Rorug05G0410200

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0001007
Physical Location & Seq
Reverse (-)
56605280 .. 56632385
27106 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0410200.1

Sequence Viewer

Length: 1593 bp
ATGGCAGAAGCTGAGGGCGAACCAGGAAGCTCCATGCATGGAGTCACAGGAAGAGAGCAAACATTTGCATTCTCGGTGGCTTCACCTATTGTCCCGACTGATAACACAGCAAAATTTGACCTGCCAGTTGATTCTGAGCACAAGGCTAAAGTCTTCAAGATTTTCTCTTTGGCCAATCCTCATATGAGAACCTTCCACCTATCTTGGATCTCCTTCTTCACTTGCTTTGTATCGACTTTCGCTGCTGCTCCCCTCGTCCCTATCATCCGTGACAACCTCAACCTCACCAAGCAAGACATCGGAAATGCTGGAGTTGCTTCTGTTTCAGGGAGTATATTCTCTAGGCTTGTAATGGGCGCCGTATGCGACTTACTTGGACCAAGATATGGGTGTGCATTTCTCGTAATGCTTAGCGCACCCACAGTGTTTTGCATGTCATTTGTAGCAGATGCTGGGGGTTACTTAGCCGTGAGGTTCATGATTGGTTTCTCTCTGGCTACATTTGTTTCTTGCCAGTACTGGATGAGCACCATGTTCAACAGCAAGATCATAGGTTTAGTCAATGGAACAGCAGCAGGGTGGGGTAACATGGGTGGTGGCGCCACTCAGCTCTTGATGCCTCTGGTGTTTGATATTATCGGCAGAGCCGGAGCAACTCCTTTCACTGCTTGGAGAATTGCCTTCTTCATTCCTGGTTGGCTTCATATCATTATGGGCATAATGGTCTTGACTCTTGGCCAAGACTTGCCCGATGGGAATCTTGGTGCCCTACAAAAGAAGGGTGAAGTTGCGAAAGATGAATTTAAAAAGGTGTTGTGGTACGCTATCACAAACTACAGGACGTGGGTCTTTGTCCTTCTCTATGGCTACTCCATGGGCGTTGAGTTGTCAACTGATAATGTCATTGCAGAATATTTCTATGACAGATTCAACCTCAAGCTTCACACTGCCGGGCTCATTGCCGCCACATTCGGCATGGCCAACTTCATAGCTCGACCCTTTGGTGGGTATGCTTCCGATCTAGCAGCCAGGTATTTTGGCATGAGGGGTAGGCTGTGGACCCTCTGGATCCTCCAAAGCCTAGGAGGAGTCTTCTGCATCTGGCTCGGCCGAGCCAGCACGCTCCCCATCGCCGTCACGGCCATGATCCTCTTCTCCGTAGGCGCTCAGGCCGCCTGTGGCGCAACTTTTGGAATCATCCCATTCATTTCACGACGATCCCTAGGGATCATATCCGGTCTCACCGGTGCTGGCGGGAACTTTGGCTCCGGACTAACCCAACTCGTGTTTTTCTCATCCTCAGCCTTCTCCACAGGCACTGGTCTATCCTGGATGGGGGTTATGATCGTGTGCTGCACTTTGCCAGTGACTTTGGTTCATTTTCCACAGTGGGGAAGCATGTTCCTCCCAGCTTCTCAACACGTTGAGAAATCTACTGAAGAGTTTTATTATGGGTCTGAGTGGACAGAGGAAGAGAAGCAAAAGGGTTTGCACCAGCAGAGTATCAAATTTGCCGAGAATAGTAGGTCTGAGCGTGGTAGGCGCGTGGCCTCTGCTCCGACTCCACCCAACACCACACCTTCTCATGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_24

Protein Analysis

530

Amino Acids

57.5

Weight (kDa)

8.65

Isoelectric Point (pI)

38.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 69 - 425 1.4e-21 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 129
AccB1I GGYRCC 3 cut(s) 356, 599, 764
AccB7I CCANNNNNTGG 1 cut(s) 386
AccII CGCG 1 cut(s) 1545
AccIII TCCGGA 1 cut(s) 1268
AciI CCGC 3 cut(s) 963, 1173, 1254
AclWI GGATC 6 cut(s) 215, 1063, 1076, 1141, 1212, 1235
AcoI YGGCCR 5 cut(s) 171, 736, 978, 1108, 1140
AcsI RAATTY 3 cut(s) 113, 800, 1508
AcuI CTGAAG 1 cut(s) 1458
AcyI GRCGYC 2 cut(s) 357, 600
AfaI GTAC 2 cut(s) 518, 821
AfiI CCNNNNNNNGG 5 cut(s) 386, 1004, 1005, 1335, 1391
AflIII ACRYGT 1 cut(s) 1420
AgeI ACCGGT 1 cut(s) 1244
AgsI TTSAA 3 cut(s) 157, 538, 931
AjiI CACGTC 1 cut(s) 843
AjnI CCWGG 4 cut(s) 22, 691, 1028, 1328
AloI GAACNNNNNNTCC 2 cut(s) 1250, 1282
AluBI AGCT 6 cut(s) 11, 30, 610, 940, 992, 1412
AluI AGCT 6 cut(s) 11, 30, 610, 940, 992, 1412
Alw21I GWGCWC 2 cut(s) 141, 530
Alw26I GTCTC 1 cut(s) 1244
AlwI GGATC 6 cut(s) 215, 1063, 1076, 1141, 1212, 1235
AlwNI CAGNNNCTG 3 cut(s) 11, 452, 1319
Aor13HI TCCGGA 1 cut(s) 1268
AoxI GGCC 7 cut(s) 171, 736, 978, 1108, 1140, 1170, 1548
ApeKI GCWGC 5 cut(s) 242, 245, 572, 1025, 1353
ApoI RAATTY 3 cut(s) 113, 800, 1508
AsiGI ACCGGT 1 cut(s) 1244
AspA2I CCTAGG 2 cut(s) 1081, 1222
AspLEI GCGC 6 cut(s) 359, 416, 602, 1166, 1184, 1545
AspS9I GGNCC 2 cut(s) 377, 1059
AsuC2I CCSGG 1 cut(s) 952
AsuHPI GGTGA 4 cut(s) 75, 277, 794, 1234
AvaII GGWCC 2 cut(s) 377, 1059
AvrII CCTAGG 2 cut(s) 1081, 1222
BaeGI GKGCMC 1 cut(s) 769
BalI TGGCCA 3 cut(s) 173, 738, 980
BamHI GGATCC 1 cut(s) 1068
BanI GGYRCC 3 cut(s) 356, 599, 764
BanII GRGCYC 1 cut(s) 957
BauI CACGAG 1 cut(s) 1283
BbsI GAAGAC 2 cut(s) 145, 1084
Bbv12I GWGCWC 2 cut(s) 141, 530
BbvCI CCTCAGC 2 cut(s) 12, 1300
BbvI GCAGC 5 cut(s) 229, 232, 584, 1037, 1340
BccI CCATC 3 cut(s) 746, 1136, 1327
BceAI ACGGC 4 cut(s) 344, 452, 1118, 1155
BcgI CGANNNNNNTGC 2 cut(s) 1087, 1121
BciT130I CCWGG 4 cut(s) 24, 693, 1030, 1330
BcnI CCSGG 1 cut(s) 952
BcoDI GTCTC 1 cut(s) 1244
BfaI CTAG 4 cut(s) 342, 1022, 1082, 1223
BfmI CTRYAG 1 cut(s) 835
BfoI RGCGCY 3 cut(s) 360, 603, 1167
BfuAI ACCTGC 1 cut(s) 129
BglI GCCNNNNNGGC 1 cut(s) 1139
BisI GCNGC 7 cut(s) 243, 246, 573, 963, 1026, 1173, 1354
BlnI CCTAGG 2 cut(s) 1081, 1222
BlpI GCTNAGC 1 cut(s) 410
BlsI GCNGC 7 cut(s) 244, 247, 574, 964, 1027, 1174, 1355
BmcAI AGTACT 1 cut(s) 518
Bme1390I CCNGG 5 cut(s) 24, 693, 952, 1030, 1330
Bme18I GGWCC 2 cut(s) 377, 1059
BmgBI CACGTC 1 cut(s) 843
BmgT120I GGNCC 2 cut(s) 377, 1059
BmiI GGNNCC 6 cut(s) 358, 601, 766, 1061, 1070, 1267
BmrFI CCNGG 5 cut(s) 24, 693, 952, 1030, 1330
BmsI GCATC 3 cut(s) 439, 606, 1107
BoxI GACNNNNGTC 1 cut(s) 845
BpiI GAAGAC 2 cut(s) 145, 1084
BpmI CTGGAG 1 cut(s) 330
Bpu10I CCTNAGC 3 cut(s) 12, 1167, 1300
Bpu1102I GCTNAGC 1 cut(s) 410
BpuEI CTTGAG 1 cut(s) 920
BpuMI CCSGG 1 cut(s) 952
BsaBI GATNNNNATC 1 cut(s) 756
BsaHI GRCGYC 2 cut(s) 357, 600
BsaI GGTCTC 1 cut(s) 1244
BsaJI CCNNGG 3 cut(s) 873, 1081, 1222
BsaWI WCCGGW 3 cut(s) 1235, 1244, 1268
BsaXI ACNNNNNCTCC 2 cut(s) 1250, 1280
Bsc4I CCNNNNNNNGG 5 cut(s) 386, 1004, 1005, 1335, 1391
Bse118I RCCGGY 1 cut(s) 1244
Bse1I ACTGG 5 cut(s) 125, 514, 524, 1324, 1364
Bse3DI GCAATG 2 cut(s) 903, 957
Bse8I GATNNNNATC 1 cut(s) 756
BseAI TCCGGA 1 cut(s) 1268
BseBI CCWGG 4 cut(s) 24, 693, 1030, 1330
BseDI CCNNGG 3 cut(s) 873, 1081, 1222
BseGI GGATG 5 cut(s) 264, 528, 1197, 1295, 1338
BseJI GATNNNNATC 1 cut(s) 756
BseLI CCNNNNNNNGG 5 cut(s) 386, 1004, 1005, 1335, 1391
BseMI GCAATG 2 cut(s) 903, 957
BseMII CTCAG 6 cut(s) 126, 620, 1181, 1314, 1449, 1521
BseNI ACTGG 5 cut(s) 125, 514, 524, 1324, 1364
BseRI GAGGAG 1 cut(s) 1101
BseSI GKGCMC 1 cut(s) 769
BseX3I CGGCCG 1 cut(s) 1108
BseXI GCAGC 5 cut(s) 229, 232, 584, 1037, 1340
BseYI CCCAGC 2 cut(s) 452, 1408
BsgI GTGCAG 1 cut(s) 1339
Bsh1236I CGCG 1 cut(s) 1545
Bsh1285I CGRYCG 1 cut(s) 1111
BshFI GGCC 7 cut(s) 173, 738, 980, 1110, 1142, 1172, 1550
BshNI GGYRCC 3 cut(s) 356, 599, 764
BshTI ACCGGT 1 cut(s) 1244
BsiEI CGRYCG 1 cut(s) 1111
BsiHKAI GWGCWC 2 cut(s) 141, 530
BsiSI CCGG 5 cut(s) 648, 951, 1236, 1245, 1269
BslFI GGGAC 2 cut(s) 77, 242
BslI CCNNNNNNNGG 5 cut(s) 386, 1004, 1005, 1335, 1391
BsmAI GTCTC 1 cut(s) 1244
BsmFI GGGAC 2 cut(s) 77, 242
BsmI GAATGC 1 cut(s) 68
BsnI GGCC 7 cut(s) 173, 738, 980, 1110, 1142, 1172, 1550
Bso31I GGTCTC 1 cut(s) 1244
Bsp1286I GDGCHC 4 cut(s) 141, 530, 769, 957
Bsp13I TCCGGA 1 cut(s) 1268
Bsp143I GATC 8 cut(s) 207, 546, 1018, 1068, 1146, 1217, 1227, 1344
Bsp1720I GCTNAGC 1 cut(s) 410
Bsp19I CCATGG 1 cut(s) 873
BspACI CCGC 3 cut(s) 963, 1173, 1254
BspANI GGCC 7 cut(s) 173, 738, 980, 1110, 1142, 1172, 1550
BspCNI CTCAG 7 cut(s) 4, 127, 619, 1180, 1313, 1450, 1522
BspEI TCCGGA 1 cut(s) 1268
BspFNI CGCG 1 cut(s) 1545
BspHI TCATGA 1 cut(s) 477
BspLI GGNNCC 6 cut(s) 358, 601, 766, 1061, 1070, 1267
BspMI ACCTGC 1 cut(s) 129
BspPI GGATC 6 cut(s) 215, 1063, 1076, 1141, 1212, 1235
BspT107I GGYRCC 3 cut(s) 356, 599, 764
BspTNI GGTCTC 1 cut(s) 1244
BsrDI GCAATG 2 cut(s) 903, 957
BsrFI RCCGGY 1 cut(s) 1244
BsrI ACTGG 5 cut(s) 125, 514, 524, 1324, 1364
BssAI RCCGGY 1 cut(s) 1244
BssECI CCNNGG 3 cut(s) 873, 1081, 1222
BssMI GATC 8 cut(s) 207, 546, 1018, 1068, 1146, 1217, 1227, 1344
BssNI GRCGYC 2 cut(s) 357, 600
BssSI CACGAG 1 cut(s) 1283
BssT1I CCWWGG 3 cut(s) 873, 1081, 1222
Bst2BI CACGAG 1 cut(s) 1283
Bst2UI CCWGG 4 cut(s) 24, 693, 1030, 1330
Bst4CI ACNGT 2 cut(s) 424, 1389
Bst6I CTCTTC 4 cut(s) 46, 1157, 1434, 1467
BstACI GRCGYC 2 cut(s) 357, 600
BstC8I GCNNGC 3 cut(s) 1117, 1121, 1252
BstDEI CTNAG 9 cut(s) 12, 135, 410, 463, 606, 1167, 1300, 1458, 1530
BstDSI CCRYGG 1 cut(s) 873
BstF5I GGATG 5 cut(s) 264, 528, 1197, 1295, 1338
BstFNI CGCG 1 cut(s) 1545
BstH2I RGCGCY 3 cut(s) 360, 603, 1167
BstHHI GCGC 6 cut(s) 359, 416, 602, 1166, 1184, 1545
BstKTI GATC 8 cut(s) 210, 549, 1021, 1071, 1149, 1220, 1230, 1347
BstMAI GTCTC 1 cut(s) 1244
BstMBI GATC 8 cut(s) 207, 546, 1018, 1068, 1146, 1217, 1227, 1344
BstMCI CGRYCG 1 cut(s) 1111
BstMWI GCNNNNNNNGC 8 cut(s) 314, 363, 616, 1116, 1139, 1172, 1181, 1540
BstNI CCWGG 4 cut(s) 24, 693, 1030, 1330
BstNSI RCATGY 2 cut(s) 436, 1402
BstPAI GACNNNNGTC 1 cut(s) 845
BstSCI CCNGG 5 cut(s) 22, 691, 950, 1028, 1328
BstSFI CTRYAG 1 cut(s) 835
BstSLI GKGCMC 1 cut(s) 769
BstUI CGCG 1 cut(s) 1545
BstV1I GCAGC 5 cut(s) 229, 232, 584, 1037, 1340
BstV2I GAAGAC 2 cut(s) 145, 1084
BstX2I RGATCY 2 cut(s) 207, 1068
BstYI RGATCY 2 cut(s) 207, 1068
BstZI CGGCCG 1 cut(s) 1108
BsuRI GGCC 7 cut(s) 173, 738, 980, 1110, 1142, 1172, 1550
BtgI CCRYGG 1 cut(s) 873
BtgZI GCGATG 1 cut(s) 1114
BtrI CACGTC 1 cut(s) 843
BtsCI GGATG 5 cut(s) 264, 528, 1197, 1295, 1338
BtsI GCAGTG 2 cut(s) 663, 945
BtsIMutI CAGTG 6 cut(s) 429, 663, 945, 1317, 1371, 1394
BveI ACCTGC 1 cut(s) 129
Cac8I GCNNGC 3 cut(s) 1117, 1121, 1252
CaiI CAGNNNCTG 3 cut(s) 11, 452, 1319
CciI TCATGA 1 cut(s) 477
CfoI GCGC 6 cut(s) 359, 416, 602, 1166, 1184, 1545
Cfr10I RCCGGY 1 cut(s) 1244
Cfr13I GGNCC 2 cut(s) 377, 1059
Csp6I GTAC 2 cut(s) 517, 820
CspAI ACCGGT 1 cut(s) 1244
CspCI CAANNNNNGTGG 2 cut(s) 185, 220
CviQI GTAC 2 cut(s) 517, 820
DdeI CTNAG 9 cut(s) 12, 135, 410, 463, 606, 1167, 1300, 1458, 1530
DinI GGCGCC 2 cut(s) 358, 601
DpnI GATC 8 cut(s) 209, 548, 1020, 1070, 1148, 1219, 1229, 1346
DpnII GATC 8 cut(s) 207, 546, 1018, 1068, 1146, 1217, 1227, 1344
DraI TTTAAA 1 cut(s) 805
EaeI YGGCCR 5 cut(s) 171, 736, 978, 1108, 1140
EagI CGGCCG 1 cut(s) 1108
Eam1104I CTCTTC 4 cut(s) 46, 1157, 1434, 1467
EarI CTCTTC 4 cut(s) 46, 1157, 1434, 1467
EclXI CGGCCG 1 cut(s) 1108
Eco130I CCWWGG 3 cut(s) 873, 1081, 1222
Eco24I GRGCYC 1 cut(s) 957
Eco31I GGTCTC 1 cut(s) 1244
Eco47I GGWCC 2 cut(s) 377, 1059
Eco52I CGGCCG 1 cut(s) 1108
Eco57I CTGAAG 1 cut(s) 1458
EcoRII CCWGG 4 cut(s) 22, 691, 1028, 1328
EcoT14I CCWWGG 3 cut(s) 873, 1081, 1222
EcoT22I ATGCAT 1 cut(s) 39
EcoT38I GRGCYC 1 cut(s) 957
EgeI GGCGCC 2 cut(s) 358, 601
EheI GGCGCC 2 cut(s) 358, 601
ErhI CCWWGG 3 cut(s) 873, 1081, 1222
FaqI GGGAC 2 cut(s) 77, 242
FauI CCCGC 1 cut(s) 1247
FauNDI CATATG 1 cut(s) 183
Fnu4HI GCNGC 7 cut(s) 243, 246, 573, 963, 1026, 1173, 1354
FokI GGATG 5 cut(s) 251, 535, 1184, 1282, 1345
FriOI GRGCYC 1 cut(s) 957
Fsp4HI GCNGC 7 cut(s) 243, 246, 573, 963, 1026, 1173, 1354
FspBI CTAG 4 cut(s) 342, 1022, 1082, 1223
GlaI GCGC 6 cut(s) 358, 415, 601, 1165, 1183, 1544
GluI GCNGC 7 cut(s) 243, 246, 573, 963, 1026, 1173, 1354
GsaI CCCAGC 2 cut(s) 456, 1412
GsuI CTGGAG 1 cut(s) 330
HaeII RGCGCY 3 cut(s) 360, 603, 1167
HaeIII GGCC 7 cut(s) 173, 738, 980, 1110, 1142, 1172, 1550
HapII CCGG 5 cut(s) 648, 951, 1236, 1245, 1269
HhaI GCGC 6 cut(s) 359, 416, 602, 1166, 1184, 1545
Hin1I GRCGYC 2 cut(s) 357, 600
Hin6I GCGC 6 cut(s) 357, 414, 600, 1164, 1182, 1543
HinP1I GCGC 6 cut(s) 357, 414, 600, 1164, 1182, 1543
HincII GTYRAC 1 cut(s) 891
HindII GTYRAC 1 cut(s) 891
HindIII AAGCTT 1 cut(s) 938
HinfI GANTC 8 cut(s) 42, 131, 730, 757, 927, 1089, 1194, 1561
HpaII CCGG 5 cut(s) 648, 951, 1236, 1245, 1269
HphI GGTGA 4 cut(s) 75, 277, 794, 1234
Hpy166II GTNNAC 3 cut(s) 891, 1059, 1464
Hpy188I TCNGA 6 cut(s) 136, 302, 1018, 1459, 1531, 1560
Hpy188III TCNNGA 8 cut(s) 94, 157, 478, 613, 727, 1066, 1212, 1269
Hpy8I GTNNAC 3 cut(s) 891, 1059, 1464
Hpy99I CGWCG 1 cut(s) 1218
HpyAV CCTTC 7 cut(s) 202, 223, 691, 772, 866, 1315, 1590
HpyCH4III ACNGT 2 cut(s) 424, 1389
HpyCH4IV ACGT 2 cut(s) 842, 1422
HpyCH4V TGCA 8 cut(s) 37, 68, 395, 432, 908, 1098, 1356, 1492
HpyF10VI GCNNNNNNNGC 8 cut(s) 314, 363, 616, 1116, 1139, 1172, 1181, 1540
HpyF3I CTNAG 9 cut(s) 12, 135, 410, 463, 606, 1167, 1300, 1458, 1530
HpySE526I ACGT 2 cut(s) 842, 1422
Hsp92I GRCGYC 2 cut(s) 357, 600
HspAI GCGC 6 cut(s) 357, 414, 600, 1164, 1182, 1543
KasI GGCGCC 2 cut(s) 356, 599
Kpn2I TCCGGA 1 cut(s) 1268
Kzo9I GATC 8 cut(s) 207, 546, 1018, 1068, 1146, 1217, 1227, 1344
LmnI GCTCC 6 cut(s) 35, 253, 650, 1128, 1271, 1561
Lsp1109I GCAGC 5 cut(s) 229, 232, 584, 1037, 1340
LweI GCATC 3 cut(s) 439, 606, 1107
MaeI CTAG 4 cut(s) 342, 1022, 1082, 1223
MaeII ACGT 2 cut(s) 842, 1422
MaeIII GTNAC 6 cut(s) 43, 269, 458, 584, 1135, 1366
MalI GATC 8 cut(s) 209, 548, 1020, 1070, 1148, 1219, 1229, 1346
MboI GATC 8 cut(s) 207, 546, 1018, 1068, 1146, 1217, 1227, 1344
MboII GAAGA 8 cut(s) 63, 145, 208, 676, 1084, 1144, 1451, 1484
MflI RGATCY 2 cut(s) 207, 1068
MhlI GDGCHC 4 cut(s) 141, 530, 769, 957
MlsI TGGCCA 3 cut(s) 173, 738, 980
MluCI AATT 4 cut(s) 113, 675, 800, 1508
MluNI TGGCCA 3 cut(s) 173, 738, 980
Mly113I GGCGCC 2 cut(s) 357, 600
MlyI GAGTC 4 cut(s) 51, 724, 1098, 1555
MmeI TCCRAC 1 cut(s) 1583
Mox20I TGGCCA 3 cut(s) 173, 738, 980
Mph1103I ATGCAT 1 cut(s) 39
MroI TCCGGA 1 cut(s) 1268
MscI TGGCCA 3 cut(s) 173, 738, 980
MseI TTAA 1 cut(s) 804
MslI CAYNNNNRTG 1 cut(s) 1142
Msp20I TGGCCA 3 cut(s) 173, 738, 980
MspI CCGG 5 cut(s) 648, 951, 1236, 1245, 1269
MspR9I CCNGG 5 cut(s) 24, 693, 952, 1030, 1330
Mva1269I GAATGC 1 cut(s) 68
MvaI CCWGG 4 cut(s) 24, 693, 1030, 1330
MvnI CGCG 1 cut(s) 1545
MwoI GCNNNNNNNGC 8 cut(s) 314, 363, 616, 1116, 1139, 1172, 1181, 1540
NarI GGCGCC 2 cut(s) 357, 600
NciI CCSGG 1 cut(s) 952
NcoI CCATGG 1 cut(s) 873
NdeI CATATG 1 cut(s) 183
NdeII GATC 8 cut(s) 207, 546, 1018, 1068, 1146, 1217, 1227, 1344
NlaIV GGNNCC 6 cut(s) 358, 601, 766, 1061, 1070, 1267
NmeAIII GCCGAG 3 cut(s) 1086, 1136, 1540
NmuCI GTSAC 4 cut(s) 43, 269, 1135, 1366
NsiI ATGCAT 1 cut(s) 39
NspI RCATGY 2 cut(s) 436, 1402
PagI TCATGA 1 cut(s) 477
PctI GAATGC 1 cut(s) 68
PfeI GAWTC 4 cut(s) 131, 757, 927, 1194
PflMI CCANNNNNTGG 1 cut(s) 386
PfoI TCCNGGA 1 cut(s) 1328
PinAI ACCGGT 1 cut(s) 1244
PkrI GCNGC 7 cut(s) 244, 247, 574, 964, 1027, 1174, 1355
PleI GAGTC 4 cut(s) 50, 724, 1097, 1555
PluTI GGCGCC 2 cut(s) 360, 603
PpsI GAGTC 4 cut(s) 50, 724, 1097, 1555
PshAI GACNNNNGTC 1 cut(s) 845
Psp6I CCWGG 4 cut(s) 22, 691, 1028, 1328
PspFI CCCAGC 2 cut(s) 452, 1408
PspGI CCWGG 4 cut(s) 22, 691, 1028, 1328
PspN4I GGNNCC 6 cut(s) 358, 601, 766, 1061, 1070, 1267
PspPI GGNCC 2 cut(s) 377, 1059
PstNI CAGNNNCTG 3 cut(s) 11, 452, 1319
PsuI RGATCY 2 cut(s) 207, 1068
RsaI GTAC 2 cut(s) 518, 821
RsaNI GTAC 2 cut(s) 517, 820
RseI CAYNNNNRTG 1 cut(s) 1142
SaqAI TTAA 1 cut(s) 804
SatI GCNGC 7 cut(s) 243, 246, 573, 963, 1026, 1173, 1354
Sau3AI GATC 8 cut(s) 207, 546, 1018, 1068, 1146, 1217, 1227, 1344
Sau96I GGNCC 2 cut(s) 377, 1059
ScaI AGTACT 1 cut(s) 518
SchI GAGTC 4 cut(s) 51, 724, 1098, 1555
ScrFI CCNGG 5 cut(s) 24, 693, 952, 1030, 1330
SduI GDGCHC 4 cut(s) 141, 530, 769, 957
SfaNI GCATC 3 cut(s) 439, 606, 1107
SfcI CTRYAG 1 cut(s) 835
SfoI GGCGCC 2 cut(s) 358, 601
SgrAI CRCCGGYG 1 cut(s) 1244
SinI GGWCC 2 cut(s) 377, 1059
SmiMI CAYNNNNRTG 1 cut(s) 1142
SmlI CTYRAG 1 cut(s) 935
SmoI CTYRAG 1 cut(s) 935
Sse9I AATT 4 cut(s) 113, 675, 800, 1508
SsiI CCGC 3 cut(s) 963, 1173, 1254
SspDI GGCGCC 2 cut(s) 356, 599
SspI AATATT 1 cut(s) 914
SspMI CTAG 4 cut(s) 342, 1022, 1082, 1223
StyD4I CCNGG 5 cut(s) 22, 691, 950, 1028, 1328
StyI CCWWGG 3 cut(s) 873, 1081, 1222
TaaI ACNGT 2 cut(s) 424, 1389
TaiI ACGT 2 cut(s) 845, 1425
TaqI TCGA 2 cut(s) 233, 994
TasI AATT 4 cut(s) 113, 675, 800, 1508
TatI WGTACW 1 cut(s) 516
TauI GCSGC 2 cut(s) 965, 1175
TfiI GAWTC 4 cut(s) 131, 757, 927, 1194
Tru1I TTAA 1 cut(s) 804
Tru9I TTAA 1 cut(s) 804
TscAI CASTG 6 cut(s) 429, 670, 952, 1324, 1371, 1394
TseFI GTSAC 4 cut(s) 43, 269, 1135, 1366
TseI GCWGC 5 cut(s) 242, 245, 572, 1025, 1353
Tsp45I GTSAC 4 cut(s) 43, 269, 1135, 1366
TspDTI ATGAA 7 cut(s) 466, 676, 692, 813, 976, 1195, 1367
TspGWI ACGGA 2 cut(s) 257, 1147
TspRI CASTG 6 cut(s) 429, 670, 952, 1324, 1371, 1394
Van91I CCANNNNNTGG 1 cut(s) 386
VpaK11BI GGWCC 2 cut(s) 377, 1059
XapI RAATTY 3 cut(s) 113, 800, 1508
XceI RCATGY 2 cut(s) 436, 1402
XcmI CCANNNNNNNNNTGG 1 cut(s) 973
XmaJI CCTAGG 2 cut(s) 1081, 1222
XspI CTAG 4 cut(s) 342, 1022, 1082, 1223
ZrmI AGTACT 1 cut(s) 518
Zsp2I ATGCAT 1 cut(s) 39
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.