Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000589

Physical Location & Seq

Genomic Coordinates Reverse (-)

8021229 .. 8024594

Gene Structure 3366 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G22690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2817 bp

ATGGCGATGTTGGGTAATGTTCTTCATCTCTCTCCAATGGTGTTAGCCACCACGACGACTACGAAACCATCTCTTCTAAACCAGAGCAAGTGTACCAAAGCCACGCCATCGTCGTTAAAGAATTGCAAAACCATAGACGAACTCAAAATGTTTCATCGTTCGCTCACGAAGCAAGGACTTGATAATGATGTCTCCACTATAACTAAGCTTGTAGCACGGAGTTGTGAATTGGGTACTCGTGAAAGTTTGAGCTTTGCTAAAGAAGTGTTTGAGAACAGTGAATCGTATGGAACTTGTTTCATGTACAATTCTTTGATTCGAGGATATGCATCTTCTGGGTTATGCAACGAAGCTATATTGTTATTTCTTCGAATGATGAATTCTGGGATTTCTCCAGATAAGTACACGTTTCCTTTTGGATTGAGTGCGTGTGCGAAAAGCAGAGCGAAAGGTAATGGGATTCAGATTCATGGGTTGATTGTGAAGATGGGTTATGCGAAAGATTTGTTTGTGCAGAACTCGCTGGTTCATTTTTACGCCGAGTGTGGAGAGCTTGATAGTGCACGTAAGGTGTTTGATGAAATGTCTGAGAGAAATGTTGTTTCTTGGACGAGTATGATTTGTGGTTACGCGAGGCGGGATTTTGCTAAAGACGCTGTTGATTTGTTTTTTCGGATGGTGAGAGATGAAGAGGTGACTCCTAATTCGGTTACAATGGTGTGTGTGATATCGGCTTGTGCTAAGCTAGAGGATCTTGAGACGGGCGAGAAGGTTTATGCTTTTATCCGTAATTCTGGTATTGAAGTTAATGATCTTATGGTTAGTGCACTGGTTGATATGTACATGAAATGCAATGCCATTGATGTAGCAAAACGGCTTTTTGATGAATATGGTGCTAGTAATTTGGATTTGTGCAATGCAATGGCATCAAATTATGTACGGCAAGGGTTAACGAGGGAGGCTTTAGGTGTTTTTAATCTGATGATGGACTCTGGTGTTAGACCTGATAGGATTTCGATGTTGAGTGCGATTTCATCTTGTTCACAATTGAGAAATATCTTGTGGGGAAAGAGCTGTCATGGGTATGTATTGAGGAATGGGTTTGAGAGTTGGGATAATATATGCAATGCGTTGATTGATATGTACATGAAATGTCATAGGCAAGATACTGCGTTTAGGATCTTTGATCGGATGTCGAACAAGACAGTGGTGACGTGGAACTCGATTGTTGCTGGCTATGTAGAGAATGGTGAGGTGGATGCAGCCTGGGAAACATTTGAAACCATGCCTGAGAAAAACATTGTTTCTTGGAATACGATTATCAGCGGTCTGGTGCAAGGAAGTTTGTTTGAGGAAGCGATTGAAGTTTTCTGTTCTATGCAAAGCCAAGAGGGTGTCAATGCGGATGGTGTGACAATGATGAGTATTGCATCTGCTTGTGGGCACTTGGGAGCTCTTGATCTAGCTAAATGGATATATTACTACATTGAGAAGAACGGAATTCAGCTTGATGTCAGACTTGGTACAACCTTAGTAGATATGTTTTCTAGGTGTGGGGATCCTGAAAGTGCTATGTCAATTTTTAATAGTTTGACAAACAGAGATGTCTCAGCTTGGACAGCGGCTATAGGAGCAATGGCTATGGCAGGAAACGCTGAGCGAGCAATTGAGCTTTTCGATGATATGATTGAACAAGGGTTGAAACCAGATGGGGTTGCGTTTGTTGGAGCACTGACAGCTTGCAGCCATGGTGGATTGGTCCAACAGGGTAAGGAAATTTTCTATTCGATGTTGAAACTTCATGGAGTTTCTCCAGAAGATGTGCACTATGGATGTATGGTTGATCTGCTTGGTCGAGCAGGATTGTTAGAGGAAGCTGTGCAACTCATTGAGGACATGCCTATGGAGCCAAACGATGTGATTTGGAACTCTCTTTTAGCTGCTTGTCGTGTTCAGGGAAATGTGGAGATGGCAGCTTATGCAGCCGAGAAGATACAAGTCTTGGCTCCAGAGAGAACTGGGAGTTATGTTCTTCTGTCAAATGTTTATGCATCAGCTGGAAGATGGAACGACATGGCGAAAGTGAGACTGAGTATGAAGGAGAAAGGGTTACGTAAACCGCCAGGGACTAGTTCAATACAGATTCGAGGTAAAACCCATGAGTTCACATCAGGGGACGAGTCACACCCTGAAATGCCAAACATAGAAGCAATGCTAGATGAAGTTAGTCAAAGAGCGAGTCACTTAGGCCATGTACCTGATCTTAGTAATGTTCTTATGGATGTTGATGAGAAAGAGAAGATCTTTATGCTTAGCAGACACAGCGAGAAACTTGCAATGGCCTATGGACTCATTAGCTCAAACAAAGGCACAACAATCCGAATAGTCAAGAACCTAAGAGTATGCTCTGATTGTCATTCATTTGCAAAATTTGCATCCAAAGTATACAACAGAGAAATCATTCTAAGAGACAATAACCGGTTTCATTACATCCGTCAAGGGAAGTGTTCTTGCGGTGACTTCTGTTTGACGGATGACGATCTCGAAGTTCTCAAAGGTTGTTTAGATCTAGGCTTTGGTTTCAACTACGACGAGATCCCTGCGCTCTGCAAGACTTTACCTGCTTTAGAGCTTTGCTATTCAATGAGCCAAAAAAATTTAGACGATAAGCATACACCATCACTCCAATTGCCAATTGGAAGATCTCTAGTCCCGTCGTGTGATAATCCGGATGATGTGAAAGCTAGACTCAAATGCTGGGCACAAGCCCGGAGGAGGAGATTTCAGAAAGGCATTGGAAGGTCTGAATTTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

938

Amino Acids

104.22

Weight (kDa)

5.81

Isoelectric Point (pI)

47.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	100 - 146	4.1e-08	PPR repeat family
PPR	PF01535	100 - 130	9.8e-07	PPR repeat
PPR_2	PF13041	198 - 248	1.1e-07	PPR repeat family
PPR_2	PF13041	402 - 434	3e-07	PPR repeat family
PPR_2	PF13041	432 - 480	1.9e-06	PPR repeat family
PPR_2	PF13041	534 - 581	1.9e-06	PPR repeat family
E_motif	PF20431	654 - 714	5.9e-19	E motif
Eplus_motif	PF20430	719 - 745	4.3e-07	E+ motif
DYW_deaminase	PF14432	750 - 841	5.9e-39	DYW family of nucleic acid deaminases
DUF1685	PF07939	843 - 892	3.2e-21	Protein of unknown function (DUF1685)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0000589)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22690 AT3G22690 AT3G22690
fragaria_vesca	FvH4_4g12100 FvH4_4g12100 FvH4_4g12100
malus_domestica	MD07G1198500.v1.1 MD12G1181700.v1.1
prunus_persica	Prupe.1G018800_v2.0.a1
pyrus_communis	pycom07g16490
rosa_chinensis	RchiOBHm_Chr1g0328851 RchiOBHm_Chr1g0329061 RchiOBHm_Chr1g0329101 RchiOBHm_Chr1g0329141 RchiOBHm_Chr2g0124781 RchiOBHm_Chr3g0482411 RchiOBHm_Chr3g0482461 RchiOBHm_Chr4g0386511 RchiOBHm_Chr4g0386531 RchiOBHm_Chr4g0386651 RchiOBHm_Chr4g0386671 RchiOBHm_Chr4g0386751 RchiOBHm_Chr4g0386781 RchiOBHm_Chr4g0386861 RchiOBHm_Chr4g0386891 RchiOBHm_Chr4g0386911 RchiOBHm_Chr4g0386991 RchiOBHm_Chr4g0387041 RchiOBHm_Chr4g0387171 RchiOBHm_Chr4g0387241 RchiOBHm_Chr4g0387301 RchiOBHm_Chr4g0387341 RchiOBHm_Chr4g0387441 RchiOBHm_Chr4g0388061 RchiOBHm_Chr4g0389241 RchiOBHm_Chr4g0389361
rosa_laevigata	RLG00000010137 RLG00000010138 RLG00000010145 RLG00000010146 RLG00000018820 RLG00000023352 RLG00000029915
rosa_multiflora	Rmu_co8009444.1_g000001 Rmu_co8455349.1_g000001 Rmu_sc0001375.1_g000001 Rmu_sc0001942.1_g000049 Rmu_sc0001942.1_g000077 Rmu_sc0002939.1_g000001 Rmu_sc0003413.1_g000068 Rmu_sc0003413.1_g000075 Rmu_sc0006571.1_g000008 Rmu_sc0006571.1_g000013 Rmu_sc0006571.1_g000016 Rmu_sc0006648.1_g000004 Rmu_sc0008380.1_g000005 Rmu_sc0009161.1_g000006 Rmu_sc0009161.1_g000007 Rmu_sc0010272.1_g000019 Rmu_sc0011657.1_g000016 Rmu_sc0028698.1_g000001
rosa_roxburghii	Rroxscaffold_2G00119680 Rroxscaffold_2G00119690 Rroxscaffold_5G00334120
rosa_rugosa	Rorug02G0252500 Rorug02G0252500 Rorug03G0196200 Rorug03G0307500 Rorug03G0307800 Rorug03G0308200 Rorug03G0308400 Rorug03G0365200.1 Rorug07G0142900
rosa_samantha	Rh2AG312000 Rh2BG320300 Rh2CG300300 Rh4DG011500 Rh4DG020300
rosa_wichuraiana	Rw2G025200 Rw3G022270 Rw4G001010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2629
AccI	GTMKAC	1 cut(s)	2445
AccII	CGCG	1 cut(s)	632
AccIII	TCCGGA	1 cut(s)	2728
AciI	CCGC	6 cut(s)	637, 1326, 1403, 1622, 2120, 2514
AclWI	GGATC	5 cut(s)	759, 1187, 1553, 1566, 2590
AcsI	RAATTY	6 cut(s)	379, 1500, 1776, 2429, 2656, 2807
AfaI	GTAC	9 cut(s)	94, 235, 305, 404, 842, 939, 1145, 1525, 2256
AfiI	CCNNNNNNNGG	1 cut(s)	2775
AflIII	ACRYGT	1 cut(s)	405
AgeI	ACCGGT	1 cut(s)	2478
AgsI	TTSAA	9 cut(s)	803, 1280, 1364, 1691, 1702, 1795, 2136, 2584, 2643
AhlI	ACTAGT	1 cut(s)	2129
AjiI	CACGTC	1 cut(s)	1215
AjnI	CCWGG	2 cut(s)	1265, 2122
Alw21I	GWGCWC	5 cut(s)	565, 829, 1456, 1732, 1827
Alw26I	GTCTC	5 cut(s)	196, 752, 1612, 2080, 2463
Alw44I	GTGCAC	3 cut(s)	561, 825, 1823
AlwI	GGATC	5 cut(s)	759, 1187, 1553, 1566, 2590
Aor13HI	TCCGGA	1 cut(s)	2728
AoxI	GGCC	2 cut(s)	2248, 2340
ApaLI	GTGCAC	3 cut(s)	561, 825, 1823
ApeKI	GCWGC	5 cut(s)	1262, 1743, 1940, 1973, 1982
ApoI	RAATTY	6 cut(s)	379, 1500, 1776, 2429, 2656, 2807
ArsI	GACNNNNNNTTYG	4 cut(s)	688, 720, 2224, 2256
AsiGI	ACCGGT	1 cut(s)	2478
Asp700I	GAANNNNTTC	1 cut(s)	2460
AspLEI	GCGC	1 cut(s)	2605
AspS9I	GGNCC	1 cut(s)	1759
AsuC2I	CCSGG	1 cut(s)	2770
AsuHPI	GGTGA	5 cut(s)	691, 706, 1222, 1262, 2528
AsuII	TTCGAA	1 cut(s)	370
AvaII	GGWCC	1 cut(s)	1759
BaeGI	GKGCMC	5 cut(s)	565, 829, 1446, 1827, 2764
BamHI	GGATCC	1 cut(s)	1558
BanII	GRGCYC	1 cut(s)	1456
BauI	CACGAG	1 cut(s)	237
Bbv12I	GWGCWC	5 cut(s)	565, 829, 1456, 1732, 1827
BbvI	GCAGC	5 cut(s)	1274, 1755, 1927, 1985, 1994
BceAI	ACGGC	2 cut(s)	890, 956
BcgI	CGANNNNNNTGC	4 cut(s)	2315, 2349, 2582, 2616
BciT130I	CCWGG	2 cut(s)	1267, 2124
BcnI	CCSGG	1 cut(s)	2770
BcoDI	GTCTC	5 cut(s)	196, 752, 1612, 2080, 2463
BcuI	ACTAGT	1 cut(s)	2129
BfaI	CTAG	9 cut(s)	746, 897, 1463, 1548, 2130, 2216, 2570, 2708, 2745
BfmI	CTRYAG	1 cut(s)	1626
BfuAI	ACCTGC	1 cut(s)	2629
BglII	AGATCT	3 cut(s)	2301, 2566, 2702
BisI	GCNGC	6 cut(s)	1263, 1623, 1744, 1941, 1974, 1983
BlpI	GCTNAGC	3 cut(s)	741, 1656, 2312
BlsI	GCNGC	6 cut(s)	1264, 1624, 1745, 1942, 1975, 1984
Bme1390I	CCNGG	3 cut(s)	1267, 2124, 2770
Bme18I	GGWCC	1 cut(s)	1759
BmgBI	CACGTC	1 cut(s)	1215
BmgT120I	GGNCC	1 cut(s)	1759
BmiI	GGNNCC	3 cut(s)	1560, 1908, 2007
BmrFI	CCNGG	3 cut(s)	1267, 2124, 2770
BmrI	ACTGGG	1 cut(s)	2028
BmsI	GCATC	6 cut(s)	338, 935, 1249, 1439, 2060, 2444
BmuI	ACTGGG	1 cut(s)	2028
BpmI	CTGGAG	3 cut(s)	378, 1797, 1992
Bpu1102I	GCTNAGC	3 cut(s)	741, 1656, 2312
Bpu14I	TTCGAA	1 cut(s)	370
BpuEI	CTTGAG	1 cut(s)	776
BpuMI	CCSGG	1 cut(s)	2770
BsaAI	YACGTR	2 cut(s)	566, 2114
BsaBI	GATNNNNATC	2 cut(s)	328, 2538
BsaJI	CCNNGG	3 cut(s)	1266, 1747, 2123
BsaWI	WCCGGW	2 cut(s)	2478, 2728
BsaXI	ACNNNNNCTCC	4 cut(s)	2093, 2123, 2667, 2697
Bsc4I	CCNNNNNNNGG	1 cut(s)	2775
Bse118I	RCCGGY	1 cut(s)	2478
Bse1I	ACTGG	2 cut(s)	834, 2023
Bse3DI	GCAATG	7 cut(s)	859, 922, 927, 1132, 1641, 2217, 2343
Bse8I	GATNNNNATC	2 cut(s)	328, 2538
BseAI	TCCGGA	1 cut(s)	2728
BseBI	CCWGG	2 cut(s)	1267, 2124
BseDI	CCNNGG	3 cut(s)	1266, 1747, 2123
BseJI	GATNNNNATC	2 cut(s)	328, 2538
BseLI	CCNNNNNNNGG	1 cut(s)	2775
BseMI	GCAATG	7 cut(s)	859, 922, 927, 1132, 1641, 2217, 2343
BseMII	CTCAG	5 cut(s)	579, 1281, 1623, 1647, 2081
BseNI	ACTGG	2 cut(s)	834, 2023
BseRI	GAGGAG	2 cut(s)	2788, 2791
BseSI	GKGCMC	5 cut(s)	565, 829, 1446, 1827, 2764
BseXI	GCAGC	5 cut(s)	1274, 1755, 1927, 1985, 1994
BseYI	CCCAGC	1 cut(s)	2757
BsgI	GTGCAG	1 cut(s)	533
Bsh1236I	CGCG	1 cut(s)	632
BshFI	GGCC	2 cut(s)	2250, 2342
BshTI	ACCGGT	1 cut(s)	2478
BsiHKAI	GWGCWC	5 cut(s)	565, 829, 1456, 1732, 1827
BsiSI	CCGG	3 cut(s)	2479, 2729, 2770
BslFI	GGGAC	3 cut(s)	2140, 2189, 2696
BslI	CCNNNNNNNGG	1 cut(s)	2775
BsmAI	GTCTC	5 cut(s)	196, 752, 1612, 2080, 2463
BsmBI	CGTCTC	1 cut(s)	752
BsmFI	GGGAC	3 cut(s)	2140, 2189, 2696
BsnI	GGCC	2 cut(s)	2250, 2342
Bsp119I	TTCGAA	1 cut(s)	370
Bsp1286I	GDGCHC	7 cut(s)	565, 829, 1446, 1456, 1732, 1827, 2764
Bsp13I	TCCGGA	1 cut(s)	2728
Bsp1407I	TGTACA	3 cut(s)	303, 840, 1143
Bsp1720I	GCTNAGC	3 cut(s)	741, 1656, 2312
Bsp19I	CCATGG	1 cut(s)	1747
BspACI	CCGC	6 cut(s)	637, 1326, 1403, 1622, 2120, 2514
BspANI	GGCC	2 cut(s)	2250, 2342
BspCNI	CTCAG	5 cut(s)	580, 1282, 1622, 1648, 2082
BspEI	TCCGGA	1 cut(s)	2728
BspFNI	CGCG	1 cut(s)	632
BspLI	GGNNCC	3 cut(s)	1560, 1908, 2007
BspMI	ACCTGC	1 cut(s)	2629
BspPI	GGATC	5 cut(s)	759, 1187, 1553, 1566, 2590
BspT104I	TTCGAA	1 cut(s)	370
BsrDI	GCAATG	7 cut(s)	859, 922, 927, 1132, 1641, 2217, 2343
BsrFI	RCCGGY	1 cut(s)	2478
BsrGI	TGTACA	3 cut(s)	303, 840, 1143
BsrI	ACTGG	2 cut(s)	834, 2023
BssAI	RCCGGY	1 cut(s)	2478
BssECI	CCNNGG	3 cut(s)	1266, 1747, 2123
BssNAI	GTATAC	1 cut(s)	2446
BssSI	CACGAG	1 cut(s)	237
BssT1I	CCWWGG	1 cut(s)	1747
Bst1107I	GTATAC	1 cut(s)	2446
Bst2BI	CACGAG	1 cut(s)	237
Bst2UI	CCWGG	2 cut(s)	1267, 2124
Bst4CI	ACNGT	2 cut(s)	278, 1207
Bst6I	CTCTTC	2 cut(s)	78, 684
BstAPI	GCANNNNNTGC	2 cut(s)	1979, 2432
BstAUI	TGTACA	3 cut(s)	303, 840, 1143
BstBAI	YACGTR	2 cut(s)	566, 2114
BstBI	TTCGAA	1 cut(s)	370
BstC8I	GCNNGC	3 cut(s)	1234, 1662, 1741
BstDSI	CCRYGG	1 cut(s)	1747
BstFNI	CGCG	1 cut(s)	632
BstHHI	GCGC	1 cut(s)	2605
BstMAI	GTCTC	5 cut(s)	196, 752, 1612, 2080, 2463
BstNI	CCWGG	2 cut(s)	1267, 2124
BstNSI	RCATGY	1 cut(s)	1900
BstSCI	CCNGG	3 cut(s)	1265, 2122, 2768
BstSFI	CTRYAG	1 cut(s)	1626
BstSLI	GKGCMC	5 cut(s)	565, 829, 1446, 1827, 2764
BstSNI	TACGTA	1 cut(s)	2114
BstUI	CGCG	1 cut(s)	632
BstV1I	GCAGC	5 cut(s)	1274, 1755, 1927, 1985, 1994
BstX2I	RGATCY	7 cut(s)	751, 1179, 1558, 2301, 2566, 2595, 2702
BstYI	RGATCY	7 cut(s)	751, 1179, 1558, 2301, 2566, 2595, 2702
BstZ17I	GTATAC	1 cut(s)	2446
BsuRI	GGCC	2 cut(s)	2250, 2342
BtgI	CCRYGG	1 cut(s)	1747
BtgZI	GCGATG	1 cut(s)	20
BtrI	CACGTC	1 cut(s)	1215
BtsIMutI	CAGTG	4 cut(s)	283, 827, 1212, 1730
BveI	ACCTGC	1 cut(s)	2629
Cac8I	GCNNGC	3 cut(s)	1234, 1662, 1741
CfoI	GCGC	1 cut(s)	2605
Cfr10I	RCCGGY	1 cut(s)	2478
Cfr13I	GGNCC	1 cut(s)	1759
CseI	GACGC	1 cut(s)	662
Csp6I	GTAC	9 cut(s)	93, 234, 304, 403, 841, 938, 1144, 1524, 2255
CspAI	ACCGGT	1 cut(s)	2478
CviQI	GTAC	9 cut(s)	93, 234, 304, 403, 841, 938, 1144, 1524, 2255
Eam1104I	CTCTTC	2 cut(s)	78, 684
EarI	CTCTTC	2 cut(s)	78, 684
Ecl136II	GAGCTC	1 cut(s)	1454
Eco105I	TACGTA	1 cut(s)	2114
Eco130I	CCWWGG	1 cut(s)	1747
Eco24I	GRGCYC	1 cut(s)	1456
Eco32I	GATATC	1 cut(s)	729
Eco47I	GGWCC	1 cut(s)	1759
Eco53kI	GAGCTC	1 cut(s)	1454
EcoICRI	GAGCTC	1 cut(s)	1454
EcoRI	GAATTC	2 cut(s)	379, 1500
EcoRII	CCWGG	2 cut(s)	1265, 2122
EcoRV	GATATC	1 cut(s)	729
EcoT14I	CCWWGG	1 cut(s)	1747
EcoT22I	ATGCAT	2 cut(s)	331, 2053
EcoT38I	GRGCYC	1 cut(s)	1456
ErhI	CCWWGG	1 cut(s)	1747
Esp3I	CGTCTC	1 cut(s)	752
FaqI	GGGAC	3 cut(s)	2140, 2189, 2696
FauI	CCCGC	1 cut(s)	630
FblI	GTMKAC	1 cut(s)	2445
Fnu4HI	GCNGC	6 cut(s)	1263, 1623, 1744, 1941, 1974, 1983
FriOI	GRGCYC	1 cut(s)	1456
Fsp4HI	GCNGC	6 cut(s)	1263, 1623, 1744, 1941, 1974, 1983
FspBI	CTAG	9 cut(s)	746, 897, 1463, 1548, 2130, 2216, 2570, 2708, 2745
GlaI	GCGC	1 cut(s)	2604
GluI	GCNGC	6 cut(s)	1263, 1623, 1744, 1941, 1974, 1983
GsaI	CCCAGC	1 cut(s)	2761
GsuI	CTGGAG	3 cut(s)	378, 1797, 1992
HaeIII	GGCC	2 cut(s)	2250, 2342
HapII	CCGG	3 cut(s)	2479, 2729, 2770
HgaI	GACGC	1 cut(s)	662
HhaI	GCGC	1 cut(s)	2605
Hin6I	GCGC	1 cut(s)	2603
HinP1I	GCGC	1 cut(s)	2603
HincII	GTYRAC	1 cut(s)	951
HindII	GTYRAC	1 cut(s)	951
HindIII	AAGCTT	1 cut(s)	206
HpaI	GTTAAC	1 cut(s)	951
HpaII	CCGG	3 cut(s)	2479, 2729, 2770
HphI	GGTGA	5 cut(s)	691, 706, 1222, 1262, 2528
Hpy99I	CGWCG	4 cut(s)	58, 115, 2594, 2719
HpyAV	CCTTC	3 cut(s)	763, 2092, 2793
HpyCH4III	ACNGT	2 cut(s)	278, 1207
HpyCH4IV	ACGT	4 cut(s)	407, 565, 1214, 2113
HpySE526I	ACGT	4 cut(s)	407, 565, 1214, 2113
HspAI	GCGC	1 cut(s)	2603
Kpn2I	TCCGGA	1 cut(s)	2728
KspAI	GTTAAC	1 cut(s)	951
LmnI	GCTCC	5 cut(s)	1451, 1631, 1727, 1906, 2011
Lsp1109I	GCAGC	5 cut(s)	1274, 1755, 1927, 1985, 1994
LweI	GCATC	6 cut(s)	338, 935, 1249, 1439, 2060, 2444
MaeI	CTAG	9 cut(s)	746, 897, 1463, 1548, 2130, 2216, 2570, 2708, 2745
MaeII	ACGT	4 cut(s)	407, 565, 1214, 2113
MaeIII	GTNAC	9 cut(s)	626, 694, 709, 1210, 1411, 2109, 2181, 2240, 2516
MfeI	CAATTG	4 cut(s)	1046, 1665, 2687, 2694
MflI	RGATCY	7 cut(s)	751, 1179, 1558, 2301, 2566, 2595, 2702
MhlI	GDGCHC	7 cut(s)	565, 829, 1446, 1456, 1732, 1827, 2764
MlyI	GAGTC	6 cut(s)	691, 983, 2189, 2248, 2343, 2742
MmeI	TCCRAC	2 cut(s)	1705, 1786
Mph1103I	ATGCAT	2 cut(s)	331, 2053
MroI	TCCGGA	1 cut(s)	2728
MroXI	GAANNNNTTC	1 cut(s)	2460
MseI	TTAA	6 cut(s)	116, 807, 950, 975, 1584, 2811
MslI	CAYNNNNRTG	2 cut(s)	1083, 1901
MspA1I	CMGCKG	3 cut(s)	1326, 1622, 2057
MspI	CCGG	3 cut(s)	2479, 2729, 2770
MspR9I	CCNGG	3 cut(s)	1267, 2124, 2770
MunI	CAATTG	4 cut(s)	1046, 1665, 2687, 2694
MvaI	CCWGG	2 cut(s)	1267, 2124
MvnI	CGCG	1 cut(s)	632
NciI	CCSGG	1 cut(s)	2770
NcoI	CCATGG	1 cut(s)	1747
NlaIV	GGNNCC	3 cut(s)	1560, 1908, 2007
NmeAIII	GCCGAG	2 cut(s)	565, 2011
NmuCI	GTSAC	6 cut(s)	694, 1210, 1411, 2181, 2240, 2516
NsiI	ATGCAT	2 cut(s)	331, 2053
NspI	RCATGY	1 cut(s)	1900
NspV	TTCGAA	1 cut(s)	370
PcsI	WCGNNNNNNNCGW	3 cut(s)	59, 110, 1220
PdmI	GAANNNNTTC	1 cut(s)	2460
PfeI	GAWTC	5 cut(s)	281, 316, 460, 466, 2143
PinAI	ACCGGT	1 cut(s)	2478
PkrI	GCNGC	6 cut(s)	1264, 1624, 1745, 1942, 1975, 1984
PleI	GAGTC	6 cut(s)	691, 983, 2188, 2247, 2343, 2742
PpsI	GAGTC	6 cut(s)	691, 983, 2188, 2247, 2343, 2742
Ppu21I	YACGTR	2 cut(s)	566, 2114
Psp124BI	GAGCTC	1 cut(s)	1456
Psp6I	CCWGG	2 cut(s)	1265, 2122
PspFI	CCCAGC	1 cut(s)	2757
PspGI	CCWGG	2 cut(s)	1265, 2122
PspN4I	GGNNCC	3 cut(s)	1560, 1908, 2007
PspPI	GGNCC	1 cut(s)	1759
PsuI	RGATCY	7 cut(s)	751, 1179, 1558, 2301, 2566, 2595, 2702
PvuII	CAGCTG	1 cut(s)	2057
RsaI	GTAC	9 cut(s)	94, 235, 305, 404, 842, 939, 1145, 1525, 2256
RsaNI	GTAC	9 cut(s)	93, 234, 304, 403, 841, 938, 1144, 1524, 2255
RseI	CAYNNNNRTG	2 cut(s)	1083, 1901
SacI	GAGCTC	1 cut(s)	1456
SaqAI	TTAA	6 cut(s)	116, 807, 950, 975, 1584, 2811
SatI	GCNGC	6 cut(s)	1263, 1623, 1744, 1941, 1974, 1983
Sau96I	GGNCC	1 cut(s)	1759
SchI	GAGTC	6 cut(s)	691, 983, 2189, 2248, 2343, 2742
ScrFI	CCNGG	3 cut(s)	1267, 2124, 2770
SduI	GDGCHC	7 cut(s)	565, 829, 1446, 1456, 1732, 1827, 2764
SfaNI	GCATC	6 cut(s)	338, 935, 1249, 1439, 2060, 2444
SfcI	CTRYAG	1 cut(s)	1626
SfuI	TTCGAA	1 cut(s)	370
SinI	GGWCC	1 cut(s)	1759
SmiMI	CAYNNNNRTG	2 cut(s)	1083, 1901
SmlI	CTYRAG	1 cut(s)	755
SmoI	CTYRAG	1 cut(s)	755
SnaBI	TACGTA	1 cut(s)	2114
SpeI	ACTAGT	1 cut(s)	2129
SsiI	CCGC	6 cut(s)	637, 1326, 1403, 1622, 2120, 2514
SspMI	CTAG	9 cut(s)	746, 897, 1463, 1548, 2130, 2216, 2570, 2708, 2745
SstI	GAGCTC	1 cut(s)	1456
StyD4I	CCNGG	3 cut(s)	1265, 2122, 2768
StyI	CCWWGG	1 cut(s)	1747
TaaI	ACNGT	2 cut(s)	278, 1207
TaiI	ACGT	4 cut(s)	410, 568, 1217, 2116
TatI	WGTACW	4 cut(s)	303, 402, 840, 1143
TauI	GCSGC	1 cut(s)	1625
TfiI	GAWTC	5 cut(s)	281, 316, 460, 466, 2143
Tru1I	TTAA	6 cut(s)	116, 807, 950, 975, 1584, 2811
Tru9I	TTAA	6 cut(s)	116, 807, 950, 975, 1584, 2811
TscAI	CASTG	4 cut(s)	283, 834, 1212, 1737
TseFI	GTSAC	6 cut(s)	694, 1210, 1411, 2181, 2240, 2516
TseI	GCWGC	5 cut(s)	1262, 1743, 1940, 1973, 1982
Tsp45I	GTSAC	6 cut(s)	694, 1210, 1411, 2181, 2240, 2516
TspGWI	ACGGA	5 cut(s)	232, 776, 1512, 2483, 2546
TspRI	CASTG	4 cut(s)	283, 834, 1212, 1737
VneI	GTGCAC	3 cut(s)	561, 825, 1823
VpaK11BI	GGWCC	1 cut(s)	1759
XapI	RAATTY	6 cut(s)	379, 1500, 1776, 2429, 2656, 2807
XceI	RCATGY	1 cut(s)	1900
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2693
XmiI	GTMKAC	1 cut(s)	2445
XmnI	GAANNNNTTC	1 cut(s)	2460
XspI	CTAG	9 cut(s)	746, 897, 1463, 1548, 2130, 2216, 2570, 2708, 2745
Zsp2I	ATGCAT	2 cut(s)	331, 2053

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.