Rorug02G0634500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000661
Physical Location & Seq
Forward (+)
74843614 .. 74845489
1876 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0634500.1

Sequence Viewer

Length: 1767 bp
ATGAAAGGACCGAAACCACGTAACAACAATAGGAAGAGACCACCGCGCAACGACACCAATTCCTGGATTAGGATCTTCTGGTGCACCATCTTCATCTTCTTCAACTTCCTCCTCCTCTCCGGCTTCACCTTCTCCACTTTCCGGCTCCTCTTCGGAAAAACATTTCGACCAGGACTAAGATGGCCAACTGTAACAAAAACCGCCGTAACCGCCGACTCTCCGGTCACCATTTCCGTCCGAGAAGTAGTTAGCCTGCCGGACCAGTCACTGGTTTTTCTAAACTACCCTCGAACCGGTCGCTTATTTACAAAGGAGGAAATCGACTGCATTTACTTCTCAGCTAATGACCTCTCCGCCCGGACTCTCTTCAAGCAACCGCCGCTCGACATGGACAGCGAGGATCCCTACAACCAGATCGTACGGTGCCCGCTGCAGTCCGGAGACGGCTTTAGGGTTTCAGTTGGTTTAAAAAAGCAAAACAGCGACTTAACGTCAGTGCCGACGTACACGTGGGACTCACTGGCGTACGATGCGGTCATTGACCACGACAACACCACCGTCGTCTTCGTGAAAGGACTCAACTTACGGCCAGATAGGGTTTCAAATGCCTCGAGATACGAGTGCTTGTACGGCTGGGATTTCAGCACGTCCAACTATTTGTTGCGGTCCGACGTCGTTTCTTTGGCGCAGGAGATCGTACGGTGTAAAACGCCGTTGAGTGTGTTGATCAGGAACAAACGTGGGGTGAATGATGCGGTGAAGGTTTCAGTTAGGTTTAAAGGGAGAACAACAATAGTGGACACTATAGCCCGGCCGGGGCTCCGGCCCGGACTCGTCGAACCGCCCCGGAATAAAGAGCACGTAATGTGTATATGCTCCATGGTGAGGAACCAGGGTCGGTTCTTGAAGGAATGGGTCATGTACCATGCTGAAATGGGAGTGCAACGTTGGTTTATTTACGACAACAATAGTGATGATGAAACTGATGTCGTTATTGAGCTTCTACAGAGTGGGAACTACAATATTACCCGGCACCTGTGGCCTTGGATCAAGACCCAGGAGGCCGGGTTCGCGCATTGCGCGTTACGGGCACGCGAGACTTGCCAGTGGGTTGGGTTTATTGATGTGGACGAGTTTTTTCACATGCCTTCGGGGTTATTATTACATGACGTGCTGCGCAACCAGTCCAAGTATGGTTATGGTGAGGTTCAGGCTTGGTGCTATAGTTTTGGGCCGTCGGGCCTCAAGAGTGTCCCGATTCAGGGCGTGACAGTGGGGTACACTTGTCGCGTGGCGGCCCCGGAGAGGCACAAGAGCATTGTGAAGCCGGAGGCGTTGGATTCGACATTGATGAATGTGGTGCACCATTTCAAACTTAGAAATGGTTACGAGGCAGTGAAAGCGGATAGGGGAGTGTTGGTTATCAATCACTACAAGTACCAAGTGTGGGAGGTTTTTAAGGAGAAGTTCTATAGGAGAGTGGCGACCTATGTGGCGGACTGGCAGGAGGAGCAGAATGTGGGTTCCAAGGATCGAGCCCCGGGATTGGGGACGAAGGCGGTGGAGCCACCTGATTGGCCGGAGAGGTTTTGCGAGGTTAATGACACTGGACTTAGGAACCGGGTGTTGAAGAACTTGGCTGATCCGTATACAAGGCTTTTGCCGTGGCAGGAGGGTTATCAAAAACATGAGAAGAGAAGGGAGAGAAGGAGAAAGAGAAAGAGACGAAAGCATAGAGGTTATTTATATATGACTCTTGTGTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

588

Amino Acids

68.23

Weight (kDa)

9.53

Isoelectric Point (pI)

40.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_92 PF01697 285 - 500 1.3e-37 Glycosyltransferase family 92
Glyco_tranf_2_4 PF13704 296 - 384 2.8e-12 Glycosyl transferase family 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000661)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10010
fragaria_vesca FvH4_6g03222 FvH4_6g03560 FvH4_6g03561 FvH4_6g03563 FvH4_6g03590 FvH4_6g03590 FvH4_6g09260
malus_domestica MD04G1220200.v1.1 MD12G1240700.v1.1 MD15G1083500.v1.1
prunus_persica Prupe.1G436000_v2.0.a1 Prupe.6G174800_v2.0.a1 Prupe.6G339200_v2.0.a1
pyrus_communis pycom08g08260 pycom15g07800 pycom15g07810
rosa_chinensis RchiOBHm_Chr3g0451551 RchiOBHm_Chr3g0451591 RchiOBHm_Chr3g0451621 RchiOBHm_Chr3g0452131 RchiOBHm_Chr3g0459621
rosa_laevigata RLG00000025074 RLG00000025077 RLG00000025626 RLG00000029505 RLG00000035382 RLG00000035384
rosa_multiflora Rmu_co8173672.1_g000001 Rmu_sc0000240.1_g000011 Rmu_sc0000240.1_g000014 Rmu_sc0004924.1_g000012 Rmu_sc0004924.1_g000020 Rmu_sc0004924.1_g000023 Rmu_sc0004924.1_g000025 Rmu_sc0004924.1_g000034 Rmu_sc0004924.1_g000035 Rmu_sc0009360.1_g000006 Rmu_sc0009360.1_g000008 Rmu_sc0009360.1_g000014 Rmu_sc0009360.1_g000047 Rmu_sc0011887.1_g000001 Rmu_sc0015119.1_g000001 Rmu_sc0023706.1_g000002
rosa_roxburghii Rroxscaffold_164G00436050 Rroxscaffold_164G00436390 Rroxscaffold_164G00436450 Rroxscaffold_164G00436460 Rroxscaffold_4G00317080 Rroxscaffold_4G00317090 Rroxscaffold_6G00420140 Rroxscaffold_6G00428920
rosa_rugosa Rorug02G0634200 Rorug02G0634500 Rorug02G0634700 Rorug02G0635400 Rorug02G0638500 Rorug03G0036600 Rorug03G0036700
rosa_samantha Rh1BG103700 Rh1BG103800 Rh3AG040400 Rh3BG037900 Rh3BG038200 Rh3BG041900 Rh3BG097900 Rh3CG036600 Rh3CG040300 Rh3DG037300 Rh3DG037500 Rh3DG041200 Rh3DG099300
rosa_wichuraiana Rw0G013830 Rw0G017580 Rw0G017600 Rw3G003070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 221
AatII GACGTC 1 cut(s) 675
Acc16I TGCGCA 1 cut(s) 1178
AccB1I GGYRCC 2 cut(s) 423, 1032
AccB7I CCANNNNNTGG 2 cut(s) 63, 268
AccBSI CCGCTC 1 cut(s) 382
AccI GTMKAC 1 cut(s) 1649
AccII CGCG 5 cut(s) 46, 1073, 1082, 1095, 1290
AccIII TCCGGA 1 cut(s) 437
AclI AACGTT 1 cut(s) 946
AclWI GGATC 6 cut(s) 80, 395, 408, 1055, 1539, 1637
AcoI YGGCCR 4 cut(s) 182, 587, 812, 1577
AcvI CACGTG 1 cut(s) 510
AcyI GRCGYC 1 cut(s) 672
AfaI GTAC 8 cut(s) 420, 506, 527, 629, 699, 923, 1280, 1439
AflIII ACRYGT 1 cut(s) 507
AgeI ACCGGT 1 cut(s) 293
AgsI TTSAA 6 cut(s) 103, 370, 603, 907, 1372, 1630
AhdI GACNNNNNGTC 1 cut(s) 490
AjiI CACGTC 2 cut(s) 648, 1171
AjnI CCWGG 4 cut(s) 62, 169, 891, 1056
AloI GAACNNNNNNTCC 2 cut(s) 1052, 1084
AluBI AGCT 2 cut(s) 341, 1000
AluI AGCT 2 cut(s) 341, 1000
Alw21I GWGCWC 3 cut(s) 86, 861, 1365
Alw26I GTCTC 4 cut(s) 31, 435, 1091, 1717
Alw44I GTGCAC 2 cut(s) 82, 1361
AlwI GGATC 6 cut(s) 80, 395, 408, 1055, 1539, 1637
AlwNI CAGNNNCTG 1 cut(s) 268
Ama87I CYCGRG 2 cut(s) 610, 1540
Aor13HI TCCGGA 1 cut(s) 437
ApaLI GTGCAC 2 cut(s) 82, 1361
ApeKI GCWGC 2 cut(s) 430, 1174
AsiGI ACCGGT 1 cut(s) 293
AspLEI GCGC 5 cut(s) 48, 688, 1075, 1082, 1179
AspS9I GGNCC 7 cut(s) 8, 259, 666, 825, 1232, 1240, 1297
AsuHPI GGTGA 6 cut(s) 118, 217, 757, 769, 895, 1214
AvaI CYCGRG 2 cut(s) 610, 1540
AvaII GGWCC 3 cut(s) 8, 259, 666
BaeGI GKGCMC 4 cut(s) 86, 428, 1093, 1365
BaeI ACNNNNGTAYC 2 cut(s) 1270, 1303
BalI TGGCCA 1 cut(s) 184
BamHI GGATCC 1 cut(s) 400
BanI GGYRCC 2 cut(s) 423, 1032
BanII GRGCYC 2 cut(s) 822, 1540
BbrPI CACGTG 1 cut(s) 510
BbsI GAAGAC 1 cut(s) 556
Bbv12I GWGCWC 3 cut(s) 86, 861, 1365
BbvI GCAGC 2 cut(s) 417, 1161
BccI CCATC 2 cut(s) 95, 174
BceAI ACGGC 7 cut(s) 188, 460, 602, 646, 697, 1219, 1648
BciT130I CCWGG 4 cut(s) 64, 171, 893, 1058
BclI TGATCA 1 cut(s) 726
BcoDI GTCTC 4 cut(s) 31, 435, 1091, 1717
BfmI CTRYAG 5 cut(s) 431, 804, 1004, 1222, 1471
BisI GCNGC 4 cut(s) 380, 431, 1175, 1296
BlsI GCNGC 4 cut(s) 381, 432, 1176, 1297
Bme18I GGWCC 3 cut(s) 8, 259, 666
BmeRI GACNNNNNGTC 1 cut(s) 490
BmeT110I CYCGRG 2 cut(s) 610, 1540
BmgBI CACGTC 2 cut(s) 648, 1171
BmgT120I GGNCC 7 cut(s) 8, 259, 666, 825, 1232, 1240, 1297
BmsI GCATC 2 cut(s) 520, 742
BpiI GAAGAC 1 cut(s) 556
BpuEI CTTGAG 1 cut(s) 1229
BsaAI YACGTR 3 cut(s) 20, 510, 862
BsaBI GATNNNNATC 1 cut(s) 71
BsaHI GRCGYC 1 cut(s) 672
BsaI GGTCTC 1 cut(s) 31
BsaWI WCCGGW 3 cut(s) 220, 293, 437
BsaXI ACNNNNNCTCC 4 cut(s) 1052, 1082, 1404, 1434
Bse118I RCCGGY 1 cut(s) 293
Bse1I ACTGG 7 cut(s) 262, 273, 525, 1105, 1183, 1505, 1612
Bse3DI GCAATG 1 cut(s) 1075
Bse8I GATNNNNATC 1 cut(s) 71
BseAI TCCGGA 1 cut(s) 437
BseBI CCWGG 4 cut(s) 64, 171, 893, 1058
BseJI GATNNNNATC 1 cut(s) 71
BseMI GCAATG 1 cut(s) 1075
BseMII CTCAG 1 cut(s) 351
BseNI ACTGG 7 cut(s) 262, 273, 525, 1105, 1183, 1505, 1612
BseRI GAGGAG 4 cut(s) 101, 104, 137, 1523
BseSI GKGCMC 4 cut(s) 86, 428, 1093, 1365
BseX3I CGGCCG 1 cut(s) 812
BseXI GCAGC 2 cut(s) 417, 1161
BseYI CCCAGC 1 cut(s) 633
Bsh1236I CGCG 5 cut(s) 46, 1073, 1082, 1095, 1290
Bsh1285I CGRYCG 2 cut(s) 298, 815
BshNI GGYRCC 2 cut(s) 423, 1032
BshTI ACCGGT 1 cut(s) 293
BsiEI CGRYCG 2 cut(s) 298, 815
BsiHKAI GWGCWC 3 cut(s) 86, 861, 1365
BsiHKCI CYCGRG 2 cut(s) 610, 1540
BsiWI CGTACG 3 cut(s) 418, 525, 697
BslFI GGGAC 3 cut(s) 527, 1238, 1564
BsmAI GTCTC 4 cut(s) 31, 435, 1091, 1717
BsmBI CGTCTC 2 cut(s) 435, 1717
BsmFI GGGAC 3 cut(s) 527, 1238, 1564
Bso31I GGTCTC 1 cut(s) 31
BsoBI CYCGRG 2 cut(s) 610, 1540
Bsp1286I GDGCHC 7 cut(s) 86, 428, 822, 861, 1093, 1365, 1540
Bsp13I TCCGGA 1 cut(s) 437
Bsp143I GATC 8 cut(s) 72, 400, 414, 693, 726, 1047, 1531, 1642
Bsp19I CCATGG 1 cut(s) 879
BspCNI CTCAG 1 cut(s) 350
BspEI TCCGGA 1 cut(s) 437
BspFNI CGCG 5 cut(s) 46, 1073, 1082, 1095, 1290
BspMAI CTGCAG 1 cut(s) 435
BspPI GGATC 6 cut(s) 80, 395, 408, 1055, 1539, 1637
BspT107I GGYRCC 2 cut(s) 423, 1032
BspTNI GGTCTC 1 cut(s) 31
BsrBI CCGCTC 1 cut(s) 382
BsrDI GCAATG 1 cut(s) 1075
BsrFI RCCGGY 1 cut(s) 293
BsrI ACTGG 7 cut(s) 262, 273, 525, 1105, 1183, 1505, 1612
BssAI RCCGGY 1 cut(s) 293
BssMI GATC 8 cut(s) 72, 400, 414, 693, 726, 1047, 1531, 1642
BssNAI GTATAC 1 cut(s) 1650
BssNI GRCGYC 1 cut(s) 672
BssT1I CCWWGG 3 cut(s) 879, 1043, 1527
Bst1107I GTATAC 1 cut(s) 1650
Bst2UI CCWGG 4 cut(s) 64, 171, 893, 1058
Bst4CI ACNGT 5 cut(s) 190, 423, 559, 702, 1273
Bst6I CTCTTC 4 cut(s) 29, 155, 371, 1688
BstACI GRCGYC 1 cut(s) 672
BstBAI YACGTR 3 cut(s) 20, 510, 862
BstC8I GCNNGC 3 cut(s) 254, 428, 1093
BstDEI CTNAG 4 cut(s) 176, 337, 1376, 1613
BstDSI CCRYGG 2 cut(s) 879, 1664
BstEII GGTNACC 1 cut(s) 223
BstENI CCTNNNNNAGG 1 cut(s) 67
BstFNI CGCG 5 cut(s) 46, 1073, 1082, 1095, 1290
BstHHI GCGC 5 cut(s) 48, 688, 1075, 1082, 1179
BstKTI GATC 8 cut(s) 75, 403, 417, 696, 729, 1050, 1534, 1645
BstMAI GTCTC 4 cut(s) 31, 435, 1091, 1717
BstMBI GATC 8 cut(s) 72, 400, 414, 693, 726, 1047, 1531, 1642
BstMCI CGRYCG 2 cut(s) 298, 815
BstNI CCWGG 4 cut(s) 64, 171, 893, 1058
BstNSI RCATGY 1 cut(s) 1147
BstPI GGTNACC 1 cut(s) 223
BstSFI CTRYAG 5 cut(s) 431, 804, 1004, 1222, 1471
BstSLI GKGCMC 4 cut(s) 86, 428, 1093, 1365
BstUI CGCG 5 cut(s) 46, 1073, 1082, 1095, 1290
BstV1I GCAGC 2 cut(s) 417, 1161
BstV2I GAAGAC 1 cut(s) 556
BstX2I RGATCY 2 cut(s) 72, 400
BstXI CCANNNNNNTGG 2 cut(s) 1112, 1575
BstYI RGATCY 2 cut(s) 72, 400
BstZ17I GTATAC 1 cut(s) 1650
BstZI CGGCCG 1 cut(s) 812
BtgI CCRYGG 2 cut(s) 879, 1664
BtrI CACGTC 2 cut(s) 648, 1171
BtsI GCAGTG 1 cut(s) 1401
BtsIMutI CAGTG 7 cut(s) 266, 501, 518, 1112, 1278, 1401, 1605
Cac8I GCNNGC 3 cut(s) 254, 428, 1093
CaiI CAGNNNCTG 1 cut(s) 268
CfoI GCGC 5 cut(s) 48, 688, 1075, 1082, 1179
Cfr10I RCCGGY 1 cut(s) 293
Cfr13I GGNCC 7 cut(s) 8, 259, 666, 825, 1232, 1240, 1297
Cfr9I CCCGGG 1 cut(s) 1540
CpoI CGGWCCG 1 cut(s) 666
Csp6I GTAC 8 cut(s) 419, 505, 526, 628, 698, 922, 1279, 1438
CspAI ACCGGT 1 cut(s) 293
CspCI CAANNNNNGTGG 2 cut(s) 777, 812
CspI CGGWCCG 1 cut(s) 666
CviAII CATG 7 cut(s) 388, 880, 919, 926, 1144, 1166, 1688
CviQI GTAC 8 cut(s) 419, 505, 526, 628, 698, 922, 1279, 1438
DdeI CTNAG 4 cut(s) 176, 337, 1376, 1613
DpnI GATC 8 cut(s) 74, 402, 416, 695, 728, 1049, 1533, 1644
DpnII GATC 8 cut(s) 72, 400, 414, 693, 726, 1047, 1531, 1642
DraI TTTAAA 2 cut(s) 468, 778
DrdI GACNNNNNNGTC 1 cut(s) 221
DriI GACNNNNNGTC 1 cut(s) 490
DseDI GACNNNNNNGTC 1 cut(s) 221
EaeI YGGCCR 4 cut(s) 182, 587, 812, 1577
EagI CGGCCG 1 cut(s) 812
Eam1104I CTCTTC 4 cut(s) 29, 155, 371, 1688
Eam1105I GACNNNNNGTC 1 cut(s) 490
EarI CTCTTC 4 cut(s) 29, 155, 371, 1688
EciI GGCGGA 2 cut(s) 343, 1511
EclXI CGGCCG 1 cut(s) 812
Eco130I CCWWGG 3 cut(s) 879, 1043, 1527
Eco24I GRGCYC 2 cut(s) 822, 1540
Eco31I GGTCTC 1 cut(s) 31
Eco47I GGWCC 3 cut(s) 8, 259, 666
Eco52I CGGCCG 1 cut(s) 812
Eco72I CACGTG 1 cut(s) 510
Eco88I CYCGRG 2 cut(s) 610, 1540
Eco91I GGTNACC 1 cut(s) 223
EcoNI CCTNNNNNAGG 1 cut(s) 67
EcoO65I GGTNACC 1 cut(s) 223
EcoRII CCWGG 4 cut(s) 62, 169, 891, 1056
EcoT14I CCWWGG 3 cut(s) 879, 1043, 1527
EcoT38I GRGCYC 2 cut(s) 822, 1540
ErhI CCWWGG 3 cut(s) 879, 1043, 1527
Esp3I CGTCTC 2 cut(s) 435, 1717
FaeI CATG 7 cut(s) 391, 883, 922, 929, 1147, 1169, 1691
FaqI GGGAC 3 cut(s) 527, 1238, 1564
FatI CATG 7 cut(s) 387, 879, 918, 925, 1143, 1165, 1687
FauI CCCGC 1 cut(s) 435
FbaI TGATCA 1 cut(s) 726
FblI GTMKAC 1 cut(s) 1649
Fnu4HI GCNGC 4 cut(s) 380, 431, 1175, 1296
FriOI GRGCYC 2 cut(s) 822, 1540
Fsp4HI GCNGC 4 cut(s) 380, 431, 1175, 1296
FspI TGCGCA 1 cut(s) 1178
GlaI GCGC 5 cut(s) 47, 687, 1074, 1081, 1178
GluI GCNGC 4 cut(s) 380, 431, 1175, 1296
GsaI CCCAGC 1 cut(s) 637
HhaI GCGC 5 cut(s) 48, 688, 1075, 1082, 1179
Hin1I GRCGYC 1 cut(s) 672
Hin1II CATG 7 cut(s) 391, 883, 922, 929, 1147, 1169, 1691
Hin6I GCGC 5 cut(s) 46, 686, 1073, 1080, 1177
HinP1I GCGC 5 cut(s) 46, 686, 1073, 1080, 1177
HinfI GANTC 8 cut(s) 215, 361, 515, 576, 831, 1258, 1340, 1753
HphI GGTGA 6 cut(s) 118, 217, 757, 769, 895, 1214
Hpy166II GTNNAC 7 cut(s) 84, 507, 799, 1129, 1281, 1363, 1650
Hpy188I TCNGA 3 cut(s) 155, 239, 670
Hpy188III TCNNGA 8 cut(s) 438, 568, 612, 730, 904, 1051, 1246, 1255
Hpy8I GTNNAC 7 cut(s) 84, 507, 799, 1129, 1281, 1363, 1650
Hpy99I CGWCG 6 cut(s) 505, 563, 674, 677, 839, 1240
HpyAV CCTTC 7 cut(s) 139, 754, 901, 1158, 1549, 1692, 1701
HpyCH4III ACNGT 5 cut(s) 190, 423, 559, 702, 1273
HpyCH4V TGCA 5 cut(s) 84, 327, 433, 943, 1363
HpyF3I CTNAG 4 cut(s) 176, 337, 1376, 1613
Hsp92I GRCGYC 1 cut(s) 672
Hsp92II CATG 7 cut(s) 391, 883, 922, 929, 1147, 1169, 1691
HspAI GCGC 5 cut(s) 46, 686, 1073, 1080, 1177
Kpn2I TCCGGA 1 cut(s) 437
Ksp22I TGATCA 1 cut(s) 726
Kzo9I GATC 8 cut(s) 72, 400, 414, 693, 726, 1047, 1531, 1642
LmnI GCTCC 5 cut(s) 150, 825, 881, 1510, 1564
Lsp1109I GCAGC 2 cut(s) 417, 1161
LweI GCATC 2 cut(s) 520, 742
MaeIII GTNAC 8 cut(s) 20, 190, 205, 223, 264, 1083, 1267, 1385
MalI GATC 8 cut(s) 74, 402, 416, 695, 728, 1049, 1533, 1644
MbiI CCGCTC 1 cut(s) 382
MboI GATC 8 cut(s) 72, 400, 414, 693, 726, 1047, 1531, 1642
MflI RGATCY 2 cut(s) 72, 400
MhlI GDGCHC 7 cut(s) 86, 428, 822, 861, 1093, 1365, 1540
MlsI TGGCCA 1 cut(s) 184
MluCI AATT 1 cut(s) 58
MluNI TGGCCA 1 cut(s) 184
MlyI GAGTC 6 cut(s) 209, 355, 509, 570, 825, 1747
MmeI TCCRAC 3 cut(s) 675, 693, 1317
Mox20I TGGCCA 1 cut(s) 184
MroI TCCGGA 1 cut(s) 437
MscI TGGCCA 1 cut(s) 184
MseI TTAA 5 cut(s) 467, 488, 777, 1458, 1599
Msp20I TGGCCA 1 cut(s) 184
MspA1I CMGCKG 1 cut(s) 430
MvaI CCWGG 4 cut(s) 64, 171, 893, 1058
MvnI CGCG 5 cut(s) 46, 1073, 1082, 1095, 1290
NcoI CCATGG 1 cut(s) 879
NdeII GATC 8 cut(s) 72, 400, 414, 693, 726, 1047, 1531, 1642
NlaIII CATG 7 cut(s) 391, 883, 922, 929, 1147, 1169, 1691
NmuCI GTSAC 3 cut(s) 223, 264, 1267
NsbI TGCGCA 1 cut(s) 1178
NspI RCATGY 1 cut(s) 1147
PaeR7I CTCGAG 1 cut(s) 610
PcsI WCGNNNNNNNCGW 1 cut(s) 497
PfeI GAWTC 2 cut(s) 1258, 1340
Pfl23II CGTACG 3 cut(s) 418, 525, 697
PflMI CCANNNNNTGG 2 cut(s) 63, 268
PfoI TCCNGGA 1 cut(s) 62
PinAI ACCGGT 1 cut(s) 293
PkrI GCNGC 4 cut(s) 381, 432, 1176, 1297
PleI GAGTC 6 cut(s) 209, 355, 509, 570, 825, 1747
PmaCI CACGTG 1 cut(s) 510
PmlI CACGTG 1 cut(s) 510
PpsI GAGTC 6 cut(s) 209, 355, 509, 570, 825, 1747
Ppu21I YACGTR 3 cut(s) 20, 510, 862
Psp1406I AACGTT 1 cut(s) 946
Psp6I CCWGG 4 cut(s) 62, 169, 891, 1056
PspCI CACGTG 1 cut(s) 510
PspEI GGTNACC 1 cut(s) 223
PspFI CCCAGC 1 cut(s) 633
PspGI CCWGG 4 cut(s) 62, 169, 891, 1056
PspLI CGTACG 3 cut(s) 418, 525, 697
PspPI GGNCC 7 cut(s) 8, 259, 666, 825, 1232, 1240, 1297
PstI CTGCAG 1 cut(s) 435
PstNI CAGNNNCTG 1 cut(s) 268
PsuI RGATCY 2 cut(s) 72, 400
RsaI GTAC 8 cut(s) 420, 506, 527, 629, 699, 923, 1280, 1439
RsaNI GTAC 8 cut(s) 419, 505, 526, 628, 698, 922, 1279, 1438
Rsr2I CGGWCCG 1 cut(s) 666
RsrII CGGWCCG 1 cut(s) 666
SaqAI TTAA 5 cut(s) 467, 488, 777, 1458, 1599
SatI GCNGC 4 cut(s) 380, 431, 1175, 1296
Sau3AI GATC 8 cut(s) 72, 400, 414, 693, 726, 1047, 1531, 1642
Sau96I GGNCC 7 cut(s) 8, 259, 666, 825, 1232, 1240, 1297
SchI GAGTC 6 cut(s) 209, 355, 509, 570, 825, 1747
SduI GDGCHC 7 cut(s) 86, 428, 822, 861, 1093, 1365, 1540
SfaNI GCATC 2 cut(s) 520, 742
SfcI CTRYAG 5 cut(s) 431, 804, 1004, 1222, 1471
Sfr274I CTCGAG 1 cut(s) 610
SinI GGWCC 3 cut(s) 8, 259, 666
SlaI CTCGAG 1 cut(s) 610
SmaI CCCGGG 1 cut(s) 1542
SmlI CTYRAG 2 cut(s) 610, 1244
SmoI CTYRAG 2 cut(s) 610, 1244
Sse9I AATT 1 cut(s) 58
SspI AATATT 1 cut(s) 1024
StyI CCWWGG 3 cut(s) 879, 1043, 1527
TaaI ACNGT 5 cut(s) 190, 423, 559, 702, 1273
TaqI TCGA 8 cut(s) 166, 289, 321, 384, 611, 837, 1343, 1534
TaqII GACCGA 1 cut(s) 25
TasI AATT 1 cut(s) 58
TauI GCSGC 2 cut(s) 382, 1298
TfiI GAWTC 2 cut(s) 1258, 1340
Tru1I TTAA 5 cut(s) 467, 488, 777, 1458, 1599
Tru9I TTAA 5 cut(s) 467, 488, 777, 1458, 1599
TscAI CASTG 7 cut(s) 273, 501, 525, 1112, 1278, 1401, 1612
TseFI GTSAC 3 cut(s) 223, 264, 1267
TseI GCWGC 2 cut(s) 430, 1174
Tsp45I GTSAC 3 cut(s) 223, 264, 1267
TspDTI ATGAA 4 cut(s) 17, 82, 993, 1367
TspGWI ACGGA 2 cut(s) 223, 1635
TspMI CCCGGG 1 cut(s) 1540
TspRI CASTG 7 cut(s) 273, 501, 525, 1112, 1278, 1401, 1612
Van91I CCANNNNNTGG 2 cut(s) 63, 268
VneI GTGCAC 2 cut(s) 82, 1361
VpaK11BI GGWCC 3 cut(s) 8, 259, 666
XagI CCTNNNNNAGG 1 cut(s) 67
XceI RCATGY 1 cut(s) 1147
XcmI CCANNNNNNNNNTGG 2 cut(s) 177, 1190
XhoI CTCGAG 1 cut(s) 610
XmaI CCCGGG 1 cut(s) 1540
XmiI GTMKAC 1 cut(s) 1649
ZraI GACGTC 1 cut(s) 673
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.