No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 936 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 290 |
| AccB1I | GGYRCC | 2 cut(s) | 179, 367 |
| AccBSI | CCGCTC | 1 cut(s) | 595 |
| AccI | GTMKAC | 1 cut(s) | 294 |
| AccII | CGCG | 4 cut(s) | 81, 90, 373, 690 |
| AclWI | GGATC | 6 cut(s) | 198, 337, 454, 467, 881, 894 |
| AcoI | YGGCCR | 4 cut(s) | 29, 304, 357, 374 |
| AcsI | RAATTY | 3 cut(s) | 496, 526, 728 |
| AcyI | GRCGYC | 1 cut(s) | 368 |
| AdeI | CACNNNGTG | 1 cut(s) | 186 |
| AfaI | GTAC | 5 cut(s) | 556, 664, 714, 749, 914 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 34, 352, 643 |
| AgsI | TTSAA | 3 cut(s) | 149, 525, 577 |
| AleI | CACNNNNGTG | 1 cut(s) | 968 |
| AluBI | AGCT | 2 cut(s) | 760, 877 |
| AluI | AGCT | 2 cut(s) | 760, 877 |
| Alw26I | GTCTC | 2 cut(s) | 308, 433 |
| AlwI | GGATC | 6 cut(s) | 198, 337, 454, 467, 881, 894 |
| Ama87I | CYCGRG | 1 cut(s) | 236 |
| AoxI | GGCC | 6 cut(s) | 24, 29, 96, 304, 357, 374 |
| ApeKI | GCWGC | 4 cut(s) | 103, 109, 136, 331 |
| ApoI | RAATTY | 3 cut(s) | 496, 526, 728 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 245 |
| AspLEI | GCGC | 5 cut(s) | 83, 90, 141, 370, 1016 |
| AspS9I | GGNCC | 2 cut(s) | 25, 402 |
| AsuC2I | CCSGG | 3 cut(s) | 28, 173, 947 |
| AsuHPI | GGTGA | 1 cut(s) | 838 |
| AsuII | TTCGAA | 1 cut(s) | 249 |
| AvaI | CYCGRG | 1 cut(s) | 236 |
| AvaII | GGWCC | 1 cut(s) | 402 |
| BamHI | GGATCC | 2 cut(s) | 459, 886 |
| BanI | GGYRCC | 2 cut(s) | 179, 367 |
| BbvI | GCAGC | 4 cut(s) | 115, 121, 148, 343 |
| BccI | CCATC | 2 cut(s) | 379, 445 |
| BceAI | ACGGC | 4 cut(s) | 310, 344, 364, 607 |
| BcnI | CCSGG | 3 cut(s) | 28, 173, 947 |
| BcoDI | GTCTC | 2 cut(s) | 308, 433 |
| BfoI | RGCGCY | 2 cut(s) | 371, 1017 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 32, 365 |
| BglII | AGATCT | 1 cut(s) | 151 |
| BmcAI | AGTACT | 1 cut(s) | 664 |
| Bme1390I | CCNGG | 3 cut(s) | 28, 173, 947 |
| Bme18I | GGWCC | 1 cut(s) | 402 |
| BmeT110I | CYCGRG | 1 cut(s) | 236 |
| BmgT120I | GGNCC | 2 cut(s) | 25, 402 |
| BmiI | GGNNCC | 6 cut(s) | 13, 117, 181, 369, 461, 888 |
| BmrFI | CCNGG | 3 cut(s) | 28, 173, 947 |
| BmrI | ACTGGG | 1 cut(s) | 229 |
| BmuI | ACTGGG | 1 cut(s) | 229 |
| BpmI | CTGGAG | 2 cut(s) | 218, 497 |
| Bpu14I | TTCGAA | 1 cut(s) | 249 |
| BpuMI | CCSGG | 3 cut(s) | 28, 173, 947 |
| BsaAI | YACGTR | 1 cut(s) | 127 |
| BsaHI | GRCGYC | 1 cut(s) | 368 |
| BsaI | GGTCTC | 1 cut(s) | 308 |
| BsaJI | CCNNGG | 1 cut(s) | 371 |
| BsaWI | WCCGGW | 2 cut(s) | 118, 518 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 305, 335, 581, 611 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 34, 352, 643 |
| Bse118I | RCCGGY | 2 cut(s) | 31, 334 |
| Bse1I | ACTGG | 2 cut(s) | 224, 610 |
| BseDI | CCNNGG | 1 cut(s) | 371 |
| BseGI | GGATG | 1 cut(s) | 606 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 34, 352, 643 |
| BseMII | CTCAG | 2 cut(s) | 33, 572 |
| BseNI | ACTGG | 2 cut(s) | 224, 610 |
| BseRI | GAGGAG | 7 cut(s) | 605, 659, 662, 758, 788, 836, 869 |
| BseX3I | CGGCCG | 2 cut(s) | 29, 374 |
| BseXI | GCAGC | 4 cut(s) | 115, 121, 148, 343 |
| BseYI | CCCAGC | 2 cut(s) | 547, 569 |
| Bsh1236I | CGCG | 4 cut(s) | 81, 90, 373, 690 |
| Bsh1285I | CGRYCG | 2 cut(s) | 32, 377 |
| BshFI | GGCC | 6 cut(s) | 26, 31, 98, 306, 359, 376 |
| BshNI | GGYRCC | 2 cut(s) | 179, 367 |
| BsiEI | CGRYCG | 2 cut(s) | 32, 377 |
| BsiHKCI | CYCGRG | 1 cut(s) | 236 |
| BsiSI | CCGG | 8 cut(s) | 28, 32, 113, 119, 173, 335, 519, 947 |
| BslFI | GGGAC | 1 cut(s) | 296 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 34, 352, 643 |
| BsmAI | GTCTC | 2 cut(s) | 308, 433 |
| BsmFI | GGGAC | 1 cut(s) | 296 |
| BsnI | GGCC | 6 cut(s) | 26, 31, 98, 306, 359, 376 |
| Bso31I | GGTCTC | 1 cut(s) | 308 |
| BsoBI | CYCGRG | 1 cut(s) | 236 |
| Bsp119I | TTCGAA | 1 cut(s) | 249 |
| Bsp1407I | TGTACA | 1 cut(s) | 712 |
| Bsp143I | GATC | 5 cut(s) | 151, 190, 342, 459, 886 |
| BspANI | GGCC | 6 cut(s) | 26, 31, 98, 306, 359, 376 |
| BspCNI | CTCAG | 2 cut(s) | 34, 571 |
| BspFNI | CGCG | 4 cut(s) | 81, 90, 373, 690 |
| BspLI | GGNNCC | 6 cut(s) | 13, 117, 181, 369, 461, 888 |
| BspPI | GGATC | 6 cut(s) | 198, 337, 454, 467, 881, 894 |
| BspQI | GCTCTTC | 1 cut(s) | 126 |
| BspT104I | TTCGAA | 1 cut(s) | 249 |
| BspT107I | GGYRCC | 2 cut(s) | 179, 367 |
| BspTNI | GGTCTC | 1 cut(s) | 308 |
| BsrBI | CCGCTC | 1 cut(s) | 595 |
| BsrFI | RCCGGY | 2 cut(s) | 31, 334 |
| BsrGI | TGTACA | 1 cut(s) | 712 |
| BsrI | ACTGG | 2 cut(s) | 224, 610 |
| BssAI | RCCGGY | 2 cut(s) | 31, 334 |
| BssECI | CCNNGG | 1 cut(s) | 371 |
| BssMI | GATC | 5 cut(s) | 151, 190, 342, 459, 886 |
| BssNI | GRCGYC | 1 cut(s) | 368 |
| Bst4CI | ACNGT | 2 cut(s) | 667, 708 |
| Bst6I | CTCTTC | 2 cut(s) | 126, 305 |
| BstACI | GRCGYC | 1 cut(s) | 368 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 337 |
| BstAUI | TGTACA | 1 cut(s) | 712 |
| BstBAI | YACGTR | 1 cut(s) | 127 |
| BstBI | TTCGAA | 1 cut(s) | 249 |
| BstC8I | GCNNGC | 3 cut(s) | 33, 692, 699 |
| BstDEI | CTNAG | 3 cut(s) | 42, 558, 987 |
| BstDSI | CCRYGG | 1 cut(s) | 371 |
| BstF5I | GGATG | 1 cut(s) | 606 |
| BstFNI | CGCG | 4 cut(s) | 81, 90, 373, 690 |
| BstH2I | RGCGCY | 2 cut(s) | 371, 1017 |
| BstHHI | GCGC | 5 cut(s) | 83, 90, 141, 370, 1016 |
| BstKTI | GATC | 5 cut(s) | 154, 193, 345, 462, 889 |
| BstMAI | GTCTC | 2 cut(s) | 308, 433 |
| BstMBI | GATC | 5 cut(s) | 151, 190, 342, 459, 886 |
| BstMCI | CGRYCG | 2 cut(s) | 32, 377 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 32, 80, 87, 109, 331, 337, 365, 376 |
| BstSCI | CCNGG | 3 cut(s) | 26, 171, 945 |
| BstSNI | TACGTA | 1 cut(s) | 127 |
| BstUI | CGCG | 4 cut(s) | 81, 90, 373, 690 |
| BstV1I | GCAGC | 4 cut(s) | 115, 121, 148, 343 |
| BstX2I | RGATCY | 3 cut(s) | 151, 459, 886 |
| BstYI | RGATCY | 3 cut(s) | 151, 459, 886 |
| BstZI | CGGCCG | 2 cut(s) | 29, 374 |
| BsuRI | GGCC | 6 cut(s) | 26, 31, 98, 306, 359, 376 |
| BtgI | CCRYGG | 1 cut(s) | 371 |
| BtsCI | GGATG | 1 cut(s) | 606 |
| BtsIMutI | CAGTG | 1 cut(s) | 704 |
| Cac8I | GCNNGC | 3 cut(s) | 33, 692, 699 |
| CciNI | GCGGCCGC | 1 cut(s) | 374 |
| CfoI | GCGC | 5 cut(s) | 83, 90, 141, 370, 1016 |
| Cfr10I | RCCGGY | 2 cut(s) | 31, 334 |
| Cfr13I | GGNCC | 2 cut(s) | 25, 402 |
| Cfr42I | CCGCGG | 1 cut(s) | 374 |
| CpoI | CGGWCCG | 1 cut(s) | 402 |
| CseI | GACGC | 2 cut(s) | 79, 358 |
| Csp6I | GTAC | 5 cut(s) | 555, 663, 713, 748, 913 |
| CspI | CGGWCCG | 1 cut(s) | 402 |
| CviAII | CATG | 4 cut(s) | 272, 805, 880, 1019 |
| CviQI | GTAC | 5 cut(s) | 555, 663, 713, 748, 913 |
| DdeI | CTNAG | 3 cut(s) | 42, 558, 987 |
| DinI | GGCGCC | 1 cut(s) | 369 |
| DpnI | GATC | 5 cut(s) | 153, 192, 344, 461, 888 |
| DpnII | GATC | 5 cut(s) | 151, 190, 342, 459, 886 |
| DraIII | CACNNNGTG | 1 cut(s) | 186 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 290 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 290 |
| EaeI | YGGCCR | 4 cut(s) | 29, 304, 357, 374 |
| EagI | CGGCCG | 2 cut(s) | 29, 374 |
| Eam1104I | CTCTTC | 2 cut(s) | 126, 305 |
| EarI | CTCTTC | 2 cut(s) | 126, 305 |
| EciI | GGCGGA | 1 cut(s) | 785 |
| EclXI | CGGCCG | 2 cut(s) | 29, 374 |
| Eco105I | TACGTA | 1 cut(s) | 127 |
| Eco147I | AGGCCT | 1 cut(s) | 98 |
| Eco31I | GGTCTC | 1 cut(s) | 308 |
| Eco47I | GGWCC | 1 cut(s) | 402 |
| Eco52I | CGGCCG | 2 cut(s) | 29, 374 |
| Eco88I | CYCGRG | 1 cut(s) | 236 |
| EcoRI | GAATTC | 1 cut(s) | 496 |
| EgeI | GGCGCC | 1 cut(s) | 369 |
| EheI | GGCGCC | 1 cut(s) | 369 |
| FaeI | CATG | 4 cut(s) | 275, 808, 883, 1022 |
| FaqI | GGGAC | 1 cut(s) | 296 |
| FatI | CATG | 4 cut(s) | 271, 804, 879, 1018 |
| FauI | CCCGC | 1 cut(s) | 695 |
| FblI | GTMKAC | 1 cut(s) | 294 |
| FokI | GGATG | 1 cut(s) | 613 |
| GlaI | GCGC | 5 cut(s) | 82, 89, 140, 369, 1015 |
| GsaI | CCCAGC | 2 cut(s) | 551, 573 |
| GsuI | CTGGAG | 2 cut(s) | 218, 497 |
| HaeII | RGCGCY | 2 cut(s) | 371, 1017 |
| HaeIII | GGCC | 6 cut(s) | 26, 31, 98, 306, 359, 376 |
| HapII | CCGG | 8 cut(s) | 28, 32, 113, 119, 173, 335, 519, 947 |
| HgaI | GACGC | 2 cut(s) | 79, 358 |
| HhaI | GCGC | 5 cut(s) | 83, 90, 141, 370, 1016 |
| Hin1I | GRCGYC | 1 cut(s) | 368 |
| Hin1II | CATG | 4 cut(s) | 275, 808, 883, 1022 |
| Hin6I | GCGC | 5 cut(s) | 81, 88, 139, 368, 1014 |
| HinP1I | GCGC | 5 cut(s) | 81, 88, 139, 368, 1014 |
| HinfI | GANTC | 5 cut(s) | 200, 232, 276, 397, 847 |
| HpaII | CCGG | 8 cut(s) | 28, 32, 113, 119, 173, 335, 519, 947 |
| HphI | GGTGA | 1 cut(s) | 838 |
| Hpy166II | GTNNAC | 3 cut(s) | 295, 555, 750 |
| Hpy188I | TCNGA | 3 cut(s) | 502, 561, 891 |
| Hpy188III | TCNNGA | 9 cut(s) | 149, 229, 236, 238, 346, 409, 476, 851, 899 |
| Hpy8I | GTNNAC | 3 cut(s) | 295, 555, 750 |
| Hpy99I | CGWCG | 5 cut(s) | 325, 331, 352, 365, 385 |
| HpyAV | CCTTC | 8 cut(s) | 154, 155, 235, 251, 482, 559, 580, 787 |
| HpyCH4III | ACNGT | 2 cut(s) | 667, 708 |
| HpyCH4IV | ACGT | 1 cut(s) | 126 |
| HpyCH4V | TGCA | 1 cut(s) | 952 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 32, 80, 87, 109, 331, 337, 365, 376 |
| HpyF3I | CTNAG | 3 cut(s) | 42, 558, 987 |
| HpySE526I | ACGT | 1 cut(s) | 126 |
| Hsp92I | GRCGYC | 1 cut(s) | 368 |
| Hsp92II | CATG | 4 cut(s) | 275, 808, 883, 1022 |
| HspAI | GCGC | 5 cut(s) | 81, 88, 139, 368, 1014 |
| KasI | GGCGCC | 1 cut(s) | 367 |
| KroI | GCCGGC | 1 cut(s) | 31 |
| KroNI | GCCGGC | 1 cut(s) | 33 |
| KspI | CCGCGG | 1 cut(s) | 374 |
| Kzo9I | GATC | 5 cut(s) | 151, 190, 342, 459, 886 |
| LguI | GCTCTTC | 1 cut(s) | 126 |
| LmnI | GCTCC | 3 cut(s) | 11, 478, 592 |
| Lsp1109I | GCAGC | 4 cut(s) | 115, 121, 148, 343 |
| MaeII | ACGT | 1 cut(s) | 126 |
| MalI | GATC | 5 cut(s) | 153, 192, 344, 461, 888 |
| MbiI | CCGCTC | 1 cut(s) | 595 |
| MboI | GATC | 5 cut(s) | 151, 190, 342, 459, 886 |
| MflI | RGATCY | 3 cut(s) | 151, 459, 886 |
| MluCI | AATT | 5 cut(s) | 204, 496, 526, 716, 728 |
| Mly113I | GGCGCC | 1 cut(s) | 368 |
| MlyI | GAGTC | 1 cut(s) | 209 |
| MroNI | GCCGGC | 1 cut(s) | 31 |
| MroXI | GAANNNNTTC | 1 cut(s) | 245 |
| MslI | CAYNNNNRTG | 1 cut(s) | 968 |
| MspA1I | CMGCKG | 1 cut(s) | 373 |
| MspI | CCGG | 8 cut(s) | 28, 32, 113, 119, 173, 335, 519, 947 |
| MspR9I | CCNGG | 3 cut(s) | 28, 173, 947 |
| MvnI | CGCG | 4 cut(s) | 81, 90, 373, 690 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 32, 80, 87, 109, 331, 337, 365, 376 |
| NaeI | GCCGGC | 1 cut(s) | 33 |
| NarI | GGCGCC | 1 cut(s) | 368 |
| NciI | CCSGG | 3 cut(s) | 28, 173, 947 |
| NdeII | GATC | 5 cut(s) | 151, 190, 342, 459, 886 |
| NgoMIV | GCCGGC | 1 cut(s) | 31 |
| NlaIII | CATG | 4 cut(s) | 275, 808, 883, 1022 |
| NlaIV | GGNNCC | 6 cut(s) | 13, 117, 181, 369, 461, 888 |
| NotI | GCGGCCGC | 1 cut(s) | 374 |
| NspV | TTCGAA | 1 cut(s) | 249 |
| OliI | CACNNNNGTG | 1 cut(s) | 968 |
| PaeR7I | CTCGAG | 1 cut(s) | 236 |
| PceI | AGGCCT | 1 cut(s) | 98 |
| PciSI | GCTCTTC | 1 cut(s) | 126 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 317 |
| PdiI | GCCGGC | 1 cut(s) | 33 |
| PdmI | GAANNNNTTC | 1 cut(s) | 245 |
| PfeI | GAWTC | 4 cut(s) | 232, 276, 397, 847 |
| PflFI | GACNNNGTC | 1 cut(s) | 319 |
| PleI | GAGTC | 1 cut(s) | 208 |
| PluTI | GGCGCC | 1 cut(s) | 371 |
| PpsI | GAGTC | 1 cut(s) | 208 |
| Ppu21I | YACGTR | 1 cut(s) | 127 |
| PsiI | TTATAA | 1 cut(s) | 936 |
| PspFI | CCCAGC | 2 cut(s) | 547, 569 |
| PspN4I | GGNNCC | 6 cut(s) | 13, 117, 181, 369, 461, 888 |
| PspPI | GGNCC | 2 cut(s) | 25, 402 |
| PsuI | RGATCY | 3 cut(s) | 151, 459, 886 |
| PsyI | GACNNNGTC | 1 cut(s) | 319 |
| RsaI | GTAC | 5 cut(s) | 556, 664, 714, 749, 914 |
| RsaNI | GTAC | 5 cut(s) | 555, 663, 713, 748, 913 |
| RseI | CAYNNNNRTG | 1 cut(s) | 968 |
| Rsr2I | CGGWCCG | 1 cut(s) | 402 |
| RsrII | CGGWCCG | 1 cut(s) | 402 |
| SacII | CCGCGG | 1 cut(s) | 374 |
| SapI | GCTCTTC | 1 cut(s) | 126 |
| Sau3AI | GATC | 5 cut(s) | 151, 190, 342, 459, 886 |
| Sau96I | GGNCC | 2 cut(s) | 25, 402 |
| ScaI | AGTACT | 1 cut(s) | 664 |
| SchI | GAGTC | 1 cut(s) | 209 |
| ScrFI | CCNGG | 3 cut(s) | 28, 173, 947 |
| SetI | ASST | 8 cut(s) | 129, 147, 300, 320, 741, 762, 828, 879 |
| SfoI | GGCGCC | 1 cut(s) | 369 |
| Sfr274I | CTCGAG | 1 cut(s) | 236 |
| Sfr303I | CCGCGG | 1 cut(s) | 374 |
| SfuI | TTCGAA | 1 cut(s) | 249 |
| SgrBI | CCGCGG | 1 cut(s) | 374 |
| SinI | GGWCC | 1 cut(s) | 402 |
| SlaI | CTCGAG | 1 cut(s) | 236 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 968 |
| SmlI | CTYRAG | 1 cut(s) | 236 |
| SmoI | CTYRAG | 1 cut(s) | 236 |
| SnaBI | TACGTA | 1 cut(s) | 127 |
| Sse9I | AATT | 5 cut(s) | 204, 496, 526, 716, 728 |
| SseBI | AGGCCT | 1 cut(s) | 98 |
| SspDI | GGCGCC | 1 cut(s) | 367 |
| StuI | AGGCCT | 1 cut(s) | 98 |
| StyD4I | CCNGG | 3 cut(s) | 26, 171, 945 |
| TaaI | ACNGT | 2 cut(s) | 667, 708 |
| TaiI | ACGT | 1 cut(s) | 129 |
| TaqI | TCGA | 7 cut(s) | 230, 237, 249, 383, 720, 741, 850 |
| TaqII | GACCGA | 1 cut(s) | 390 |
| TasI | AATT | 5 cut(s) | 204, 496, 526, 716, 728 |
| TatI | WGTACW | 5 cut(s) | 554, 662, 712, 747, 912 |
| TauI | GCSGC | 9 cut(s) | 38, 53, 109, 167, 373, 376, 379, 535, 697 |
| TfiI | GAWTC | 4 cut(s) | 232, 276, 397, 847 |
| TscAI | CASTG | 1 cut(s) | 711 |
| TseI | GCWGC | 4 cut(s) | 103, 109, 136, 331 |
| TspDTI | ATGAA | 7 cut(s) | 260, 461, 599, 617, 647, 793, 995 |
| TspGWI | ACGGA | 3 cut(s) | 326, 394, 1023 |
| TspRI | CASTG | 1 cut(s) | 711 |
| Tth111I | GACNNNGTC | 1 cut(s) | 319 |
| VpaK11BI | GGWCC | 1 cut(s) | 402 |
| XapI | RAATTY | 3 cut(s) | 496, 526, 728 |
| XhoI | CTCGAG | 1 cut(s) | 236 |
| XmiI | GTMKAC | 1 cut(s) | 294 |
| XmnI | GAANNNNTTC | 1 cut(s) | 245 |
| ZrmI | AGTACT | 1 cut(s) | 664 |