Rh2AG504100

Protein of unknown function (DUF 659)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000444
Physical Location & Seq
Reverse (-)
72701883 .. 72707386
5504 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG504100.1

Sequence Viewer

Length: 2559 bp
ATGAGGCGTCGGGGAATCTGGAGTACGATTTCTATTGGAACCCAAAAAAGTGAAGGCAGAGACCATTGTGAGGGTGGAGGGATTAATAGGTTTAAATCTCACCTTGCTGGTAGAAAAGGAAATGGTCCCATTTGTGATCAGGTCCCTCCTCATGTTCGAGTTTCCATGTTGCAGTGCTTAGATGAAAAAATTGCATCTTTAAGGCACAGAAAGAGTCAAATGGCTGTGAACCCGAGTCGTAGTTTTAGTGAACTAGACAATGTGTTTGCTGAAAATGAAGTTGGAGGGCCCAATTTGATGAATCAAGAGGAAGATGTGGGAATGAGTGTTGATAATGGGATTAGGGTTGGTGATAATCTGACTGATGTGCCTCTTGAGATTGATGATTGTTTTAGGAGTGATGGTCTAGAGGGATTGACTACTGTGCCTCTTGCAGCAGTTGACTCGTATAAGGGTAATGCTCTAGGGAGAAAAGCTGGAGTACCGAATCACAGTTTTTCGGAAAATCGAGAGGTGGGTGTTGATAGACGAGTAGGGTGGAGAGGCGGAACTTCTTTTGTAGCTACTACTGCTGGTTTCGGTTCTGGTTCTGCTAATGCTACTAAATTGAGTTATGTCCCAGCGCCTATTCGTAGTGAGGTAGACAAGCCATTTTACGAAAACACGCAAGGAAGATCAGTTGGTCATCCCAATTCATATTTGTTTGAAAATGAAACAGATGTTGGCACAAGTAATACAAATGGGAAGAACAGGAAGAGGGTAAGAGATGAAAATGGATCAATGGTTGCTAATGCTGGCACTATTGGAAATTATGGTGAAGTTGAAAAGGTGAACAGTCAGCAGATTCATATGGCAATAGGACGGTTCCTATATGAAATTCAGGCTCCTCTGGGTGCCGTGAAGAACTCTGTTTATTTTCAGCCAATGATTGATGCAATTGCTTCTGGGGGAATGGAGAGTAAACCACCCTCGTATCATGATCTTCGGGGTTGGATATTAAATAATGTGGTTGAAGAAGTAAAGAATGATATTCATCAGCACATGAATACTTGGGAAAGGAATGGTTGCTCTCTTCTAGTAAACCAATTGAACTCTGAAAAGGGTAGAATATTGCTAAATTTCTCAGTGTACAGTCCCGAAGGAACAACATATTTGAAATCTGTGGATGCTTCCTCATTTATAAATTCTCCAGATGCTTTGTATGAGATTCTTAAGCAAGTGTTGGAAGAAGTTGGAGTTGGGCGTGTTTTGCAAGTAATTACAAATAGTGAAGAGCACTATGTTGTTGCTGGGAAGAGGTTGATGGATACGTTTCCTACACTGTACTGGTCTCCCTGTGCTGCTGCTTGCATAAATCTGATACTTGAGGATTTTGGAAAAGTTGAGTGGATAAAATCTATTATAGAACAGGCTAGATCTGTTACAAGATTTATCTATAAACATGTCGTCATTCTGAATATGATGCGGAGGTATACTTTTGGAAATGACATTGTGAAGGTGGGAGTAACTCGGTTTGCTACAGACTTTATGACTTTGAAACAAATGGCTGACCTTAAATTCAATTTGCAGACTATGGTTACTTCAAAAGAATGGGAAGGGTGCCCTTATTCTCAAACATCAGAAGGATCAGCAATGCTGGATGTAATAAGTAATCACACATTTTGGTCTTCGTGCATTATGATCACCCGATTAACAAATCCGCTCCTGCGAGTTTTGAGAATTGTTGGTAGCCAGAAGAAGGCAGCAATGGGATATGTATTTGGAGGAATGTATCGAGCAAAAGAAACAATCAAGAGAGAACTTGTCAAGAAAGAAGAATATATGGCTTACTGGAATATTATAGATTACAGGTGGCAAAAATTATGGGATCTTCCTCTTCATGCTGCTGGTTTTTACCTTAATCCCAAGTTTTTCTATAGCATCAAGGGAGAAATGCACAAGGTGATTATGTCAAAAATGCTTGACTGCATAGAGAAATTGGTTCCAGATTTAAAAGTTCAAGATGAAATTAGCAAAGAGATAAACTTGTACAAAAATGCTGTTGGAGATCTGGGGAGGAATTTGGCCATTAGAGCTAGAGACACTCTGCTTCCCGCTGAATGGTGGTCTACATATGGCGGTGGTTGCCCAAATATGGCACGTTTTGCAGTTCATATTCTCAGTCAAACTTGCAGCTTAATTCAGTGCAAGGAGAATCAGATTCCTTTTGACCAACTGCACAAGACAAGGAACAGCTTAGAGCATCAACGGCTTAGTGATTTTGTCTTTGTTCAGTACAACTTGCAACTAAGACAGATGGTTCATAAGAACAAAGAGCATGAGTATGTGGATCCTATATCATTTGACAACACTAGCACTGTTGAAGACTGGATAACAGAGACTGAAATGTACCTAGAAGACAATGAAAATACTGATTGGAAGGCACTTGAACCGCCCTCTTATAATTCGAGGCTTTTAGAACTTTCAGTTGATGAAGCTGAAGACTTGGGTTCAGGGTTTGATGATAACGAGATTTTCTTAAACGGATTGCAATTGGTTAAAGAAGAAGGCAGAACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF659 Dimer_Tnp_hAT zf-BED

Protein Analysis

852

Amino Acids

96.19

Weight (kDa)

5.99

Isoelectric Point (pI)

38.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF659 PF04937 323 - 474 1.8e-55 Domain of unknown function (DUF659)
Dimer_Tnp_hAT PF05699 684 - 761 4.4e-07 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000444)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22220 AT3G22220 AT3G22220 AT3G22220 AT4G15020 AT4G15020
fragaria_vesca FvH4_6g39601 FvH4_6g39601 FvH4_6g39601 FvH4_6g39601 FvH4_6g39601 FvH4_7g22891 FvH4_7g22891 FvH4_7g22891
malus_domestica MD01G1137200.v1.1 MD02G1265900.v1.1 MD07G1202100.v1.1 MD09G1137900.v1.1 MD09G1138100.v1.1 MD17G1128400.v1.1
prunus_persica Prupe.2G058600_v2.0.a1 Prupe.2G058600_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1 Prupe.3G186900_v2.0.a1
pyrus_communis pycom01g15800 pycom01g15810 pycom01g15840 pycom02g22730 pycom07g18920 pycom07g18930 pycom09g05900 pycom17g12060
rosa_chinensis RchiOBHm_Chr1g0368051 RchiOBHm_Chr2g0153631 RchiOBHm_Chr2g0153641 RchiOBHm_Chr7g0237231
rosa_laevigata RLG00000001022 RLG00000020718
rosa_multiflora Rmu_sc0002117.1_g000006 Rmu_sc0004952.1_g000008 Rmu_sc0005823.1_g000001 Rmu_sc0013273.1_g000001 Rmu_sc0028071.1_g000001
rosa_roxburghii Rroxscaffold_1G00016080 Rroxscaffold_2G00094830 Rroxscaffold_4G00288900
rosa_rugosa Rorug01G0338600 Rorug01G0338700 Rorug02G0441100 Rorug02G0441200 Rorug04G0167900 Rorug07G0273200 Rorug07G0273300 Rorug07G0297100 Rorug07G0297200 Rorug07G0297300
rosa_samantha Rh1AG102500 Rh1AG102600 Rh1AG102700 Rh1AG345600 Rh1BG307900 Rh1CG323500 Rh1DG340000 Rh2AG504100 Rh2BG514800 Rh2CG490100 Rh2DG526900 Rh7AG451500 Rh7AG451700 Rh7AG459100 Rh7AG459200 Rh7BG400700 Rh7BG400800 Rh7BG421300 Rh7BG421400 Rh7BG423400 Rh7BG423500 Rh7BG423800 Rh7BG423900 Rh7CG471000 Rh7CG471100 Rh7CG471200
rosa_wichuraiana Rw1G030760 Rw2G041430 Rw5G036050 Rw7G038020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1181, 2442
AccB1I GGYRCC 2 cut(s) 893, 1599
AccBSI CCGCTC 1 cut(s) 1702
AccI GTMKAC 3 cut(s) 642, 1472, 2108
AciI CCGC 6 cut(s) 546, 1465, 1700, 2094, 2118, 2432
AclWI GGATC 5 cut(s) 784, 1633, 1875, 2324, 2337
AcoI YGGCCR 1 cut(s) 2064
AcsI RAATTY 5 cut(s) 876, 1117, 1183, 1556, 2059
AcuI CTGAAG 1 cut(s) 2499
AcyI GRCGYC 1 cut(s) 7
AdeI CACNNNGTG 1 cut(s) 1942
AfaI GTAC 7 cut(s) 25, 483, 1130, 1325, 2030, 2276, 2390
AfiI CCNNNNNNNGG 4 cut(s) 70, 1738, 2100, 2134
AflII CTTAAG 1 cut(s) 1211
AflIII ACRYGT 1 cut(s) 1441
AjuI GAANNNNNNNTTGG 6 cut(s) 264, 296, 705, 737, 1221, 1253
AluBI AGCT 6 cut(s) 476, 563, 2075, 2175, 2235, 2477
AluI AGCT 6 cut(s) 476, 563, 2075, 2175, 2235, 2477
Alw21I GWGCWC 1 cut(s) 1278
Alw26I GTCTC 4 cut(s) 54, 1335, 2073, 2372
AlwI GGATC 5 cut(s) 784, 1633, 1875, 2324, 2337
AlwNI CAGNNNCTG 1 cut(s) 2381
Ama87I CYCGRG 1 cut(s) 232
AoxI GGCC 2 cut(s) 287, 2064
ApaI GGGCCC 1 cut(s) 291
ApeKI GCWGC 6 cut(s) 434, 1340, 1343, 1742, 1883, 2172
ApoI RAATTY 5 cut(s) 876, 1117, 1183, 1556, 2059
ArsI GACNNNNNNTTYG 2 cut(s) 248, 280
AseI ATTAAT 1 cut(s) 84
AspLEI GCGC 1 cut(s) 625
AspS9I GGNCC 4 cut(s) 125, 142, 287, 288
AsuHPI GGTGA 6 cut(s) 92, 362, 827, 841, 1675, 1954
AvaI CYCGRG 1 cut(s) 232
AvaII GGWCC 2 cut(s) 125, 142
BaeGI GKGCMC 2 cut(s) 291, 1604
BaeI ACNNNNGTAYC 2 cut(s) 956, 989
BalI TGGCCA 1 cut(s) 2066
BamHI GGATCC 1 cut(s) 2329
BanI GGYRCC 2 cut(s) 893, 1599
BanII GRGCYC 1 cut(s) 291
BbsI GAAGAC 4 cut(s) 1659, 2370, 2403, 2487
Bbv12I GWGCWC 1 cut(s) 1278
BbvI GCAGC 6 cut(s) 446, 1327, 1330, 1754, 1870, 2184
BccI CCATC 3 cut(s) 395, 1297, 2290
BceAI ACGGC 2 cut(s) 881, 2264
BcgI CGANNNNNNTGC 2 cut(s) 426, 460
BciVI GTATCC 1 cut(s) 1300
BclI TGATCA 2 cut(s) 136, 1680
BcoDI GTCTC 4 cut(s) 54, 1335, 2073, 2372
BfaI CTAG 8 cut(s) 254, 407, 464, 1076, 1413, 2076, 2352, 2393
BfmI CTRYAG 2 cut(s) 1518, 1915
BfoI RGCGCY 1 cut(s) 626
BfrI CTTAAG 1 cut(s) 1211
BfuI GTATCC 1 cut(s) 1300
BglII AGATCT 2 cut(s) 1415, 2047
BisI GCNGC 6 cut(s) 435, 1341, 1344, 1743, 1884, 2173
BlsI GCNGC 6 cut(s) 436, 1342, 1345, 1744, 1885, 2174
Bme18I GGWCC 2 cut(s) 125, 142
BmeT110I CYCGRG 1 cut(s) 232
BmgT120I GGNCC 4 cut(s) 125, 142, 287, 288
BmsI GCATC 7 cut(s) 203, 922, 1156, 1183, 1452, 1929, 2251
BpiI GAAGAC 4 cut(s) 1659, 2370, 2403, 2487
BpmI CTGGAG 3 cut(s) 40, 498, 1173
BpuEI CTTGAG 2 cut(s) 395, 1385
BsaBI GATNNNNATC 1 cut(s) 1032
BsaHI GRCGYC 1 cut(s) 7
BsaI GGTCTC 2 cut(s) 54, 1335
BsaXI ACNNNNNCTCC 2 cut(s) 388, 418
Bsc4I CCNNNNNNNGG 4 cut(s) 70, 1738, 2100, 2134
Bse1I ACTGG 3 cut(s) 1331, 1835, 2372
Bse3DI GCAATG 2 cut(s) 1638, 1752
Bse8I GATNNNNATC 1 cut(s) 1032
BseGI GGATG 3 cut(s) 685, 1171, 1645
BseJI GATNNNNATC 1 cut(s) 1032
BseLI CCNNNNNNNGG 4 cut(s) 70, 1738, 2100, 2134
BseMI GCAATG 2 cut(s) 1638, 1752
BseMII CTCAG 2 cut(s) 1137, 2173
BseNI ACTGG 3 cut(s) 1331, 1835, 2372
BseRI GAGGAG 2 cut(s) 138, 876
BseSI GKGCMC 2 cut(s) 291, 1604
BseXI GCAGC 6 cut(s) 446, 1327, 1330, 1754, 1870, 2184
BseYI CCCAGC 2 cut(s) 619, 1289
BsgI GTGCAG 1 cut(s) 2201
BshFI GGCC 2 cut(s) 289, 2066
BshNI GGYRCC 2 cut(s) 893, 1599
BsiHKAI GWGCWC 1 cut(s) 1278
BsiHKCI CYCGRG 1 cut(s) 232
BslFI GGGAC 4 cut(s) 111, 128, 602, 1119
BslI CCNNNNNNNGG 4 cut(s) 70, 1738, 2100, 2134
BsmAI GTCTC 4 cut(s) 54, 1335, 2073, 2372
BsmFI GGGAC 4 cut(s) 111, 128, 602, 1119
BsnI GGCC 2 cut(s) 289, 2066
Bso31I GGTCTC 2 cut(s) 54, 1335
BsoBI CYCGRG 1 cut(s) 232
Bsp120I GGGCCC 1 cut(s) 287
Bsp1286I GDGCHC 3 cut(s) 291, 1278, 1604
Bsp1407I TGTACA 2 cut(s) 1128, 2028
BspACI CCGC 6 cut(s) 546, 1465, 1700, 2094, 2118, 2432
BspANI GGCC 2 cut(s) 289, 2066
BspCNI CTCAG 2 cut(s) 1136, 2172
BspHI TCATGA 1 cut(s) 976
BspPI GGATC 5 cut(s) 784, 1633, 1875, 2324, 2337
BspQI GCTCTTC 1 cut(s) 1266
BspT107I GGYRCC 2 cut(s) 893, 1599
BspTI CTTAAG 1 cut(s) 1211
BspTNI GGTCTC 2 cut(s) 54, 1335
BsrBI CCGCTC 1 cut(s) 1702
BsrDI GCAATG 2 cut(s) 1638, 1752
BsrGI TGTACA 2 cut(s) 1128, 2028
BsrI ACTGG 3 cut(s) 1331, 1835, 2372
BssNAI GTATAC 1 cut(s) 1473
BssNI GRCGYC 1 cut(s) 7
Bst1107I GTATAC 1 cut(s) 1473
Bst4CI ACNGT 7 cut(s) 424, 494, 836, 864, 1133, 1323, 2359
Bst6I CTCTTC 5 cut(s) 749, 1077, 1266, 1289, 1881
BstACI GRCGYC 1 cut(s) 7
BstAFI CTTAAG 1 cut(s) 1211
BstAPI GCANNNNNTGC 1 cut(s) 2144
BstAUI TGTACA 2 cut(s) 1128, 2028
BstC8I GCNNGC 2 cut(s) 796, 1348
BstDEI CTNAG 6 cut(s) 178, 1123, 2159, 2236, 2252, 2288
BstF5I GGATG 3 cut(s) 685, 1171, 1645
BstH2I RGCGCY 1 cut(s) 626
BstHHI GCGC 1 cut(s) 625
BstMAI GTCTC 4 cut(s) 54, 1335, 2073, 2372
BstMWI GCNNNNNNNGC 6 cut(s) 569, 1249, 2072, 2124, 2144, 2248
BstNSI RCATGY 1 cut(s) 1445
BstSFI CTRYAG 2 cut(s) 1518, 1915
BstSLI GKGCMC 2 cut(s) 291, 1604
BstV1I GCAGC 6 cut(s) 446, 1327, 1330, 1754, 1870, 2184
BstV2I GAAGAC 4 cut(s) 1659, 2370, 2403, 2487
BstX2I RGATCY 4 cut(s) 1415, 1867, 2047, 2329
BstYI RGATCY 4 cut(s) 1415, 1867, 2047, 2329
BstZ17I GTATAC 1 cut(s) 1473
BsuI GTATCC 1 cut(s) 1300
BsuRI GGCC 2 cut(s) 289, 2066
BtsCI GGATG 3 cut(s) 685, 1171, 1645
BtsI GCAGTG 1 cut(s) 179
BtsIMutI CAGTG 5 cut(s) 179, 1131, 1319, 2189, 2355
Cac8I GCNNGC 2 cut(s) 796, 1348
CaiI CAGNNNCTG 1 cut(s) 2381
CciI TCATGA 1 cut(s) 976
CfoI GCGC 1 cut(s) 625
Cfr13I GGNCC 4 cut(s) 125, 142, 287, 288
Csp6I GTAC 7 cut(s) 24, 482, 1129, 1324, 2029, 2275, 2389
CviAII CATG 7 cut(s) 152, 166, 977, 1042, 1442, 1880, 2318
CviQI GTAC 7 cut(s) 24, 482, 1129, 1324, 2029, 2275, 2389
DdeI CTNAG 6 cut(s) 178, 1123, 2159, 2236, 2252, 2288
DraI TTTAAA 2 cut(s) 94, 1992
DraIII CACNNNGTG 1 cut(s) 1942
EaeI YGGCCR 1 cut(s) 2064
Eam1104I CTCTTC 5 cut(s) 749, 1077, 1266, 1289, 1881
EarI CTCTTC 5 cut(s) 749, 1077, 1266, 1289, 1881
EciI GGCGGA 1 cut(s) 561
Eco24I GRGCYC 1 cut(s) 291
Eco31I GGTCTC 2 cut(s) 54, 1335
Eco47I GGWCC 2 cut(s) 125, 142
Eco57I CTGAAG 1 cut(s) 2499
Eco88I CYCGRG 1 cut(s) 232
EcoO109I RGGNCCY 2 cut(s) 142, 287
EcoT38I GRGCYC 1 cut(s) 291
FaeI CATG 7 cut(s) 155, 169, 980, 1045, 1445, 1883, 2321
FaqI GGGAC 4 cut(s) 111, 128, 602, 1119
FatI CATG 7 cut(s) 151, 165, 976, 1041, 1441, 1879, 2317
FauI CCCGC 1 cut(s) 2101
FauNDI CATATG 2 cut(s) 849, 2113
FbaI TGATCA 2 cut(s) 136, 1680
FblI GTMKAC 3 cut(s) 642, 1472, 2108
Fnu4HI GCNGC 6 cut(s) 435, 1341, 1344, 1743, 1884, 2173
FokI GGATG 3 cut(s) 672, 1178, 1652
FriOI GRGCYC 1 cut(s) 291
Fsp4HI GCNGC 6 cut(s) 435, 1341, 1344, 1743, 1884, 2173
FspBI CTAG 8 cut(s) 254, 407, 464, 1076, 1413, 2076, 2352, 2393
GlaI GCGC 1 cut(s) 624
GluI GCNGC 6 cut(s) 435, 1341, 1344, 1743, 1884, 2173
GsaI CCCAGC 2 cut(s) 623, 1293
GsuI CTGGAG 3 cut(s) 40, 498, 1173
HaeII RGCGCY 1 cut(s) 626
HaeIII GGCC 2 cut(s) 289, 2066
HhaI GCGC 1 cut(s) 625
Hin1I GRCGYC 1 cut(s) 7
Hin1II CATG 7 cut(s) 155, 169, 980, 1045, 1445, 1883, 2321
Hin6I GCGC 1 cut(s) 623
HinP1I GCGC 1 cut(s) 623
HincII GTYRAC 1 cut(s) 442
HindII GTYRAC 1 cut(s) 442
HphI GGTGA 6 cut(s) 92, 362, 827, 841, 1675, 1954
Hpy188I TCNGA 7 cut(s) 360, 502, 1096, 1359, 1455, 1621, 2199
Hpy99I CGWCG 1 cut(s) 12
HpyAV CCTTC 8 cut(s) 47, 1133, 1489, 1589, 1616, 1732, 2413, 2540
HpyCH4III ACNGT 7 cut(s) 424, 494, 836, 864, 1133, 1323, 2359
HpyCH4IV ACGT 2 cut(s) 1310, 2140
HpyF10VI GCNNNNNNNGC 6 cut(s) 569, 1249, 2072, 2124, 2144, 2248
HpyF3I CTNAG 6 cut(s) 178, 1123, 2159, 2236, 2252, 2288
HpySE526I ACGT 2 cut(s) 1310, 2140
Hsp92I GRCGYC 1 cut(s) 7
Hsp92II CATG 7 cut(s) 155, 169, 980, 1045, 1445, 1883, 2321
HspAI GCGC 1 cut(s) 623
Ksp22I TGATCA 2 cut(s) 136, 1680
LguI GCTCTTC 1 cut(s) 1266
LmnI GCTCC 2 cut(s) 889, 1707
Lsp1109I GCAGC 6 cut(s) 446, 1327, 1330, 1754, 1870, 2184
LweI GCATC 7 cut(s) 203, 922, 1156, 1183, 1452, 1929, 2251
MaeI CTAG 8 cut(s) 254, 407, 464, 1076, 1413, 2076, 2352, 2393
MaeII ACGT 2 cut(s) 1310, 2140
MaeIII GTNAC 3 cut(s) 1420, 1504, 1576
MbiI CCGCTC 1 cut(s) 1702
MfeI CAATTG 3 cut(s) 936, 1085, 2531
MflI RGATCY 4 cut(s) 1415, 1867, 2047, 2329
MhlI GDGCHC 3 cut(s) 291, 1278, 1604
MlsI TGGCCA 1 cut(s) 2066
MluNI TGGCCA 1 cut(s) 2066
MlyI GAGTC 3 cut(s) 223, 244, 437
MmeI TCCRAC 5 cut(s) 262, 971, 1203, 1213, 2023
Mox20I TGGCCA 1 cut(s) 2066
MscI TGGCCA 1 cut(s) 2066
MslI CAYNNNNRTG 1 cut(s) 2322
Msp20I TGGCCA 1 cut(s) 2066
MspA1I CMGCKG 1 cut(s) 2096
MspCI CTTAAG 1 cut(s) 1211
MunI CAATTG 3 cut(s) 936, 1085, 2531
MwoI GCNNNNNNNGC 6 cut(s) 569, 1249, 2072, 2124, 2144, 2248
NdeI CATATG 2 cut(s) 849, 2113
NlaIII CATG 7 cut(s) 155, 169, 980, 1045, 1445, 1883, 2321
NspI RCATGY 1 cut(s) 1445
PagI TCATGA 1 cut(s) 976
PciI ACATGT 1 cut(s) 1441
PciSI GCTCTTC 1 cut(s) 1266
PfeI GAWTC 7 cut(s) 15, 301, 487, 844, 1207, 2194, 2200
PkrI GCNGC 6 cut(s) 436, 1342, 1345, 1744, 1885, 2174
PleI GAGTC 3 cut(s) 222, 243, 437
PpsI GAGTC 3 cut(s) 222, 243, 437
PpuMI RGGWCCY 1 cut(s) 142
PscI ACATGT 1 cut(s) 1441
PshBI ATTAAT 1 cut(s) 84
PsiI TTATAA 2 cut(s) 1181, 2442
Psp5II RGGWCCY 1 cut(s) 142
PspFI CCCAGC 2 cut(s) 619, 1289
PspOMI GGGCCC 1 cut(s) 287
PspPI GGNCC 4 cut(s) 125, 142, 287, 288
PspPPI RGGWCCY 1 cut(s) 142
PstNI CAGNNNCTG 1 cut(s) 2381
PsuI RGATCY 4 cut(s) 1415, 1867, 2047, 2329
RsaI GTAC 7 cut(s) 25, 483, 1130, 1325, 2030, 2276, 2390
RsaNI GTAC 7 cut(s) 24, 482, 1129, 1324, 2029, 2275, 2389
RseI CAYNNNNRTG 1 cut(s) 2322
SapI GCTCTTC 1 cut(s) 1266
SatI GCNGC 6 cut(s) 435, 1341, 1344, 1743, 1884, 2173
Sau96I GGNCC 4 cut(s) 125, 142, 287, 288
SchI GAGTC 3 cut(s) 223, 244, 437
SduI GDGCHC 3 cut(s) 291, 1278, 1604
SfaNI GCATC 7 cut(s) 203, 922, 1156, 1183, 1452, 1929, 2251
SfcI CTRYAG 2 cut(s) 1518, 1915
SinI GGWCC 2 cut(s) 125, 142
SmiMI CAYNNNNRTG 1 cut(s) 2322
SmlI CTYRAG 3 cut(s) 374, 1211, 1364
SmoI CTYRAG 3 cut(s) 374, 1211, 1364
SsiI CCGC 6 cut(s) 546, 1465, 1700, 2094, 2118, 2432
SspI AATATT 2 cut(s) 1110, 1837
SspMI CTAG 8 cut(s) 254, 407, 464, 1076, 1413, 2076, 2352, 2393
TaaI ACNGT 7 cut(s) 424, 494, 836, 864, 1133, 1323, 2359
TaiI ACGT 2 cut(s) 1313, 2143
TaqI TCGA 4 cut(s) 157, 508, 1774, 2447
TatI WGTACW 4 cut(s) 1128, 1323, 2028, 2274
TfiI GAWTC 7 cut(s) 15, 301, 487, 844, 1207, 2194, 2200
TscAI CASTG 5 cut(s) 179, 1131, 1326, 2189, 2362
TseI GCWGC 6 cut(s) 434, 1340, 1343, 1742, 1883, 2172
TspGWI ACGGA 1 cut(s) 2538
TspRI CASTG 5 cut(s) 179, 1131, 1326, 2189, 2362
Vha464I CTTAAG 1 cut(s) 1211
VpaK11BI GGWCC 2 cut(s) 125, 142
VspI ATTAAT 1 cut(s) 84
XapI RAATTY 5 cut(s) 876, 1117, 1183, 1556, 2059
XbaI TCTAGA 1 cut(s) 406
XceI RCATGY 1 cut(s) 1445
XcmI CCANNNNNNNNNTGG 1 cut(s) 71
XmiI GTMKAC 3 cut(s) 642, 1472, 2108
XspI CTAG 8 cut(s) 254, 407, 464, 1076, 1413, 2076, 2352, 2393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.