Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 403, 883 |
| Acc36I | ACCTGC | 4 cut(s) | 403, 883, 1787, 2228 |
| Acc65I | GGTACC | 1 cut(s) | 469 |
| AccB1I | GGYRCC | 4 cut(s) | 385, 415, 469, 923 |
| AccI | GTMKAC | 3 cut(s) | 1533, 2311, 2541 |
| AccII | CGCG | 2 cut(s) | 730, 2173 |
| AciI | CCGC | 4 cut(s) | 1794, 2043, 2322, 2467 |
| AclWI | GGATC | 9 cut(s) | 328, 815, 1534, 1982, 2155, 2291, 2304, 2360, 2562 |
| AcoI | YGGCCR | 2 cut(s) | 1733, 2386 |
| AcsI | RAATTY | 6 cut(s) | 524, 662, 1076, 2214, 2358, 2504 |
| AcuI | CTGAAG | 3 cut(s) | 257, 486, 1680 |
| AcyI | GRCGYC | 2 cut(s) | 2046, 2308 |
| AdeI | CACNNNGTG | 1 cut(s) | 682 |
| AfaI | GTAC | 6 cut(s) | 471, 551, 713, 978, 2023, 2471 |
| AfeI | AGCGCT | 1 cut(s) | 1304 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 565, 781, 1196, 1210 |
| AhlI | ACTAGT | 1 cut(s) | 2314 |
| AjnI | CCWGG | 1 cut(s) | 474 |
| AleI | CACNNNNGTG | 1 cut(s) | 514 |
| Alw21I | GWGCWC | 3 cut(s) | 678, 966, 2143 |
| Alw26I | GTCTC | 4 cut(s) | 265, 1085, 1911, 1998 |
| Alw44I | GTGCAC | 1 cut(s) | 674 |
| AlwI | GGATC | 9 cut(s) | 328, 815, 1534, 1982, 2155, 2291, 2304, 2360, 2562 |
| Aor51HI | AGCGCT | 1 cut(s) | 1304 |
| AoxI | GGCC | 5 cut(s) | 1499, 1733, 1791, 2209, 2386 |
| ApaLI | GTGCAC | 1 cut(s) | 674 |
| ApoI | RAATTY | 6 cut(s) | 524, 662, 1076, 2214, 2358, 2504 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 285, 317 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2484 |
| Asp718I | GGTACC | 1 cut(s) | 469 |
| AspLEI | GCGC | 2 cut(s) | 1305, 1586 |
| AspS9I | GGNCC | 3 cut(s) | 790, 1213, 1741 |
| AsuC2I | CCSGG | 1 cut(s) | 2270 |
| AsuHPI | GGTGA | 7 cut(s) | 907, 917, 922, 1193, 1847, 1878, 2450 |
| AsuNHI | GCTAGC | 1 cut(s) | 370 |
| AvaII | GGWCC | 3 cut(s) | 790, 1213, 1741 |
| BaeGI | GKGCMC | 1 cut(s) | 678 |
| BamHI | GGATCC | 1 cut(s) | 2296 |
| BanI | GGYRCC | 4 cut(s) | 385, 415, 469, 923 |
| BanII | GRGCYC | 1 cut(s) | 1808 |
| BbsI | GAAGAC | 3 cut(s) | 1046, 1262, 1943 |
| Bbv12I | GWGCWC | 3 cut(s) | 678, 966, 2143 |
| BbvCI | CCTCAGC | 1 cut(s) | 1275 |
| BccI | CCATC | 4 cut(s) | 139, 451, 896, 1925 |
| BceAI | ACGGC | 2 cut(s) | 833, 1486 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2082, 2116 |
| BciT130I | CCWGG | 1 cut(s) | 476 |
| BciVI | GTATCC | 2 cut(s) | 600, 965 |
| BcnI | CCSGG | 1 cut(s) | 2270 |
| BcoDI | GTCTC | 4 cut(s) | 265, 1085, 1911, 1998 |
| BcuI | ACTAGT | 1 cut(s) | 2314 |
| BfaI | CTAG | 7 cut(s) | 30, 371, 950, 1925, 2315, 2501, 2583 |
| BfmI | CTRYAG | 4 cut(s) | 90, 336, 1419, 1443 |
| BfoI | RGCGCY | 1 cut(s) | 1306 |
| BfuAI | ACCTGC | 4 cut(s) | 403, 883, 1787, 2228 |
| BfuI | GTATCC | 2 cut(s) | 600, 965 |
| BglII | AGATCT | 3 cut(s) | 77, 398, 2533 |
| BlpI | GCTNAGC | 1 cut(s) | 1665 |
| Bme1390I | CCNGG | 2 cut(s) | 476, 2270 |
| Bme18I | GGWCC | 3 cut(s) | 790, 1213, 1741 |
| BmgT120I | GGNCC | 3 cut(s) | 790, 1213, 1741 |
| BmiI | GGNNCC | 7 cut(s) | 6, 387, 417, 471, 925, 1742, 2298 |
| BmrFI | CCNGG | 2 cut(s) | 476, 2270 |
| BmrI | ACTGGG | 1 cut(s) | 1673 |
| BmsI | GCATC | 2 cut(s) | 125, 1699 |
| BmtI | GCTAGC | 1 cut(s) | 374 |
| BmuI | ACTGGG | 1 cut(s) | 1673 |
| BpiI | GAAGAC | 3 cut(s) | 1046, 1262, 1943 |
| BpmI | CTGGAG | 2 cut(s) | 497, 770 |
| Bpu10I | CCTNAGC | 3 cut(s) | 960, 1026, 1275 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1665 |
| BpuMI | CCSGG | 1 cut(s) | 2270 |
| Bsa29I | ATCGAT | 1 cut(s) | 2380 |
| BsaAI | YACGTR | 1 cut(s) | 980 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2459, 2496 |
| BsaHI | GRCGYC | 2 cut(s) | 2046, 2308 |
| BsaI | GGTCTC | 1 cut(s) | 1085 |
| BsaJI | CCNNGG | 7 cut(s) | 342, 474, 942, 967, 1209, 1216, 1736 |
| BsaWI | WCCGGW | 1 cut(s) | 2425 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 565, 781, 1196, 1210 |
| Bse118I | RCCGGY | 1 cut(s) | 221 |
| Bse1I | ACTGG | 1 cut(s) | 1679 |
| Bse3DI | GCAATG | 2 cut(s) | 452, 1548 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2459, 2496 |
| BseBI | CCWGG | 1 cut(s) | 476 |
| BseCI | ATCGAT | 1 cut(s) | 2380 |
| BseDI | CCNNGG | 7 cut(s) | 342, 474, 942, 967, 1209, 1216, 1736 |
| BseGI | GGATG | 6 cut(s) | 131, 555, 574, 729, 1606, 2256 |
| BseJI | GATNNNNATC | 2 cut(s) | 2459, 2496 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 565, 781, 1196, 1210 |
| BseMI | GCAATG | 2 cut(s) | 452, 1548 |
| BseMII | CTCAG | 6 cut(s) | 840, 951, 1122, 1266, 1487, 2384 |
| BseNI | ACTGG | 1 cut(s) | 1679 |
| BseRI | GAGGAG | 2 cut(s) | 1292, 1859 |
| BseSI | GKGCMC | 1 cut(s) | 678 |
| BseYI | CCCAGC | 1 cut(s) | 595 |
| BsgI | GTGCAG | 1 cut(s) | 66 |
| Bsh1236I | CGCG | 2 cut(s) | 730, 2173 |
| BshFI | GGCC | 5 cut(s) | 1501, 1735, 1793, 2211, 2388 |
| BshNI | GGYRCC | 4 cut(s) | 385, 415, 469, 923 |
| BshVI | ATCGAT | 1 cut(s) | 2380 |
| BsiHKAI | GWGCWC | 3 cut(s) | 678, 966, 2143 |
| BsiSI | CCGG | 4 cut(s) | 222, 2270, 2389, 2426 |
| BslFI | GGGAC | 6 cut(s) | 644, 758, 1171, 1180, 1732, 1754 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 565, 781, 1196, 1210 |
| BsmAI | GTCTC | 4 cut(s) | 265, 1085, 1911, 1998 |
| BsmBI | CGTCTC | 2 cut(s) | 265, 1911 |
| BsmFI | GGGAC | 6 cut(s) | 644, 758, 1171, 1180, 1732, 1754 |
| BsmI | GAATGC | 1 cut(s) | 1173 |
| BsnI | GGCC | 5 cut(s) | 1501, 1735, 1793, 2211, 2388 |
| Bso31I | GGTCTC | 1 cut(s) | 1085 |
| Bsp1286I | GDGCHC | 4 cut(s) | 678, 966, 1808, 2143 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1665 |
| Bsp19I | CCATGG | 1 cut(s) | 967 |
| BspACI | CCGC | 4 cut(s) | 1794, 2043, 2322, 2467 |
| BspANI | GGCC | 5 cut(s) | 1501, 1735, 1793, 2211, 2388 |
| BspCNI | CTCAG | 6 cut(s) | 841, 952, 1123, 1267, 1488, 2383 |
| BspDI | ATCGAT | 1 cut(s) | 2380 |
| BspFNI | CGCG | 2 cut(s) | 730, 2173 |
| BspHI | TCATGA | 1 cut(s) | 2592 |
| BspLI | GGNNCC | 7 cut(s) | 6, 387, 417, 471, 925, 1742, 2298 |
| BspMAI | CTGCAG | 2 cut(s) | 94, 340 |
| BspMI | ACCTGC | 4 cut(s) | 403, 883, 1787, 2228 |
| BspOI | GCTAGC | 1 cut(s) | 374 |
| BspPI | GGATC | 9 cut(s) | 328, 815, 1534, 1982, 2155, 2291, 2304, 2360, 2562 |
| BspT107I | GGYRCC | 4 cut(s) | 385, 415, 469, 923 |
| BspTNI | GGTCTC | 1 cut(s) | 1085 |
| BsrDI | GCAATG | 2 cut(s) | 452, 1548 |
| BsrFI | RCCGGY | 1 cut(s) | 221 |
| BsrI | ACTGG | 1 cut(s) | 1679 |
| BssAI | RCCGGY | 1 cut(s) | 221 |
| BssECI | CCNNGG | 7 cut(s) | 342, 474, 942, 967, 1209, 1216, 1736 |
| BssNAI | GTATAC | 1 cut(s) | 2542 |
| BssNI | GRCGYC | 2 cut(s) | 2046, 2308 |
| BssT1I | CCWWGG | 5 cut(s) | 342, 942, 967, 1209, 1216 |
| Bst1107I | GTATAC | 1 cut(s) | 2542 |
| Bst2UI | CCWGG | 1 cut(s) | 476 |
| Bst4CI | ACNGT | 6 cut(s) | 549, 762, 794, 1045, 1597, 2260 |
| Bst6I | CTCTTC | 4 cut(s) | 689, 1044, 1083, 1836 |
| BstACI | GRCGYC | 2 cut(s) | 2046, 2308 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 89, 682 |
| BstBAI | YACGTR | 1 cut(s) | 980 |
| BstC8I | GCNNGC | 3 cut(s) | 372, 536, 1555 |
| BstDSI | CCRYGG | 1 cut(s) | 967 |
| BstEII | GGTNACC | 1 cut(s) | 1199 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1194, 1208 |
| BstF5I | GGATG | 6 cut(s) | 131, 555, 574, 729, 1606, 2256 |
| BstFNI | CGCG | 2 cut(s) | 730, 2173 |
| BstH2I | RGCGCY | 1 cut(s) | 1306 |
| BstHHI | GCGC | 2 cut(s) | 1305, 1586 |
| BstMAI | GTCTC | 4 cut(s) | 265, 1085, 1911, 1998 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 32, 80, 89, 682, 1127, 1292, 2052 |
| BstNI | CCWGG | 1 cut(s) | 476 |
| BstNSI | RCATGY | 2 cut(s) | 1430, 2059 |
| BstPI | GGTNACC | 1 cut(s) | 1199 |
| BstSCI | CCNGG | 2 cut(s) | 474, 2268 |
| BstSFI | CTRYAG | 4 cut(s) | 90, 336, 1419, 1443 |
| BstSLI | GKGCMC | 1 cut(s) | 678 |
| BstUI | CGCG | 2 cut(s) | 730, 2173 |
| BstV2I | GAAGAC | 3 cut(s) | 1046, 1262, 1943 |
| BstX2I | RGATCY | 6 cut(s) | 77, 398, 2147, 2296, 2533, 2554 |
| BstYI | RGATCY | 6 cut(s) | 77, 398, 2147, 2296, 2533, 2554 |
| BstZ17I | GTATAC | 1 cut(s) | 2542 |
| Bsu15I | ATCGAT | 1 cut(s) | 2380 |
| BsuI | GTATCC | 2 cut(s) | 600, 965 |
| BsuRI | GGCC | 5 cut(s) | 1501, 1735, 1793, 2211, 2388 |
| BsuTUI | ATCGAT | 1 cut(s) | 2380 |
| BtgI | CCRYGG | 1 cut(s) | 967 |
| BtsCI | GGATG | 6 cut(s) | 131, 555, 574, 729, 1606, 2256 |
| BveI | ACCTGC | 4 cut(s) | 403, 883, 1787, 2228 |
| Cac8I | GCNNGC | 3 cut(s) | 372, 536, 1555 |
| CciI | TCATGA | 1 cut(s) | 2592 |
| CfoI | GCGC | 2 cut(s) | 1305, 1586 |
| Cfr10I | RCCGGY | 1 cut(s) | 221 |
| Cfr13I | GGNCC | 3 cut(s) | 790, 1213, 1741 |
| ClaI | ATCGAT | 1 cut(s) | 2380 |
| CseI | GACGC | 5 cut(s) | 282, 1928, 2035, 2162, 2297 |
| Csp6I | GTAC | 6 cut(s) | 470, 550, 712, 977, 2022, 2470 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2431, 2466 |
| CviQI | GTAC | 6 cut(s) | 470, 550, 712, 977, 2022, 2470 |
| DraIII | CACNNNGTG | 1 cut(s) | 682 |
| EaeI | YGGCCR | 2 cut(s) | 1733, 2386 |
| Eam1104I | CTCTTC | 4 cut(s) | 689, 1044, 1083, 1836 |
| EarI | CTCTTC | 4 cut(s) | 689, 1044, 1083, 1836 |
| EciI | GGCGGA | 1 cut(s) | 2337 |
| Eco130I | CCWWGG | 5 cut(s) | 342, 942, 967, 1209, 1216 |
| Eco24I | GRGCYC | 1 cut(s) | 1808 |
| Eco31I | GGTCTC | 1 cut(s) | 1085 |
| Eco47I | GGWCC | 3 cut(s) | 790, 1213, 1741 |
| Eco47III | AGCGCT | 1 cut(s) | 1304 |
| Eco57I | CTGAAG | 3 cut(s) | 257, 486, 1680 |
| Eco91I | GGTNACC | 1 cut(s) | 1199 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1194, 1208 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1213, 1741 |
| EcoO65I | GGTNACC | 1 cut(s) | 1199 |
| EcoRI | GAATTC | 1 cut(s) | 524 |
| EcoRII | CCWGG | 1 cut(s) | 474 |
| EcoT14I | CCWWGG | 5 cut(s) | 342, 942, 967, 1209, 1216 |
| EcoT22I | ATGCAT | 2 cut(s) | 261, 2017 |
| EcoT38I | GRGCYC | 1 cut(s) | 1808 |
| ErhI | CCWWGG | 5 cut(s) | 342, 942, 967, 1209, 1216 |
| Esp3I | CGTCTC | 2 cut(s) | 265, 1911 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1289, 1321, 1653, 1685 |
| FaqI | GGGAC | 6 cut(s) | 644, 758, 1171, 1180, 1732, 1754 |
| FblI | GTMKAC | 3 cut(s) | 1533, 2311, 2541 |
| FokI | GGATG | 6 cut(s) | 118, 542, 581, 736, 1593, 2263 |
| FriOI | GRGCYC | 1 cut(s) | 1808 |
| FspBI | CTAG | 7 cut(s) | 30, 371, 950, 1925, 2315, 2501, 2583 |
| GlaI | GCGC | 2 cut(s) | 1304, 1585 |
| GsaI | CCCAGC | 1 cut(s) | 599 |
| GsuI | CTGGAG | 2 cut(s) | 497, 770 |
| HaeII | RGCGCY | 1 cut(s) | 1306 |
| HaeIII | GGCC | 5 cut(s) | 1501, 1735, 1793, 2211, 2388 |
| HapII | CCGG | 4 cut(s) | 222, 2270, 2389, 2426 |
| HgaI | GACGC | 5 cut(s) | 282, 1928, 2035, 2162, 2297 |
| HhaI | GCGC | 2 cut(s) | 1305, 1586 |
| Hin1I | GRCGYC | 2 cut(s) | 2046, 2308 |
| Hin6I | GCGC | 2 cut(s) | 1303, 1584 |
| HinP1I | GCGC | 2 cut(s) | 1303, 1584 |
| HincII | GTYRAC | 3 cut(s) | 2256, 2266, 2312 |
| HindII | GTYRAC | 3 cut(s) | 2256, 2266, 2312 |
| HindIII | AAGCTT | 1 cut(s) | 1667 |
| HinfI | GANTC | 8 cut(s) | 288, 767, 779, 845, 1184, 2123, 2377, 2497 |
| HpaI | GTTAAC | 1 cut(s) | 2256 |
| HpaII | CCGG | 4 cut(s) | 222, 2270, 2389, 2426 |
| HphI | GGTGA | 7 cut(s) | 907, 917, 922, 1193, 1847, 1878, 2450 |
| Hpy99I | CGWCG | 2 cut(s) | 2313, 2529 |
| HpyCH4III | ACNGT | 6 cut(s) | 549, 762, 794, 1045, 1597, 2260 |
| HpyCH4IV | ACGT | 2 cut(s) | 979, 2402 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 32, 80, 89, 682, 1127, 1292, 2052 |
| HpySE526I | ACGT | 2 cut(s) | 979, 2402 |
| Hsp92I | GRCGYC | 2 cut(s) | 2046, 2308 |
| HspAI | GCGC | 2 cut(s) | 1303, 1584 |
| KpnI | GGTACC | 1 cut(s) | 473 |
| KspAI | GTTAAC | 1 cut(s) | 2256 |
| LmnI | GCTCC | 5 cut(s) | 10, 1244, 1444, 1465, 2138 |
| LweI | GCATC | 2 cut(s) | 125, 1699 |
| MaeI | CTAG | 7 cut(s) | 30, 371, 950, 1925, 2315, 2501, 2583 |
| MaeII | ACGT | 2 cut(s) | 979, 2402 |
| MaeIII | GTNAC | 6 cut(s) | 64, 250, 910, 1199, 1480, 2438 |
| MflI | RGATCY | 6 cut(s) | 77, 398, 2147, 2296, 2533, 2554 |
| MhlI | GDGCHC | 4 cut(s) | 678, 966, 1808, 2143 |
| MlyI | GAGTC | 2 cut(s) | 1193, 2117 |
| MmeI | TCCRAC | 5 cut(s) | 125, 1217, 1266, 2082, 2183 |
| Mph1103I | ATGCAT | 2 cut(s) | 261, 2017 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2484 |
| MseI | TTAA | 3 cut(s) | 938, 1467, 2255 |
| MslI | CAYNNNNRTG | 5 cut(s) | 514, 567, 1431, 2054, 2060 |
| MspA1I | CMGCKG | 3 cut(s) | 599, 1415, 1832 |
| MspI | CCGG | 4 cut(s) | 222, 2270, 2389, 2426 |
| MspR9I | CCNGG | 2 cut(s) | 476, 2270 |
| Mva1269I | GAATGC | 1 cut(s) | 1173 |
| MvaI | CCWGG | 1 cut(s) | 476 |
| MvnI | CGCG | 2 cut(s) | 730, 2173 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 32, 80, 89, 682, 1127, 1292, 2052 |
| NciI | CCSGG | 1 cut(s) | 2270 |
| NcoI | CCATGG | 1 cut(s) | 967 |
| NheI | GCTAGC | 1 cut(s) | 370 |
| NlaIV | GGNNCC | 7 cut(s) | 6, 387, 417, 471, 925, 1742, 2298 |
| NmeAIII | GCCGAG | 1 cut(s) | 1761 |
| NmuCI | GTSAC | 4 cut(s) | 64, 910, 1199, 2438 |
| NsiI | ATGCAT | 2 cut(s) | 261, 2017 |
| NspI | RCATGY | 2 cut(s) | 1430, 2059 |
| OliI | CACNNNNGTG | 1 cut(s) | 514 |
| PagI | TCATGA | 1 cut(s) | 2592 |
| PaqCI | CACCTGC | 2 cut(s) | 403, 883 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 727, 1926 |
| PctI | GAATGC | 1 cut(s) | 1173 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2484 |
| PfeI | GAWTC | 6 cut(s) | 288, 767, 779, 845, 2377, 2497 |
| PleI | GAGTC | 2 cut(s) | 1192, 2117 |
| PpsI | GAGTC | 2 cut(s) | 1192, 2117 |
| Ppu21I | YACGTR | 1 cut(s) | 980 |
| PpuMI | RGGWCCY | 2 cut(s) | 1213, 1741 |
| Psp5II | RGGWCCY | 2 cut(s) | 1213, 1741 |
| Psp6I | CCWGG | 1 cut(s) | 474 |
| PspEI | GGTNACC | 1 cut(s) | 1199 |
| PspFI | CCCAGC | 1 cut(s) | 595 |
| PspGI | CCWGG | 1 cut(s) | 474 |
| PspN4I | GGNNCC | 7 cut(s) | 6, 387, 417, 471, 925, 1742, 2298 |
| PspPI | GGNCC | 3 cut(s) | 790, 1213, 1741 |
| PspPPI | RGGWCCY | 2 cut(s) | 1213, 1741 |
| PstI | CTGCAG | 2 cut(s) | 94, 340 |
| PsuI | RGATCY | 6 cut(s) | 77, 398, 2147, 2296, 2533, 2554 |
| PvuII | CAGCTG | 3 cut(s) | 599, 1415, 1832 |
| RsaI | GTAC | 6 cut(s) | 471, 551, 713, 978, 2023, 2471 |
| RsaNI | GTAC | 6 cut(s) | 470, 550, 712, 977, 2022, 2470 |
| RseI | CAYNNNNRTG | 5 cut(s) | 514, 567, 1431, 2054, 2060 |
| SalI | GTCGAC | 1 cut(s) | 2310 |
| SaqAI | TTAA | 3 cut(s) | 938, 1467, 2255 |
| Sau96I | GGNCC | 3 cut(s) | 790, 1213, 1741 |
| SchI | GAGTC | 2 cut(s) | 1193, 2117 |
| ScrFI | CCNGG | 2 cut(s) | 476, 2270 |
| SduI | GDGCHC | 4 cut(s) | 678, 966, 1808, 2143 |
| SfaNI | GCATC | 2 cut(s) | 125, 1699 |
| SfcI | CTRYAG | 4 cut(s) | 90, 336, 1419, 1443 |
| SinI | GGWCC | 3 cut(s) | 790, 1213, 1741 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 514, 567, 1431, 2054, 2060 |
| SpeI | ACTAGT | 1 cut(s) | 2314 |
| SsiI | CCGC | 4 cut(s) | 1794, 2043, 2322, 2467 |
| SspI | AATATT | 2 cut(s) | 46, 1540 |
| SspMI | CTAG | 7 cut(s) | 30, 371, 950, 1925, 2315, 2501, 2583 |
| StyD4I | CCNGG | 2 cut(s) | 474, 2268 |
| StyI | CCWWGG | 5 cut(s) | 342, 942, 967, 1209, 1216 |
| TaaI | ACNGT | 6 cut(s) | 549, 762, 794, 1045, 1597, 2260 |
| TaiI | ACGT | 2 cut(s) | 982, 2405 |
| TaqI | TCGA | 5 cut(s) | 110, 1637, 1808, 2311, 2380 |
| TaqII | GACCGA | 1 cut(s) | 1109 |
| TatI | WGTACW | 1 cut(s) | 549 |
| TauI | GCSGC | 2 cut(s) | 1796, 2046 |
| TfiI | GAWTC | 6 cut(s) | 288, 767, 779, 845, 2377, 2497 |
| Tru1I | TTAA | 3 cut(s) | 938, 1467, 2255 |
| Tru9I | TTAA | 3 cut(s) | 938, 1467, 2255 |
| TseFI | GTSAC | 4 cut(s) | 64, 910, 1199, 2438 |
| Tsp45I | GTSAC | 4 cut(s) | 64, 910, 1199, 2438 |
| TspGWI | ACGGA | 2 cut(s) | 391, 2177 |
| VneI | GTGCAC | 1 cut(s) | 674 |
| VpaK11BI | GGWCC | 3 cut(s) | 790, 1213, 1741 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1194, 1208 |
| XapI | RAATTY | 6 cut(s) | 524, 662, 1076, 2214, 2358, 2504 |
| XbaI | TCTAGA | 2 cut(s) | 29, 2500 |
| XceI | RCATGY | 2 cut(s) | 1430, 2059 |
| XmiI | GTMKAC | 3 cut(s) | 1533, 2311, 2541 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2484 |
| XspI | CTAG | 7 cut(s) | 30, 371, 950, 1925, 2315, 2501, 2583 |
| Zsp2I | ATGCAT | 2 cut(s) | 261, 2017 |