Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0000661

Physical Location & Seq

Genomic Coordinates Forward (+)

37204006 .. 37205890

Gene Structure 1885 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G436000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1056 bp

ATGAGGAAAGGAGCTAAGAGGAAGGTCAGCCAGAGAGAAGACAACAAGGAAAACTCGACCAAGCCAGACAACCACAAAGAACATCCCAGCAAGGCCACCACTCGATCAAAGCGGGTCAAGGCCTCCCACCCCGAATCCGAGCCAGAGTACTTGGAGGAGCCCCGTAACTTGGAAGATCTCTGGAAGGCTGCTTTTCCTGTTGGGACAGAATGGGATCAATTGGACGCGGTGTACCGGTTCAAGTGGGATTTCTCAAATCTGGAACAAGCATTTGAAGAGGGGGGCAAGCTGTTTGGGATTGGGAACAACAAAGTCTATCTCTTTGGTGGTACGGAGCCTCAACAAGTTCCTTTCAAGGGTAAATTGGAAATTGTTTACATACCTATTGTGGTGGCTGTTGTATCACCTTGCCCACCTTCTGATAAAATTGGGATCAAGTCAGTTCAGAGAGAGACTGAAGAAATAGTTCCAATGAAAGAGATGAAGATGGACTGGGTTCCATATATTCCTCTGGACAAGAGAGACCGCCAAGTTGTGGAATATGGGCGAAAATCTCCTCAAATATTTGTGTTGGGATGCACTCAGAGAAGGGCTGCTTTGAAGCACATGAAGATAGACCGTCTAAAGAAATTTGATTACTGCTTGCCATATTTGATGCCAATCAAGGAAGAGGAGCTTGAGCTGAGCACTGAGGTGGACATACTTTTCCCAGCAGAGCCAAATCCACCGGTTTACTGTGTATTTGATTGGCAGTTTGATGAAGTTGAGGAGTTTGCCGATGATCGGATAAAAGAAGAGGAACTATCTGCTGATCAAAAGGATGCCTTCATGGAGTTTGTCAAGGAGAAAGTACGCCAGCAAAAGAGAGAGAATCGAGAGAAAAAGGAAGCCCGCAGGCAAGCCTTTGAGAAAATGAGTGTGGAAGCTAAAGCAGCATTCGAAAATTTGAAGTATTATAAGTTCTATCCGGTGCAAACAGCGGATACTCCTGACATATCAGCTGTTAAGGCTTCATACATTAATAGGTACTACAACAAGGCTCATGAGGTTCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006950 GO:0007088 GO:0007346 GO:0008150 GO:0009266 GO:0009408 GO:0009628 GO:0009893 GO:0010286 GO:0010369 GO:0010468 GO:0010564 GO:0010604 GO:0010628 GO:0019222 GO:0031974 GO:0031981 GO:0033043 GO:0033044 GO:0033045 GO:0033047 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051726 GO:0051783 GO:0051983 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070013 GO:0080134 GO:0080135 GO:0098687 GO:1900034 GO:1901651

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

352

Amino Acids

41.17

Weight (kDa)

6.33

Isoelectric Point (pI)

47.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000661)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10010
fragaria_vesca	FvH4_6g03222 FvH4_6g03560 FvH4_6g03561 FvH4_6g03563 FvH4_6g03590 FvH4_6g03590 FvH4_6g09260
malus_domestica	MD04G1220200.v1.1 MD12G1240700.v1.1 MD15G1083500.v1.1
prunus_persica	Prupe.1G436000_v2.0.a1 Prupe.6G174800_v2.0.a1 Prupe.6G339200_v2.0.a1
pyrus_communis	pycom08g08260 pycom15g07800 pycom15g07810
rosa_chinensis	RchiOBHm_Chr3g0451551 RchiOBHm_Chr3g0451591 RchiOBHm_Chr3g0451621 RchiOBHm_Chr3g0452131 RchiOBHm_Chr3g0459621
rosa_laevigata	RLG00000025074 RLG00000025077 RLG00000025626 RLG00000029505 RLG00000035382 RLG00000035384
rosa_multiflora	Rmu_co8173672.1_g000001 Rmu_sc0000240.1_g000011 Rmu_sc0000240.1_g000014 Rmu_sc0004924.1_g000012 Rmu_sc0004924.1_g000020 Rmu_sc0004924.1_g000023 Rmu_sc0004924.1_g000025 Rmu_sc0004924.1_g000034 Rmu_sc0004924.1_g000035 Rmu_sc0009360.1_g000006 Rmu_sc0009360.1_g000008 Rmu_sc0009360.1_g000014 Rmu_sc0009360.1_g000047 Rmu_sc0011887.1_g000001 Rmu_sc0015119.1_g000001 Rmu_sc0023706.1_g000002
rosa_roxburghii	Rroxscaffold_164G00436050 Rroxscaffold_164G00436390 Rroxscaffold_164G00436450 Rroxscaffold_164G00436460 Rroxscaffold_4G00317080 Rroxscaffold_4G00317090 Rroxscaffold_6G00420140 Rroxscaffold_6G00428920
rosa_rugosa	Rorug02G0634200 Rorug02G0634500 Rorug02G0634700 Rorug02G0635400 Rorug02G0638500 Rorug03G0036600 Rorug03G0036700
rosa_samantha	Rh1BG103700 Rh1BG103800 Rh3AG040400 Rh3BG037900 Rh3BG038200 Rh3BG041900 Rh3BG097900 Rh3CG036600 Rh3CG040300 Rh3DG037300 Rh3DG037500 Rh3DG041200 Rh3DG099300
rosa_wichuraiana	Rw0G013830 Rw0G017580 Rw0G017600 Rw3G003070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	957
AccB7I	CCANNNNNTGG	1 cut(s)	535
AccII	CGCG	1 cut(s)	227
AciI	CCGC	5 cut(s)	112, 227, 526, 892, 980
AclWI	GGATC	2 cut(s)	222, 440
AcsI	RAATTY	2 cut(s)	629, 943
AcuI	CTGAAG	1 cut(s)	477
AfaI	GTAC	5 cut(s)	149, 233, 331, 852, 1028
AfiI	CCNNNNNNNGG	4 cut(s)	169, 356, 535, 783
AgeI	ACCGGT	2 cut(s)	234, 727
AgsI	TTSAA	5 cut(s)	241, 275, 355, 601, 949
AleI	CACNNNNGTG	1 cut(s)	692
AluBI	AGCT	6 cut(s)	14, 289, 676, 682, 926, 1001
AluI	AGCT	6 cut(s)	14, 289, 676, 682, 926, 1001
Alw21I	GWGCWC	1 cut(s)	689
Alw26I	GTCTC	2 cut(s)	446, 516
AlwI	GGATC	2 cut(s)	222, 440
AoxI	GGCC	2 cut(s)	93, 120
ApeKI	GCWGC	3 cut(s)	188, 593, 932
ApoI	RAATTY	2 cut(s)	629, 943
AseI	ATTAAT	1 cut(s)	1020
AsiGI	ACCGGT	2 cut(s)	234, 727
Asp700I	GAANNNNTTC	1 cut(s)	465
AsuHPI	GGTGA	1 cut(s)	396
AsuII	TTCGAA	1 cut(s)	939
BanII	GRGCYC	1 cut(s)	162
BbsI	GAAGAC	1 cut(s)	45
Bbv12I	GWGCWC	1 cut(s)	689
BbvI	GCAGC	3 cut(s)	175, 580, 944
BccI	CCATC	1 cut(s)	481
BciVI	GTATCC	1 cut(s)	976
BclI	TGATCA	1 cut(s)	811
BcoDI	GTCTC	2 cut(s)	446, 516
BfuI	GTATCC	1 cut(s)	976
BglII	AGATCT	1 cut(s)	175
BisI	GCNGC	3 cut(s)	189, 594, 933
BlpI	GCTNAGC	1 cut(s)	683
BlsI	GCNGC	3 cut(s)	190, 595, 934
BmcAI	AGTACT	1 cut(s)	149
BmiI	GGNNCC	3 cut(s)	159, 336, 498
BmrI	ACTGGG	1 cut(s)	502
BmsI	GCATC	3 cut(s)	566, 645, 811
BmuI	ACTGGG	1 cut(s)	502
BpiI	GAAGAC	1 cut(s)	45
Bpu1102I	GCTNAGC	1 cut(s)	683
Bpu14I	TTCGAA	1 cut(s)	939
BpuEI	CTTGAG	1 cut(s)	698
BsaBI	GATNNNNATC	1 cut(s)	659
BsaI	GGTCTC	1 cut(s)	516
BsaWI	WCCGGW	3 cut(s)	234, 727, 967
Bsc4I	CCNNNNNNNGG	4 cut(s)	169, 356, 535, 783
Bse118I	RCCGGY	2 cut(s)	234, 727
Bse1I	ACTGG	1 cut(s)	497
Bse8I	GATNNNNATC	1 cut(s)	659
BseGI	GGATG	3 cut(s)	82, 581, 826
BseJI	GATNNNNATC	1 cut(s)	659
BseLI	CCNNNNNNNGG	4 cut(s)	169, 356, 535, 783
BseMII	CTCAG	3 cut(s)	596, 674, 681
BseNI	ACTGG	1 cut(s)	497
BseRI	GAGGAG	4 cut(s)	170, 546, 686, 782
BseXI	GCAGC	3 cut(s)	175, 580, 944
BseYI	CCCAGC	2 cut(s)	86, 709
Bsh1236I	CGCG	1 cut(s)	227
BshFI	GGCC	2 cut(s)	95, 122
BshTI	ACCGGT	2 cut(s)	234, 727
BsiHKAI	GWGCWC	1 cut(s)	689
BsiSI	CCGG	3 cut(s)	235, 728, 968
BslFI	GGGAC	1 cut(s)	217
BslI	CCNNNNNNNGG	4 cut(s)	169, 356, 535, 783
BsmAI	GTCTC	2 cut(s)	446, 516
BsmFI	GGGAC	1 cut(s)	217
BsmI	GAATGC	1 cut(s)	935
BsnI	GGCC	2 cut(s)	95, 122
Bso31I	GGTCTC	1 cut(s)	516
Bsp119I	TTCGAA	1 cut(s)	939
Bsp1286I	GDGCHC	2 cut(s)	162, 689
Bsp143I	GATC	6 cut(s)	104, 175, 214, 432, 781, 811
Bsp1720I	GCTNAGC	1 cut(s)	683
BspACI	CCGC	5 cut(s)	112, 227, 526, 892, 980
BspANI	GGCC	2 cut(s)	95, 122
BspCNI	CTCAG	3 cut(s)	595, 675, 682
BspFNI	CGCG	1 cut(s)	227
BspHI	TCATGA	1 cut(s)	1042
BspLI	GGNNCC	3 cut(s)	159, 336, 498
BspPI	GGATC	2 cut(s)	222, 440
BspT104I	TTCGAA	1 cut(s)	939
BspTNI	GGTCTC	1 cut(s)	516
BsrFI	RCCGGY	2 cut(s)	234, 727
BsrI	ACTGG	1 cut(s)	497
BssAI	RCCGGY	2 cut(s)	234, 727
BssMI	GATC	6 cut(s)	104, 175, 214, 432, 781, 811
Bst4CI	ACNGT	2 cut(s)	620, 737
Bst6I	CTCTTC	3 cut(s)	270, 663, 789
BstBI	TTCGAA	1 cut(s)	939
BstC8I	GCNNGC	6 cut(s)	287, 644, 857, 892, 896, 900
BstDEI	CTNAG	4 cut(s)	15, 582, 683, 690
BstF5I	GGATG	3 cut(s)	82, 581, 826
BstFNI	CGCG	1 cut(s)	227
BstKTI	GATC	6 cut(s)	107, 178, 217, 435, 784, 814
BstMAI	GTCTC	2 cut(s)	446, 516
BstMBI	GATC	6 cut(s)	104, 175, 214, 432, 781, 811
BstMWI	GCNNNNNNNGC	2 cut(s)	932, 1007
BstUI	CGCG	1 cut(s)	227
BstV1I	GCAGC	3 cut(s)	175, 580, 944
BstV2I	GAAGAC	1 cut(s)	45
BstX2I	RGATCY	1 cut(s)	175
BstYI	RGATCY	1 cut(s)	175
BsuI	GTATCC	1 cut(s)	976
BsuRI	GGCC	2 cut(s)	95, 122
BtsCI	GGATG	3 cut(s)	82, 581, 826
BtsIMutI	CAGTG	1 cut(s)	687
Cac8I	GCNNGC	6 cut(s)	287, 644, 857, 892, 896, 900
CciI	TCATGA	1 cut(s)	1042
Cfr10I	RCCGGY	2 cut(s)	234, 727
CseI	GACGC	1 cut(s)	233
Csp6I	GTAC	5 cut(s)	148, 232, 330, 851, 1027
CspAI	ACCGGT	2 cut(s)	234, 727
CviAII	CATG	3 cut(s)	607, 829, 1043
CviQI	GTAC	5 cut(s)	148, 232, 330, 851, 1027
DdeI	CTNAG	4 cut(s)	15, 582, 683, 690
DpnI	GATC	6 cut(s)	106, 177, 216, 434, 783, 813
DpnII	GATC	6 cut(s)	104, 175, 214, 432, 781, 811
Eam1104I	CTCTTC	3 cut(s)	270, 663, 789
EarI	CTCTTC	3 cut(s)	270, 663, 789
Eco147I	AGGCCT	1 cut(s)	122
Eco24I	GRGCYC	1 cut(s)	162
Eco31I	GGTCTC	1 cut(s)	516
Eco57I	CTGAAG	1 cut(s)	477
EcoT38I	GRGCYC	1 cut(s)	162
FaeI	CATG	3 cut(s)	610, 832, 1046
FalI	AAGNNNNNCTT	6 cut(s)	580, 612, 660, 692, 809, 841
FaqI	GGGAC	1 cut(s)	217
FatI	CATG	3 cut(s)	606, 828, 1042
FauI	CCCGC	2 cut(s)	105, 899
FbaI	TGATCA	1 cut(s)	811
Fnu4HI	GCNGC	3 cut(s)	189, 594, 933
FokI	GGATG	3 cut(s)	69, 588, 833
FriOI	GRGCYC	1 cut(s)	162
Fsp4HI	GCNGC	3 cut(s)	189, 594, 933
GluI	GCNGC	3 cut(s)	189, 594, 933
GsaI	CCCAGC	2 cut(s)	90, 713
HaeIII	GGCC	2 cut(s)	95, 122
HapII	CCGG	3 cut(s)	235, 728, 968
HgaI	GACGC	1 cut(s)	233
Hin1II	CATG	3 cut(s)	610, 832, 1046
HinfI	GANTC	2 cut(s)	134, 871
HpaII	CCGG	3 cut(s)	235, 728, 968
HphI	GGTGA	1 cut(s)	396
Hpy166II	GTNNAC	4 cut(s)	232, 376, 697, 733
Hpy188I	TCNGA	6 cut(s)	139, 421, 447, 585, 786, 1055
Hpy188III	TCNNGA	6 cut(s)	181, 260, 512, 875, 989, 1043
Hpy8I	GTNNAC	4 cut(s)	232, 376, 697, 733
HpyAV	CCTTC	5 cut(s)	16, 178, 426, 582, 835
HpyCH4III	ACNGT	2 cut(s)	620, 737
HpyCH4V	TGCA	2 cut(s)	579, 973
HpyF10VI	GCNNNNNNNGC	2 cut(s)	932, 1007
HpyF3I	CTNAG	4 cut(s)	15, 582, 683, 690
Hsp92II	CATG	3 cut(s)	610, 832, 1046
Ksp22I	TGATCA	1 cut(s)	811
Kzo9I	GATC	6 cut(s)	104, 175, 214, 432, 781, 811
LmnI	GCTCC	4 cut(s)	11, 157, 334, 673
Lsp1109I	GCAGC	3 cut(s)	175, 580, 944
LweI	GCATC	3 cut(s)	566, 645, 811
MaeIII	GTNAC	1 cut(s)	164
MalI	GATC	6 cut(s)	106, 177, 216, 434, 783, 813
MboI	GATC	6 cut(s)	104, 175, 214, 432, 781, 811
MboII	GAAGA	8 cut(s)	50, 185, 287, 470, 496, 622, 680, 806
MfeI	CAATTG	1 cut(s)	218
MflI	RGATCY	1 cut(s)	175
MhlI	GDGCHC	2 cut(s)	162, 689
MluCI	AATT	6 cut(s)	218, 362, 369, 426, 629, 943
MroXI	GAANNNNTTC	1 cut(s)	465
MseI	TTAA	2 cut(s)	1005, 1020
MslI	CAYNNNNRTG	1 cut(s)	692
MspA1I	CMGCKG	2 cut(s)	980, 1001
MspI	CCGG	3 cut(s)	235, 728, 968
MunI	CAATTG	1 cut(s)	218
Mva1269I	GAATGC	1 cut(s)	935
MvnI	CGCG	1 cut(s)	227
MwoI	GCNNNNNNNGC	2 cut(s)	932, 1007
NdeII	GATC	6 cut(s)	104, 175, 214, 432, 781, 811
NlaIII	CATG	3 cut(s)	610, 832, 1046
NlaIV	GGNNCC	3 cut(s)	159, 336, 498
NspV	TTCGAA	1 cut(s)	939
OliI	CACNNNNGTG	1 cut(s)	692
PagI	TCATGA	1 cut(s)	1042
PceI	AGGCCT	1 cut(s)	122
PctI	GAATGC	1 cut(s)	935
PdmI	GAANNNNTTC	1 cut(s)	465
PfeI	GAWTC	2 cut(s)	134, 871
PflMI	CCANNNNNTGG	1 cut(s)	535
PinAI	ACCGGT	2 cut(s)	234, 727
PkrI	GCNGC	3 cut(s)	190, 595, 934
PshBI	ATTAAT	1 cut(s)	1020
PsiI	TTATAA	1 cut(s)	957
PspFI	CCCAGC	2 cut(s)	86, 709
PspN4I	GGNNCC	3 cut(s)	159, 336, 498
PsrI	GAACNNNNNNTAC	2 cut(s)	944, 976
PsuI	RGATCY	1 cut(s)	175
PvuII	CAGCTG	1 cut(s)	1001
RsaI	GTAC	5 cut(s)	149, 233, 331, 852, 1028
RsaNI	GTAC	5 cut(s)	148, 232, 330, 851, 1027
RseI	CAYNNNNRTG	1 cut(s)	692
SaqAI	TTAA	2 cut(s)	1005, 1020
SatI	GCNGC	3 cut(s)	189, 594, 933
Sau3AI	GATC	6 cut(s)	104, 175, 214, 432, 781, 811
ScaI	AGTACT	1 cut(s)	149
SduI	GDGCHC	2 cut(s)	162, 689
SfaNI	GCATC	3 cut(s)	566, 645, 811
SfuI	TTCGAA	1 cut(s)	939
SmiMI	CAYNNNNRTG	1 cut(s)	692
SmlI	CTYRAG	1 cut(s)	677
SmoI	CTYRAG	1 cut(s)	677
Sse9I	AATT	6 cut(s)	218, 362, 369, 426, 629, 943
SseBI	AGGCCT	1 cut(s)	122
SsiI	CCGC	5 cut(s)	112, 227, 526, 892, 980
SspI	AATATT	1 cut(s)	564
StuI	AGGCCT	1 cut(s)	122
TaaI	ACNGT	2 cut(s)	620, 737
TaqI	TCGA	4 cut(s)	56, 103, 874, 939
TasI	AATT	6 cut(s)	218, 362, 369, 426, 629, 943
TatI	WGTACW	1 cut(s)	147
TfiI	GAWTC	2 cut(s)	134, 871
Tru1I	TTAA	2 cut(s)	1005, 1020
Tru9I	TTAA	2 cut(s)	1005, 1020
TscAI	CASTG	1 cut(s)	694
TseI	GCWGC	3 cut(s)	188, 593, 932
TspDTI	ATGAA	6 cut(s)	488, 497, 623, 774, 817, 1002
TspGWI	ACGGA	1 cut(s)	347
TspRI	CASTG	1 cut(s)	694
Van91I	CCANNNNNTGG	1 cut(s)	535
VspI	ATTAAT	1 cut(s)	1020
XapI	RAATTY	2 cut(s)	629, 943
XmnI	GAANNNNTTC	1 cut(s)	465
ZrmI	AGTACT	1 cut(s)	149

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.