Pentatricopeptide repeat-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| E_motif | PF20431 | 20 - 76 | 4.9e-14 | E motif |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 223 |
| AgsI | TTSAA | 3 cut(s) | 144, 202, 218 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 48 |
| AluBI | AGCT | 2 cut(s) | 89, 161 |
| AluI | AGCT | 2 cut(s) | 89, 161 |
| ApeKI | GCWGC | 2 cut(s) | 77, 86 |
| BaeGI | GKGCMC | 1 cut(s) | 35 |
| BanI | GGYRCC | 1 cut(s) | 223 |
| BbvI | GCAGC | 2 cut(s) | 89, 98 |
| BisI | GCNGC | 2 cut(s) | 78, 87 |
| BlsI | GCNGC | 2 cut(s) | 79, 88 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 48 |
| BmiI | GGNNCC | 2 cut(s) | 12, 225 |
| BmsI | GCATC | 2 cut(s) | 107, 164 |
| BseMII | CTCAG | 1 cut(s) | 128 |
| BseRI | GAGGAG | 1 cut(s) | 133 |
| BseSI | GKGCMC | 1 cut(s) | 35 |
| BseXI | GCAGC | 2 cut(s) | 89, 98 |
| BseYI | CCCAGC | 1 cut(s) | 161 |
| BshNI | GGYRCC | 1 cut(s) | 223 |
| Bsp1286I | GDGCHC | 1 cut(s) | 35 |
| BspCNI | CTCAG | 1 cut(s) | 127 |
| BspLI | GGNNCC | 2 cut(s) | 12, 225 |
| BspT107I | GGYRCC | 1 cut(s) | 223 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 83 |
| BstDEI | CTNAG | 1 cut(s) | 114 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 83, 86, 95 |
| BstSLI | GKGCMC | 1 cut(s) | 35 |
| BstV1I | GCAGC | 2 cut(s) | 89, 98 |
| CviAII | CATG | 2 cut(s) | 131, 228 |
| CviJI | RGCY | 3 cut(s) | 89, 161, 193 |
| CviKI_1 | RGCY | 3 cut(s) | 89, 161, 193 |
| DdeI | CTNAG | 1 cut(s) | 114 |
| DriI | GACNNNNNGTC | 1 cut(s) | 48 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 48 |
| EcoT22I | ATGCAT | 1 cut(s) | 157 |
| FaeI | CATG | 2 cut(s) | 134, 231 |
| FaiI | YATR | 7 cut(s) | 82, 84, 132, 149, 151, 153, 229 |
| FatI | CATG | 2 cut(s) | 130, 227 |
| FauNDI | CATATG | 1 cut(s) | 82 |
| Fnu4HI | GCNGC | 2 cut(s) | 78, 87 |
| Fsp4HI | GCNGC | 2 cut(s) | 78, 87 |
| GluI | GCNGC | 2 cut(s) | 78, 87 |
| GsaI | CCCAGC | 1 cut(s) | 165 |
| Hin1II | CATG | 2 cut(s) | 134, 231 |
| HinfI | GANTC | 1 cut(s) | 214 |
| Hpy188I | TCNGA | 1 cut(s) | 117 |
| Hpy188III | TCNNGA | 1 cut(s) | 40 |
| Hpy99I | CGWCG | 1 cut(s) | 71 |
| HpyAV | CCTTC | 1 cut(s) | 196 |
| HpyCH4IV | ACGT | 1 cut(s) | 66 |
| HpyCH4V | TGCA | 3 cut(s) | 86, 155, 182 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 83, 86, 95 |
| HpyF3I | CTNAG | 1 cut(s) | 114 |
| HpySE526I | ACGT | 1 cut(s) | 66 |
| Hsp92II | CATG | 2 cut(s) | 134, 231 |
| LpnPI | CCDG | 2 cut(s) | 80, 147 |
| Lsp1109I | GCAGC | 2 cut(s) | 89, 98 |
| LweI | GCATC | 2 cut(s) | 107, 164 |
| MaeII | ACGT | 1 cut(s) | 66 |
| MfeI | CAATTG | 1 cut(s) | 197 |
| MhlI | GDGCHC | 1 cut(s) | 35 |
| MluCI | AATT | 2 cut(s) | 104, 197 |
| MnlI | CCTC | 2 cut(s) | 111, 183 |
| Mph1103I | ATGCAT | 1 cut(s) | 157 |
| MspA1I | CMGCKG | 2 cut(s) | 89, 161 |
| MunI | CAATTG | 1 cut(s) | 197 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 83, 86, 95 |
| NdeI | CATATG | 1 cut(s) | 82 |
| NlaIII | CATG | 2 cut(s) | 134, 231 |
| NlaIV | GGNNCC | 2 cut(s) | 12, 225 |
| NsiI | ATGCAT | 1 cut(s) | 157 |
| PfeI | GAWTC | 1 cut(s) | 214 |
| PkrI | GCNGC | 2 cut(s) | 79, 88 |
| PspFI | CCCAGC | 1 cut(s) | 161 |
| PspN4I | GGNNCC | 2 cut(s) | 12, 225 |
| PvuII | CAGCTG | 2 cut(s) | 89, 161 |
| SatI | GCNGC | 2 cut(s) | 78, 87 |
| SduI | GDGCHC | 1 cut(s) | 35 |
| SetI | ASST | 4 cut(s) | 16, 69, 91, 163 |
| SfaNI | GCATC | 2 cut(s) | 107, 164 |
| SgeI | CNNG | 5 cut(s) | 52, 60, 107, 143, 174 |
| Sse9I | AATT | 2 cut(s) | 104, 197 |
| TaiI | ACGT | 1 cut(s) | 69 |
| TaqI | TCGA | 2 cut(s) | 52, 69 |
| TasI | AATT | 2 cut(s) | 104, 197 |
| TfiI | GAWTC | 1 cut(s) | 214 |
| TseI | GCWGC | 2 cut(s) | 77, 86 |
| TspDTI | ATGAA | 1 cut(s) | 119 |
| Zsp2I | ATGCAT | 1 cut(s) | 157 |