RLG00000017541

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000413
Physical Location & Seq
Reverse (-)
18011373 .. 18013874
2502 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017541

Sequence Viewer

Length: 2502 bp
ATGGAAATTCTTCAAAAGTGCAGAGTCCATGTCCCCATATGTTGTCTGCTTGTTTTTCTCCTCCAATTCTCAAACCTTCACTTTCTCTCTTTCGCTGATGATTACTACATCAATTGTGGCTCGGATGCTAATGTGAACCTCACTACCGGCCAGAATTTCGTTGGAGACTCGAATTCTGGTTCCTCTTTTTCCAAAAGCGACGCCATCACAGACATGAACCAGTTGCCAGCTTCAGTATCACCTCTCTACCAGACAGCTAGAGCCTCCAGTGATCCTTTCTACTATCAGTTCAAGATCACTGTTGGTACTTATCTGGTACGCCTACACTTCTTACCTTTTTCTTCCACCTCAAGTGATCTGTCCTCAGCTGTTTTTGATGTTTTGGATTCTACAAAGTTCACACTGTTGAACAATTTCACTGCCAAGAATAGTACTAGTTCTCCTTTGATAAAGGAGTTCTTTATCAGAATTGATAGTACTGACTCATTTAGACTGTATTTTAAGCCCCGGACATCGTCTTTGGCATTTGTAAATGCCATTGAATTCTTCGCCATCCCTTCAGATTTCACCAACTTCATCCCTGAGGATTACACTAGTAATTTCCCTTTAAAGACAATTTACAGAGTGAATGTTGGGGGCCCTTCACAAAATGATACATTGTGGAGAAGCTGGGAAACGGATGACACTTACCTGCCTGATCCAAACTCTGCTAAGGATAGCAACAAAGGTACCCTCAATAGAAATTACTACGGAGAAATTGATGGTCTGGTTGCATCTAATGCGTCTGTTGCCCCGGATTGGGTTTACCAGACTGCTAAAGTGATGAATATCACTGCTAGCAGGCCAGCCAATTCCTCCAACATAACTTGGTCTTTTAGAGTGAGTGGGAATGCTAGACACATTCTCCGGGCTCACTTCTGTGACATTGTTGATCAGCCTTATAATGTTGTATTTAACTTGTATTCAAATGGCAACTTGCGCAAGGAGATTGGCAGCAGCAATAACACGATTTCTGGACTTTCGGCCCTTCCTTTCTACTATGATTTTATGGTGAGCCCTAGTGAGTCTGAACTCATTAACATCAGCATAAGACCTAACTTGGAAGATGCTACAGTTCTGAATGCATTTCTAAATGGGCTAGAAATATTGGAGATAATGGAGGGTGTAGCTTCAATTCCTAATGTGAAAGAGTCCAAGAAGAATATGGTGGCTCTTGTTGTTGGTTCAGTTCTTGGAGGCTTGTCACTCATCTGCATTTTAGTAGCTGGATTTGTGTTCTGTTCGAGACACAGAAAGGCAGAAAAGCAAGTTGAAATGGCAGATTGGTCACCAATGCTTGAAAACGGAGGGAGCTTCTACAGCAGAGGGACTGAAAGAACCATCACTGGATCGCCTATGAATCTAATGAATCTTGGGTTGAAGATATCTTTTGCTGAAATTCAGTCTGCAACAAACAAGTTTGACACCAAATTGATGATAGGTAAGGGTGGCTTCGGGAACGTTTATAGTGGGACTCTATATAATGGCACAAAAGTGGCTGTAAAGCGAGCTTATAAGCGAGATGAGCATGGGTCAGGATCAGGCCAAGGCCGTCCAGAATTTCAAACAGAGATTATGGTGTTGTCCAAGATTCGCCACCGCCATCTTGTGTCCTTAATTGGTTACTGTGATGAAAGGTCTGAGATGATACTAGTCTATGAGTTCATGGAAAAGGGGACCTTGAGAGACCATTTGTATGATTCGAACTTGCCTTGCTTGACATGGAAGCAAAGACTTGAAATTTGTACTGGAGCAGCAAGGGGTCTTCATTATCTCCACACAGGTGCAGCTGGGGGAATCATTCACCGTGATGTCAAGTCCACCAACATATTGCTTGATGAAAACCATGTCGCCAAAGTTGCTGACTTTGGGCTTTCAAGATCTGGACCTCTCGATGAAACCCATGTCAGCACAAATGTCAAAGGCACTTTTGGTTACCTTGATCCTGAGTACATGATGTCTGAACAGCTGACAGAAAAATCTGATGTTTACTCATTTGGTGTAGTTCTTCTTGAGGTGTTATGTGGAAGACCTGCTATTGATCCAACACTTCCAAGAGAGCAAATGAATTTAGCTGAATGGGGAATGCTGTGCAAGAAAAAAGGGTTGCTTGAACAGATTGTTGATTCTCCATTGAAAAATCAGGTTAATCCTAGCTCACTGAGAAAGTTCGGTGAGACGGTTGAGAAGTGTTTGCAAGAAGATGCTTCTGATAGGCCAACCATGGCTGATGTGCTGTGGGATTTGGAGTATGCATTACAGCTTCAGCAAACAACAAAGCTTAAAGAGGCTCATGAGGACAGCACAACAATTGATGCTTCATCAGCAGCATATCGTTTGCCAGTTGTTCAACGCTTTCCTTCACTTGGTTCAACCATAAATGGAGATGATATGAGAGACGACGAATTGGACACAACAGCAAACGAAATTTTCTCCCAATTGAAAATTGGTGATGCCAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

834

Amino Acids

92.69

Weight (kDa)

5.52

Isoelectric Point (pI)

38.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 35 - 128 6.6e-08 Malectin domain
Pkinase PF00069 490 - 759 2.2e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 491 - 760 1.7e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000413)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23200
fragaria_vesca FvH4_1g16860 FvH4_1g16861
malus_domestica MD02G1018900.v1.1 MD15G1289500.v1.1 MD15G1289600.v1.1 MD15G1289700.v1.1
prunus_persica Prupe.6G227800_v2.0.a1 Prupe.6G228000_v2.0.a1 Prupe.6G228100_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228300_v2.0.a1
pyrus_communis pycom02g01680 pycom02g01690 pycom15g25310 pycom15g25330 pycom15g25340
rosa_chinensis RchiOBHm_Chr1g0324321 RchiOBHm_Chr1g0324331 RchiOBHm_Chr1g0324341 RchiOBHm_Chr1g0324401 RchiOBHm_Chr1g0324441 RchiOBHm_Chr2g0106751 RchiOBHm_Chr2g0106761 RchiOBHm_Chr2g0106771 RchiOBHm_Chr2g0106781 RchiOBHm_Chr2g0106801 RchiOBHm_Chr2g0106811 RchiOBHm_Chr2g0106821
rosa_laevigata RLG00000017539 RLG00000017540 RLG00000017541 RLG00000030200 RLG00000030201
rosa_multiflora Rmu_sc0000751.1_g000001 Rmu_sc0000751.1_g000002 Rmu_sc0000751.1_g000003 Rmu_sc0000751.1_g000005 Rmu_sc0000751.1_g000007 Rmu_sc0000751.1_g000008 Rmu_sc0000751.1_g000018 Rmu_sc0000751.1_g000019 Rmu_sc0000751.1_g000026 Rmu_sc0000751.1_g000027 Rmu_sc0000751.1_g000028 Rmu_sc0000751.1_g000029 Rmu_sc0003410.1_g000012 Rmu_sc0004000.1_g000023 Rmu_sc0004000.1_g000024 Rmu_sc0004082.1_g000015 Rmu_sc0004082.1_g000017 Rmu_sc0026507.1_g000001 Rmu_sc0031196.1_g000001 Rmu_sc0039591.1_g000001
rosa_roxburghii Rroxscaffold_159G00432710 Rroxscaffold_159G00432780 Rroxscaffold_159G00432840 Rroxscaffold_159G00433010 Rroxscaffold_2G00098070 Rroxscaffold_2G00136770 Rroxscaffold_4G00325540 Rroxscaffold_4G00325630 Rroxscaffold_4G00325680
rosa_rugosa Rorug01G0045700 Rorug02G0138500 Rorug02G0138600 Rorug02G0138700 Rorug02G0138800 Rorug02G0138900
rosa_samantha Rh1AG061400 Rh1BG052300 Rh1CG063400 Rh1CG063700 Rh1DG067800 Rh2AG189400 Rh2AG189800 Rh2AG190000 Rh2AG190100 Rh2BG201100 Rh2BG201300 Rh2CG194500 Rh2CG194600 Rh2CG194700 Rh2DG195700 Rh2DG195900 Rh2DG196300 Rh2DG196400 Rh2DG196500 Rh2DG196600
rosa_wichuraiana Rw1G004230 Rw1G005210 Rw2G014900 Rw2G014910 Rw2G014930 Rw2G014940 Rw2G014950 Rw2G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 942, 1554
Acc16I TGCGCA 1 cut(s) 980
Acc36I ACCTGC 2 cut(s) 699, 2080
Acc65I GGTACC 1 cut(s) 728
AccB1I GGYRCC 1 cut(s) 728
AciI CCGC 1 cut(s) 1639
AclI AACGTT 1 cut(s) 1500
AclWI GGATC 6 cut(s) 266, 692, 1396, 1585, 1976, 2075
AcoI YGGCCR 1 cut(s) 148
AcsI RAATTY 9 cut(s) 6, 154, 172, 542, 1437, 1598, 1779, 2107, 2466
AcuI CTGAAG 3 cut(s) 216, 543, 2288
AcyI GRCGYC 1 cut(s) 201
AfaI GTAC 7 cut(s) 307, 318, 433, 478, 730, 1786, 1991
AfiI CCNNNNNNNGG 3 cut(s) 798, 799, 2405
AhlI ACTAGT 3 cut(s) 434, 593, 1690
AleI CACNNNNGTG 3 cut(s) 918, 1532, 1821
Alw26I GTCTC 5 cut(s) 159, 1279, 1719, 2210, 2430
AlwI GGATC 6 cut(s) 266, 692, 1396, 1585, 1976, 2075
AoxI GGCC 7 cut(s) 148, 637, 842, 1023, 1582, 1588, 2255
ApaI GGGCCC 1 cut(s) 641
ApeKI GCWGC 5 cut(s) 993, 996, 1793, 1826, 2366
ApoI RAATTY 9 cut(s) 6, 154, 172, 542, 1437, 1598, 1779, 2107, 2466
ArsI GACNNNNNNTTYG 4 cut(s) 502, 534, 1764, 1796
Asp700I GAANNNNTTC 2 cut(s) 9, 413
Asp718I GGTACC 1 cut(s) 728
AspLEI GCGC 1 cut(s) 981
AspS9I GGNCC 5 cut(s) 637, 638, 1024, 1716, 1925
AsuC2I CCSGG 3 cut(s) 508, 794, 908
AsuHPI GGTGA 7 cut(s) 231, 559, 1063, 1320, 1835, 2225, 2501
AsuII TTCGAA 1 cut(s) 1742
AsuNHI GCTAGC 1 cut(s) 836
AvaII GGWCC 2 cut(s) 1716, 1925
AxyI CCTNAGG 1 cut(s) 582
BaeGI GKGCMC 1 cut(s) 641
BaeI ACNNNNGTAYC 2 cut(s) 712, 745
BanI GGYRCC 1 cut(s) 728
BanII GRGCYC 3 cut(s) 641, 913, 1058
BbsI GAAGAC 2 cut(s) 1796, 2074
BbvCI CCTCAGC 1 cut(s) 364
BbvI GCAGC 5 cut(s) 1005, 1008, 1805, 1838, 2378
BccI CCATC 5 cut(s) 212, 560, 755, 1388, 1650
BceAI ACGGC 1 cut(s) 1575
BclI TGATCA 1 cut(s) 931
BcnI CCSGG 3 cut(s) 508, 794, 908
BcoDI GTCTC 5 cut(s) 159, 1279, 1719, 2210, 2430
BcuI ACTAGT 3 cut(s) 434, 593, 1690
BfaI CTAG 9 cut(s) 258, 435, 594, 837, 894, 1059, 1139, 1691, 2193
BfmI CTRYAG 2 cut(s) 1110, 1357
BfuAI ACCTGC 2 cut(s) 699, 2080
BglII AGATCT 1 cut(s) 1919
BisI GCNGC 5 cut(s) 994, 997, 1794, 1827, 2367
BlsI GCNGC 5 cut(s) 995, 998, 1795, 1828, 2368
BmcAI AGTACT 2 cut(s) 433, 478
Bme1390I CCNGG 3 cut(s) 508, 794, 908
Bme18I GGWCC 2 cut(s) 1716, 1925
BmgT120I GGNCC 5 cut(s) 637, 638, 1024, 1716, 1925
BmiI GGNNCC 5 cut(s) 181, 638, 639, 730, 1717
BmrFI CCNGG 3 cut(s) 508, 794, 908
BmsI GCATC 6 cut(s) 115, 782, 1096, 2233, 2344, 2482
BmtI GCTAGC 1 cut(s) 840
BpiI GAAGAC 2 cut(s) 1796, 2074
BpmI CTGGAG 2 cut(s) 250, 1809
Bpu10I CCTNAGC 2 cut(s) 364, 711
Bpu14I TTCGAA 1 cut(s) 1742
BpuEI CTTGAG 3 cut(s) 334, 1741, 2072
BpuMI CCSGG 3 cut(s) 508, 794, 908
BsaBI GATNNNNATC 1 cut(s) 827
BsaHI GRCGYC 1 cut(s) 201
BsaI GGTCTC 1 cut(s) 1719
BsaJI CCNNGG 4 cut(s) 506, 792, 1585, 2262
BsaXI ACNNNNNCTCC 4 cut(s) 424, 454, 888, 918
Bsc4I CCNNNNNNNGG 3 cut(s) 798, 799, 2405
Bse118I RCCGGY 1 cut(s) 146
Bse1I ACTGG 5 cut(s) 220, 267, 1390, 1792, 2381
Bse21I CCTNAGG 1 cut(s) 582
Bse8I GATNNNNATC 1 cut(s) 827
BseDI CCNNGG 4 cut(s) 506, 792, 1585, 2262
BseGI GGATG 4 cut(s) 130, 552, 576, 685
BseJI GATNNNNATC 1 cut(s) 827
BseLI CCNNNNNNNGG 3 cut(s) 798, 799, 2405
BseMII CTCAG 5 cut(s) 378, 573, 1671, 1977, 2192
BseNI ACTGG 5 cut(s) 220, 267, 1390, 1792, 2381
BseRI GAGGAG 1 cut(s) 50
BseSI GKGCMC 1 cut(s) 641
BseXI GCAGC 5 cut(s) 1005, 1008, 1805, 1838, 2378
BseYI CCCAGC 2 cut(s) 669, 1829
BsgI GTGCAG 2 cut(s) 40, 1845
BshFI GGCC 7 cut(s) 150, 639, 844, 1025, 1584, 1590, 2257
BshNI GGYRCC 1 cut(s) 728
BsiSI CCGG 4 cut(s) 147, 508, 794, 907
BslFI GGGAC 4 cut(s) 17, 1381, 1525, 1729
BslI CCNNNNNNNGG 3 cut(s) 798, 799, 2405
BsmAI GTCTC 5 cut(s) 159, 1279, 1719, 2210, 2430
BsmBI CGTCTC 2 cut(s) 2210, 2430
BsmFI GGGAC 4 cut(s) 17, 1381, 1525, 1729
BsmI GAATGC 3 cut(s) 895, 1126, 2130
BsnI GGCC 7 cut(s) 150, 639, 844, 1025, 1584, 1590, 2257
Bso31I GGTCTC 1 cut(s) 1719
Bsp119I TTCGAA 1 cut(s) 1742
Bsp120I GGGCCC 1 cut(s) 637
Bsp1286I GDGCHC 3 cut(s) 641, 913, 1058
Bsp19I CCATGG 1 cut(s) 2262
BspACI CCGC 1 cut(s) 1639
BspANI GGCC 7 cut(s) 150, 639, 844, 1025, 1584, 1590, 2257
BspCNI CTCAG 5 cut(s) 377, 574, 1672, 1978, 2193
BspHI TCATGA 1 cut(s) 2332
BspLI GGNNCC 5 cut(s) 181, 638, 639, 730, 1717
BspMI ACCTGC 2 cut(s) 699, 2080
BspOI GCTAGC 1 cut(s) 840
BspPI GGATC 6 cut(s) 266, 692, 1396, 1585, 1976, 2075
BspT104I TTCGAA 1 cut(s) 1742
BspT107I GGYRCC 1 cut(s) 728
BspTNI GGTCTC 1 cut(s) 1719
BsrFI RCCGGY 1 cut(s) 146
BsrI ACTGG 5 cut(s) 220, 267, 1390, 1792, 2381
BssAI RCCGGY 1 cut(s) 146
BssECI CCNNGG 4 cut(s) 506, 792, 1585, 2262
BssNI GRCGYC 1 cut(s) 201
BssT1I CCWWGG 2 cut(s) 1585, 2262
Bst4CI ACNGT 7 cut(s) 301, 405, 495, 1114, 1667, 1847, 2221
BstACI GRCGYC 1 cut(s) 201
BstAPI GCANNNNNTGC 1 cut(s) 779
BstBI TTCGAA 1 cut(s) 1742
BstC8I GCNNGC 5 cut(s) 228, 838, 842, 846, 1548
BstDEI CTNAG 6 cut(s) 364, 582, 711, 1680, 1986, 2201
BstDSI CCRYGG 1 cut(s) 2262
BstEII GGTNACC 2 cut(s) 1326, 1973
BstF5I GGATG 4 cut(s) 130, 552, 576, 685
BstHHI GCGC 1 cut(s) 981
BstMAI GTCTC 5 cut(s) 159, 1279, 1719, 2210, 2430
BstMWI GCNNNNNNNGC 7 cut(s) 779, 788, 978, 1359, 1564, 1898, 2363
BstPI GGTNACC 2 cut(s) 1326, 1973
BstSCI CCNGG 3 cut(s) 506, 792, 906
BstSFI CTRYAG 2 cut(s) 1110, 1357
BstSLI GKGCMC 1 cut(s) 641
BstV1I GCAGC 5 cut(s) 1005, 1008, 1805, 1838, 2378
BstV2I GAAGAC 2 cut(s) 1796, 2074
BstX2I RGATCY 1 cut(s) 1919
BstYI RGATCY 1 cut(s) 1919
Bsu36I CCTNAGG 1 cut(s) 582
BsuRI GGCC 7 cut(s) 150, 639, 844, 1025, 1584, 1590, 2257
BtgI CCRYGG 1 cut(s) 2262
BtsCI GGATG 4 cut(s) 130, 552, 576, 685
BtsI GCAGTG 2 cut(s) 417, 831
BtsIMutI CAGTG 7 cut(s) 274, 297, 401, 417, 831, 1383, 2198
BveI ACCTGC 2 cut(s) 699, 2080
Cac8I GCNNGC 5 cut(s) 228, 838, 842, 846, 1548
CciI TCATGA 1 cut(s) 2332
CfoI GCGC 1 cut(s) 981
Cfr10I RCCGGY 1 cut(s) 146
Cfr13I GGNCC 5 cut(s) 637, 638, 1024, 1716, 1925
CseI GACGC 2 cut(s) 209, 771
Csp6I GTAC 7 cut(s) 306, 317, 432, 477, 729, 1785, 1990
CviQI GTAC 7 cut(s) 306, 317, 432, 477, 729, 1785, 1990
DdeI CTNAG 6 cut(s) 364, 582, 711, 1680, 1986, 2201
DraI TTTAAA 1 cut(s) 609
EaeI YGGCCR 1 cut(s) 148
Eco130I CCWWGG 2 cut(s) 1585, 2262
Eco24I GRGCYC 3 cut(s) 641, 913, 1058
Eco31I GGTCTC 1 cut(s) 1719
Eco32I GATATC 1 cut(s) 1425
Eco47I GGWCC 2 cut(s) 1716, 1925
Eco57I CTGAAG 3 cut(s) 216, 543, 2288
Eco81I CCTNAGG 1 cut(s) 582
Eco91I GGTNACC 2 cut(s) 1326, 1973
EcoO109I RGGNCCY 3 cut(s) 637, 638, 1716
EcoO65I GGTNACC 2 cut(s) 1326, 1973
EcoRI GAATTC 2 cut(s) 172, 542
EcoRV GATATC 1 cut(s) 1425
EcoT14I CCWWGG 2 cut(s) 1585, 2262
EcoT22I ATGCAT 2 cut(s) 1126, 2296
EcoT38I GRGCYC 3 cut(s) 641, 913, 1058
ErhI CCWWGG 2 cut(s) 1585, 2262
Esp3I CGTCTC 2 cut(s) 2210, 2430
FalI AAGNNNNNCTT 8 cut(s) 443, 475, 1475, 1507, 1703, 1735, 2133, 2165
FaqI GGGAC 4 cut(s) 17, 1381, 1525, 1729
FauNDI CATATG 1 cut(s) 38
FbaI TGATCA 1 cut(s) 931
Fnu4HI GCNGC 5 cut(s) 994, 997, 1794, 1827, 2367
FokI GGATG 4 cut(s) 137, 539, 563, 692
FriOI GRGCYC 3 cut(s) 641, 913, 1058
Fsp4HI GCNGC 5 cut(s) 994, 997, 1794, 1827, 2367
FspBI CTAG 9 cut(s) 258, 435, 594, 837, 894, 1059, 1139, 1691, 2193
FspI TGCGCA 1 cut(s) 980
GlaI GCGC 1 cut(s) 980
GluI GCNGC 5 cut(s) 994, 997, 1794, 1827, 2367
GsaI CCCAGC 2 cut(s) 673, 1833
GsuI CTGGAG 2 cut(s) 250, 1809
HaeIII GGCC 7 cut(s) 150, 639, 844, 1025, 1584, 1590, 2257
HapII CCGG 4 cut(s) 147, 508, 794, 907
HgaI GACGC 2 cut(s) 209, 771
HhaI GCGC 1 cut(s) 981
Hin1I GRCGYC 1 cut(s) 201
Hin6I GCGC 1 cut(s) 979
HinP1I GCGC 1 cut(s) 979
HindIII AAGCTT 1 cut(s) 2318
HpaII CCGG 4 cut(s) 147, 508, 794, 907
HphI GGTGA 7 cut(s) 231, 559, 1063, 1320, 1835, 2225, 2501
Hpy166II GTNNAC 5 cut(s) 136, 399, 805, 1860, 2029
Hpy188I TCNGA 9 cut(s) 124, 467, 562, 1069, 1119, 1681, 2002, 2023, 2251
Hpy8I GTNNAC 5 cut(s) 136, 399, 805, 1860, 2029
Hpy99I CGWCG 2 cut(s) 203, 2444
HpyAV CCTTC 5 cut(s) 86, 567, 651, 1037, 2409
HpyCH4III ACNGT 7 cut(s) 301, 405, 495, 1114, 1667, 1847, 2221
HpyCH4IV ACGT 1 cut(s) 1500
HpyCH4V TGCA 9 cut(s) 21, 773, 1124, 1254, 1448, 1826, 2133, 2236, 2294
HpyF10VI GCNNNNNNNGC 7 cut(s) 779, 788, 978, 1359, 1564, 1898, 2363
HpyF3I CTNAG 6 cut(s) 364, 582, 711, 1680, 1986, 2201
HpySE526I ACGT 1 cut(s) 1500
Hsp92I GRCGYC 1 cut(s) 201
HspAI GCGC 1 cut(s) 979
KpnI GGTACC 1 cut(s) 732
Ksp22I TGATCA 1 cut(s) 931
LmnI GCTCC 2 cut(s) 1350, 1790
Lsp1109I GCAGC 5 cut(s) 1005, 1008, 1805, 1838, 2378
LweI GCATC 6 cut(s) 115, 782, 1096, 2233, 2344, 2482
MaeI CTAG 9 cut(s) 258, 435, 594, 837, 894, 1059, 1139, 1691, 2193
MaeII ACGT 1 cut(s) 1500
MaeIII GTNAC 5 cut(s) 920, 1242, 1326, 1661, 1973
MboII GAAGA 9 cut(s) 333, 538, 1115, 1210, 1432, 1796, 2039, 2079, 2252
MfeI CAATTG 3 cut(s) 112, 2349, 2477
MflI RGATCY 1 cut(s) 1919
MhlI GDGCHC 3 cut(s) 641, 913, 1058
MlyI GAGTC 6 cut(s) 33, 161, 476, 1073, 1199, 1507
MmeI TCCRAC 3 cut(s) 142, 882, 2108
Mph1103I ATGCAT 2 cut(s) 1126, 2296
MroXI GAANNNNTTC 2 cut(s) 9, 413
MseI TTAA 7 cut(s) 501, 608, 954, 1077, 1655, 2187, 2322
MslI CAYNNNNRTG 6 cut(s) 212, 918, 1532, 1734, 1821, 1848
MspA1I CMGCKG 3 cut(s) 368, 1829, 2008
MspI CCGG 4 cut(s) 147, 508, 794, 907
MspR9I CCNGG 3 cut(s) 508, 794, 908
MunI CAATTG 3 cut(s) 112, 2349, 2477
Mva1269I GAATGC 3 cut(s) 895, 1126, 2130
MwoI GCNNNNNNNGC 7 cut(s) 779, 788, 978, 1359, 1564, 1898, 2363
NciI CCSGG 3 cut(s) 508, 794, 908
NcoI CCATGG 1 cut(s) 2262
NdeI CATATG 1 cut(s) 38
NheI GCTAGC 1 cut(s) 836
NlaIV GGNNCC 5 cut(s) 181, 638, 639, 730, 1717
NmuCI GTSAC 3 cut(s) 920, 1242, 1326
NsbI TGCGCA 1 cut(s) 980
NsiI ATGCAT 2 cut(s) 1126, 2296
NspV TTCGAA 1 cut(s) 1742
OliI CACNNNNGTG 3 cut(s) 918, 1532, 1821
PagI TCATGA 1 cut(s) 2332
PctI GAATGC 3 cut(s) 895, 1126, 2130
PdmI GAANNNNTTC 2 cut(s) 9, 413
PfeI GAWTC 7 cut(s) 386, 1399, 1408, 1630, 1739, 1836, 2165
PflFI GACNNNGTC 1 cut(s) 514
PkrI GCNGC 5 cut(s) 995, 998, 1795, 1828, 2368
PleI GAGTC 6 cut(s) 32, 161, 476, 1072, 1198, 1507
PpsI GAGTC 6 cut(s) 32, 161, 476, 1072, 1198, 1507
PpuMI RGGWCCY 1 cut(s) 1716
PsiI TTATAA 2 cut(s) 942, 1554
Psp1406I AACGTT 1 cut(s) 1500
Psp5II RGGWCCY 1 cut(s) 1716
PspEI GGTNACC 2 cut(s) 1326, 1973
PspFI CCCAGC 2 cut(s) 669, 1829
PspN4I GGNNCC 5 cut(s) 181, 638, 639, 730, 1717
PspOMI GGGCCC 1 cut(s) 637
PspPI GGNCC 5 cut(s) 637, 638, 1024, 1716, 1925
PspPPI RGGWCCY 1 cut(s) 1716
PsuI RGATCY 1 cut(s) 1919
PsyI GACNNNGTC 1 cut(s) 514
PvuII CAGCTG 3 cut(s) 368, 1829, 2008
RsaI GTAC 7 cut(s) 307, 318, 433, 478, 730, 1786, 1991
RsaNI GTAC 7 cut(s) 306, 317, 432, 477, 729, 1785, 1990
RseI CAYNNNNRTG 6 cut(s) 212, 918, 1532, 1734, 1821, 1848
SaqAI TTAA 7 cut(s) 501, 608, 954, 1077, 1655, 2187, 2322
SatI GCNGC 5 cut(s) 994, 997, 1794, 1827, 2367
Sau96I GGNCC 5 cut(s) 637, 638, 1024, 1716, 1925
ScaI AGTACT 2 cut(s) 433, 478
SchI GAGTC 6 cut(s) 33, 161, 476, 1073, 1199, 1507
ScrFI CCNGG 3 cut(s) 508, 794, 908
SduI GDGCHC 3 cut(s) 641, 913, 1058
SfaNI GCATC 6 cut(s) 115, 782, 1096, 2233, 2344, 2482
SfcI CTRYAG 2 cut(s) 1110, 1357
SfuI TTCGAA 1 cut(s) 1742
SinI GGWCC 2 cut(s) 1716, 1925
SmiMI CAYNNNNRTG 6 cut(s) 212, 918, 1532, 1734, 1821, 1848
SmlI CTYRAG 3 cut(s) 349, 1720, 2051
SmoI CTYRAG 3 cut(s) 349, 1720, 2051
SpeI ACTAGT 3 cut(s) 434, 593, 1690
SsiI CCGC 1 cut(s) 1639
SspI AATATT 1 cut(s) 1146
SspMI CTAG 9 cut(s) 258, 435, 594, 837, 894, 1059, 1139, 1691, 2193
StyD4I CCNGG 3 cut(s) 506, 792, 906
StyI CCWWGG 2 cut(s) 1585, 2262
TaaI ACNGT 7 cut(s) 301, 405, 495, 1114, 1667, 1847, 2221
TaiI ACGT 1 cut(s) 1503
TaqI TCGA 4 cut(s) 170, 1283, 1742, 1932
TatI WGTACW 4 cut(s) 431, 476, 1784, 1989
TfiI GAWTC 7 cut(s) 386, 1399, 1408, 1630, 1739, 1836, 2165
Tru1I TTAA 7 cut(s) 501, 608, 954, 1077, 1655, 2187, 2322
Tru9I TTAA 7 cut(s) 501, 608, 954, 1077, 1655, 2187, 2322
TscAI CASTG 7 cut(s) 274, 304, 408, 424, 838, 1390, 2205
TseFI GTSAC 3 cut(s) 920, 1242, 1326
TseI GCWGC 5 cut(s) 993, 996, 1793, 1826, 2366
Tsp45I GTSAC 3 cut(s) 920, 1242, 1326
TspGWI ACGGA 3 cut(s) 692, 765, 1359
TspRI CASTG 7 cut(s) 274, 304, 408, 424, 838, 1390, 2205
Tth111I GACNNNGTC 1 cut(s) 514
VpaK11BI GGWCC 2 cut(s) 1716, 1925
XapI RAATTY 9 cut(s) 6, 154, 172, 542, 1437, 1598, 1779, 2107, 2466
XcmI CCANNNNNNNNNTGG 3 cut(s) 158, 1201, 2483
XmnI GAANNNNTTC 2 cut(s) 9, 413
XspI CTAG 9 cut(s) 258, 435, 594, 837, 894, 1059, 1139, 1691, 2193
ZrmI AGTACT 2 cut(s) 433, 478
Zsp2I ATGCAT 2 cut(s) 1126, 2296
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.