCTC 1 cut(s) 1407
BsoBI CYCGRG 2 cut(s) 304, 549
Bsp119I TTCGAA 1 cut(s) 1655
Bsp120I GGGCCC 1 cut(s) 359
Bsp1286I GDGCHC 4 cut(s) 27, 363, 1350, 1676
Bsp1407I TGTACA 1 cut(s) 1200
BspACI CCGC 5 cut(s) 618, 1537, 1772, 2166, 2504
BspANI GGCC 2 cut(s) 361, 2138
BspCNI CTCAG 2 cut(s) 1208, 2244
BspHI TCATGA 1 cut(s) 1048
BspPI GGATC 5 cut(s) 856, 1705, 1947, 2396, 2409
BspQI GCTCTTC 1 cut(s) 1338
BspT104I TTCGAA 1 cut(s) 1655
BspT107I GGYRCC 2 cut(s) 965, 1671
BspTI CTTAAG 1 cut(s) 1283
BspTNI GGTCTC 1 cut(s) 1407
BsrBI CCGCTC 1 cut(s) 1774
BsrDI GCAATG 2 cut(s) 1710, 1824
BsrGI TGTACA 1 cut(s) 1200
BsrI ACTGG 5 cut(s) 94, 1403, 1907, 2102, 2444
BssECI CCNNGG 1 cut(s) 55
BssNAI GTATAC 1 cut(s) 1545
Bst1107I GTATAC 1 cut(s) 1545
Bst2UI CCWGG 1 cut(s) 57
Bst4CI ACNGT 7 cut(s) 71, 496, 566, 908, 936, 1205, 2431
Bst6I CTCTTC 5 cut(s) 821, 1149, 1338, 1361, 1953
BstAFI CTTAAG 1 cut(s) 1283
BstAPI GCANNNNNTGC 1 cut(s) 2216
BstAUI TGTACA 1 cut(s) 1200
BstBI TTCGAA 1 cut(s) 1655
BstC8I GCNNGC 2 cut(s) 868, 1420
BstDEI CTNAG 6 cut(s) 250, 1195, 2231, 2308, 2324, 2360
BstF5I GGATG 4 cut(s) 65, 757, 1243, 1717
BstHHI GCGC 1 cut(s) 1113
BstMAI GTCTC 3 cut(s) 1407, 2145, 2444
BstMWI GCNNNNNNNGC 7 cut(s) 641, 876, 1321, 2144, 2196, 2216, 2320
BstNI CCWGG 1 cut(s) 57
BstSCI CCNGG 1 cut(s) 55
BstSFI CTRYAG 2 cut(s) 1590, 1987
BstSLI GKGCMC 2 cut(s) 363, 1676
BstV1I GCAGC 6 cut(s) 518, 1399, 1402, 1826, 1942, 2256
BstV2I GAAGAC 4 cut(s) 1731, 2442, 2475, 2559
BstX2I RGATCY 4 cut(s) 1487, 1939, 2119, 2401
BstYI RGATCY 4 cut(s) 1487, 1939, 2119, 2401
BstZ17I GTATAC 1 cut(s) 1545
BsuI GTATCC 1 cut(s) 1372
BsuRI GGCC 2 cut(s) 361, 2138
BtrI CACGTC 1 cut(s) 1516
BtsCI GGATG 4 cut(s) 65, 757, 1243, 1717
BtsI GCAGTG 1 cut(s) 251
BtsIMutI CAGTG 5 cut(s) 67, 251, 1203, 2261, 2427
Cac8I GCNNGC 2 cut(s) 868, 1420
CaiI CAGNNNCTG 1 cut(s) 2453
CciI TCATGA 1 cut(s) 1048
CfoI GCGC 1 cut(s) 1113
Cfr13I GGNCC 5 cut(s) 94, 197, 214, 359, 360
Csp6I GTAC 6 cut(s) 554, 1201, 1396, 2101, 2347, 2461
CviAII CATG 7 cut(s) 224, 238, 1049, 1114, 1952, 2390, 2474
CviQI GTAC 6 cut(s) 554, 1201, 1396, 2101, 2347, 2461
DdeI CTNAG 6 cut(s) 250, 1195, 2231, 2308, 2324, 2360
DraI TTTAAA 2 cut(s) 166, 2064
DraIII CACNNNGTG 1 cut(s) 2014
EaeI YGGCCR 1 cut(s) 2136
Eam1104I CTCTTC 5 cut(s) 821, 1149, 1338, 1361, 1953
EarI CTCTTC 5 cut(s) 821, 1149, 1338, 1361, 1953
EciI GGCGGA 1 cut(s) 633
Eco24I GRGCYC 2 cut(s) 27, 363
Eco31I GGTCTC 1 cut(s) 1407
Eco47I GGWCC 3 cut(s) 94, 197, 214
Eco57I CTGAAG 1 cut(s) 2571
Eco88I CYCGRG 2 cut(s) 304, 549
EcoO109I RGGNCCY 3 cut(s) 94, 214, 359
EcoRII CCWGG 1 cut(s) 55
EcoT38I GRGCYC 2 cut(s) 27, 363
FaeI CATG 7 cut(s) 227, 241, 1052, 1117, 1955, 2393, 2477
FaqI GGGAC 5 cut(s) 107, 183, 200, 674, 1191
FatI CATG 7 cut(s) 223, 237, 1048, 1113, 1951, 2389, 2473
FauI CCCGC 1 cut(s) 2173
FauNDI CATATG 2 cut(s) 921, 2185
FbaI TGATCA 2 cut(s) 208, 1752
FblI GTMKAC 3 cut(s) 714, 1544, 2180
Fnu4HI GCNGC 6 cut(s) 507, 1413, 1416, 1815, 1956, 2245
FokI GGATG 4 cut(s) 72, 744, 1250, 1724
FriOI GRGCYC 2 cut(s) 27, 363
Fsp4HI GCNGC 6 cut(s) 507, 1413, 1416, 1815, 1956, 2245
FspBI CTAG 9 cut(s) 326, 479, 536, 1148, 1485, 1497, 2148, 2424, 2465
GlaI GCGC 1 cut(s) 1112
GluI GCNGC 6 cut(s) 507, 1413, 1416, 1815, 1956, 2245
GsaI CCCAGC 2 cut(s) 695, 1365
GsuI CTGGAG 1 cut(s) 1245
HaeIII GGCC 2 cut(s) 361, 2138
HhaI GCGC 1 cut(s) 1113
Hin1II CATG 7 cut(s) 227, 241, 1052, 1117, 1955, 2393, 2477
Hin6I GCGC 1 cut(s) 1111
HinP1I GCGC 1 cut(s) 1111
HincII GTYRAC 2 cut(s) 74, 514
HindII GTYRAC 2 cut(s) 74, 514
HphI GGTGA 6 cut(s) 164, 434, 899, 913, 1747, 2026
Hpy188I TCNGA 7 cut(s) 432, 574, 1168, 1431, 1527, 1693, 2271
Hpy99I CGWCG 1 cut(s) 1520
HpyAV CCTTC 7 cut(s) 1205, 1561, 1661, 1688, 1804, 2485, 2612
HpyCH4III ACNGT 7 cut(s) 71, 496, 566, 908, 936, 1205, 2431
HpyCH4IV ACGT 3 cut(s) 1382, 1515, 2212
HpyF10VI GCNNNNNNNGC 7 cut(s) 641, 876, 1321, 2144, 2196, 2216, 2320
HpyF3I CTNAG 6 cut(s) 250, 1195, 2231, 2308, 2324, 2360
HpySE526I ACGT 3 cut(s) 1382, 1515, 2212
Hsp92II CATG 7 cut(s) 227, 241, 1052, 1117, 1955, 2393, 2477
HspAI GCGC 1 cut(s) 1111
KflI GGGWCCC 1 cut(s) 94
Ksp22I TGATCA 2 cut(s) 208, 1752
LguI GCTCTTC 1 cut(s) 1338
LmnI GCTCC 3 cut(s) 700, 961, 1779
Lsp1109I GCAGC 6 cut(s) 518, 1399, 1402, 1826, 1942, 2256
LweI GCATC 7 cut(s) 275, 994, 1228, 1255, 1524, 2001, 2323
MaeI CTAG 9 cut(s) 326, 479, 536, 1148, 1485, 1497, 2148, 2424, 2465
MaeII ACGT 3 cut(s) 1382, 1515, 2212
MaeIII GTNAC 3 cut(s) 1492, 1576, 1648
MbiI CCGCTC 1 cut(s) 1774
MfeI CAATTG 3 cut(s) 1008, 1157, 2603
MflI RGATCY 4 cut(s) 1487, 1939, 2119, 2401
MhlI GDGCHC 4 cut(s) 27, 363, 1350, 1676
MlyI GAGTC 4 cut(s) 295, 316, 509, 612
MmeI TCCRAC 5 cut(s) 334, 1043, 1275, 1285, 2095
MslI CAYNNNNRTG 1 cut(s) 2394
MspA1I CMGCKG 1 cut(s) 2168
MspCI CTTAAG 1 cut(s) 1283
MspR9I CCNGG 1 cut(s) 57
MunI CAATTG 3 cut(s) 1008, 1157, 2603
MvaI CCWGG 1 cut(s) 57
MwoI GCNNNNNNNGC 7 cut(s) 641, 876, 1321, 2144, 2196, 2216, 2320
NdeI CATATG 2 cut(s) 921, 2185
NlaIII CATG 7 cut(s) 227, 241, 1052, 1117, 1955, 2393, 2477
NspV TTCGAA 1 cut(s) 1655
PaeR7I CTCGAG 1 cut(s) 549
PagI TCATGA 1 cut(s) 1048
PciSI GCTCTTC 1 cut(s) 1338
PfeI GAWTC 6 cut(s) 373, 559, 916, 1279, 2266, 2272
PkrI GCNGC 6 cut(s) 508, 1414, 1417, 1816, 1957, 2246
PleI GAGTC 4 cut(s) 294, 315, 509, 611
PpsI GAGTC 4 cut(s) 294, 315, 509, 611
PpuMI RGGWCCY 2 cut(s) 94, 214
PshBI ATTAAT 1 cut(s) 156
PsiI TTATAA 2 cut(s) 1253, 2514
Psp5II RGGWCCY 2 cut(s) 94, 214
Psp6I CCWGG 1 cut(s) 55
PspFI CCCAGC 2 cut(s) 691, 1361
PspGI CCWGG 1 cut(s) 55
PspOMI GGGCCC 1 cut(s) 359
PspPI GGNCC 5 cut(s) 94, 197, 214, 359, 360
PspPPI RGGWCCY 2 cut(s) 94, 214
PspXI VCTCGAGB 1 cut(s) 549
PstNI CAGNNNCTG 1 cut(s) 2453
PsuI RGATCY 4 cut(s) 1487, 1939, 2119, 2401
RsaI GTAC 6 cut(s) 555, 1202, 1397, 2102, 2348, 2462
RsaNI GTAC 6 cut(s) 554, 1201, 1396, 2101, 2347, 2461
RseI CAYNNNNRTG 1 cut(s) 2394
SapI GCTCTTC 1 cut(s) 1338
SatI GCNGC 6 cut(s) 507, 1413, 1416, 1815, 1956, 2245
Sau96I GGNCC 5 cut(s) 94, 197, 214, 359, 360
SchI GAGTC 4 cut(s) 295, 316, 509, 612
ScrFI CCNGG 1 cut(s) 57
SduI GDGCHC 4 cut(s) 27, 363, 1350, 1676
SfaNI GCATC 7 cut(s) 275, 994, 1228, 1255, 1524, 2001, 2323
SfcI CTRYAG 2 cut(s) 1590, 1987
Sfr274I CTCGAG 1 cut(s) 549
SfuI TTCGAA 1 cut(s) 1655
SinI GGWCC 3 cut(s) 94, 197, 214
SlaI CTCGAG 1 cut(s) 549
SmiMI CAYNNNNRTG 1 cut(s) 2394
SmlI CTYRAG 4 cut(s) 446, 549, 1283, 1436
SmoI CTYRAG 4 cut(s) 446, 549, 1283, 1436
SsiI CCGC 5 cut(s) 618, 1537, 1772, 2166, 2504
SspI AATATT 2 cut(s) 1182, 1909
SspMI CTAG 9 cut(s) 326, 479, 536, 1148, 1485, 1497, 2148, 2424, 2465
StyD4I CCNGG 1 cut(s) 55
TaaI ACNGT 7 cut(s) 71, 496, 566, 908, 936, 1205, 2431
TaiI ACGT 3 cut(s) 1385, 1518, 2215
TaqI TCGA 5 cut(s) 229, 550, 580, 1655, 1846
TatI WGTACW 3 cut(s) 1200, 1395, 2346
TfiI GAWTC 6 cut(s) 373, 559, 916, 1279, 2266, 2272
TscAI CASTG 5 cut(s) 74, 251, 1203, 2261, 2434
TseI GCWGC 6 cut(s) 506, 1412, 1415, 1814, 1955, 2244
TspGWI ACGGA 1 cut(s) 2610
TspRI CASTG 5 cut(s) 74, 251, 1203, 2261, 2434
Vha464I CTTAAG 1 cut(s) 1283
VpaK11BI GGWCC 3 cut(s) 94, 197, 214
VspI ATTAAT 1 cut(s) 156
XapI RAATTY 4 cut(s) 948, 1189, 1255, 1628
XbaI TCTAGA 1 cut(s) 478
XhoI CTCGAG 1 cut(s) 549
XmiI GTMKAC 3 cut(s) 714, 1544, 2180
XspI CTAG 9 cut(s) 326, 479, 536, 1148, 1485, 1497, 2148, 2424, 2465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.