Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0000661

Physical Location & Seq

Genomic Coordinates Forward (+)

17928142 .. 17935730

Gene Structure 7589 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G174800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1044 bp

ATGAGGAGGGGAGCTAAGAGGAAGGCGAGCCAGAAGGAGGCAGAGAACCACAAAGAATCGAGCAAAGCCGCCAACAGCAGCAAAGCCACAAGGACTCGGACGACGAAGAGGGTTAAGGCGTCGGAGCCCCAATCGGAGCCCCAATACTTGGAGGACCCTCGGAACCTCGAAGATCTATGGAAGGCTGCATTTCCTGTTGGGACTGAGTGGGATCAATTGGACTCCGTTTACCAATTCAAGTGGGATTTCTCCAATCTCGAACAAGCTTTTGAAGAAGGGGGGAAGCTCTATGACCTTGGCAAGAACAAAGTCTATCTCTTTGGTTGTACTGAGCCTCAATTGGTGTCTGTGAATGGTGAAAACAAAGTTGTTTGCATTCCTGTTGTGGTCGCTGTTGTATCACCTTTCCCCCCTTCGGATAAGATTGGGATTAATTCGGTTCAGAGAGAAGCTGAAGAAATAATTCCCATGAAACAAATGAAAATGGACTGGATTCCGTATATTCCTCTGGAGAATAGAGACAGCCAGGTTGATAGACTTAAATCTCAAATATTTATTTTGGGCTGCACTCAGAGAAGGGCTGCTTTGAAACACATGAAGATAGATCGTCTCAAGAAATTTGAGTACTGTTTGCCTTATTTCTATCAGCCTTTTAAGGAAGATGAGCTTGAGCAAAGCACTGAGGTCCCAATAATGTTTCCAGGAGAGCCAAAGCCGGTTTACTGTGAATTTGATTGGGAGTTGGATGAATTGGAGGAGTTCACTGATAAATTGATAGAAGAGGAGGAATTATCTGCAGACCAGAAGGATGCATTCAAGGAGTTTGTCAAGGAGAAAGTACGTGAACAAAAGAAAAATAACCGGGAGGCAAGGGAAGCCCGAAGAAAAGCCATTGAAGAGATGAGTGAGGAAGCTAAAGCAGCATTTGAAAATATGAGGTTTTACAAGTTCTACCCTGTACAGACACCAGATACTCCTGACATATCAAATGTTAAGGCTCCATTCATCAACAGGTATTATGGCAAAGCTCATGAGGTATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006950 GO:0007088 GO:0007346 GO:0008150 GO:0009266 GO:0009408 GO:0009628 GO:0009893 GO:0010286 GO:0010369 GO:0010468 GO:0010564 GO:0010604 GO:0010628 GO:0019222 GO:0031974 GO:0031981 GO:0033043 GO:0033044 GO:0033045 GO:0033047 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051726 GO:0051783 GO:0051983 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070013 GO:0080134 GO:0080135 GO:0098687 GO:1900034 GO:1901651

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

348

Amino Acids

40.59

Weight (kDa)

5.54

Isoelectric Point (pI)

55.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000661)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10010
fragaria_vesca	FvH4_6g03222 FvH4_6g03560 FvH4_6g03561 FvH4_6g03563 FvH4_6g03590 FvH4_6g03590 FvH4_6g09260
malus_domestica	MD04G1220200.v1.1 MD12G1240700.v1.1 MD15G1083500.v1.1
prunus_persica	Prupe.1G436000_v2.0.a1 Prupe.6G174800_v2.0.a1 Prupe.6G339200_v2.0.a1
pyrus_communis	pycom08g08260 pycom15g07800 pycom15g07810
rosa_chinensis	RchiOBHm_Chr3g0451551 RchiOBHm_Chr3g0451591 RchiOBHm_Chr3g0451621 RchiOBHm_Chr3g0452131 RchiOBHm_Chr3g0459621
rosa_laevigata	RLG00000025074 RLG00000025077 RLG00000025626 RLG00000029505 RLG00000035382 RLG00000035384
rosa_multiflora	Rmu_co8173672.1_g000001 Rmu_sc0000240.1_g000011 Rmu_sc0000240.1_g000014 Rmu_sc0004924.1_g000012 Rmu_sc0004924.1_g000020 Rmu_sc0004924.1_g000023 Rmu_sc0004924.1_g000025 Rmu_sc0004924.1_g000034 Rmu_sc0004924.1_g000035 Rmu_sc0009360.1_g000006 Rmu_sc0009360.1_g000008 Rmu_sc0009360.1_g000014 Rmu_sc0009360.1_g000047 Rmu_sc0011887.1_g000001 Rmu_sc0015119.1_g000001 Rmu_sc0023706.1_g000002
rosa_roxburghii	Rroxscaffold_164G00436050 Rroxscaffold_164G00436390 Rroxscaffold_164G00436450 Rroxscaffold_164G00436460 Rroxscaffold_4G00317080 Rroxscaffold_4G00317090 Rroxscaffold_6G00420140 Rroxscaffold_6G00428920
rosa_rugosa	Rorug02G0634200 Rorug02G0634500 Rorug02G0634700 Rorug02G0635400 Rorug02G0638500 Rorug03G0036600 Rorug03G0036700
rosa_samantha	Rh1BG103700 Rh1BG103800 Rh3AG040400 Rh3BG037900 Rh3BG038200 Rh3BG041900 Rh3BG097900 Rh3CG036600 Rh3CG040300 Rh3DG037300 Rh3DG037500 Rh3DG041200 Rh3DG099300
rosa_wichuraiana	Rw0G013830 Rw0G017580 Rw0G017600 Rw3G003070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	148
AciI	CCGC	1 cut(s)	69
AclWI	GGATC	1 cut(s)	219
AcsI	RAATTY	2 cut(s)	617, 728
AcuI	CTGAAG	1 cut(s)	474
AcyI	GRCGYC	1 cut(s)	119
AfaI	GTAC	4 cut(s)	328, 626, 840, 960
AfiI	CCNNNNNNNGG	3 cut(s)	37, 148, 415
AgsI	TTSAA	6 cut(s)	238, 272, 589, 817, 896, 929
AjnI	CCWGG	2 cut(s)	525, 700
AluBI	AGCT	7 cut(s)	14, 266, 286, 452, 667, 914, 1028
AluI	AGCT	7 cut(s)	14, 266, 286, 452, 667, 914, 1028
Alw26I	GTCTC	2 cut(s)	513, 614
AlwI	GGATC	1 cut(s)	219
ApeKI	GCWGC	5 cut(s)	78, 185, 564, 581, 920
ApoI	RAATTY	2 cut(s)	617, 728
AseI	ATTAAT	1 cut(s)	432
Asp700I	GAANNNNTTC	1 cut(s)	462
AspS9I	GGNCC	2 cut(s)	154, 685
AsuC2I	CCSGG	1 cut(s)	863
AsuHPI	GGTGA	2 cut(s)	368, 393
AvaII	GGWCC	2 cut(s)	154, 685
BanII	GRGCYC	2 cut(s)	129, 141
BbvI	GCAGC	5 cut(s)	90, 172, 551, 568, 932
BciT130I	CCWGG	2 cut(s)	527, 702
BcnI	CCSGG	1 cut(s)	863
BcoDI	GTCTC	2 cut(s)	513, 614
BfmI	CTRYAG	1 cut(s)	795
BglII	AGATCT	1 cut(s)	172
BisI	GCNGC	6 cut(s)	69, 79, 186, 565, 582, 921
BlsI	GCNGC	6 cut(s)	70, 80, 187, 566, 583, 922
BmcAI	AGTACT	1 cut(s)	626
Bme1390I	CCNGG	3 cut(s)	527, 702, 863
Bme18I	GGWCC	2 cut(s)	154, 685
BmgT120I	GGNCC	2 cut(s)	154, 685
BmiI	GGNNCC	6 cut(s)	126, 138, 156, 164, 687, 999
BmrFI	CCNGG	3 cut(s)	527, 702, 863
BmsI	GCATC	1 cut(s)	799
BpmI	CTGGAG	1 cut(s)	530
BpuEI	CTTGAG	2 cut(s)	596, 689
BpuMI	CCSGG	1 cut(s)	863
BsaAI	YACGTR	1 cut(s)	842
BsaHI	GRCGYC	1 cut(s)	119
BsaJI	CCNNGG	2 cut(s)	158, 295
Bsc4I	CCNNNNNNNGG	3 cut(s)	37, 148, 415
Bse118I	RCCGGY	1 cut(s)	715
Bse1I	ACTGG	1 cut(s)	494
BseBI	CCWGG	2 cut(s)	527, 702
BseDI	CCNNGG	2 cut(s)	158, 295
BseGI	GGATG	2 cut(s)	751, 814
BseLI	CCNNNNNNNGG	3 cut(s)	37, 148, 415
BseMII	CTCAG	4 cut(s)	195, 321, 584, 672
BseNI	ACTGG	1 cut(s)	494
BseRI	GAGGAG	3 cut(s)	19, 770, 797
BseXI	GCAGC	5 cut(s)	90, 172, 551, 568, 932
BsgI	GTGCAG	1 cut(s)	550
BsiSI	CCGG	2 cut(s)	716, 862
BslFI	GGGAC	2 cut(s)	214, 671
BslI	CCNNNNNNNGG	3 cut(s)	37, 148, 415
BsmAI	GTCTC	2 cut(s)	513, 614
BsmBI	CGTCTC	1 cut(s)	614
BsmFI	GGGAC	2 cut(s)	214, 671
BsmI	GAATGC	2 cut(s)	375, 812
Bsp1286I	GDGCHC	2 cut(s)	129, 141
Bsp1407I	TGTACA	1 cut(s)	958
Bsp143I	GATC	3 cut(s)	172, 211, 604
BspACI	CCGC	1 cut(s)	69
BspCNI	CTCAG	4 cut(s)	196, 322, 583, 673
BspHI	TCATGA	1 cut(s)	1030
BspLI	GGNNCC	6 cut(s)	126, 138, 156, 164, 687, 999
BspMAI	CTGCAG	1 cut(s)	799
BspPI	GGATC	1 cut(s)	219
BsrFI	RCCGGY	1 cut(s)	715
BsrGI	TGTACA	1 cut(s)	958
BsrI	ACTGG	1 cut(s)	494
BssAI	RCCGGY	1 cut(s)	715
BssECI	CCNNGG	2 cut(s)	158, 295
BssMI	GATC	3 cut(s)	172, 211, 604
BssNI	GRCGYC	1 cut(s)	119
BssT1I	CCWWGG	1 cut(s)	295
Bst2UI	CCWGG	2 cut(s)	527, 702
Bst4CI	ACNGT	2 cut(s)	629, 725
Bst6I	CTCTTC	3 cut(s)	101, 774, 891
BstACI	GRCGYC	1 cut(s)	119
BstAUI	TGTACA	1 cut(s)	958
BstBAI	YACGTR	1 cut(s)	842
BstC8I	GCNNGC	1 cut(s)	28
BstDEI	CTNAG	5 cut(s)	15, 204, 330, 570, 681
BstF5I	GGATG	2 cut(s)	751, 814
BstKTI	GATC	3 cut(s)	175, 214, 607
BstMAI	GTCTC	2 cut(s)	513, 614
BstMBI	GATC	3 cut(s)	172, 211, 604
BstMWI	GCNNNNNNNGC	2 cut(s)	875, 920
BstNI	CCWGG	2 cut(s)	527, 702
BstSCI	CCNGG	3 cut(s)	525, 700, 861
BstSFI	CTRYAG	1 cut(s)	795
BstV1I	GCAGC	5 cut(s)	90, 172, 551, 568, 932
BstX2I	RGATCY	1 cut(s)	172
BstYI	RGATCY	1 cut(s)	172
BtsCI	GGATG	2 cut(s)	751, 814
BtsIMutI	CAGTG	2 cut(s)	678, 762
Cac8I	GCNNGC	1 cut(s)	28
CciI	TCATGA	1 cut(s)	1030
Cfr10I	RCCGGY	1 cut(s)	715
Cfr13I	GGNCC	2 cut(s)	154, 685
CseI	GACGC	1 cut(s)	108
Csp6I	GTAC	4 cut(s)	327, 625, 839, 959
CspCI	CAANNNNNGTGG	2 cut(s)	221, 256
CviAII	CATG	3 cut(s)	469, 595, 1031
CviQI	GTAC	4 cut(s)	327, 625, 839, 959
DdeI	CTNAG	5 cut(s)	15, 204, 330, 570, 681
DpnI	GATC	3 cut(s)	174, 213, 606
DpnII	GATC	3 cut(s)	172, 211, 604
Eam1104I	CTCTTC	3 cut(s)	101, 774, 891
EarI	CTCTTC	3 cut(s)	101, 774, 891
Eco130I	CCWWGG	1 cut(s)	295
Eco24I	GRGCYC	2 cut(s)	129, 141
Eco47I	GGWCC	2 cut(s)	154, 685
Eco57I	CTGAAG	1 cut(s)	474
EcoO109I	RGGNCCY	2 cut(s)	154, 685
EcoRII	CCWGG	2 cut(s)	525, 700
EcoT14I	CCWWGG	1 cut(s)	295
EcoT22I	ATGCAT	1 cut(s)	814
EcoT38I	GRGCYC	2 cut(s)	129, 141
ErhI	CCWWGG	1 cut(s)	295
Esp3I	CGTCTC	1 cut(s)	614
FaeI	CATG	3 cut(s)	472, 598, 1034
FaiI	YATR	9 cut(s)	178, 291, 470, 501, 596, 935, 983, 1020, 1032
FalI	AAGNNNNNCTT	4 cut(s)	568, 600, 651, 683
FaqI	GGGAC	2 cut(s)	214, 671
FatI	CATG	3 cut(s)	468, 594, 1030
Fnu4HI	GCNGC	6 cut(s)	69, 79, 186, 565, 582, 921
FokI	GGATG	2 cut(s)	758, 821
FriOI	GRGCYC	2 cut(s)	129, 141
Fsp4HI	GCNGC	6 cut(s)	69, 79, 186, 565, 582, 921
GluI	GCNGC	6 cut(s)	69, 79, 186, 565, 582, 921
GsuI	CTGGAG	1 cut(s)	530
HapII	CCGG	2 cut(s)	716, 862
HgaI	GACGC	1 cut(s)	108
Hin1I	GRCGYC	1 cut(s)	119
Hin1II	CATG	3 cut(s)	472, 598, 1034
HindIII	AAGCTT	1 cut(s)	264
HinfI	GANTC	4 cut(s)	56, 94, 221, 493
HpaII	CCGG	2 cut(s)	716, 862
HphI	GGTGA	2 cut(s)	368, 393
Hpy166II	GTNNAC	4 cut(s)	229, 721, 762, 845
Hpy188I	TCNGA	7 cut(s)	99, 124, 136, 162, 418, 444, 573
Hpy188III	TCNNGA	5 cut(s)	257, 509, 613, 977, 1031
Hpy8I	GTNNAC	4 cut(s)	229, 721, 762, 845
Hpy99I	CGWCG	2 cut(s)	106, 124
HpyAV	CCTTC	7 cut(s)	16, 28, 175, 269, 423, 570, 799
HpyCH4III	ACNGT	2 cut(s)	629, 725
HpyCH4IV	ACGT	1 cut(s)	841
HpyCH4V	TGCA	5 cut(s)	188, 375, 567, 797, 812
HpyF10VI	GCNNNNNNNGC	2 cut(s)	875, 920
HpyF3I	CTNAG	5 cut(s)	15, 204, 330, 570, 681
HpySE526I	ACGT	1 cut(s)	841
Hsp92I	GRCGYC	1 cut(s)	119
Hsp92II	CATG	3 cut(s)	472, 598, 1034
Kzo9I	GATC	3 cut(s)	172, 211, 604
LmnI	GCTCC	4 cut(s)	11, 124, 136, 1003
Lsp1109I	GCAGC	5 cut(s)	90, 172, 551, 568, 932
LweI	GCATC	1 cut(s)	799
MaeII	ACGT	1 cut(s)	841
MalI	GATC	3 cut(s)	174, 213, 606
MboI	GATC	3 cut(s)	172, 211, 604
MboII	GAAGA	9 cut(s)	118, 182, 284, 467, 610, 671, 791, 894, 908
MfeI	CAATTG	2 cut(s)	215, 338
MflI	RGATCY	1 cut(s)	172
MhlI	GDGCHC	2 cut(s)	129, 141
MlyI	GAGTC	2 cut(s)	88, 215
MmeI	TCCRAC	2 cut(s)	102, 723
Mph1103I	ATGCAT	1 cut(s)	814
MroXI	GAANNNNTTC	1 cut(s)	462
MseI	TTAA	5 cut(s)	114, 432, 540, 654, 993
MspI	CCGG	2 cut(s)	716, 862
MspR9I	CCNGG	3 cut(s)	527, 702, 863
MunI	CAATTG	2 cut(s)	215, 338
Mva1269I	GAATGC	2 cut(s)	375, 812
MvaI	CCWGG	2 cut(s)	527, 702
MwoI	GCNNNNNNNGC	2 cut(s)	875, 920
NciI	CCSGG	1 cut(s)	863
NdeII	GATC	3 cut(s)	172, 211, 604
NlaIII	CATG	3 cut(s)	472, 598, 1034
NlaIV	GGNNCC	6 cut(s)	126, 138, 156, 164, 687, 999
NsiI	ATGCAT	1 cut(s)	814
PagI	TCATGA	1 cut(s)	1030
PctI	GAATGC	2 cut(s)	375, 812
PdmI	GAANNNNTTC	1 cut(s)	462
PfeI	GAWTC	2 cut(s)	56, 493
PflMI	CCANNNNNTGG	1 cut(s)	148
PfoI	TCCNGGA	1 cut(s)	700
PkrI	GCNGC	6 cut(s)	70, 80, 187, 566, 583, 922
PleI	GAGTC	2 cut(s)	88, 215
PpsI	GAGTC	2 cut(s)	88, 215
Ppu21I	YACGTR	1 cut(s)	842
PpuMI	RGGWCCY	2 cut(s)	154, 685
PshBI	ATTAAT	1 cut(s)	432
Psp5II	RGGWCCY	2 cut(s)	154, 685
Psp6I	CCWGG	2 cut(s)	525, 700
PspGI	CCWGG	2 cut(s)	525, 700
PspN4I	GGNNCC	6 cut(s)	126, 138, 156, 164, 687, 999
PspPI	GGNCC	2 cut(s)	154, 685
PspPPI	RGGWCCY	2 cut(s)	154, 685
PstI	CTGCAG	1 cut(s)	799
PsuI	RGATCY	1 cut(s)	172
RsaI	GTAC	4 cut(s)	328, 626, 840, 960
RsaNI	GTAC	4 cut(s)	327, 625, 839, 959
SaqAI	TTAA	5 cut(s)	114, 432, 540, 654, 993
SatI	GCNGC	6 cut(s)	69, 79, 186, 565, 582, 921
Sau3AI	GATC	3 cut(s)	172, 211, 604
Sau96I	GGNCC	2 cut(s)	154, 685
ScaI	AGTACT	1 cut(s)	626
SchI	GAGTC	2 cut(s)	88, 215
ScrFI	CCNGG	3 cut(s)	527, 702, 863
SduI	GDGCHC	2 cut(s)	129, 141
SfaNI	GCATC	1 cut(s)	799
SfcI	CTRYAG	1 cut(s)	795
SinI	GGWCC	2 cut(s)	154, 685
SmlI	CTYRAG	2 cut(s)	611, 668
SmoI	CTYRAG	2 cut(s)	611, 668
SsiI	CCGC	1 cut(s)	69
SspI	AATATT	1 cut(s)	552
StyD4I	CCNGG	3 cut(s)	525, 700, 861
StyI	CCWWGG	1 cut(s)	295
TaaI	ACNGT	2 cut(s)	629, 725
TaiI	ACGT	1 cut(s)	844
TaqI	TCGA	3 cut(s)	59, 168, 258
TatI	WGTACW	3 cut(s)	326, 624, 958
TauI	GCSGC	1 cut(s)	71
TfiI	GAWTC	2 cut(s)	56, 493
Tru1I	TTAA	5 cut(s)	114, 432, 540, 654, 993
Tru9I	TTAA	5 cut(s)	114, 432, 540, 654, 993
TscAI	CASTG	2 cut(s)	685, 769
TseI	GCWGC	5 cut(s)	78, 185, 564, 581, 920
TspDTI	ATGAA	5 cut(s)	485, 494, 611, 762, 994
TspGWI	ACGGA	2 cut(s)	214, 486
TspRI	CASTG	2 cut(s)	685, 769
Van91I	CCANNNNNTGG	1 cut(s)	148
VpaK11BI	GGWCC	2 cut(s)	154, 685
VspI	ATTAAT	1 cut(s)	432
XapI	RAATTY	2 cut(s)	617, 728
XmnI	GAANNNNTTC	1 cut(s)	462
ZrmI	AGTACT	1 cut(s)	626
Zsp2I	ATGCAT	1 cut(s)	814

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.