FvH4_1g16860

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000413
Physical Location & Seq
Reverse (-)
9758457 .. 9760865
2409 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g16860.t1

Sequence Viewer

Length: 2409 bp
ATGCTTCTTGTTTTTCTCCTCCACTTCTCAAACCTTCACATTCTCTCTTTTGCTGATGACTACAAAATCAATTGTGGCTCAGATGCTAATGTGAGCCTCATTGCTGACCAGAATTTTGTTGGAGAATCAAAGTCTGGTTCCTCTTTCTCCAAAAGCAACACCATCGCACACACAAACCAGTTGCCGGCTCTCTACCAGACAGCAAGAGTTTATAGTGATCCTTTCTACTATGAGTTCAAGGTCACTACTGGTACTTATCTGGTACGCCTACATTTCTTAGCCTTTTCTTCCACCTCAAGTAATCTCTCTGCAGCTGTTTTTGATGTTTTGGATTCTACAAAATTCATACTGCTGAACAATTTCAGTGCCAAAAGTAGTACTAGTTCTCCTTTGATAAAGGAGTTCTTTCTAAGAATTGATAGTACCGAGTCATTTAGACTGTATTTTACACCCCGGGCATCATCTTTGGCTTTTGTCAATGCTATTGAATTCTTCGCCGTCCCTCCAGATTTCACCAACTTCATCCCTGAGAATTTCACCAGTAATAATAGCCCTTTACAGACAATTTACAGAGTGAATGTTGGGGGACCTTTAAACAATGATACATTGTGGAGAAGCTGGGAAACAGATGACACTTACCTGCTTGATCCAAACTCTGCTAAGGAAAGCAAAAAAGGTACACTTAGTAGAGATCATGTGGGAGAAATTAATGGTTTCGTTTTGTCTAATAAGTATGTCGCGCCAGATGGGGTTTACCTGACTGCTAAGGCGATGAATATTACTGCTAGCAGGCCAGCCAATTCCTCCAACATAACTTGGTCTTTAAAAGTGAGTGGGAATGCTAGGCACATTGTCCGGGCTCATTTCTGTGACATTGTTGGTTTGGCGACTGGTAACATTCTTTTTGACTTGTATTCAAACAGCAACTTCCGCAAGGAGATTGGCTGGATTGATCTATCTGTTCCTTTCTACTATGACTTTGTGGTGAATTCTAGTGCGTCTGAACTCATTAACATCAGCATAAGACCTAGAAATGATTCTGTGGAAAAAAATGCATTTCTAAATGGGCTAGAAATATTGGAGATAATGGAGGGAAAAGGTTCAATTCCTCATGTGAAAGTGCCCATGAAGAATATTGTGGCTGTGGTGGTTGGTTCAGTTCTTGGAGGCCTATTTCTCATCTGCATTGTAATAGCTGGATTTGTGTTCCGTTTGAGACACAGAAAGAAAGAGAAAGGAGTTGAAACTTCAGTTTGGTCACCAATGCCTGCAAATGGAGGAGGGAGTTCTCACAGCTCTGCTTTCAATCTAAATTATCTTGGTTTGAAGATATCTTTTACTGAAATCCAGTCTGCAACAAACAACTTTGACACGAAGTTGGTGATAGGCAAGGGTGGCTTTGGTAATGTTTATAGAGGGACTCCCTTGAATGGCACAAAAGTGGCTGTGAAGAGAGCTTATAAGCGAGATGAGGAAGGTTCAAGCTCAGGCCAAGGCCTCTCAGAATTCGAAACTGAAATCATAGTATTGTCGAAAATCCGCCACCGCCATCTTGTCTCCTTGATTGGCTACTGTAATGAAGGGTCTGAAATGATTCTAGTGTACGAGTTCATGGAGAAAGGTACCCTGAGAGATCATTTGTATAATTCTGACGTCCCTCGCTTGTCATGGGAGCAAAGACTTGAAATTTGTACTGGAGCAGCAAGGGGTCTTCATTATCTCCACACAGGCGCAGCTGGGGGAATCATTCACAGAGATGTCAAGTCCTCCAACATATTGCTTGATCAGAACCATGTTGCCAAAGTTGCTGACTTTGGCCTTTCGAAGTCTGGAGCTCTCAATGAAACGCATGTCAGCACTAATGTTAAAGGCACTTTTGGTTATCTTGACCCCGAGTACATGATGTCGCAACAGTTGACAGAAAAATCTGATGTTTATTCATTTGGTGTAGTTCTACTCGAAGTGTTGTGTGCAAGACCAGCTATTGATTCAATGCTTCCAAGAGAGCAAATGAATTTGGCTGAATGGGGAATGTTTTACCAGAAAAGAGGGCTGCTTGAACAGATTGTTGATTCTGCACTAAAGGGTCATATTGATCCTAGCTCACTGCGGAAGTTTGGTGAGACGGTTGAGAAGTGTTTGCAAGAAGATGCTTCTGATAGGCCAACAATGGCTGATGTGCTGTGGGATTTGGAATATGCATTACGGCTTCAGCAAACAACAAAGCTCAGAGAGGCTCATGAGGATAGCACAACCATTGATGCTTCATCAGCAGCATTCGGTTTGCCAAATGTTCAGCGTATTCATTCACTTGGTTCCACAATGAATGGAGATGATATCAGGGAAGACAACTTGGACACAACAGAAAGTGAAATTTTCTCCCAACTGAAAATTCGTGATGCTAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

803

Amino Acids

89.05

Weight (kDa)

6.12

Isoelectric Point (pI)

36.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 21 - 110 6e-07 Malectin domain
Malectin_like PF12819 23 - 361 1.2e-20 Malectin-like domain
Pkinase PF00069 459 - 728 1.9e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 460 - 729 7.3e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000413)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23200
fragaria_vesca FvH4_1g16860 FvH4_1g16861
malus_domestica MD02G1018900.v1.1 MD15G1289500.v1.1 MD15G1289600.v1.1 MD15G1289700.v1.1
prunus_persica Prupe.6G227800_v2.0.a1 Prupe.6G228000_v2.0.a1 Prupe.6G228100_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228300_v2.0.a1
pyrus_communis pycom02g01680 pycom02g01690 pycom15g25310 pycom15g25330 pycom15g25340
rosa_chinensis RchiOBHm_Chr1g0324321 RchiOBHm_Chr1g0324331 RchiOBHm_Chr1g0324341 RchiOBHm_Chr1g0324401 RchiOBHm_Chr1g0324441 RchiOBHm_Chr2g0106751 RchiOBHm_Chr2g0106761 RchiOBHm_Chr2g0106771 RchiOBHm_Chr2g0106781 RchiOBHm_Chr2g0106801 RchiOBHm_Chr2g0106811 RchiOBHm_Chr2g0106821
rosa_laevigata RLG00000017539 RLG00000017540 RLG00000017541 RLG00000030200 RLG00000030201
rosa_multiflora Rmu_sc0000751.1_g000001 Rmu_sc0000751.1_g000002 Rmu_sc0000751.1_g000003 Rmu_sc0000751.1_g000005 Rmu_sc0000751.1_g000007 Rmu_sc0000751.1_g000008 Rmu_sc0000751.1_g000018 Rmu_sc0000751.1_g000019 Rmu_sc0000751.1_g000026 Rmu_sc0000751.1_g000027 Rmu_sc0000751.1_g000028 Rmu_sc0000751.1_g000029 Rmu_sc0003410.1_g000012 Rmu_sc0004000.1_g000023 Rmu_sc0004000.1_g000024 Rmu_sc0004082.1_g000015 Rmu_sc0004082.1_g000017 Rmu_sc0026507.1_g000001 Rmu_sc0031196.1_g000001 Rmu_sc0039591.1_g000001
rosa_roxburghii Rroxscaffold_159G00432710 Rroxscaffold_159G00432780 Rroxscaffold_159G00432840 Rroxscaffold_159G00433010 Rroxscaffold_2G00098070 Rroxscaffold_2G00136770 Rroxscaffold_4G00325540 Rroxscaffold_4G00325630 Rroxscaffold_4G00325680
rosa_rugosa Rorug01G0045700 Rorug02G0138500 Rorug02G0138600 Rorug02G0138700 Rorug02G0138800 Rorug02G0138900
rosa_samantha Rh1AG061400 Rh1BG052300 Rh1CG063400 Rh1CG063700 Rh1DG067800 Rh2AG189400 Rh2AG189800 Rh2AG190000 Rh2AG190100 Rh2BG201100 Rh2BG201300 Rh2CG194500 Rh2CG194600 Rh2CG194700 Rh2DG195700 Rh2DG195900 Rh2DG196300 Rh2DG196400 Rh2DG196500 Rh2DG196600
rosa_wichuraiana Rw1G004230 Rw1G005210 Rw2G014900 Rw2G014910 Rw2G014930 Rw2G014940 Rw2G014950 Rw2G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1461
AatII GACGTC 1 cut(s) 1656
Acc36I ACCTGC 1 cut(s) 648
Acc65I GGTACC 1 cut(s) 1622
AccB1I GGYRCC 1 cut(s) 1622
AccII CGCG 1 cut(s) 740
AciI CCGC 4 cut(s) 931, 1540, 1546, 2110
AclWI GGATC 3 cut(s) 212, 641, 2090
AcuI CTGAAG 2 cut(s) 1233, 2195
AcyI GRCGYC 1 cut(s) 1653
AfaI GTAC 9 cut(s) 253, 264, 379, 424, 679, 1604, 1624, 1693, 1898
AfiI CCNNNNNNNGG 3 cut(s) 184, 1274, 1430
AhlI ACTAGT 1 cut(s) 380
AjuI GAANNNNNNNTTGG 2 cut(s) 2376, 2408
AleI CACNNNNGTG 1 cut(s) 1439
Alw21I GWGCWC 1 cut(s) 1837
Alw26I GTCTC 3 cut(s) 1210, 1561, 2117
AlwI GGATC 3 cut(s) 212, 641, 2090
Ama87I CYCGRG 2 cut(s) 453, 1892
AoxI GGCC 6 cut(s) 791, 1168, 1489, 1495, 1816, 2162
ApeKI GCWGC 5 cut(s) 311, 1700, 1733, 2053, 2273
ArsI GACNNNNNNTTYG 4 cut(s) 98, 130, 1671, 1703
AseI ATTAAT 1 cut(s) 708
Asp700I GAANNNNTTC 4 cut(s) 359, 1036, 1099, 1593
Asp718I GGTACC 1 cut(s) 1622
AspLEI GCGC 2 cut(s) 742, 1733
AspS9I GGNCC 1 cut(s) 587
AsuC2I CCSGG 3 cut(s) 454, 455, 857
AsuHPI GGTGA 6 cut(s) 505, 529, 997, 1251, 1393, 2132
AsuII TTCGAA 2 cut(s) 1509, 1823
AsuNHI GCTAGC 1 cut(s) 785
AvaI CYCGRG 2 cut(s) 453, 1892
AvaII GGWCC 1 cut(s) 587
BaeGI GKGCMC 1 cut(s) 1125
BanI GGYRCC 1 cut(s) 1622
BanII GRGCYC 2 cut(s) 862, 1837
BbsI GAAGAC 2 cut(s) 1703, 2352
Bbv12I GWGCWC 1 cut(s) 1837
BbvI GCAGC 5 cut(s) 323, 1712, 1745, 2040, 2285
BccI CCATC 3 cut(s) 170, 740, 1557
BceAI ACGGC 2 cut(s) 482, 2222
BcgI CGANNNNNNTGC 2 cut(s) 145, 179
BclI TGATCA 1 cut(s) 1783
BcnI CCSGG 3 cut(s) 454, 455, 857
BcoDI GTCTC 3 cut(s) 1210, 1561, 2117
BcuI ACTAGT 1 cut(s) 380
BfaI CTAG 9 cut(s) 381, 786, 843, 993, 1029, 1070, 1598, 2100, 2403
BfmI CTRYAG 1 cut(s) 309
BfuAI ACCTGC 1 cut(s) 648
BisI GCNGC 5 cut(s) 312, 1701, 1734, 2054, 2274
BlsI GCNGC 5 cut(s) 313, 1702, 1735, 2055, 2275
BmcAI AGTACT 1 cut(s) 379
Bme1390I CCNGG 3 cut(s) 454, 455, 857
Bme18I GGWCC 1 cut(s) 587
BmeT110I CYCGRG 2 cut(s) 453, 1892
BmgT120I GGNCC 1 cut(s) 587
BmiI GGNNCC 4 cut(s) 139, 588, 1624, 2317
BmrFI CCNGG 3 cut(s) 454, 455, 857
BmsI GCATC 5 cut(s) 73, 467, 2140, 2251, 2389
BmtI GCTAGC 1 cut(s) 789
BpiI GAAGAC 2 cut(s) 1703, 2352
BpmI CTGGAG 3 cut(s) 489, 1716, 1851
Bpu10I CCTNAGC 3 cut(s) 660, 765, 1486
Bpu14I TTCGAA 2 cut(s) 1509, 1823
BpuEI CTTGAG 1 cut(s) 280
BpuMI CCSGG 3 cut(s) 454, 455, 857
BsaHI GRCGYC 1 cut(s) 1653
BsaJI CCNNGG 3 cut(s) 452, 453, 1492
BsaXI ACNNNNNCTCC 2 cut(s) 370, 400
Bsc4I CCNNNNNNNGG 3 cut(s) 184, 1274, 1430
Bse118I RCCGGY 1 cut(s) 184
Bse1I ACTGG 6 cut(s) 178, 253, 540, 895, 1348, 1699
Bse3DI GCAATG 1 cut(s) 99
BseDI CCNNGG 3 cut(s) 452, 453, 1492
BseGI GGATG 1 cut(s) 522
BseLI CCNNNNNNNGG 3 cut(s) 184, 1274, 1430
BseMI GCAATG 1 cut(s) 99
BseMII CTCAG 6 cut(s) 93, 519, 1500, 1515, 1619, 2242
BseNI ACTGG 6 cut(s) 178, 253, 540, 895, 1348, 1699
BseRI GAGGAG 2 cut(s) 8, 1293
BseSI GKGCMC 1 cut(s) 1125
BseXI GCAGC 5 cut(s) 323, 1712, 1745, 2040, 2285
BseYI CCCAGC 2 cut(s) 618, 1736
BsgI GTGCAG 1 cut(s) 2061
Bsh1236I CGCG 1 cut(s) 740
BshFI GGCC 6 cut(s) 793, 1170, 1491, 1497, 1818, 2164
BshNI GGYRCC 1 cut(s) 1622
BsiHKAI GWGCWC 1 cut(s) 1837
BsiHKCI CYCGRG 2 cut(s) 453, 1892
BsiSI CCGG 3 cut(s) 185, 454, 856
BslFI GGGAC 4 cut(s) 485, 600, 1432, 1640
BslI CCNNNNNNNGG 3 cut(s) 184, 1274, 1430
BsmAI GTCTC 3 cut(s) 1210, 1561, 2117
BsmBI CGTCTC 1 cut(s) 2117
BsmFI GGGAC 4 cut(s) 485, 600, 1432, 1640
BsmI GAATGC 2 cut(s) 844, 2276
BsnI GGCC 6 cut(s) 793, 1170, 1491, 1497, 1818, 2164
BsoBI CYCGRG 2 cut(s) 453, 1892
Bsp119I TTCGAA 2 cut(s) 1509, 1823
Bsp1286I GDGCHC 3 cut(s) 862, 1125, 1837
Bsp143I GATC 7 cut(s) 217, 646, 691, 952, 1633, 1783, 2095
BspACI CCGC 4 cut(s) 931, 1540, 1546, 2110
BspANI GGCC 6 cut(s) 793, 1170, 1491, 1497, 1818, 2164
BspCNI CTCAG 6 cut(s) 92, 520, 1499, 1514, 1620, 2241
BspFNI CGCG 1 cut(s) 740
BspHI TCATGA 1 cut(s) 2239
BspLI GGNNCC 4 cut(s) 139, 588, 1624, 2317
BspMAI CTGCAG 1 cut(s) 313
BspMI ACCTGC 1 cut(s) 648
BspOI GCTAGC 1 cut(s) 789
BspPI GGATC 3 cut(s) 212, 641, 2090
BspT104I TTCGAA 2 cut(s) 1509, 1823
BspT107I GGYRCC 1 cut(s) 1622
BsrDI GCAATG 1 cut(s) 99
BsrFI RCCGGY 1 cut(s) 184
BsrI ACTGG 6 cut(s) 178, 253, 540, 895, 1348, 1699
BssAI RCCGGY 1 cut(s) 184
BssECI CCNNGG 3 cut(s) 452, 453, 1492
BssMI GATC 7 cut(s) 217, 646, 691, 952, 1633, 1783, 2095
BssNI GRCGYC 1 cut(s) 1653
BssT1I CCWWGG 1 cut(s) 1492
Bst4CI ACNGT 4 cut(s) 441, 1574, 1914, 2128
Bst6I CTCTTC 1 cut(s) 1445
BstACI GRCGYC 1 cut(s) 1653
BstBI TTCGAA 2 cut(s) 1509, 1823
BstC8I GCNNGC 5 cut(s) 186, 787, 791, 795, 1269
BstEII GGTNACC 1 cut(s) 1257
BstF5I GGATG 1 cut(s) 522
BstFNI CGCG 1 cut(s) 740
BstHHI GCGC 2 cut(s) 742, 1733
BstKTI GATC 7 cut(s) 220, 649, 694, 955, 1636, 1786, 2098
BstMAI GTCTC 3 cut(s) 1210, 1561, 2117
BstMBI GATC 7 cut(s) 217, 646, 691, 952, 1633, 1783, 2095
BstMWI GCNNNNNNNGC 5 cut(s) 930, 1395, 1805, 1979, 2270
BstNSI RCATGY 1 cut(s) 1853
BstPI GGTNACC 1 cut(s) 1257
BstSCI CCNGG 3 cut(s) 452, 453, 855
BstSFI CTRYAG 1 cut(s) 309
BstSLI GKGCMC 1 cut(s) 1125
BstUI CGCG 1 cut(s) 740
BstV1I GCAGC 5 cut(s) 323, 1712, 1745, 2040, 2285
BstV2I GAAGAC 2 cut(s) 1703, 2352
BsuRI GGCC 6 cut(s) 793, 1170, 1491, 1497, 1818, 2164
BtgZI GCGATG 2 cut(s) 148, 785
BtsCI GGATG 1 cut(s) 522
BtsI GCAGTG 1 cut(s) 2105
BtsIMutI CAGTG 2 cut(s) 370, 2105
BveI ACCTGC 1 cut(s) 648
Cac8I GCNNGC 5 cut(s) 186, 787, 791, 795, 1269
CciI TCATGA 1 cut(s) 2239
CfoI GCGC 2 cut(s) 742, 1733
Cfr10I RCCGGY 1 cut(s) 184
Cfr13I GGNCC 1 cut(s) 587
Cfr9I CCCGGG 1 cut(s) 453
CseI GACGC 1 cut(s) 987
Csp6I GTAC 9 cut(s) 252, 263, 378, 423, 678, 1603, 1623, 1692, 1897
CviAII CATG 9 cut(s) 695, 1112, 1126, 1612, 1668, 1793, 1850, 1900, 2240
CviQI GTAC 9 cut(s) 252, 263, 378, 423, 678, 1603, 1623, 1692, 1897
DpnI GATC 7 cut(s) 219, 648, 693, 954, 1635, 1785, 2097
DpnII GATC 7 cut(s) 217, 646, 691, 952, 1633, 1783, 2095
DraI TTTAAA 2 cut(s) 594, 825
Eam1104I CTCTTC 1 cut(s) 1445
EarI CTCTTC 1 cut(s) 1445
EciI GGCGGA 1 cut(s) 1529
Ecl136II GAGCTC 1 cut(s) 1835
Eco130I CCWWGG 1 cut(s) 1492
Eco147I AGGCCT 2 cut(s) 1170, 1497
Eco24I GRGCYC 2 cut(s) 862, 1837
Eco32I GATATC 2 cut(s) 1332, 2338
Eco47I GGWCC 1 cut(s) 587
Eco53kI GAGCTC 1 cut(s) 1835
Eco57I CTGAAG 2 cut(s) 1233, 2195
Eco88I CYCGRG 2 cut(s) 453, 1892
Eco91I GGTNACC 1 cut(s) 1257
EcoICRI GAGCTC 1 cut(s) 1835
EcoO109I RGGNCCY 1 cut(s) 587
EcoO65I GGTNACC 1 cut(s) 1257
EcoRI GAATTC 3 cut(s) 488, 988, 1505
EcoRV GATATC 2 cut(s) 1332, 2338
EcoT14I CCWWGG 1 cut(s) 1492
EcoT22I ATGCAT 2 cut(s) 1057, 2203
EcoT38I GRGCYC 2 cut(s) 862, 1837
ErhI CCWWGG 1 cut(s) 1492
Esp3I CGTCTC 1 cut(s) 2117
FaeI CATG 9 cut(s) 698, 1115, 1129, 1615, 1671, 1796, 1853, 1903, 2243
FalI AAGNNNNNCTT 6 cut(s) 389, 421, 666, 698, 1382, 1414
FaqI GGGAC 4 cut(s) 485, 600, 1432, 1640
FatI CATG 9 cut(s) 694, 1111, 1125, 1611, 1667, 1792, 1849, 1899, 2239
FbaI TGATCA 1 cut(s) 1783
Fnu4HI GCNGC 5 cut(s) 312, 1701, 1734, 2054, 2274
FokI GGATG 1 cut(s) 509
FriOI GRGCYC 2 cut(s) 862, 1837
Fsp4HI GCNGC 5 cut(s) 312, 1701, 1734, 2054, 2274
FspBI CTAG 9 cut(s) 381, 786, 843, 993, 1029, 1070, 1598, 2100, 2403
GlaI GCGC 2 cut(s) 741, 1732
GluI GCNGC 5 cut(s) 312, 1701, 1734, 2054, 2274
GsaI CCCAGC 2 cut(s) 622, 1740
GsuI CTGGAG 3 cut(s) 489, 1716, 1851
HaeIII GGCC 6 cut(s) 793, 1170, 1491, 1497, 1818, 2164
HapII CCGG 3 cut(s) 185, 454, 856
HgaI GACGC 1 cut(s) 987
HhaI GCGC 2 cut(s) 742, 1733
Hin1I GRCGYC 1 cut(s) 1653
Hin1II CATG 9 cut(s) 698, 1115, 1129, 1615, 1671, 1796, 1853, 1903, 2243
Hin6I GCGC 2 cut(s) 740, 1731
HinP1I GCGC 2 cut(s) 740, 1731
HincII GTYRAC 1 cut(s) 1917
HindII GTYRAC 1 cut(s) 1917
HinfI GANTC 9 cut(s) 125, 332, 428, 1037, 1420, 1594, 1743, 1988, 2072
HpaII CCGG 3 cut(s) 185, 454, 856
HphI GGTGA 6 cut(s) 505, 529, 997, 1251, 1393, 2132
Hpy166II GTNNAC 4 cut(s) 680, 754, 1603, 1917
Hpy188I TCNGA 9 cut(s) 82, 1003, 1504, 1588, 1651, 1788, 1930, 2158, 2231
Hpy188III TCNNGA 5 cut(s) 506, 1830, 1886, 2240, 2396
Hpy8I GTNNAC 4 cut(s) 680, 754, 1603, 1917
HpyAV CCTTC 3 cut(s) 44, 1469, 1574
HpyCH4III ACNGT 4 cut(s) 441, 1574, 1914, 2128
HpyCH4IV ACGT 1 cut(s) 1653
HpyCH4V TGCA 9 cut(s) 311, 1055, 1185, 1271, 1355, 1973, 2078, 2143, 2201
HpyF10VI GCNNNNNNNGC 5 cut(s) 930, 1395, 1805, 1979, 2270
HpySE526I ACGT 1 cut(s) 1653
Hsp92I GRCGYC 1 cut(s) 1653
Hsp92II CATG 9 cut(s) 698, 1115, 1129, 1615, 1671, 1796, 1853, 1903, 2243
HspAI GCGC 2 cut(s) 740, 1731
KpnI GGTACC 1 cut(s) 1626
KroI GCCGGC 1 cut(s) 184
KroNI GCCGGC 1 cut(s) 186
Ksp22I TGATCA 1 cut(s) 1783
Kzo9I GATC 7 cut(s) 217, 646, 691, 952, 1633, 1783, 2095
LmnI GCTCC 3 cut(s) 1672, 1697, 1832
Lsp1109I GCAGC 5 cut(s) 323, 1712, 1745, 2040, 2285
LweI GCATC 5 cut(s) 73, 467, 2140, 2251, 2389
MaeI CTAG 9 cut(s) 381, 786, 843, 993, 1029, 1070, 1598, 2100, 2403
MaeII ACGT 1 cut(s) 1653
MaeIII GTNAC 4 cut(s) 241, 869, 893, 1257
MalI GATC 7 cut(s) 219, 648, 693, 954, 1635, 1785, 2097
MboI GATC 7 cut(s) 217, 646, 691, 952, 1633, 1783, 2095
MboII GAAGA 8 cut(s) 279, 484, 1141, 1339, 1462, 1703, 2159, 2357
MfeI CAATTG 1 cut(s) 70
MhlI GDGCHC 3 cut(s) 862, 1125, 1837
MlyI GAGTC 2 cut(s) 437, 1414
MmeI TCCRAC 3 cut(s) 100, 831, 1794
Mph1103I ATGCAT 2 cut(s) 1057, 2203
MroNI GCCGGC 1 cut(s) 184
MroXI GAANNNNTTC 4 cut(s) 359, 1036, 1099, 1593
MseI TTAA 5 cut(s) 593, 708, 824, 1011, 1866
MslI CAYNNNNRTG 3 cut(s) 867, 1439, 1755
MspA1I CMGCKG 2 cut(s) 314, 1736
MspI CCGG 3 cut(s) 185, 454, 856
MspR9I CCNGG 3 cut(s) 454, 455, 857
MunI CAATTG 1 cut(s) 70
Mva1269I GAATGC 2 cut(s) 844, 2276
MvnI CGCG 1 cut(s) 740
MwoI GCNNNNNNNGC 5 cut(s) 930, 1395, 1805, 1979, 2270
NaeI GCCGGC 1 cut(s) 186
NciI CCSGG 3 cut(s) 454, 455, 857
NdeII GATC 7 cut(s) 217, 646, 691, 952, 1633, 1783, 2095
NgoMIV GCCGGC 1 cut(s) 184
NheI GCTAGC 1 cut(s) 785
NlaIII CATG 9 cut(s) 698, 1115, 1129, 1615, 1671, 1796, 1853, 1903, 2243
NlaIV GGNNCC 4 cut(s) 139, 588, 1624, 2317
NmuCI GTSAC 3 cut(s) 241, 869, 1257
NsiI ATGCAT 2 cut(s) 1057, 2203
NspI RCATGY 1 cut(s) 1853
NspV TTCGAA 2 cut(s) 1509, 1823
OliI CACNNNNGTG 1 cut(s) 1439
PagI TCATGA 1 cut(s) 2239
PceI AGGCCT 2 cut(s) 1170, 1497
PctI GAATGC 2 cut(s) 844, 2276
PdiI GCCGGC 1 cut(s) 186
PdmI GAANNNNTTC 4 cut(s) 359, 1036, 1099, 1593
PfeI GAWTC 7 cut(s) 125, 332, 1037, 1594, 1743, 1988, 2072
PkrI GCNGC 5 cut(s) 313, 1702, 1735, 2055, 2275
PleI GAGTC 2 cut(s) 436, 1414
PpsI GAGTC 2 cut(s) 436, 1414
PpuMI RGGWCCY 1 cut(s) 587
PshBI ATTAAT 1 cut(s) 708
PsiI TTATAA 1 cut(s) 1461
Psp124BI GAGCTC 1 cut(s) 1837
Psp5II RGGWCCY 1 cut(s) 587
PspEI GGTNACC 1 cut(s) 1257
PspFI CCCAGC 2 cut(s) 618, 1736
PspN4I GGNNCC 4 cut(s) 139, 588, 1624, 2317
PspPI GGNCC 1 cut(s) 587
PspPPI RGGWCCY 1 cut(s) 587
PsrI GAACNNNNNNTAC 2 cut(s) 367, 399
PstI CTGCAG 1 cut(s) 313
PvuII CAGCTG 2 cut(s) 314, 1736
RsaI GTAC 9 cut(s) 253, 264, 379, 424, 679, 1604, 1624, 1693, 1898
RsaNI GTAC 9 cut(s) 252, 263, 378, 423, 678, 1603, 1623, 1692, 1897
RseI CAYNNNNRTG 3 cut(s) 867, 1439, 1755
SacI GAGCTC 1 cut(s) 1837
SaqAI TTAA 5 cut(s) 593, 708, 824, 1011, 1866
SatI GCNGC 5 cut(s) 312, 1701, 1734, 2054, 2274
Sau3AI GATC 7 cut(s) 217, 646, 691, 952, 1633, 1783, 2095
Sau96I GGNCC 1 cut(s) 587
ScaI AGTACT 1 cut(s) 379
SchI GAGTC 2 cut(s) 437, 1414
ScrFI CCNGG 3 cut(s) 454, 455, 857
SduI GDGCHC 3 cut(s) 862, 1125, 1837
SfaNI GCATC 5 cut(s) 73, 467, 2140, 2251, 2389
SfcI CTRYAG 1 cut(s) 309
SfuI TTCGAA 2 cut(s) 1509, 1823
SinI GGWCC 1 cut(s) 587
SmaI CCCGGG 1 cut(s) 455
SmiMI CAYNNNNRTG 3 cut(s) 867, 1439, 1755
SmlI CTYRAG 1 cut(s) 295
SmoI CTYRAG 1 cut(s) 295
SpeI ACTAGT 1 cut(s) 380
SseBI AGGCCT 2 cut(s) 1170, 1497
SsiI CCGC 4 cut(s) 931, 1540, 1546, 2110
SspI AATATT 3 cut(s) 778, 1077, 1135
SspMI CTAG 9 cut(s) 381, 786, 843, 993, 1029, 1070, 1598, 2100, 2403
SstI GAGCTC 1 cut(s) 1837
StuI AGGCCT 2 cut(s) 1170, 1497
StyD4I CCNGG 3 cut(s) 452, 453, 855
StyI CCWWGG 1 cut(s) 1492
TaaI ACNGT 4 cut(s) 441, 1574, 1914, 2128
TaiI ACGT 1 cut(s) 1656
TaqI TCGA 4 cut(s) 1509, 1532, 1823, 1959
TatI WGTACW 3 cut(s) 377, 1691, 1896
TfiI GAWTC 7 cut(s) 125, 332, 1037, 1594, 1743, 1988, 2072
Tru1I TTAA 5 cut(s) 593, 708, 824, 1011, 1866
Tru9I TTAA 5 cut(s) 593, 708, 824, 1011, 1866
TscAI CASTG 2 cut(s) 370, 2112
TseFI GTSAC 3 cut(s) 241, 869, 1257
TseI GCWGC 5 cut(s) 311, 1700, 1733, 2053, 2273
Tsp45I GTSAC 3 cut(s) 241, 869, 1257
TspGWI ACGGA 1 cut(s) 1199
TspMI CCCGGG 1 cut(s) 453
TspRI CASTG 2 cut(s) 370, 2112
VpaK11BI GGWCC 1 cut(s) 587
VspI ATTAAT 1 cut(s) 708
XceI RCATGY 1 cut(s) 1853
XcmI CCANNNNNNNNNTGG 1 cut(s) 116
XmaI CCCGGG 1 cut(s) 453
XmnI GAANNNNTTC 4 cut(s) 359, 1036, 1099, 1593
XspI CTAG 9 cut(s) 381, 786, 843, 993, 1029, 1070, 1598, 2100, 2403
ZraI GACGTC 1 cut(s) 1654
ZrmI AGTACT 1 cut(s) 379
Zsp2I ATGCAT 2 cut(s) 1057, 2203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.