Rroxscaffold_2G00136770

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000413
Physical Location & Seq
Forward (+)
74454563 .. 74463785
9223 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00136770.1

Sequence Viewer

Length: 1875 bp
ATGTTGGGGGGCCCTTCACAAAATGATACATTCTGGAGAAGCTGGGAAACAGATGACACTTACCTGCCTGATCCAAACTCTGCTAAGGATAGCAACAAAGGTATCCTCAATAGGAATTACGTCGGAGAAATTGATGGTTTGGTTGCATCTATGCCGTCTGTTGCCCCAGATTGGGTTTACCAGACTGCTAAAGTGATGAATATCACTGCTAGCAGGCCAGCCAATTCCTCCAACATAACTTGGTCTTTTAGAGTGAGTGGGAATGCTAGACACATTGTCCGGGCTCACTTCTGTGACATTGTTGGTCAGCCTTCTACTGTTGTATTTAACTTGTATTCAAATGGCAACTTGCGCAAGGAGATTGGTAGCATCAATAACACGATTTCTCAACATCCGGCCCTTCCTTTCTACTATGATTTTATGGTGAGTCCTAGTGAGTCTGAACTCATTAACATCAGCATAAGACCTAACTTGGAAGATGCTACAGATCCGAATGCATTTCTAAATGGGCTAGAAATATTGGAGATAATGGAGGGTGTAGCTTCAATTCCTAATGTGAAAGAGTCCAAGAAGAATATGGTGGCTCTTGTTGTTGGTTCAGTTCTTGGAGGCTTGTCACTCATCTGCATTTTAGTAGCTGGATTTGTGTTCCGTTCGAGACACAGAAAGGCAGAAAAGCGAGTTGAAATTGCAGATTGGTCACCAATGCTTGAAAATGGAGGGAGCTCCTACAGCAGAGGGACCGAAAGAACCATCACTGCATCGCCTATGAATCTAATGAATCTTGGGTTGAAGATACCTCTTGCTGAAATTCAGTCTGCAACAAACAAATTTGACACCAAATTGATGATAGGTAAGGGTGGCTTCGGGAATGTTTATAGAGGGACTTTATATAATGGCACAAAAGTGGCTGTAAAGCGAGCTTATAAGCGAGATGAGCATGGGTCAGGATCAGGCCAAGGCCGTCCAGAATTTCAAACAGAGATTATGGTGTTGTCCAAGATTCGCCACCGCCATCTTGTGTCCTTAATTGGTTACTGTGATGAAAGGTCTGAGATGATACTAGTGTATGAGTTCATGGAAAAAGGGACGTTGAGAGATCATTTGTATGATTCGGATGTGCCTCACTTGTCATGGAAGCAAAGACTTGAAATTTGTACTGGTGCAGCAAGGGGTCTTCATTATCTCCACACAGGTGCAGCTGGGGGAATCATTCACCGTGATGTCAAGTCCACCAACATATTGCTTGATGCAAACCATGTTGCCAAAGTTGCTGACTTTGGCCTTTCGAGATCTGGAGCTCTCGATGAAACGCATGTCAGCACTAATGTTAAAGGCACTTTCGGTTATCTTGATCCTGAGTACATGATGTCTGAACAGTTGACAGAAAAATCTGATGTTTACTCATTTGGTGTAGTTCTACTTGAAGTGTTGTGTGCAAGACCAGCTATTGATCCAACACTTCCAAGAGAGCAAATGAACTTAGCTGAATGGGGAATGCTTTGCCAGAAAAGAGGGGTGCTTGAAGAGATTGTTGATTCTCCACTAAAGGGTCAGATTGATCCAAACTCACTGCGTAAGTTTGGTGAGACGGTTGAGAAGTGTTTGCAAGAAGATGCTTGTGATAGGCCAACAATGGCTGATGTGCTGTGGGATTTGGAGTATGCATTACAGCTTCAGCAAACAACAAAGCTTAAAGAGGCTCATGAGGACAGCACAAACATTGATGCTTCATCAGCAGCATTCGCTTTGCCAAATGTTCAGCGTTTTCCTTCACTTGGTTCGACGAGGAATGGAGATAATATCAGGGAAGCTGACTTGGAGACAACAGAAAGTGAAATTTTCTCTCAATTGAAAATTGGTGATGCCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

624

Amino Acids

69.14

Weight (kDa)

5.69

Isoelectric Point (pI)

46.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 281 - 550 1.2e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 282 - 551 4.9e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000413)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23200
fragaria_vesca FvH4_1g16860 FvH4_1g16861
malus_domestica MD02G1018900.v1.1 MD15G1289500.v1.1 MD15G1289600.v1.1 MD15G1289700.v1.1
prunus_persica Prupe.6G227800_v2.0.a1 Prupe.6G228000_v2.0.a1 Prupe.6G228100_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228300_v2.0.a1
pyrus_communis pycom02g01680 pycom02g01690 pycom15g25310 pycom15g25330 pycom15g25340
rosa_chinensis RchiOBHm_Chr1g0324321 RchiOBHm_Chr1g0324331 RchiOBHm_Chr1g0324341 RchiOBHm_Chr1g0324401 RchiOBHm_Chr1g0324441 RchiOBHm_Chr2g0106751 RchiOBHm_Chr2g0106761 RchiOBHm_Chr2g0106771 RchiOBHm_Chr2g0106781 RchiOBHm_Chr2g0106801 RchiOBHm_Chr2g0106811 RchiOBHm_Chr2g0106821
rosa_laevigata RLG00000017539 RLG00000017540 RLG00000017541 RLG00000030200 RLG00000030201
rosa_multiflora Rmu_sc0000751.1_g000001 Rmu_sc0000751.1_g000002 Rmu_sc0000751.1_g000003 Rmu_sc0000751.1_g000005 Rmu_sc0000751.1_g000007 Rmu_sc0000751.1_g000008 Rmu_sc0000751.1_g000018 Rmu_sc0000751.1_g000019 Rmu_sc0000751.1_g000026 Rmu_sc0000751.1_g000027 Rmu_sc0000751.1_g000028 Rmu_sc0000751.1_g000029 Rmu_sc0003410.1_g000012 Rmu_sc0004000.1_g000023 Rmu_sc0004000.1_g000024 Rmu_sc0004082.1_g000015 Rmu_sc0004082.1_g000017 Rmu_sc0026507.1_g000001 Rmu_sc0031196.1_g000001 Rmu_sc0039591.1_g000001
rosa_roxburghii Rroxscaffold_159G00432710 Rroxscaffold_159G00432780 Rroxscaffold_159G00432840 Rroxscaffold_159G00433010 Rroxscaffold_2G00098070 Rroxscaffold_2G00136770 Rroxscaffold_4G00325540 Rroxscaffold_4G00325630 Rroxscaffold_4G00325680
rosa_rugosa Rorug01G0045700 Rorug02G0138500 Rorug02G0138600 Rorug02G0138700 Rorug02G0138800 Rorug02G0138900
rosa_samantha Rh1AG061400 Rh1BG052300 Rh1CG063400 Rh1CG063700 Rh1DG067800 Rh2AG189400 Rh2AG189800 Rh2AG190000 Rh2AG190100 Rh2BG201100 Rh2BG201300 Rh2CG194500 Rh2CG194600 Rh2CG194700 Rh2DG195700 Rh2DG195900 Rh2DG196300 Rh2DG196400 Rh2DG196500 Rh2DG196600
rosa_wichuraiana Rw1G004230 Rw1G005210 Rw2G014900 Rw2G014910 Rw2G014930 Rw2G014940 Rw2G014950 Rw2G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 927
Acc16I TGCGCA 1 cut(s) 353
Acc36I ACCTGC 1 cut(s) 72
AciI CCGC 1 cut(s) 1012
AclWI GGATC 6 cut(s) 65, 482, 958, 1349, 1448, 1556
AcsI RAATTY 5 cut(s) 810, 830, 971, 1152, 1839
AcuI CTGAAG 1 cut(s) 1661
AfaI GTAC 2 cut(s) 1159, 1364
AfiI CCNNNNNNNGG 4 cut(s) 171, 172, 1550, 1778
AhdI GACNNNNNGTC 1 cut(s) 275
AhlI ACTAGT 1 cut(s) 1063
AleI CACNNNNGTG 3 cut(s) 291, 905, 1194
Alw21I GWGCWC 2 cut(s) 728, 1303
Alw26I GTCTC 3 cut(s) 652, 1583, 1817
AlwI GGATC 6 cut(s) 65, 482, 958, 1349, 1448, 1556
AoxI GGCC 7 cut(s) 10, 215, 396, 955, 961, 1282, 1628
ApaI GGGCCC 1 cut(s) 14
ApeKI GCWGC 3 cut(s) 1166, 1199, 1739
ApoI RAATTY 5 cut(s) 810, 830, 971, 1152, 1839
ArsI GACNNNNNNTTYG 2 cut(s) 1137, 1169
AspLEI GCGC 1 cut(s) 354
AspS9I GGNCC 4 cut(s) 10, 11, 397, 741
AsuC2I CCSGG 1 cut(s) 281
AsuHPI GGTGA 5 cut(s) 436, 693, 1208, 1598, 1874
AsuNHI GCTAGC 1 cut(s) 209
AvaII GGWCC 1 cut(s) 741
BaeGI GKGCMC 1 cut(s) 14
BaeI ACNNNNGTAYC 4 cut(s) 85, 118, 1052, 1085
BanII GRGCYC 4 cut(s) 14, 286, 728, 1303
BbsI GAAGAC 1 cut(s) 1169
Bbv12I GWGCWC 2 cut(s) 728, 1303
BbvI GCAGC 3 cut(s) 1178, 1211, 1751
BccI CCATC 3 cut(s) 128, 761, 1023
BceAI ACGGC 2 cut(s) 139, 948
BciVI GTATCC 1 cut(s) 113
BcnI CCSGG 1 cut(s) 281
BcoDI GTCTC 3 cut(s) 652, 1583, 1817
BcuI ACTAGT 1 cut(s) 1063
BfaI CTAG 5 cut(s) 210, 267, 432, 512, 1064
BfmI CTRYAG 2 cut(s) 483, 730
BfuAI ACCTGC 1 cut(s) 72
BfuI GTATCC 1 cut(s) 113
BglII AGATCT 1 cut(s) 1292
BisI GCNGC 3 cut(s) 1167, 1200, 1740
BlsI GCNGC 3 cut(s) 1168, 1201, 1741
Bme1390I CCNGG 1 cut(s) 281
Bme18I GGWCC 1 cut(s) 741
BmeRI GACNNNNNGTC 1 cut(s) 275
BmgT120I GGNCC 4 cut(s) 10, 11, 397, 741
BmiI GGNNCC 3 cut(s) 11, 12, 742
BmrFI CCNGG 1 cut(s) 281
BmsI GCATC 8 cut(s) 155, 378, 469, 770, 1240, 1606, 1717, 1855
BmtI GCTAGC 1 cut(s) 213
BpiI GAAGAC 1 cut(s) 1169
BpmI CTGGAG 2 cut(s) 55, 1317
Bpu10I CCTNAGC 1 cut(s) 84
BpuMI CCSGG 1 cut(s) 281
BsaBI GATNNNNATC 1 cut(s) 200
BsaJI CCNNGG 1 cut(s) 958
Bsc4I CCNNNNNNNGG 4 cut(s) 171, 172, 1550, 1778
Bse1I ACTGG 1 cut(s) 1165
Bse8I GATNNNNATC 1 cut(s) 200
BseDI CCNNGG 1 cut(s) 958
BseGI GGATG 2 cut(s) 391, 1123
BseJI GATNNNNATC 1 cut(s) 200
BseLI CCNNNNNNNGG 4 cut(s) 171, 172, 1550, 1778
BseMII CTCAG 2 cut(s) 1044, 1350
BseNI ACTGG 1 cut(s) 1165
BseSI GKGCMC 1 cut(s) 14
BseXI GCAGC 3 cut(s) 1178, 1211, 1751
BseYI CCCAGC 2 cut(s) 42, 1202
BsgI GTGCAG 2 cut(s) 1185, 1218
BshFI GGCC 7 cut(s) 12, 217, 398, 957, 963, 1284, 1630
BsiHKAI GWGCWC 2 cut(s) 728, 1303
BsiSI CCGG 2 cut(s) 280, 395
BslFI GGGAC 3 cut(s) 754, 898, 1102
BslI CCNNNNNNNGG 4 cut(s) 171, 172, 1550, 1778
BsmAI GTCTC 3 cut(s) 652, 1583, 1817
BsmBI CGTCTC 1 cut(s) 1583
BsmFI GGGAC 3 cut(s) 754, 898, 1102
BsmI GAATGC 4 cut(s) 268, 499, 1503, 1742
BsnI GGCC 7 cut(s) 12, 217, 398, 957, 963, 1284, 1630
Bsp120I GGGCCC 1 cut(s) 10
Bsp1286I GDGCHC 4 cut(s) 14, 286, 728, 1303
Bsp143I GATC 8 cut(s) 70, 487, 950, 1099, 1292, 1354, 1453, 1561
BspACI CCGC 1 cut(s) 1012
BspANI GGCC 7 cut(s) 12, 217, 398, 957, 963, 1284, 1630
BspCNI CTCAG 2 cut(s) 1045, 1351
BspHI TCATGA 1 cut(s) 1705
BspLI GGNNCC 3 cut(s) 11, 12, 742
BspMI ACCTGC 1 cut(s) 72
BspOI GCTAGC 1 cut(s) 213
BspPI GGATC 6 cut(s) 65, 482, 958, 1349, 1448, 1556
BsrI ACTGG 1 cut(s) 1165
BssECI CCNNGG 1 cut(s) 958
BssMI GATC 8 cut(s) 70, 487, 950, 1099, 1292, 1354, 1453, 1561
BssT1I CCWWGG 1 cut(s) 958
Bst4CI ACNGT 5 cut(s) 319, 1040, 1220, 1380, 1594
Bst6I CTCTTC 1 cut(s) 1521
BstC8I GCNNGC 4 cut(s) 211, 215, 219, 921
BstDEI CTNAG 4 cut(s) 84, 1053, 1359, 1483
BstEII GGTNACC 1 cut(s) 699
BstF5I GGATG 2 cut(s) 391, 1123
BstHHI GCGC 1 cut(s) 354
BstKTI GATC 8 cut(s) 73, 490, 953, 1102, 1295, 1357, 1456, 1564
BstMAI GTCTC 3 cut(s) 652, 1583, 1817
BstMBI GATC 8 cut(s) 70, 487, 950, 1099, 1292, 1354, 1453, 1561
BstMWI GCNNNNNNNGC 7 cut(s) 351, 732, 937, 1271, 1445, 1736, 1745
BstNSI RCATGY 1 cut(s) 1319
BstPI GGTNACC 1 cut(s) 699
BstSCI CCNGG 1 cut(s) 279
BstSFI CTRYAG 2 cut(s) 483, 730
BstSLI GKGCMC 1 cut(s) 14
BstV1I GCAGC 3 cut(s) 1178, 1211, 1751
BstV2I GAAGAC 1 cut(s) 1169
BstX2I RGATCY 2 cut(s) 487, 1292
BstYI RGATCY 2 cut(s) 487, 1292
BsuI GTATCC 1 cut(s) 113
BsuRI GGCC 7 cut(s) 12, 217, 398, 957, 963, 1284, 1630
BtgZI GCGATG 1 cut(s) 747
BtsCI GGATG 2 cut(s) 391, 1123
BtsI GCAGTG 3 cut(s) 204, 756, 1571
BtsIMutI CAGTG 3 cut(s) 204, 756, 1571
BveI ACCTGC 1 cut(s) 72
Cac8I GCNNGC 4 cut(s) 211, 215, 219, 921
CciI TCATGA 1 cut(s) 1705
CfoI GCGC 1 cut(s) 354
Cfr13I GGNCC 4 cut(s) 10, 11, 397, 741
Csp6I GTAC 2 cut(s) 1158, 1363
CviAII CATG 7 cut(s) 941, 1078, 1134, 1259, 1316, 1366, 1706
CviQI GTAC 2 cut(s) 1158, 1363
DdeI CTNAG 4 cut(s) 84, 1053, 1359, 1483
DpnI GATC 8 cut(s) 72, 489, 952, 1101, 1294, 1356, 1455, 1563
DpnII GATC 8 cut(s) 70, 487, 950, 1099, 1292, 1354, 1453, 1561
DriI GACNNNNNGTC 1 cut(s) 275
Eam1104I CTCTTC 1 cut(s) 1521
Eam1105I GACNNNNNGTC 1 cut(s) 275
EarI CTCTTC 1 cut(s) 1521
Ecl136II GAGCTC 2 cut(s) 726, 1301
Eco130I CCWWGG 1 cut(s) 958
Eco24I GRGCYC 4 cut(s) 14, 286, 728, 1303
Eco47I GGWCC 1 cut(s) 741
Eco53kI GAGCTC 2 cut(s) 726, 1301
Eco57I CTGAAG 1 cut(s) 1661
Eco91I GGTNACC 1 cut(s) 699
EcoICRI GAGCTC 2 cut(s) 726, 1301
EcoO109I RGGNCCY 2 cut(s) 10, 11
EcoO65I GGTNACC 1 cut(s) 699
EcoT14I CCWWGG 1 cut(s) 958
EcoT22I ATGCAT 2 cut(s) 499, 1669
EcoT38I GRGCYC 4 cut(s) 14, 286, 728, 1303
ErhI CCWWGG 1 cut(s) 958
Esp3I CGTCTC 1 cut(s) 1583
FaeI CATG 7 cut(s) 944, 1081, 1137, 1262, 1319, 1369, 1709
FalI AAGNNNNNCTT 2 cut(s) 848, 880
FaqI GGGAC 3 cut(s) 754, 898, 1102
FatI CATG 7 cut(s) 940, 1077, 1133, 1258, 1315, 1365, 1705
Fnu4HI GCNGC 3 cut(s) 1167, 1200, 1740
FokI GGATG 2 cut(s) 378, 1130
FriOI GRGCYC 4 cut(s) 14, 286, 728, 1303
Fsp4HI GCNGC 3 cut(s) 1167, 1200, 1740
FspBI CTAG 5 cut(s) 210, 267, 432, 512, 1064
FspI TGCGCA 1 cut(s) 353
GlaI GCGC 1 cut(s) 353
GluI GCNGC 3 cut(s) 1167, 1200, 1740
GsaI CCCAGC 2 cut(s) 46, 1206
GsuI CTGGAG 2 cut(s) 55, 1317
HaeIII GGCC 7 cut(s) 12, 217, 398, 957, 963, 1284, 1630
HapII CCGG 2 cut(s) 280, 395
HhaI GCGC 1 cut(s) 354
Hin1II CATG 7 cut(s) 944, 1081, 1137, 1262, 1319, 1369, 1709
Hin6I GCGC 1 cut(s) 352
HinP1I GCGC 1 cut(s) 352
HincII GTYRAC 1 cut(s) 1383
HindII GTYRAC 1 cut(s) 1383
HindIII AAGCTT 1 cut(s) 1691
HinfI GANTC 9 cut(s) 427, 437, 563, 772, 781, 1003, 1112, 1209, 1538
HpaII CCGG 2 cut(s) 280, 395
HphI GGTGA 5 cut(s) 436, 693, 1208, 1598, 1874
Hpy166II GTNNAC 4 cut(s) 178, 1233, 1383, 1402
Hpy188I TCNGA 8 cut(s) 125, 442, 492, 1054, 1117, 1375, 1396, 1557
Hpy8I GTNNAC 4 cut(s) 178, 1233, 1383, 1402
Hpy99I CGWCG 2 cut(s) 125, 1789
HpyAV CCTTC 4 cut(s) 24, 321, 410, 1782
HpyCH4III ACNGT 5 cut(s) 319, 1040, 1220, 1380, 1594
HpyCH4IV ACGT 2 cut(s) 120, 1091
HpyF10VI GCNNNNNNNGC 7 cut(s) 351, 732, 937, 1271, 1445, 1736, 1745
HpyF3I CTNAG 4 cut(s) 84, 1053, 1359, 1483
HpySE526I ACGT 2 cut(s) 120, 1091
Hsp92II CATG 7 cut(s) 944, 1081, 1137, 1262, 1319, 1369, 1709
HspAI GCGC 1 cut(s) 352
Kzo9I GATC 8 cut(s) 70, 487, 950, 1099, 1292, 1354, 1453, 1561
LmnI GCTCC 3 cut(s) 723, 731, 1298
Lsp1109I GCAGC 3 cut(s) 1178, 1211, 1751
LweI GCATC 8 cut(s) 155, 378, 469, 770, 1240, 1606, 1717, 1855
MaeI CTAG 5 cut(s) 210, 267, 432, 512, 1064
MaeII ACGT 2 cut(s) 120, 1091
MaeIII GTNAC 4 cut(s) 293, 615, 699, 1034
MalI GATC 8 cut(s) 72, 489, 952, 1101, 1294, 1356, 1455, 1563
MboI GATC 8 cut(s) 70, 487, 950, 1099, 1292, 1354, 1453, 1561
MboII GAAGA 6 cut(s) 488, 583, 805, 1169, 1538, 1625
MfeI CAATTG 1 cut(s) 1850
MflI RGATCY 2 cut(s) 487, 1292
MhlI GDGCHC 4 cut(s) 14, 286, 728, 1303
MlyI GAGTC 3 cut(s) 436, 446, 572
MmeI TCCRAC 3 cut(s) 103, 255, 1481
Mph1103I ATGCAT 2 cut(s) 499, 1669
MseI TTAA 5 cut(s) 327, 450, 1028, 1332, 1695
MslI CAYNNNNRTG 5 cut(s) 291, 905, 1107, 1194, 1221
MspA1I CMGCKG 1 cut(s) 1202
MspI CCGG 2 cut(s) 280, 395
MspR9I CCNGG 1 cut(s) 281
MunI CAATTG 1 cut(s) 1850
Mva1269I GAATGC 4 cut(s) 268, 499, 1503, 1742
MwoI GCNNNNNNNGC 7 cut(s) 351, 732, 937, 1271, 1445, 1736, 1745
NciI CCSGG 1 cut(s) 281
NdeII GATC 8 cut(s) 70, 487, 950, 1099, 1292, 1354, 1453, 1561
NheI GCTAGC 1 cut(s) 209
NlaIII CATG 7 cut(s) 944, 1081, 1137, 1262, 1319, 1369, 1709
NlaIV GGNNCC 3 cut(s) 11, 12, 742
NmuCI GTSAC 3 cut(s) 293, 615, 699
NsbI TGCGCA 1 cut(s) 353
NsiI ATGCAT 2 cut(s) 499, 1669
NspI RCATGY 1 cut(s) 1319
OliI CACNNNNGTG 3 cut(s) 291, 905, 1194
PagI TCATGA 1 cut(s) 1705
PctI GAATGC 4 cut(s) 268, 499, 1503, 1742
PfeI GAWTC 6 cut(s) 772, 781, 1003, 1112, 1209, 1538
PkrI GCNGC 3 cut(s) 1168, 1201, 1741
PleI GAGTC 3 cut(s) 435, 445, 571
PpsI GAGTC 3 cut(s) 435, 445, 571
PsiI TTATAA 1 cut(s) 927
Psp124BI GAGCTC 2 cut(s) 728, 1303
PspEI GGTNACC 1 cut(s) 699
PspFI CCCAGC 2 cut(s) 42, 1202
PspN4I GGNNCC 3 cut(s) 11, 12, 742
PspOMI GGGCCC 1 cut(s) 10
PspPI GGNCC 4 cut(s) 10, 11, 397, 741
PsuI RGATCY 2 cut(s) 487, 1292
PvuII CAGCTG 1 cut(s) 1202
RsaI GTAC 2 cut(s) 1159, 1364
RsaNI GTAC 2 cut(s) 1158, 1363
RseI CAYNNNNRTG 5 cut(s) 291, 905, 1107, 1194, 1221
SacI GAGCTC 2 cut(s) 728, 1303
SaqAI TTAA 5 cut(s) 327, 450, 1028, 1332, 1695
SatI GCNGC 3 cut(s) 1167, 1200, 1740
Sau3AI GATC 8 cut(s) 70, 487, 950, 1099, 1292, 1354, 1453, 1561
Sau96I GGNCC 4 cut(s) 10, 11, 397, 741
SchI GAGTC 3 cut(s) 436, 446, 572
ScrFI CCNGG 1 cut(s) 281
SduI GDGCHC 4 cut(s) 14, 286, 728, 1303
SfaNI GCATC 8 cut(s) 155, 378, 469, 770, 1240, 1606, 1717, 1855
SfcI CTRYAG 2 cut(s) 483, 730
SinI GGWCC 1 cut(s) 741
SmiMI CAYNNNNRTG 5 cut(s) 291, 905, 1107, 1194, 1221
SpeI ACTAGT 1 cut(s) 1063
SsiI CCGC 1 cut(s) 1012
SspI AATATT 1 cut(s) 519
SspMI CTAG 5 cut(s) 210, 267, 432, 512, 1064
SstI GAGCTC 2 cut(s) 728, 1303
StyD4I CCNGG 1 cut(s) 279
StyI CCWWGG 1 cut(s) 958
TaaI ACNGT 5 cut(s) 319, 1040, 1220, 1380, 1594
TaiI ACGT 2 cut(s) 123, 1094
TaqI TCGA 4 cut(s) 656, 1289, 1305, 1784
TaqII GACCGA 1 cut(s) 758
TatI WGTACW 2 cut(s) 1157, 1362
TfiI GAWTC 6 cut(s) 772, 781, 1003, 1112, 1209, 1538
Tru1I TTAA 5 cut(s) 327, 450, 1028, 1332, 1695
Tru9I TTAA 5 cut(s) 327, 450, 1028, 1332, 1695
TscAI CASTG 3 cut(s) 211, 763, 1578
TseFI GTSAC 3 cut(s) 293, 615, 699
TseI GCWGC 3 cut(s) 1166, 1199, 1739
Tsp45I GTSAC 3 cut(s) 293, 615, 699
TspDTI ATGAA 9 cut(s) 212, 785, 794, 1059, 1066, 1169, 1323, 1493, 1722
TspGWI ACGGA 1 cut(s) 641
TspRI CASTG 3 cut(s) 211, 763, 1578
VpaK11BI GGWCC 1 cut(s) 741
XapI RAATTY 5 cut(s) 810, 830, 971, 1152, 1839
XceI RCATGY 1 cut(s) 1319
XcmI CCANNNNNNNNNTGG 1 cut(s) 574
XspI CTAG 5 cut(s) 210, 267, 432, 512, 1064
Zsp2I ATGCAT 2 cut(s) 499, 1669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.