Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 505 |
| AccB1I | GGYRCC | 1 cut(s) | 505 |
| AciI | CCGC | 1 cut(s) | 4 |
| AcoI | YGGCCR | 2 cut(s) | 126, 289 |
| AfaI | GTAC | 3 cut(s) | 216, 507, 693 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 298 |
| AflIII | ACRYGT | 1 cut(s) | 27 |
| AgsI | TTSAA | 1 cut(s) | 527 |
| AjnI | CCWGG | 1 cut(s) | 508 |
| AluBI | AGCT | 5 cut(s) | 17, 152, 160, 314, 443 |
| AluI | AGCT | 5 cut(s) | 17, 152, 160, 314, 443 |
| Alw21I | GWGCWC | 2 cut(s) | 124, 154 |
| Ama87I | CYCGRG | 1 cut(s) | 8 |
| AoxI | GGCC | 2 cut(s) | 126, 289 |
| ApeKI | GCWGC | 2 cut(s) | 110, 377 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 263, 495 |
| Asp718I | GGTACC | 1 cut(s) | 505 |
| AsuHPI | GGTGA | 3 cut(s) | 56, 199, 575 |
| AvaI | CYCGRG | 1 cut(s) | 8 |
| BaeGI | GKGCMC | 1 cut(s) | 368 |
| BalI | TGGCCA | 1 cut(s) | 128 |
| BanI | GGYRCC | 1 cut(s) | 505 |
| BanII | GRGCYC | 1 cut(s) | 154 |
| Bbv12I | GWGCWC | 2 cut(s) | 124, 154 |
| BbvI | GCAGC | 2 cut(s) | 122, 364 |
| BciT130I | CCWGG | 1 cut(s) | 510 |
| BfaI | CTAG | 2 cut(s) | 36, 155 |
| BisI | GCNGC | 3 cut(s) | 5, 111, 378 |
| BlsI | GCNGC | 3 cut(s) | 6, 112, 379 |
| BmcAI | AGTACT | 2 cut(s) | 216, 693 |
| Bme1390I | CCNGG | 1 cut(s) | 510 |
| BmeT110I | CYCGRG | 1 cut(s) | 8 |
| BmiI | GGNNCC | 3 cut(s) | 345, 507, 590 |
| BmrFI | CCNGG | 1 cut(s) | 510 |
| BmsI | GCATC | 5 cut(s) | 446, 503, 556, 594, 622 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 539, 571 |
| BsaWI | WCCGGW | 1 cut(s) | 557 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 298 |
| Bse1I | ACTGG | 2 cut(s) | 129, 409 |
| Bse3DI | GCAATG | 1 cut(s) | 594 |
| BseBI | CCWGG | 1 cut(s) | 510 |
| BseGI | GGATG | 1 cut(s) | 518 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 298 |
| BseMI | GCAATG | 1 cut(s) | 594 |
| BseMII | CTCAG | 1 cut(s) | 640 |
| BseNI | ACTGG | 2 cut(s) | 129, 409 |
| BseRI | GAGGAG | 1 cut(s) | 601 |
| BseSI | GKGCMC | 1 cut(s) | 368 |
| BseXI | GCAGC | 2 cut(s) | 122, 364 |
| BseYI | CCCAGC | 1 cut(s) | 443 |
| BshFI | GGCC | 2 cut(s) | 128, 291 |
| BshNI | GGYRCC | 1 cut(s) | 505 |
| BsiHKAI | GWGCWC | 2 cut(s) | 124, 154 |
| BsiHKCI | CYCGRG | 1 cut(s) | 8 |
| BsiSI | CCGG | 1 cut(s) | 558 |
| BslFI | GGGAC | 1 cut(s) | 25 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 298 |
| BsmFI | GGGAC | 1 cut(s) | 25 |
| BsnI | GGCC | 2 cut(s) | 128, 291 |
| BsoBI | CYCGRG | 1 cut(s) | 8 |
| Bsp1286I | GDGCHC | 3 cut(s) | 124, 154, 368 |
| Bsp143I | GATC | 3 cut(s) | 280, 319, 649 |
| BspACI | CCGC | 1 cut(s) | 4 |
| BspANI | GGCC | 2 cut(s) | 128, 291 |
| BspCNI | CTCAG | 1 cut(s) | 639 |
| BspHI | TCATGA | 1 cut(s) | 544 |
| BspLI | GGNNCC | 3 cut(s) | 345, 507, 590 |
| BspT107I | GGYRCC | 1 cut(s) | 505 |
| BsrDI | GCAATG | 1 cut(s) | 594 |
| BsrI | ACTGG | 2 cut(s) | 129, 409 |
| BssMI | GATC | 3 cut(s) | 280, 319, 649 |
| Bst2UI | CCWGG | 1 cut(s) | 510 |
| Bst6I | CTCTTC | 1 cut(s) | 82 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 461 |
| BstC8I | GCNNGC | 3 cut(s) | 150, 335, 637 |
| BstDEI | CTNAG | 2 cut(s) | 626, 699 |
| BstEII | GGTNACC | 1 cut(s) | 44 |
| BstF5I | GGATG | 1 cut(s) | 518 |
| BstKTI | GATC | 3 cut(s) | 283, 322, 652 |
| BstMBI | GATC | 3 cut(s) | 280, 319, 649 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 107, 119, 461 |
| BstNI | CCWGG | 1 cut(s) | 510 |
| BstNSI | RCATGY | 3 cut(s) | 31, 175, 337 |
| BstPI | GGTNACC | 1 cut(s) | 44 |
| BstSCI | CCNGG | 1 cut(s) | 508 |
| BstSLI | GKGCMC | 1 cut(s) | 368 |
| BstV1I | GCAGC | 2 cut(s) | 122, 364 |
| BsuRI | GGCC | 2 cut(s) | 128, 291 |
| BtsCI | GGATG | 1 cut(s) | 518 |
| BtsIMutI | CAGTG | 1 cut(s) | 122 |
| Cac8I | GCNNGC | 3 cut(s) | 150, 335, 637 |
| CciI | TCATGA | 1 cut(s) | 544 |
| Csp6I | GTAC | 3 cut(s) | 215, 506, 692 |
| CviQI | GTAC | 3 cut(s) | 215, 506, 692 |
| DdeI | CTNAG | 2 cut(s) | 626, 699 |
| DpnI | GATC | 3 cut(s) | 282, 321, 651 |
| DpnII | GATC | 3 cut(s) | 280, 319, 649 |
| EaeI | YGGCCR | 2 cut(s) | 126, 289 |
| Eam1104I | CTCTTC | 1 cut(s) | 82 |
| EarI | CTCTTC | 1 cut(s) | 82 |
| Ecl136II | GAGCTC | 1 cut(s) | 152 |
| Eco24I | GRGCYC | 1 cut(s) | 154 |
| Eco53kI | GAGCTC | 1 cut(s) | 152 |
| Eco88I | CYCGRG | 1 cut(s) | 8 |
| Eco91I | GGTNACC | 1 cut(s) | 44 |
| EcoICRI | GAGCTC | 1 cut(s) | 152 |
| EcoO65I | GGTNACC | 1 cut(s) | 44 |
| EcoRII | CCWGG | 1 cut(s) | 508 |
| EcoT22I | ATGCAT | 2 cut(s) | 177, 439 |
| EcoT38I | GRGCYC | 1 cut(s) | 154 |
| FaqI | GGGAC | 1 cut(s) | 25 |
| Fnu4HI | GCNGC | 3 cut(s) | 5, 111, 378 |
| FokI | GGATG | 1 cut(s) | 525 |
| FriOI | GRGCYC | 1 cut(s) | 154 |
| Fsp4HI | GCNGC | 3 cut(s) | 5, 111, 378 |
| FspBI | CTAG | 2 cut(s) | 36, 155 |
| GluI | GCNGC | 3 cut(s) | 5, 111, 378 |
| GsaI | CCCAGC | 1 cut(s) | 447 |
| HaeIII | GGCC | 2 cut(s) | 128, 291 |
| HapII | CCGG | 1 cut(s) | 558 |
| HincII | GTYRAC | 1 cut(s) | 25 |
| HindII | GTYRAC | 1 cut(s) | 25 |
| HinfI | GANTC | 3 cut(s) | 496, 541, 624 |
| HpaII | CCGG | 1 cut(s) | 558 |
| HphI | GGTGA | 3 cut(s) | 56, 199, 575 |
| Hpy166II | GTNNAC | 2 cut(s) | 25, 552 |
| Hpy188I | TCNGA | 2 cut(s) | 501, 629 |
| Hpy188III | TCNNGA | 5 cut(s) | 10, 155, 545, 647, 653 |
| Hpy8I | GTNNAC | 2 cut(s) | 25, 552 |
| HpyAV | CCTTC | 3 cut(s) | 485, 496, 676 |
| HpyCH4IV | ACGT | 1 cut(s) | 642 |
| HpyCH4V | TGCA | 8 cut(s) | 59, 133, 175, 273, 437, 464, 516, 607 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 107, 119, 461 |
| HpyF3I | CTNAG | 2 cut(s) | 626, 699 |
| HpySE526I | ACGT | 1 cut(s) | 642 |
| KpnI | GGTACC | 1 cut(s) | 509 |
| Kzo9I | GATC | 3 cut(s) | 280, 319, 649 |
| LmnI | GCTCC | 3 cut(s) | 119, 145, 588 |
| Lsp1109I | GCAGC | 2 cut(s) | 122, 364 |
| LweI | GCATC | 5 cut(s) | 446, 503, 556, 594, 622 |
| MaeI | CTAG | 2 cut(s) | 36, 155 |
| MaeII | ACGT | 1 cut(s) | 642 |
| MaeIII | GTNAC | 1 cut(s) | 44 |
| MalI | GATC | 3 cut(s) | 282, 321, 651 |
| MboI | GATC | 3 cut(s) | 280, 319, 649 |
| MboII | GAAGA | 2 cut(s) | 99, 320 |
| MhlI | GDGCHC | 3 cut(s) | 124, 154, 368 |
| MlsI | TGGCCA | 1 cut(s) | 128 |
| MluNI | TGGCCA | 1 cut(s) | 128 |
| MlyI | GAGTC | 1 cut(s) | 618 |
| MnlI | CCTC | 6 cut(s) | 60, 393, 465, 481, 565, 579 |
| Mox20I | TGGCCA | 1 cut(s) | 128 |
| Mph1103I | ATGCAT | 2 cut(s) | 177, 439 |
| MroXI | GAANNNNTTC | 2 cut(s) | 263, 495 |
| MscI | TGGCCA | 1 cut(s) | 128 |
| MseI | TTAA | 2 cut(s) | 531, 669 |
| MslI | CAYNNNNRTG | 2 cut(s) | 272, 338 |
| Msp20I | TGGCCA | 1 cut(s) | 128 |
| MspA1I | CMGCKG | 1 cut(s) | 443 |
| MspI | CCGG | 1 cut(s) | 558 |
| MspR9I | CCNGG | 1 cut(s) | 510 |
| MvaI | CCWGG | 1 cut(s) | 510 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 107, 119, 461 |
| NdeII | GATC | 3 cut(s) | 280, 319, 649 |
| NlaIV | GGNNCC | 3 cut(s) | 345, 507, 590 |
| NmeAIII | GCCGAG | 1 cut(s) | 317 |
| NmuCI | GTSAC | 1 cut(s) | 44 |
| NsiI | ATGCAT | 2 cut(s) | 177, 439 |
| NspI | RCATGY | 3 cut(s) | 31, 175, 337 |
| PaeI | GCATGC | 1 cut(s) | 337 |
| PagI | TCATGA | 1 cut(s) | 544 |
| PciI | ACATGT | 1 cut(s) | 27 |
| PdmI | GAANNNNTTC | 2 cut(s) | 263, 495 |
| PfeI | GAWTC | 2 cut(s) | 496, 541 |
| PflFI | GACNNNGTC | 1 cut(s) | 659 |
| PkrI | GCNGC | 3 cut(s) | 6, 112, 379 |
| PleI | GAGTC | 1 cut(s) | 618 |
| PpsI | GAGTC | 1 cut(s) | 618 |
| PscI | ACATGT | 1 cut(s) | 27 |
| Psp124BI | GAGCTC | 1 cut(s) | 154 |
| Psp6I | CCWGG | 1 cut(s) | 508 |
| PspEI | GGTNACC | 1 cut(s) | 44 |
| PspFI | CCCAGC | 1 cut(s) | 443 |
| PspGI | CCWGG | 1 cut(s) | 508 |
| PspN4I | GGNNCC | 3 cut(s) | 345, 507, 590 |
| PsyI | GACNNNGTC | 1 cut(s) | 659 |
| PvuII | CAGCTG | 1 cut(s) | 443 |
| RsaI | GTAC | 3 cut(s) | 216, 507, 693 |
| RsaNI | GTAC | 3 cut(s) | 215, 506, 692 |
| RseI | CAYNNNNRTG | 2 cut(s) | 272, 338 |
| SacI | GAGCTC | 1 cut(s) | 154 |
| SaqAI | TTAA | 2 cut(s) | 531, 669 |
| SatI | GCNGC | 3 cut(s) | 5, 111, 378 |
| Sau3AI | GATC | 3 cut(s) | 280, 319, 649 |
| ScaI | AGTACT | 2 cut(s) | 216, 693 |
| SchI | GAGTC | 1 cut(s) | 618 |
| ScrFI | CCNGG | 1 cut(s) | 510 |
| SduI | GDGCHC | 3 cut(s) | 124, 154, 368 |
| SfaNI | GCATC | 5 cut(s) | 446, 503, 556, 594, 622 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 272, 338 |
| SphI | GCATGC | 1 cut(s) | 337 |
| SsiI | CCGC | 1 cut(s) | 4 |
| SspMI | CTAG | 2 cut(s) | 36, 155 |
| SstI | GAGCTC | 1 cut(s) | 154 |
| StyD4I | CCNGG | 1 cut(s) | 508 |
| TaiI | ACGT | 1 cut(s) | 645 |
| TaqI | TCGA | 2 cut(s) | 165, 704 |
| TatI | WGTACW | 2 cut(s) | 214, 691 |
| TauI | GCSGC | 1 cut(s) | 7 |
| TfiI | GAWTC | 2 cut(s) | 496, 541 |
| Tru1I | TTAA | 2 cut(s) | 531, 669 |
| Tru9I | TTAA | 2 cut(s) | 531, 669 |
| TscAI | CASTG | 1 cut(s) | 129 |
| TseFI | GTSAC | 1 cut(s) | 44 |
| TseI | GCWGC | 2 cut(s) | 110, 377 |
| Tsp45I | GTSAC | 1 cut(s) | 44 |
| TspDTI | ATGAA | 3 cut(s) | 256, 401, 533 |
| TspGWI | ACGGA | 2 cut(s) | 271, 511 |
| TspRI | CASTG | 1 cut(s) | 129 |
| Tth111I | GACNNNGTC | 1 cut(s) | 659 |
| XbaI | TCTAGA | 1 cut(s) | 154 |
| XceI | RCATGY | 3 cut(s) | 31, 175, 337 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 121 |
| XmnI | GAANNNNTTC | 2 cut(s) | 263, 495 |
| XspI | CTAG | 2 cut(s) | 36, 155 |
| ZrmI | AGTACT | 2 cut(s) | 216, 693 |
| Zsp2I | ATGCAT | 2 cut(s) | 177, 439 |