Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0000589

Physical Location & Seq

Genomic Coordinates Reverse (-)

11269551 .. 11271435

Gene Structure 1885 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0142900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1404 bp

ATGAAACCACCCCATGTCGCCATTGTCCCAAGTCCAGGTATAGGTCATCTCATTCCCCTCGTTGAGCTAGCCAAACGACTTGTCGTCCACCACCACTTCAGCGTCACCTTCTTCATCCCCAGCGACGACGGATCAAACTTGACACCCCACAGGAAAGTTCTAGATGTCTTGCCCCAATCCATATCCTCCACCTTTCTCCCTCCTGCAAACTTTGACGACCTCCCTAAGGACATTAAGCACTTAACCAGAATCGCTCTCACCATGACTCGGTCCCTCCCTGCTCTTCGTGACTCGATCAAGGCCCTAGCCGAGTCGACTCGTCTGGTTGCCCTAGTGGTTGATCTTTTTGGCGGGGATGCTTTTGATGTGGCTAAGGAATTCGATATACTTCCCTACATTTTGTACCCTACAAATGCTATGGTATTGTGGTTTCAGTTTGAATTGCCAAAGCTCGACCAGACCATTTCTTGTGAGTACAGGGATTTGCCTGAACCGGTCAAACTCCCGGGATGTGTGCCGATCTACGGTAAAAATTTGTTAGACTCGGTTCAAGATAGGACCAACCAAGCCTACAAAGTGCTTATTGACGTTTCTAAGAGGTACAAGTCGGCTGCTGGGATCATGATCAATAGCTTTGTGGATTTGCAACTGGGTGCTTTCAAGGCTTTCAAAGAACAAGGACAAGGTCTTGGTCTTCCACCAATTTACCCGGTCGGACCGATAACAGAGACTGGTTCGACCAATGAGAATGCTTGTTTGAGCTGGTTAGATATGCAGCCTAATGGATCAGTGTTATTTATTTCATTTGGGAGTGGTGGCACCATCTCAAGTGAGCAAATGAATGAGTTGGCACTAGGGCTTGAAAAGAGCAGGGTGAGATTTATTTGGAATTTCAAGTGCCCAAATGAGACATCAAAAAATGCAGCTTACTTTGGTGTTCAAAGTTCGACCGAACCCTTAAGTTTTCTACCCCAAGGGTTTTTGGAGAGAACGAAAGACGTAGGGTTAGTGGTTACTTCTTGGGCTCCTCAGGTTCCAATTTTGAGTCATGGATCAACCGGCGGGTTTTTGACCCATTGTGGGTGGAACTCTACCCTAGAGAGTATTGTGCATGGTGTGCCTTTGGTTGCTTGGCCACTCTATGCAGAGCAACGAATGAATGCAGTTTTGTTAGCTCAAGATTTGACGGTGGCGTGGAGGGTTAAGATGAACGATAAGGGCATTGTAGAGAGTCAAGACATTGCCAAATATGCAAAGGGCCTAATTGAAGGAGAAGAAGGGAAAGTGCTCAGAAAGAGGATGATAGAGCTAAAAGAGGCATCCCAAATGGCTTTGAGCCAAAATGGGTCTTCTACAAAATCACTTGGGGAGGTAGCTCAGATATGGAAGGATCACAAGAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

467

Amino Acids

51.48

Weight (kDa)

6.61

Isoelectric Point (pI)

39.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	251 - 425	6.8e-22	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000589)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22690 AT3G22690 AT3G22690
fragaria_vesca	FvH4_4g12100 FvH4_4g12100 FvH4_4g12100
malus_domestica	MD07G1198500.v1.1 MD12G1181700.v1.1
prunus_persica	Prupe.1G018800_v2.0.a1
pyrus_communis	pycom07g16490
rosa_chinensis	RchiOBHm_Chr1g0328851 RchiOBHm_Chr1g0329061 RchiOBHm_Chr1g0329101 RchiOBHm_Chr1g0329141 RchiOBHm_Chr2g0124781 RchiOBHm_Chr3g0482411 RchiOBHm_Chr3g0482461 RchiOBHm_Chr4g0386511 RchiOBHm_Chr4g0386531 RchiOBHm_Chr4g0386651 RchiOBHm_Chr4g0386671 RchiOBHm_Chr4g0386751 RchiOBHm_Chr4g0386781 RchiOBHm_Chr4g0386861 RchiOBHm_Chr4g0386891 RchiOBHm_Chr4g0386911 RchiOBHm_Chr4g0386991 RchiOBHm_Chr4g0387041 RchiOBHm_Chr4g0387171 RchiOBHm_Chr4g0387241 RchiOBHm_Chr4g0387301 RchiOBHm_Chr4g0387341 RchiOBHm_Chr4g0387441 RchiOBHm_Chr4g0388061 RchiOBHm_Chr4g0389241 RchiOBHm_Chr4g0389361
rosa_laevigata	RLG00000010137 RLG00000010138 RLG00000010145 RLG00000010146 RLG00000018820 RLG00000023352 RLG00000029915
rosa_multiflora	Rmu_co8009444.1_g000001 Rmu_co8455349.1_g000001 Rmu_sc0001375.1_g000001 Rmu_sc0001942.1_g000049 Rmu_sc0001942.1_g000077 Rmu_sc0002939.1_g000001 Rmu_sc0003413.1_g000068 Rmu_sc0003413.1_g000075 Rmu_sc0006571.1_g000008 Rmu_sc0006571.1_g000013 Rmu_sc0006571.1_g000016 Rmu_sc0006648.1_g000004 Rmu_sc0008380.1_g000005 Rmu_sc0009161.1_g000006 Rmu_sc0009161.1_g000007 Rmu_sc0010272.1_g000019 Rmu_sc0011657.1_g000016 Rmu_sc0028698.1_g000001
rosa_roxburghii	Rroxscaffold_2G00119680 Rroxscaffold_2G00119690 Rroxscaffold_5G00334120
rosa_rugosa	Rorug02G0252500 Rorug02G0252500 Rorug03G0196200 Rorug03G0307500 Rorug03G0307800 Rorug03G0308200 Rorug03G0308400 Rorug03G0365200.1 Rorug07G0142900
rosa_samantha	Rh2AG312000 Rh2BG320300 Rh2CG300300 Rh4DG011500 Rh4DG020300
rosa_wichuraiana	Rw2G025200 Rw3G022270 Rw4G001010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	818
AccI	GTMKAC	1 cut(s)	314
AciI	CCGC	2 cut(s)	351, 1062
AclWI	GGATC	5 cut(s)	139, 626, 793, 1060, 1398
AcoI	YGGCCR	1 cut(s)	1133
AcsI	RAATTY	3 cut(s)	377, 532, 889
AcuI	CTGAAG	1 cut(s)	82
AfaI	GTAC	3 cut(s)	404, 476, 602
AfiI	CCNNNNNNNGG	6 cut(s)	35, 41, 226, 267, 524, 1080
AflII	CTTAAG	1 cut(s)	958
AgeI	ACCGGT	1 cut(s)	493
AgsI	TTSAA	8 cut(s)	440, 551, 661, 670, 863, 895, 941, 1268
AhdI	GACNNNNNGTC	1 cut(s)	83
AjnI	CCWGG	1 cut(s)	34
AluBI	AGCT	8 cut(s)	67, 451, 633, 762, 926, 1175, 1309, 1376
AluI	AGCT	8 cut(s)	67, 451, 633, 762, 926, 1175, 1309, 1376
Alw21I	GWGCWC	1 cut(s)	1290
Alw26I	GTCTC	2 cut(s)	722, 902
AlwI	GGATC	5 cut(s)	139, 626, 793, 1060, 1398
AlwNI	CAGNNNCTG	1 cut(s)	731
Ama87I	CYCGRG	1 cut(s)	505
AoxI	GGCC	3 cut(s)	300, 1133, 1258
ApeKI	GCWGC	3 cut(s)	611, 775, 923
ApoI	RAATTY	3 cut(s)	377, 532, 889
ArsI	GACNNNNNNTTYG	2 cut(s)	66, 98
AsiGI	ACCGGT	1 cut(s)	493
AspS9I	GGNCC	5 cut(s)	270, 301, 558, 716, 1258
AsuC2I	CCSGG	3 cut(s)	506, 507, 710
AsuHPI	GGTGA	3 cut(s)	97, 250, 886
AsuNHI	GCTAGC	1 cut(s)	67
AvaI	CYCGRG	1 cut(s)	505
AvaII	GGWCC	3 cut(s)	270, 558, 716
AxyI	CCTNAGG	2 cut(s)	225, 1029
BaeGI	GKGCMC	1 cut(s)	902
BalI	TGGCCA	1 cut(s)	1135
BanI	GGYRCC	1 cut(s)	818
BanII	GRGCYC	1 cut(s)	1027
BbsI	GAAGAC	2 cut(s)	686, 1341
Bbv12I	GWGCWC	1 cut(s)	1290
BbvI	GCAGC	3 cut(s)	598, 787, 935
BccI	CCATC	1 cut(s)	830
BciT130I	CCWGG	1 cut(s)	36
BclI	TGATCA	1 cut(s)	624
BcnI	CCSGG	3 cut(s)	506, 507, 710
BcoDI	GTCTC	2 cut(s)	722, 902
BfaI	CTAG	6 cut(s)	68, 161, 305, 332, 854, 1097
BfrI	CTTAAG	1 cut(s)	958
BisI	GCNGC	3 cut(s)	612, 776, 924
BlsI	GCNGC	3 cut(s)	613, 777, 925
Bme1390I	CCNGG	4 cut(s)	36, 506, 507, 710
Bme18I	GGWCC	3 cut(s)	270, 558, 716
BmeRI	GACNNNNNGTC	1 cut(s)	83
BmeT110I	CYCGRG	1 cut(s)	505
BmgT120I	GGNCC	5 cut(s)	270, 301, 558, 716, 1258
BmiI	GGNNCC	4 cut(s)	272, 820, 1026, 1035
BmrFI	CCNGG	4 cut(s)	36, 506, 507, 710
BmrI	ACTGGG	1 cut(s)	659
BmsI	GCATC	2 cut(s)	346, 1328
BmtI	GCTAGC	1 cut(s)	71
BmuI	ACTGGG	1 cut(s)	659
BpiI	GAAGAC	2 cut(s)	686, 1341
Bpu10I	CCTNAGC	1 cut(s)	372
BpuEI	CTTGAG	2 cut(s)	811, 1161
BpuMI	CCSGG	3 cut(s)	506, 507, 710
BsaBI	GATNNNNATC	1 cut(s)	623
BsaJI	CCNNGG	2 cut(s)	505, 973
BsaWI	WCCGGW	1 cut(s)	493
Bsc4I	CCNNNNNNNGG	6 cut(s)	35, 41, 226, 267, 524, 1080
Bse118I	RCCGGY	2 cut(s)	493, 1058
Bse1I	ACTGG	2 cut(s)	654, 736
Bse21I	CCTNAGG	2 cut(s)	225, 1029
Bse3DI	GCAATG	1 cut(s)	1239
Bse8I	GATNNNNATC	1 cut(s)	623
BseBI	CCWGG	1 cut(s)	36
BseDI	CCNNGG	2 cut(s)	505, 973
BseGI	GGATG	5 cut(s)	114, 361, 515, 1305, 1319
BseJI	GATNNNNATC	1 cut(s)	623
BseLI	CCNNNNNNNGG	6 cut(s)	35, 41, 226, 267, 524, 1080
BseMI	GCAATG	1 cut(s)	1239
BseMII	CTCAG	3 cut(s)	1043, 1303, 1391
BseNI	ACTGG	2 cut(s)	654, 736
BseRI	GAGGAG	1 cut(s)	1017
BseSI	GKGCMC	1 cut(s)	902
BseXI	GCAGC	3 cut(s)	598, 787, 935
BseYI	CCCAGC	2 cut(s)	119, 614
Bsh1285I	CGRYCG	2 cut(s)	714, 951
BshFI	GGCC	3 cut(s)	302, 1135, 1260
BshNI	GGYRCC	1 cut(s)	818
BshTI	ACCGGT	1 cut(s)	493
BsiEI	CGRYCG	2 cut(s)	714, 951
BsiHKAI	GWGCWC	1 cut(s)	1290
BsiHKCI	CYCGRG	1 cut(s)	505
BsiSI	CCGG	4 cut(s)	494, 506, 710, 1059
BslFI	GGGAC	2 cut(s)	11, 256
BslI	CCNNNNNNNGG	6 cut(s)	35, 41, 226, 267, 524, 1080
BsmAI	GTCTC	2 cut(s)	722, 902
BsmFI	GGGAC	2 cut(s)	11, 256
BsmI	GAATGC	2 cut(s)	754, 1165
BsnI	GGCC	3 cut(s)	302, 1135, 1260
BsoBI	CYCGRG	1 cut(s)	505
Bsp1286I	GDGCHC	3 cut(s)	902, 1027, 1290
Bsp143I	GATC	9 cut(s)	131, 294, 340, 519, 618, 624, 785, 1052, 1390
BspACI	CCGC	2 cut(s)	351, 1062
BspANI	GGCC	3 cut(s)	302, 1135, 1260
BspCNI	CTCAG	3 cut(s)	1042, 1302, 1390
BspHI	TCATGA	1 cut(s)	621
BspLI	GGNNCC	4 cut(s)	272, 820, 1026, 1035
BspOI	GCTAGC	1 cut(s)	71
BspPI	GGATC	5 cut(s)	139, 626, 793, 1060, 1398
BspQI	GCTCTTC	1 cut(s)	288
BspT107I	GGYRCC	1 cut(s)	818
BspTI	CTTAAG	1 cut(s)	958
BsrDI	GCAATG	1 cut(s)	1239
BsrFI	RCCGGY	2 cut(s)	493, 1058
BsrI	ACTGG	2 cut(s)	654, 736
BssAI	RCCGGY	2 cut(s)	493, 1058
BssECI	CCNNGG	2 cut(s)	505, 973
BssMI	GATC	9 cut(s)	131, 294, 340, 519, 618, 624, 785, 1052, 1390
BssT1I	CCWWGG	1 cut(s)	973
Bst2UI	CCWGG	1 cut(s)	36
Bst4CI	ACNGT	2 cut(s)	527, 1189
Bst6I	CTCTTC	1 cut(s)	288
BstAFI	CTTAAG	1 cut(s)	958
BstAPI	GCANNNNNTGC	1 cut(s)	1117
BstC8I	GCNNGC	1 cut(s)	69
BstDEI	CTNAG	6 cut(s)	225, 372, 594, 1029, 1289, 1377
BstENI	CCTNNNNNAGG	1 cut(s)	224
BstF5I	GGATG	5 cut(s)	114, 361, 515, 1305, 1319
BstKTI	GATC	9 cut(s)	134, 297, 343, 522, 621, 627, 788, 1055, 1393
BstMAI	GTCTC	2 cut(s)	722, 902
BstMBI	GATC	9 cut(s)	131, 294, 340, 519, 618, 624, 785, 1052, 1390
BstMCI	CGRYCG	2 cut(s)	714, 951
BstMWI	GCNNNNNNNGC	3 cut(s)	662, 1117, 1250
BstNI	CCWGG	1 cut(s)	36
BstSCI	CCNGG	4 cut(s)	34, 504, 505, 708
BstSLI	GKGCMC	1 cut(s)	902
BstV1I	GCAGC	3 cut(s)	598, 787, 935
BstV2I	GAAGAC	2 cut(s)	686, 1341
Bsu36I	CCTNAGG	2 cut(s)	225, 1029
BsuRI	GGCC	3 cut(s)	302, 1135, 1260
BtsCI	GGATG	5 cut(s)	114, 361, 515, 1305, 1319
BtsIMutI	CAGTG	1 cut(s)	795
Cac8I	GCNNGC	1 cut(s)	69
CaiI	CAGNNNCTG	1 cut(s)	731
CciI	TCATGA	1 cut(s)	621
Cfr10I	RCCGGY	2 cut(s)	493, 1058
Cfr13I	GGNCC	5 cut(s)	270, 301, 558, 716, 1258
Cfr9I	CCCGGG	1 cut(s)	505
CpoI	CGGWCCG	1 cut(s)	716
CseI	GACGC	1 cut(s)	91
Csp6I	GTAC	3 cut(s)	403, 475, 601
CspAI	ACCGGT	1 cut(s)	493
CspI	CGGWCCG	1 cut(s)	716
CviAII	CATG	5 cut(s)	14, 262, 622, 1049, 1112
CviQI	GTAC	3 cut(s)	403, 475, 601
DdeI	CTNAG	6 cut(s)	225, 372, 594, 1029, 1289, 1377
DpnI	GATC	9 cut(s)	133, 296, 342, 521, 620, 626, 787, 1054, 1392
DpnII	GATC	9 cut(s)	131, 294, 340, 519, 618, 624, 785, 1052, 1390
DriI	GACNNNNNGTC	1 cut(s)	83
EaeI	YGGCCR	1 cut(s)	1133
Eam1104I	CTCTTC	1 cut(s)	288
Eam1105I	GACNNNNNGTC	1 cut(s)	83
EarI	CTCTTC	1 cut(s)	288
Eco130I	CCWWGG	1 cut(s)	973
Eco24I	GRGCYC	1 cut(s)	1027
Eco47I	GGWCC	3 cut(s)	270, 558, 716
Eco57I	CTGAAG	1 cut(s)	82
Eco81I	CCTNAGG	2 cut(s)	225, 1029
Eco88I	CYCGRG	1 cut(s)	505
EcoNI	CCTNNNNNAGG	1 cut(s)	224
EcoO109I	RGGNCCY	2 cut(s)	301, 1258
EcoRI	GAATTC	1 cut(s)	377
EcoRII	CCWGG	1 cut(s)	34
EcoT14I	CCWWGG	1 cut(s)	973
EcoT38I	GRGCYC	1 cut(s)	1027
ErhI	CCWWGG	1 cut(s)	973
FaeI	CATG	5 cut(s)	17, 265, 625, 1052, 1115
FaqI	GGGAC	2 cut(s)	11, 256
FatI	CATG	5 cut(s)	13, 261, 621, 1048, 1111
FauI	CCCGC	2 cut(s)	344, 1055
FbaI	TGATCA	1 cut(s)	624
FblI	GTMKAC	1 cut(s)	314
Fnu4HI	GCNGC	3 cut(s)	612, 776, 924
FokI	GGATG	5 cut(s)	101, 368, 522, 1306, 1312
FriOI	GRGCYC	1 cut(s)	1027
Fsp4HI	GCNGC	3 cut(s)	612, 776, 924
FspBI	CTAG	6 cut(s)	68, 161, 305, 332, 854, 1097
GluI	GCNGC	3 cut(s)	612, 776, 924
GsaI	CCCAGC	2 cut(s)	123, 618
HaeIII	GGCC	3 cut(s)	302, 1135, 1260
HapII	CCGG	4 cut(s)	494, 506, 710, 1059
HgaI	GACGC	1 cut(s)	91
Hin1II	CATG	5 cut(s)	17, 265, 625, 1052, 1115
HincII	GTYRAC	1 cut(s)	315
HindII	GTYRAC	1 cut(s)	315
HinfI	GANTC	8 cut(s)	249, 265, 290, 311, 316, 542, 1045, 1231
HpaII	CCGG	4 cut(s)	494, 506, 710, 1059
HphI	GGTGA	3 cut(s)	97, 250, 886
Hpy166II	GTNNAC	2 cut(s)	88, 315
Hpy188I	TCNGA	3 cut(s)	716, 1292, 1380
Hpy188III	TCNNGA	6 cut(s)	161, 287, 551, 622, 1178, 1235
Hpy8I	GTNNAC	2 cut(s)	88, 315
Hpy99I	CGWCG	2 cut(s)	128, 131
HpyAV	CCTTC	4 cut(s)	118, 1262, 1271, 1381
HpyCH4III	ACNGT	2 cut(s)	527, 1189
HpyCH4IV	ACGT	2 cut(s)	588, 999
HpyCH4V	TGCA	8 cut(s)	206, 646, 775, 923, 1111, 1145, 1163, 1253
HpyF10VI	GCNNNNNNNGC	3 cut(s)	662, 1117, 1250
HpyF3I	CTNAG	6 cut(s)	225, 372, 594, 1029, 1289, 1377
HpySE526I	ACGT	2 cut(s)	588, 999
Hsp92II	CATG	5 cut(s)	17, 265, 625, 1052, 1115
Ksp22I	TGATCA	1 cut(s)	624
Kzo9I	GATC	9 cut(s)	131, 294, 340, 519, 618, 624, 785, 1052, 1390
LguI	GCTCTTC	1 cut(s)	288
LmnI	GCTCC	1 cut(s)	1030
Lsp1109I	GCAGC	3 cut(s)	598, 787, 935
LweI	GCATC	2 cut(s)	346, 1328
MaeI	CTAG	6 cut(s)	68, 161, 305, 332, 854, 1097
MaeII	ACGT	2 cut(s)	588, 999
MaeIII	GTNAC	3 cut(s)	103, 287, 1012
MalI	GATC	9 cut(s)	133, 296, 342, 521, 620, 626, 787, 1054, 1392
MboI	GATC	9 cut(s)	131, 294, 340, 519, 618, 624, 785, 1052, 1390
MboII	GAAGA	5 cut(s)	103, 275, 686, 1286, 1341
MhlI	GDGCHC	3 cut(s)	902, 1027, 1290
MlsI	TGGCCA	1 cut(s)	1135
MluCI	AATT	7 cut(s)	377, 440, 532, 702, 889, 1038, 1263
MluNI	TGGCCA	1 cut(s)	1135
MlyI	GAGTC	7 cut(s)	259, 284, 310, 320, 536, 1054, 1240
MmeI	TCCRAC	1 cut(s)	694
Mox20I	TGGCCA	1 cut(s)	1135
MscI	TGGCCA	1 cut(s)	1135
MseI	TTAA	4 cut(s)	234, 242, 959, 1203
Msp20I	TGGCCA	1 cut(s)	1135
MspCI	CTTAAG	1 cut(s)	958
MspI	CCGG	4 cut(s)	494, 506, 710, 1059
MspR9I	CCNGG	4 cut(s)	36, 506, 507, 710
Mva1269I	GAATGC	2 cut(s)	754, 1165
MvaI	CCWGG	1 cut(s)	36
MwoI	GCNNNNNNNGC	3 cut(s)	662, 1117, 1250
NciI	CCSGG	3 cut(s)	506, 507, 710
NdeII	GATC	9 cut(s)	131, 294, 340, 519, 618, 624, 785, 1052, 1390
NheI	GCTAGC	1 cut(s)	67
NlaIII	CATG	5 cut(s)	17, 265, 625, 1052, 1115
NlaIV	GGNNCC	4 cut(s)	272, 820, 1026, 1035
NmeAIII	GCCGAG	1 cut(s)	334
NmuCI	GTSAC	2 cut(s)	103, 287
PagI	TCATGA	1 cut(s)	621
PciSI	GCTCTTC	1 cut(s)	288
PctI	GAATGC	2 cut(s)	754, 1165
PfeI	GAWTC	1 cut(s)	249
PflFI	GACNNNGTC	2 cut(s)	268, 684
PinAI	ACCGGT	1 cut(s)	493
PkrI	GCNGC	3 cut(s)	613, 777, 925
PleI	GAGTC	7 cut(s)	259, 284, 310, 319, 536, 1053, 1239
PpsI	GAGTC	7 cut(s)	259, 284, 310, 319, 536, 1053, 1239
Psp6I	CCWGG	1 cut(s)	34
PspFI	CCCAGC	2 cut(s)	119, 614
PspGI	CCWGG	1 cut(s)	34
PspN4I	GGNNCC	4 cut(s)	272, 820, 1026, 1035
PspPI	GGNCC	5 cut(s)	270, 301, 558, 716, 1258
PstNI	CAGNNNCTG	1 cut(s)	731
PsyI	GACNNNGTC	2 cut(s)	268, 684
RsaI	GTAC	3 cut(s)	404, 476, 602
RsaNI	GTAC	3 cut(s)	403, 475, 601
Rsr2I	CGGWCCG	1 cut(s)	716
RsrII	CGGWCCG	1 cut(s)	716
SalI	GTCGAC	1 cut(s)	313
SapI	GCTCTTC	1 cut(s)	288
SaqAI	TTAA	4 cut(s)	234, 242, 959, 1203
SatI	GCNGC	3 cut(s)	612, 776, 924
Sau3AI	GATC	9 cut(s)	131, 294, 340, 519, 618, 624, 785, 1052, 1390
Sau96I	GGNCC	5 cut(s)	270, 301, 558, 716, 1258
SchI	GAGTC	7 cut(s)	259, 284, 310, 320, 536, 1054, 1240
ScrFI	CCNGG	4 cut(s)	36, 506, 507, 710
SduI	GDGCHC	3 cut(s)	902, 1027, 1290
SfaNI	GCATC	2 cut(s)	346, 1328
SinI	GGWCC	3 cut(s)	270, 558, 716
SmaI	CCCGGG	1 cut(s)	507
SmlI	CTYRAG	3 cut(s)	826, 958, 1176
SmoI	CTYRAG	3 cut(s)	826, 958, 1176
Sse9I	AATT	7 cut(s)	377, 440, 532, 702, 889, 1038, 1263
SsiI	CCGC	2 cut(s)	351, 1062
SspMI	CTAG	6 cut(s)	68, 161, 305, 332, 854, 1097
StyD4I	CCNGG	4 cut(s)	34, 504, 505, 708
StyI	CCWWGG	1 cut(s)	973
TaaI	ACNGT	2 cut(s)	527, 1189
TaiI	ACGT	2 cut(s)	591, 1002
TaqI	TCGA	6 cut(s)	293, 314, 381, 453, 737, 947
TaqII	GACCGA	3 cut(s)	258, 733, 965
TasI	AATT	7 cut(s)	377, 440, 532, 702, 889, 1038, 1263
TatI	WGTACW	1 cut(s)	474
TfiI	GAWTC	1 cut(s)	249
Tru1I	TTAA	4 cut(s)	234, 242, 959, 1203
Tru9I	TTAA	4 cut(s)	234, 242, 959, 1203
TscAI	CASTG	1 cut(s)	795
TseFI	GTSAC	2 cut(s)	103, 287
TseI	GCWGC	3 cut(s)	611, 775, 923
Tsp45I	GTSAC	2 cut(s)	103, 287
TspDTI	ATGAA	6 cut(s)	17, 103, 792, 854, 1172, 1223
TspGWI	ACGGA	1 cut(s)	144
TspMI	CCCGGG	1 cut(s)	505
TspRI	CASTG	1 cut(s)	795
Tth111I	GACNNNGTC	2 cut(s)	268, 684
Vha464I	CTTAAG	1 cut(s)	958
VpaK11BI	GGWCC	3 cut(s)	270, 558, 716
XagI	CCTNNNNNAGG	1 cut(s)	224
XapI	RAATTY	3 cut(s)	377, 532, 889
XbaI	TCTAGA	1 cut(s)	160
XmaI	CCCGGG	1 cut(s)	505
XmiI	GTMKAC	1 cut(s)	314
XspI	CTAG	6 cut(s)	68, 161, 305, 332, 854, 1097

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.