Rroxscaffold_4G00325540

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000413
Physical Location & Seq
Reverse (-)
57275162 .. 57277606
2445 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00325540.1

Sequence Viewer

Length: 2286 bp
ATGGAACATCTTCGTATCCCATTACTCTCTCTGCTTGTTTTTCTCCTCAACCTCTCATCCCTTCACTTTCTCTCTTTAGCTGATGATTATTTCATCAACTGTGGTTCACATGATAATGTGAGCCTCATTCCTGGCCAGAATTTCTCTGGGGAATCAAAGCCTGCAGGTTACACTTTCTCCAAAAGCAAGGCTGTCAAAGACATCAACCAGTTACCAGATATATCACCTCTATATAAGACAGCAAGAAGGTTCAATGAACCATTCTACTACCAGTTCAGCATCACTGAAGATGGTACTTATCTGGTACGCTTACATTTCTCAGCTTTCTCCTCCTCCTCCTCAAATAATCTCTCCACGGCTGTTTTTGGTGTTTTGGATTCTAAGAATTTCACACTGTTGAACAACTTCACTGCCAAGAACACTACCAAGTCCCCTGTGATAAAGGAATTCTTTCTCCAAATTGATATTACTGACTCATTTAGACTATATTTTACTCCTCAACCATCATCTTTTGCGTTTGTAAATGCCATAGAATTATTCCTTGCCCCTGCAGTAGATTTCATCGCTGAGAACTATACCAGTAATCTCCCTTTACACACAGTTTACAGACTCAACGTTGGAGGCTCAACAGTAAATGACACAATAGAGAGAAACTGGGAAACAGATGATAGTCATATTTCTGATGAAAACTCTGCAAAGAAAGCCCCTCCTCAAACACCCAATTTAAATTACCGCGGAAAAAGTTCTGGTTTGGTTGTATCTAATGAGTCTGTAGCCCCACTTTCGGTTTACCAGACTGCTAGAGAGATGATGAATGGCAGTAGTAACATAACATGGTTTTTTAGTGTGAGTAGTAAAGCTAGACACATTGTCCGGGCTCACTTCTGTGACATTGTTGGTCAGCCTGGTAACATTATATTTAACTTGTATGCAAATGGCAACTTCCGCAAGGAGATCGGCAACATTTCTCAATCTTCAATTTTTCAATATTCGGCTGTTCCCTTTTACTATGACTTTGTGGTGAATTATAGTGAGTCTGAACTCTCTAATATCAGCATAAGACCAAAGGATGGTGCTTTTGAACAAAATGCATTTCTCAATGGTCTGGAAATATTGGAGATAGTGGAGGGATTAGCTCCAACTCCCAATGTGAAAGAGTCCAAGAAGAAAGTTGTGGCTCCTGTGGTTGGTTCAGTTCTTGGAGGCCTGGCACTCATCTGCATTTTAATAGTTGGATTTGTGTTTGGTTTCATACACAGAAAGGCAGAAAAGCATGTGGAGACTTCAGTTTGGTCACCAATGCCTACAAATGGAGGAGGGAGTTCTCACAGCTCCGCTCTCAATCTAGATTATCTTGGGTTGAAGATATCTTTCAATGAAATTCAGTCTGCAACGAACAACTTTGACACAAAGTTGGTGATAGGTAAGGGTGGCTTTGGGAATGTTTATAGAGGCACTCTTTTAAATGGCACAAAAGTGGCTGTGAAGCGAGCTTATAAGCGAGATGAGCATGGGTCAGGATCAGGCCAAGGCCTCCTAGAATTCGAAACAGAAATCATAGTGTTATCGAAAATCCGCCACCGCCATCTTATCTCCTTAATTGGTTACTGTAATGAAAGGTCTGAAATGATACTAGTGTATGAGTTCATGGAAAAAGGGACGTTGAGAGATCATTTGTATGATTCAGACGTGCCTCGCTTGTTGTGGAATCAAAGACTTGAAATTTGTACTGGCGCAGCAAGGGGTCTTCATTATCTCCACACAGGTGCAGCTAGGAGAATCATTCACCTAGATGTCAAGTCCACCAACATATTGCTTGATGAAAACCATGTTGCCAAAGTTGCTGACTTTGGCCTTTCGAGATCTGGAGCTCTCGATGAAACGCATGTCAGCACTAATGTTAAAGGCACTTTTGGTTACCTTGATCCTGAGTACATGATGTTTGAACAATTGACAGAAAAATCTGATATTGATCCTAGCTCACTAAGAACTTTTGGTGAGACGGCTGAGAAGTGTTTGCAAGAAGATGCTTCTGATTGGCCAACAATGGCCGATGTGCTATGGGATTTGGAATATGCATTACAGCTTCAGAAAACAACAAAGCTTAAAGAGGTTCATGAGGACAGCACCACCATTGATGCTTCATTAGCACCATTCGGTTTGCCAATTGTTCAGCGTTTTCCTTCACTTGGTTCGACAACAAATGGAGATGATATGAGGGACAACGACTTGGACACAACAGAAAACAAAATTTTCTCCCAATTGAAAATTGGTGATGCCAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

761

Amino Acids

84.7

Weight (kDa)

5.75

Isoelectric Point (pI)

38.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 30 - 113 7.7e-07 Malectin domain
Malectin_like PF12819 33 - 373 2.5e-22 Malectin-like domain
Pkinase PF00069 471 - 657 4e-32 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 472 - 657 1.9e-35 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000413)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23200
fragaria_vesca FvH4_1g16860 FvH4_1g16861
malus_domestica MD02G1018900.v1.1 MD15G1289500.v1.1 MD15G1289600.v1.1 MD15G1289700.v1.1
prunus_persica Prupe.6G227800_v2.0.a1 Prupe.6G228000_v2.0.a1 Prupe.6G228100_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228300_v2.0.a1
pyrus_communis pycom02g01680 pycom02g01690 pycom15g25310 pycom15g25330 pycom15g25340
rosa_chinensis RchiOBHm_Chr1g0324321 RchiOBHm_Chr1g0324331 RchiOBHm_Chr1g0324341 RchiOBHm_Chr1g0324401 RchiOBHm_Chr1g0324441 RchiOBHm_Chr2g0106751 RchiOBHm_Chr2g0106761 RchiOBHm_Chr2g0106771 RchiOBHm_Chr2g0106781 RchiOBHm_Chr2g0106801 RchiOBHm_Chr2g0106811 RchiOBHm_Chr2g0106821
rosa_laevigata RLG00000017539 RLG00000017540 RLG00000017541 RLG00000030200 RLG00000030201
rosa_multiflora Rmu_sc0000751.1_g000001 Rmu_sc0000751.1_g000002 Rmu_sc0000751.1_g000003 Rmu_sc0000751.1_g000005 Rmu_sc0000751.1_g000007 Rmu_sc0000751.1_g000008 Rmu_sc0000751.1_g000018 Rmu_sc0000751.1_g000019 Rmu_sc0000751.1_g000026 Rmu_sc0000751.1_g000027 Rmu_sc0000751.1_g000028 Rmu_sc0000751.1_g000029 Rmu_sc0003410.1_g000012 Rmu_sc0004000.1_g000023 Rmu_sc0004000.1_g000024 Rmu_sc0004082.1_g000015 Rmu_sc0004082.1_g000017 Rmu_sc0026507.1_g000001 Rmu_sc0031196.1_g000001 Rmu_sc0039591.1_g000001
rosa_roxburghii Rroxscaffold_159G00432710 Rroxscaffold_159G00432780 Rroxscaffold_159G00432840 Rroxscaffold_159G00433010 Rroxscaffold_2G00098070 Rroxscaffold_2G00136770 Rroxscaffold_4G00325540 Rroxscaffold_4G00325630 Rroxscaffold_4G00325680
rosa_rugosa Rorug01G0045700 Rorug02G0138500 Rorug02G0138600 Rorug02G0138700 Rorug02G0138800 Rorug02G0138900
rosa_samantha Rh1AG061400 Rh1BG052300 Rh1CG063400 Rh1CG063700 Rh1DG067800 Rh2AG189400 Rh2AG189800 Rh2AG190000 Rh2AG190100 Rh2BG201100 Rh2BG201300 Rh2CG194500 Rh2CG194600 Rh2CG194700 Rh2DG195700 Rh2DG195900 Rh2DG196300 Rh2DG196400 Rh2DG196500 Rh2DG196600
rosa_wichuraiana Rw1G004230 Rw1G005210 Rw2G014900 Rw2G014910 Rw2G014930 Rw2G014940 Rw2G014950 Rw2G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1497
Acc36I ACCTGC 1 cut(s) 155
AccB7I CCANNNNNTGG 1 cut(s) 1070
AccBSI CCGCTC 1 cut(s) 1337
AccII CGCG 1 cut(s) 735
AciI CCGC 6 cut(s) 733, 735, 946, 1335, 1576, 1582
AclI AACGTT 1 cut(s) 615
AclWI GGATC 3 cut(s) 1528, 1919, 1967
AcoI YGGCCR 3 cut(s) 133, 2039, 2049
AcsI RAATTY 7 cut(s) 139, 385, 446, 1380, 1541, 1722, 2250
AcuI CTGAAG 3 cut(s) 306, 1269, 2072
AfaI GTAC 4 cut(s) 295, 306, 1729, 1934
AfiI CCNNNNNNNGG 5 cut(s) 784, 1070, 1187, 1310, 2189
AhdI GACNNNNNGTC 1 cut(s) 869
AhlI ACTAGT 1 cut(s) 1633
AjiI CACGTC 1 cut(s) 1690
AjnI CCWGG 3 cut(s) 130, 904, 1206
AleI CACNNNNGTG 3 cut(s) 885, 1475, 1764
Alw21I GWGCWC 1 cut(s) 1873
Alw26I GTCTC 2 cut(s) 1274, 1994
AlwI GGATC 3 cut(s) 1528, 1919, 1967
AoxI GGCC 7 cut(s) 133, 1204, 1525, 1531, 1852, 2039, 2049
ApeKI GCWGC 2 cut(s) 1736, 1769
ApoI RAATTY 7 cut(s) 139, 385, 446, 1380, 1541, 1722, 2250
ArsI GACNNNNNNTTYG 2 cut(s) 1707, 1739
Asp700I GAANNNNTTC 4 cut(s) 9, 404, 450, 742
AspLEI GCGC 1 cut(s) 1736
AsuC2I CCSGG 1 cut(s) 875
AsuHPI GGTGA 7 cut(s) 216, 1033, 1287, 1429, 1778, 2009, 2285
AsuII TTCGAA 1 cut(s) 1545
BaeI ACNNNNGTAYC 2 cut(s) 1622, 1655
BalI TGGCCA 2 cut(s) 135, 2041
BanII GRGCYC 2 cut(s) 880, 1873
BbsI GAAGAC 1 cut(s) 1739
Bbv12I GWGCWC 1 cut(s) 1873
BbvI GCAGC 2 cut(s) 1748, 1781
BccI CCATC 4 cut(s) 284, 511, 1064, 1593
BceAI ACGGC 2 cut(s) 372, 2019
BcgI CGANNNNNNTGC 2 cut(s) 937, 971
BciT130I CCWGG 3 cut(s) 132, 906, 1208
BciVI GTATCC 1 cut(s) 26
BcnI CCSGG 1 cut(s) 875
BcoDI GTCTC 2 cut(s) 1274, 1994
BcuI ACTAGT 1 cut(s) 1633
BfaI CTAG 8 cut(s) 801, 861, 1346, 1538, 1634, 1773, 1790, 1977
BfmI CTRYAG 3 cut(s) 162, 549, 771
BfuAI ACCTGC 1 cut(s) 155
BfuI GTATCC 1 cut(s) 26
BglII AGATCT 1 cut(s) 1862
BisI GCNGC 2 cut(s) 1737, 1770
BlsI GCNGC 2 cut(s) 1738, 1771
Bme1390I CCNGG 4 cut(s) 132, 875, 906, 1208
BmeRI GACNNNNNGTC 1 cut(s) 869
BmgBI CACGTC 1 cut(s) 1690
BmiI GGNNCC 1 cut(s) 1179
BmrFI CCNGG 4 cut(s) 132, 875, 906, 1208
BmrI ACTGGG 1 cut(s) 664
BmsI GCATC 4 cut(s) 288, 2017, 2128, 2266
BmuI ACTGGG 1 cut(s) 664
BpiI GAAGAC 1 cut(s) 1739
BpmI CTGGAG 1 cut(s) 1887
Bpu14I TTCGAA 1 cut(s) 1545
BpuMI CCSGG 1 cut(s) 875
BsaBI GATNNNNATC 1 cut(s) 1971
BsaJI CCNNGG 3 cut(s) 354, 733, 1528
BsaXI ACNNNNNCTCC 2 cut(s) 161, 191
Bsc4I CCNNNNNNNGG 5 cut(s) 784, 1070, 1187, 1310, 2189
Bse1I ACTGG 5 cut(s) 208, 271, 579, 659, 1735
Bse8I GATNNNNATC 1 cut(s) 1971
BseBI CCWGG 3 cut(s) 132, 906, 1208
BseDI CCNNGG 3 cut(s) 354, 733, 1528
BseGI GGATG 2 cut(s) 56, 1075
BseJI GATNNNNATC 1 cut(s) 1971
BseLI CCNNNNNNNGG 5 cut(s) 784, 1070, 1187, 1310, 2189
BseMII CTCAG 4 cut(s) 333, 558, 1920, 1998
BseNI ACTGG 5 cut(s) 208, 271, 579, 659, 1735
BseRI GAGGAG 8 cut(s) 35, 319, 322, 325, 328, 486, 699, 1329
BseXI GCAGC 2 cut(s) 1748, 1781
BsgI GTGCAG 1 cut(s) 1788
Bsh1236I CGCG 1 cut(s) 735
BshFI GGCC 7 cut(s) 135, 1206, 1527, 1533, 1854, 2041, 2051
BsiHKAI GWGCWC 1 cut(s) 1873
BsiSI CCGG 1 cut(s) 874
BslFI GGGAC 3 cut(s) 415, 1672, 2234
BslI CCNNNNNNNGG 5 cut(s) 784, 1070, 1187, 1310, 2189
BsmAI GTCTC 2 cut(s) 1274, 1994
BsmBI CGTCTC 1 cut(s) 1994
BsmFI GGGAC 3 cut(s) 415, 1672, 2234
BsnI GGCC 7 cut(s) 135, 1206, 1527, 1533, 1854, 2041, 2051
Bsp119I TTCGAA 1 cut(s) 1545
Bsp1286I GDGCHC 2 cut(s) 880, 1873
Bsp143I GATC 6 cut(s) 954, 1520, 1669, 1862, 1924, 1972
BspACI CCGC 6 cut(s) 733, 735, 946, 1335, 1576, 1582
BspANI GGCC 7 cut(s) 135, 1206, 1527, 1533, 1854, 2041, 2051
BspCNI CTCAG 4 cut(s) 332, 559, 1921, 1999
BspFNI CGCG 1 cut(s) 735
BspHI TCATGA 1 cut(s) 2116
BspLI GGNNCC 1 cut(s) 1179
BspMAI CTGCAG 2 cut(s) 166, 553
BspMI ACCTGC 1 cut(s) 155
BspPI GGATC 3 cut(s) 1528, 1919, 1967
BspT104I TTCGAA 1 cut(s) 1545
BsrBI CCGCTC 1 cut(s) 1337
BsrI ACTGG 5 cut(s) 208, 271, 579, 659, 1735
BssECI CCNNGG 3 cut(s) 354, 733, 1528
BssMI GATC 6 cut(s) 954, 1520, 1669, 1862, 1924, 1972
BssT1I CCWWGG 1 cut(s) 1528
Bst2UI CCWGG 3 cut(s) 132, 906, 1208
Bst4CI ACNGT 5 cut(s) 101, 396, 601, 631, 1610
BstBI TTCGAA 1 cut(s) 1545
BstC8I GCNNGC 2 cut(s) 162, 1491
BstDEI CTNAG 6 cut(s) 319, 381, 567, 1929, 1985, 2007
BstDSI CCRYGG 2 cut(s) 354, 733
BstEII GGTNACC 2 cut(s) 1293, 1916
BstF5I GGATG 2 cut(s) 56, 1075
BstFNI CGCG 1 cut(s) 735
BstHHI GCGC 1 cut(s) 1736
BstKTI GATC 6 cut(s) 957, 1523, 1672, 1865, 1927, 1975
BstMAI GTCTC 2 cut(s) 1274, 1994
BstMBI GATC 6 cut(s) 954, 1520, 1669, 1862, 1924, 1972
BstMWI GCNNNNNNNGC 5 cut(s) 701, 945, 1507, 1841, 2147
BstNI CCWGG 3 cut(s) 132, 906, 1208
BstNSI RCATGY 2 cut(s) 1277, 1889
BstPI GGTNACC 2 cut(s) 1293, 1916
BstSCI CCNGG 4 cut(s) 130, 873, 904, 1206
BstSFI CTRYAG 3 cut(s) 162, 549, 771
BstUI CGCG 1 cut(s) 735
BstV1I GCAGC 2 cut(s) 1748, 1781
BstV2I GAAGAC 1 cut(s) 1739
BstX2I RGATCY 1 cut(s) 1862
BstYI RGATCY 1 cut(s) 1862
BsuI GTATCC 1 cut(s) 26
BsuRI GGCC 7 cut(s) 135, 1206, 1527, 1533, 1854, 2041, 2051
BtgI CCRYGG 2 cut(s) 354, 733
BtgZI GCGATG 1 cut(s) 547
BtrI CACGTC 1 cut(s) 1690
BtsCI GGATG 2 cut(s) 56, 1075
BtsI GCAGTG 1 cut(s) 408
BtsIMutI CAGTG 3 cut(s) 282, 392, 408
BveI ACCTGC 1 cut(s) 155
Cac8I GCNNGC 2 cut(s) 162, 1491
CciI TCATGA 1 cut(s) 2116
CfoI GCGC 1 cut(s) 1736
Cfr42I CCGCGG 1 cut(s) 736
Csp6I GTAC 4 cut(s) 294, 305, 1728, 1933
CviAII CATG 9 cut(s) 110, 834, 1274, 1511, 1648, 1829, 1886, 1936, 2117
CviQI GTAC 4 cut(s) 294, 305, 1728, 1933
DdeI CTNAG 6 cut(s) 319, 381, 567, 1929, 1985, 2007
DpnI GATC 6 cut(s) 956, 1522, 1671, 1864, 1926, 1974
DpnII GATC 6 cut(s) 954, 1520, 1669, 1862, 1924, 1972
DraI TTTAAA 2 cut(s) 726, 1464
DriI GACNNNNNGTC 1 cut(s) 869
EaeI YGGCCR 3 cut(s) 133, 2039, 2049
Eam1105I GACNNNNNGTC 1 cut(s) 869
EciI GGCGGA 1 cut(s) 1565
Ecl136II GAGCTC 1 cut(s) 1871
Eco130I CCWWGG 1 cut(s) 1528
Eco147I AGGCCT 2 cut(s) 1206, 1533
Eco24I GRGCYC 2 cut(s) 880, 1873
Eco32I GATATC 1 cut(s) 1368
Eco53kI GAGCTC 1 cut(s) 1871
Eco57I CTGAAG 3 cut(s) 306, 1269, 2072
Eco91I GGTNACC 2 cut(s) 1293, 1916
EcoICRI GAGCTC 1 cut(s) 1871
EcoO65I GGTNACC 2 cut(s) 1293, 1916
EcoRI GAATTC 2 cut(s) 446, 1541
EcoRII CCWGG 3 cut(s) 130, 904, 1206
EcoRV GATATC 1 cut(s) 1368
EcoT14I CCWWGG 1 cut(s) 1528
EcoT22I ATGCAT 2 cut(s) 1093, 2080
EcoT38I GRGCYC 2 cut(s) 880, 1873
ErhI CCWWGG 1 cut(s) 1528
Esp3I CGTCTC 1 cut(s) 1994
FaeI CATG 9 cut(s) 113, 837, 1277, 1514, 1651, 1832, 1889, 1939, 2120
FalI AAGNNNNNCTT 4 cut(s) 434, 466, 1418, 1450
FaqI GGGAC 3 cut(s) 415, 1672, 2234
FatI CATG 9 cut(s) 109, 833, 1273, 1510, 1647, 1828, 1885, 1935, 2116
Fnu4HI GCNGC 2 cut(s) 1737, 1770
FokI GGATG 2 cut(s) 43, 1082
FriOI GRGCYC 2 cut(s) 880, 1873
Fsp4HI GCNGC 2 cut(s) 1737, 1770
FspBI CTAG 8 cut(s) 801, 861, 1346, 1538, 1634, 1773, 1790, 1977
GlaI GCGC 1 cut(s) 1735
GluI GCNGC 2 cut(s) 1737, 1770
GsuI CTGGAG 1 cut(s) 1887
HaeIII GGCC 7 cut(s) 135, 1206, 1527, 1533, 1854, 2041, 2051
HapII CCGG 1 cut(s) 874
HhaI GCGC 1 cut(s) 1736
Hin1II CATG 9 cut(s) 113, 837, 1277, 1514, 1651, 1832, 1889, 1939, 2120
Hin6I GCGC 1 cut(s) 1734
HinP1I GCGC 1 cut(s) 1734
HindIII AAGCTT 1 cut(s) 2102
HpaII CCGG 1 cut(s) 874
HphI GGTGA 7 cut(s) 216, 1033, 1287, 1429, 1778, 2009, 2285
Hpy166II GTNNAC 4 cut(s) 107, 604, 790, 1803
Hpy188I TCNGA 7 cut(s) 682, 1039, 1624, 1687, 1966, 2035, 2091
Hpy188III TCNNGA 8 cut(s) 1106, 1346, 1518, 1860, 1866, 1874, 1928, 2117
Hpy8I GTNNAC 4 cut(s) 107, 604, 790, 1803
HpyAV CCTTC 3 cut(s) 71, 240, 2193
HpyCH4III ACNGT 5 cut(s) 101, 396, 601, 631, 1610
HpyCH4IV ACGT 3 cut(s) 615, 1661, 1689
HpyF10VI GCNNNNNNNGC 5 cut(s) 701, 945, 1507, 1841, 2147
HpyF3I CTNAG 6 cut(s) 319, 381, 567, 1929, 1985, 2007
HpySE526I ACGT 3 cut(s) 615, 1661, 1689
Hsp92II CATG 9 cut(s) 113, 837, 1277, 1514, 1651, 1832, 1889, 1939, 2120
HspAI GCGC 1 cut(s) 1734
KspI CCGCGG 1 cut(s) 736
Kzo9I GATC 6 cut(s) 954, 1520, 1669, 1862, 1924, 1972
LmnI GCTCC 4 cut(s) 1141, 1183, 1337, 1868
Lsp1109I GCAGC 2 cut(s) 1748, 1781
LweI GCATC 4 cut(s) 288, 2017, 2128, 2266
MaeI CTAG 8 cut(s) 801, 861, 1346, 1538, 1634, 1773, 1790, 1977
MaeII ACGT 3 cut(s) 615, 1661, 1689
MaeIII GTNAC 8 cut(s) 167, 210, 824, 887, 908, 1293, 1604, 1916
MalI GATC 6 cut(s) 956, 1522, 1671, 1864, 1926, 1974
MbiI CCGCTC 1 cut(s) 1337
MboI GATC 6 cut(s) 954, 1520, 1669, 1862, 1924, 1972
MboII GAAGA 6 cut(s) 299, 966, 1177, 1375, 1739, 2036
MfeI CAATTG 3 cut(s) 1949, 2166, 2261
MflI RGATCY 1 cut(s) 1862
MhlI GDGCHC 2 cut(s) 880, 1873
MlsI TGGCCA 2 cut(s) 135, 2041
MluNI TGGCCA 2 cut(s) 135, 2041
MlyI GAGTC 5 cut(s) 467, 603, 776, 1043, 1166
MmeI TCCRAC 3 cut(s) 598, 1163, 1213
Mox20I TGGCCA 2 cut(s) 135, 2041
Mph1103I ATGCAT 2 cut(s) 1093, 2080
MroXI GAANNNNTTC 4 cut(s) 9, 404, 450, 742
MscI TGGCCA 2 cut(s) 135, 2041
MseI TTAA 7 cut(s) 725, 921, 1226, 1463, 1598, 1902, 2106
MslI CAYNNNNRTG 6 cut(s) 114, 885, 1475, 1677, 1764, 1791
Msp20I TGGCCA 2 cut(s) 135, 2041
MspA1I CMGCKG 1 cut(s) 735
MspI CCGG 1 cut(s) 874
MspR9I CCNGG 4 cut(s) 132, 875, 906, 1208
MunI CAATTG 3 cut(s) 1949, 2166, 2261
MvaI CCWGG 3 cut(s) 132, 906, 1208
MvnI CGCG 1 cut(s) 735
MwoI GCNNNNNNNGC 5 cut(s) 701, 945, 1507, 1841, 2147
NciI CCSGG 1 cut(s) 875
NdeII GATC 6 cut(s) 954, 1520, 1669, 1862, 1924, 1972
NlaIII CATG 9 cut(s) 113, 837, 1277, 1514, 1651, 1832, 1889, 1939, 2120
NlaIV GGNNCC 1 cut(s) 1179
NmuCI GTSAC 2 cut(s) 887, 1293
NsiI ATGCAT 2 cut(s) 1093, 2080
NspI RCATGY 2 cut(s) 1277, 1889
NspV TTCGAA 1 cut(s) 1545
OliI CACNNNNGTG 3 cut(s) 885, 1475, 1764
PagI TCATGA 1 cut(s) 2116
PceI AGGCCT 2 cut(s) 1206, 1533
PdmI GAANNNNTTC 4 cut(s) 9, 404, 450, 742
PfeI GAWTC 5 cut(s) 152, 377, 1682, 1708, 1779
PflMI CCANNNNNTGG 1 cut(s) 1070
PkrI GCNGC 2 cut(s) 1738, 1771
PleI GAGTC 5 cut(s) 467, 603, 775, 1042, 1165
PpsI GAGTC 5 cut(s) 467, 603, 775, 1042, 1165
PsiI TTATAA 1 cut(s) 1497
Psp124BI GAGCTC 1 cut(s) 1873
Psp1406I AACGTT 1 cut(s) 615
Psp6I CCWGG 3 cut(s) 130, 904, 1206
PspEI GGTNACC 2 cut(s) 1293, 1916
PspGI CCWGG 3 cut(s) 130, 904, 1206
PspN4I GGNNCC 1 cut(s) 1179
PstI CTGCAG 2 cut(s) 166, 553
PsuI RGATCY 1 cut(s) 1862
RsaI GTAC 4 cut(s) 295, 306, 1729, 1934
RsaNI GTAC 4 cut(s) 294, 305, 1728, 1933
RseI CAYNNNNRTG 6 cut(s) 114, 885, 1475, 1677, 1764, 1791
SacI GAGCTC 1 cut(s) 1873
SacII CCGCGG 1 cut(s) 736
SaqAI TTAA 7 cut(s) 725, 921, 1226, 1463, 1598, 1902, 2106
SatI GCNGC 2 cut(s) 1737, 1770
Sau3AI GATC 6 cut(s) 954, 1520, 1669, 1862, 1924, 1972
SbfI CCTGCAGG 1 cut(s) 166
SchI GAGTC 5 cut(s) 467, 603, 776, 1043, 1166
ScrFI CCNGG 4 cut(s) 132, 875, 906, 1208
SdaI CCTGCAGG 1 cut(s) 166
SduI GDGCHC 2 cut(s) 880, 1873
SfaNI GCATC 4 cut(s) 288, 2017, 2128, 2266
SfcI CTRYAG 3 cut(s) 162, 549, 771
Sfr303I CCGCGG 1 cut(s) 736
SfuI TTCGAA 1 cut(s) 1545
SgrBI CCGCGG 1 cut(s) 736
SmiI ATTTAAAT 1 cut(s) 726
SmiMI CAYNNNNRTG 6 cut(s) 114, 885, 1475, 1677, 1764, 1791
SpeI ACTAGT 1 cut(s) 1633
Sse8387I CCTGCAGG 1 cut(s) 166
SseBI AGGCCT 2 cut(s) 1206, 1533
SsiI CCGC 6 cut(s) 733, 735, 946, 1335, 1576, 1582
SspI AATATT 2 cut(s) 989, 1113
SspMI CTAG 8 cut(s) 801, 861, 1346, 1538, 1634, 1773, 1790, 1977
SstI GAGCTC 1 cut(s) 1873
StuI AGGCCT 2 cut(s) 1206, 1533
StyD4I CCNGG 4 cut(s) 130, 873, 904, 1206
StyI CCWWGG 1 cut(s) 1528
SwaI ATTTAAAT 1 cut(s) 726
TaaI ACNGT 5 cut(s) 101, 396, 601, 631, 1610
TaiI ACGT 3 cut(s) 618, 1664, 1692
TaqI TCGA 5 cut(s) 1545, 1568, 1859, 1875, 2195
TatI WGTACW 2 cut(s) 1727, 1932
TfiI GAWTC 5 cut(s) 152, 377, 1682, 1708, 1779
Tru1I TTAA 7 cut(s) 725, 921, 1226, 1463, 1598, 1902, 2106
Tru9I TTAA 7 cut(s) 725, 921, 1226, 1463, 1598, 1902, 2106
TscAI CASTG 3 cut(s) 289, 399, 415
TseFI GTSAC 2 cut(s) 887, 1293
TseI GCWGC 2 cut(s) 1736, 1769
Tsp45I GTSAC 2 cut(s) 887, 1293
TspRI CASTG 3 cut(s) 289, 399, 415
Van91I CCANNNNNTGG 1 cut(s) 1070
XapI RAATTY 7 cut(s) 139, 385, 446, 1380, 1541, 1722, 2250
XbaI TCTAGA 1 cut(s) 1345
XceI RCATGY 2 cut(s) 1277, 1889
XcmI CCANNNNNNNNNTGG 2 cut(s) 143, 2267
XmnI GAANNNNTTC 4 cut(s) 9, 404, 450, 742
XspI CTAG 8 cut(s) 801, 861, 1346, 1538, 1634, 1773, 1790, 1977
Zsp2I ATGCAT 2 cut(s) 1093, 2080
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.