Rmu_sc0000751.1_g000027

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000751.1
OG0000413
Physical Location & Seq
Reverse (-)
59555 .. 61036
1482 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000751.1_g000027.1.cds

Sequence Viewer

Length: 1482 bp
atggaaaatcctcataattgtagaaccctccatatccttttgttttctcagcttgttcttctccttcagttctcatcccttcactttctctctttagcttatgaagtccaagaaaagtatttcgtcaattgtggatcagatgctaatctggacctcaatggtcggaatttcattggggatttgaagcctgattccttctctttctcaaagggaagtgagactatcaaaggcaccaaccttacgatatcaagtctctaccagacagcaagagttttcagtcaacaatcctactacaatttcgaaatcactgaaactggtacttatctggtacgcctgcacttctttcccttttcttcggcctcaagtaatctttctactggcatttttgatgtttcggattccaagttcactctgttgaacaatttcactgccaagattaatagtactagcaactctgctataataaaggaattctttcttggaattaatagcaccgactcatttaaactatattttacacctcaagcatcatcttttgcttttgtaaacgccattgaagtcttccttgcaccttcaaatttcacccctaagaattacaacagtaatcttcctttacacacaacttaccgagtgaatgttggaggcccagtgctctcaccagataatgacgtcacaatatggagaaactgggaaaaagattatatttatctgtctgatcccaactctgccaaagatgtccctaaccaaaatacccagcttaattatacgtactataataaggatcaagctgatgattttgttgcatctactaattttattgccccggatttggtttaccagacagctaaagagatgactggcaattcctccaacataacatggtcatttagtgtgagcaggaatgctaggtacattgtccgtgtacacttctgtgacattgtttctgattcccctcatactatagtgtttgatttgtattcgaatggcaacttcagtaagcagatctttggactgaattccccttttgttcaatcgttggctactcctttctactatgattttgtggtgaatgctactgattctaaactcattaacatcaggatagcccctgacttgaacaatacaacaataaaaaatgcctttctgaatgggctggaaatattggagatattggagggaacagctctaatttataatttggaagagtccaagaaggtaagtgtggctcttgtggttggatcagttctcggaggaggcctgtttcttttcatcattggattcatgttgtgtttgagacacaaaaaggcgagaaagaggaacagaggagggatttcccacaaccttgggttgaagatatcttttgctcaaatccggtctgcaacaaacaactttgatccgaaaatgcagataggtgtgggtggttttgggtatgtttataaaggctgctgcacctttatggagataatcaagtccagttgctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

493

Amino Acids

55.26

Weight (kDa)

7.59

Isoelectric Point (pI)

32.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000413)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23200
fragaria_vesca FvH4_1g16860 FvH4_1g16861
malus_domestica MD02G1018900.v1.1 MD15G1289500.v1.1 MD15G1289600.v1.1 MD15G1289700.v1.1
prunus_persica Prupe.6G227800_v2.0.a1 Prupe.6G228000_v2.0.a1 Prupe.6G228100_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228300_v2.0.a1
pyrus_communis pycom02g01680 pycom02g01690 pycom15g25310 pycom15g25330 pycom15g25340
rosa_chinensis RchiOBHm_Chr1g0324321 RchiOBHm_Chr1g0324331 RchiOBHm_Chr1g0324341 RchiOBHm_Chr1g0324401 RchiOBHm_Chr1g0324441 RchiOBHm_Chr2g0106751 RchiOBHm_Chr2g0106761 RchiOBHm_Chr2g0106771 RchiOBHm_Chr2g0106781 RchiOBHm_Chr2g0106801 RchiOBHm_Chr2g0106811 RchiOBHm_Chr2g0106821
rosa_laevigata RLG00000017539 RLG00000017540 RLG00000017541 RLG00000030200 RLG00000030201
rosa_multiflora Rmu_sc0000751.1_g000001 Rmu_sc0000751.1_g000002 Rmu_sc0000751.1_g000003 Rmu_sc0000751.1_g000005 Rmu_sc0000751.1_g000007 Rmu_sc0000751.1_g000008 Rmu_sc0000751.1_g000018 Rmu_sc0000751.1_g000019 Rmu_sc0000751.1_g000026 Rmu_sc0000751.1_g000027 Rmu_sc0000751.1_g000028 Rmu_sc0000751.1_g000029 Rmu_sc0003410.1_g000012 Rmu_sc0004000.1_g000023 Rmu_sc0004000.1_g000024 Rmu_sc0004082.1_g000015 Rmu_sc0004082.1_g000017 Rmu_sc0026507.1_g000001 Rmu_sc0031196.1_g000001 Rmu_sc0039591.1_g000001
rosa_roxburghii Rroxscaffold_159G00432710 Rroxscaffold_159G00432780 Rroxscaffold_159G00432840 Rroxscaffold_159G00433010 Rroxscaffold_2G00098070 Rroxscaffold_2G00136770 Rroxscaffold_4G00325540 Rroxscaffold_4G00325630 Rroxscaffold_4G00325680
rosa_rugosa Rorug01G0045700 Rorug02G0138500 Rorug02G0138600 Rorug02G0138700 Rorug02G0138800 Rorug02G0138900
rosa_samantha Rh1AG061400 Rh1BG052300 Rh1CG063400 Rh1CG063700 Rh1DG067800 Rh2AG189400 Rh2AG189800 Rh2AG190000 Rh2AG190100 Rh2BG201100 Rh2BG201300 Rh2CG194500 Rh2CG194600 Rh2CG194700 Rh2DG195700 Rh2DG195900 Rh2DG196300 Rh2DG196400 Rh2DG196500 Rh2DG196600
rosa_wichuraiana Rw1G004230 Rw1G005210 Rw2G014900 Rw2G014910 Rw2G014930 Rw2G014940 Rw2G014950 Rw2G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1194, 1437
AatII GACGTC 1 cut(s) 672
AccB1I GGYRCC 1 cut(s) 230
AclWI GGATC 5 cut(s) 142, 710, 789, 1246, 1388
AcsI RAATTY 4 cut(s) 166, 470, 577, 1015
AcuI CTGAAG 2 cut(s) 50, 976
AcyI GRCGYC 1 cut(s) 669
AfaI GTAC 6 cut(s) 319, 330, 445, 770, 911, 924
AfiI CCNNNNNNNGG 1 cut(s) 829
AgsI TTSAA 7 cut(s) 184, 418, 557, 576, 1031, 1117, 1351
AjuI GAANNNNNNNTTGG 2 cut(s) 462, 494
AleI CACNNNNGTG 1 cut(s) 930
AloI GAACNNNNNNTCC 2 cut(s) 389, 421
AluBI AGCT 6 cut(s) 52, 98, 757, 788, 845, 1184
AluI AGCT 6 cut(s) 52, 98, 757, 788, 845, 1184
Alw21I GWGCWC 1 cut(s) 654
Alw26I GTCTC 3 cut(s) 212, 257, 1288
AlwI GGATC 5 cut(s) 142, 710, 789, 1246, 1388
AlwNI CAGNNNCTG 1 cut(s) 1479
AoxI GGCC 3 cut(s) 357, 643, 1255
ApeKI GCWGC 2 cut(s) 1443, 1446
ApoI RAATTY 4 cut(s) 166, 470, 577, 1015
AseI ATTAAT 2 cut(s) 438, 486
Asp700I GAANNNNTTC 2 cut(s) 422, 474
AspS9I GGNCC 2 cut(s) 151, 644
AsuC2I CCSGG 1 cut(s) 824
AsuHPI GGTGA 3 cut(s) 574, 648, 1078
AsuII TTCGAA 2 cut(s) 300, 980
AvaII GGWCC 1 cut(s) 151
BanI GGYRCC 1 cut(s) 230
BbsI GAAGAC 1 cut(s) 553
Bbv12I GWGCWC 1 cut(s) 654
BbvI GCAGC 2 cut(s) 1430, 1433
BcnI CCSGG 1 cut(s) 824
BcoDI GTCTC 3 cut(s) 212, 257, 1288
BfaI CTAG 2 cut(s) 447, 906
BfmI CTRYAG 1 cut(s) 960
BglII AGATCT 1 cut(s) 1002
BisI GCNGC 2 cut(s) 1444, 1447
BlsI GCNGC 2 cut(s) 1445, 1448
BmcAI AGTACT 1 cut(s) 445
Bme1390I CCNGG 1 cut(s) 824
Bme18I GGWCC 1 cut(s) 151
BmgT120I GGNCC 2 cut(s) 151, 644
BmiI GGNNCC 1 cut(s) 232
BmrFI CCNGG 1 cut(s) 824
BmrI ACTGGG 2 cut(s) 641, 697
BmsI GCATC 3 cut(s) 130, 536, 812
BmuI ACTGGG 2 cut(s) 641, 697
BpiI GAAGAC 1 cut(s) 553
Bpu14I TTCGAA 2 cut(s) 300, 980
BpuEI CTTGAG 2 cut(s) 346, 507
BpuMI CCSGG 1 cut(s) 824
BsaAI YACGTR 1 cut(s) 768
BsaBI GATNNNNATC 1 cut(s) 144
BsaHI GRCGYC 1 cut(s) 669
BsaJI CCNNGG 2 cut(s) 822, 1342
BsaWI WCCGGW 1 cut(s) 1371
BsaXI ACNNNNNCTCC 2 cut(s) 633, 663
Bsc4I CCNNNNNNNGG 1 cut(s) 829
Bse1I ACTGG 6 cut(s) 319, 382, 647, 692, 862, 1473
Bse8I GATNNNNATC 1 cut(s) 144
BseDI CCNNGG 2 cut(s) 822, 1342
BseGI GGATG 1 cut(s) 74
BseJI GATNNNNATC 1 cut(s) 144
BseLI CCNNNNNNNGG 1 cut(s) 829
BseMII CTCAG 1 cut(s) 62
BseNI ACTGG 6 cut(s) 319, 382, 647, 692, 862, 1473
BseRI GAGGAG 2 cut(s) 1266, 1338
BseXI GCAGC 2 cut(s) 1430, 1433
BseYI CCCAGC 1 cut(s) 753
BsgI GTGCAG 2 cut(s) 320, 1432
BshFI GGCC 3 cut(s) 359, 645, 1257
BshNI GGYRCC 1 cut(s) 230
BsiHKAI GWGCWC 1 cut(s) 654
BsiSI CCGG 2 cut(s) 824, 1372
BslFI GGGAC 1 cut(s) 722
BslI CCNNNNNNNGG 1 cut(s) 829
BsmAI GTCTC 3 cut(s) 212, 257, 1288
BsmFI GGGAC 1 cut(s) 722
BsmI GAATGC 2 cut(s) 907, 1075
BsnI GGCC 3 cut(s) 359, 645, 1257
Bsp119I TTCGAA 2 cut(s) 300, 980
Bsp1286I GDGCHC 1 cut(s) 654
Bsp1407I TGTACA 1 cut(s) 922
Bsp143I GATC 6 cut(s) 134, 715, 781, 1002, 1238, 1393
BspANI GGCC 3 cut(s) 359, 645, 1257
BspCNI CTCAG 1 cut(s) 61
BspLI GGNNCC 1 cut(s) 232
BspPI GGATC 5 cut(s) 142, 710, 789, 1246, 1388
BspT104I TTCGAA 2 cut(s) 300, 980
BspT107I GGYRCC 1 cut(s) 230
BsrGI TGTACA 1 cut(s) 922
BsrI ACTGG 6 cut(s) 319, 382, 647, 692, 862, 1473
BssECI CCNNGG 2 cut(s) 822, 1342
BssMI GATC 6 cut(s) 134, 715, 781, 1002, 1238, 1393
BssNI GRCGYC 1 cut(s) 669
BssT1I CCWWGG 1 cut(s) 1342
Bst4CI ACNGT 1 cut(s) 602
Bst6I CTCTTC 1 cut(s) 1197
BstACI GRCGYC 1 cut(s) 669
BstAUI TGTACA 1 cut(s) 922
BstBAI YACGTR 1 cut(s) 768
BstBI TTCGAA 2 cut(s) 300, 980
BstC8I GCNNGC 1 cut(s) 335
BstDEI CTNAG 2 cut(s) 48, 588
BstF5I GGATG 1 cut(s) 74
BstKTI GATC 6 cut(s) 137, 718, 784, 1005, 1241, 1396
BstMAI GTCTC 3 cut(s) 212, 257, 1288
BstMBI GATC 6 cut(s) 134, 715, 781, 1002, 1238, 1393
BstSCI CCNGG 1 cut(s) 822
BstSFI CTRYAG 1 cut(s) 960
BstSNI TACGTA 1 cut(s) 768
BstV1I GCAGC 2 cut(s) 1430, 1433
BstV2I GAAGAC 1 cut(s) 553
BstX2I RGATCY 1 cut(s) 1002
BstXI CCANNNNNNTGG 1 cut(s) 1343
BstYI RGATCY 1 cut(s) 1002
BsuRI GGCC 3 cut(s) 359, 645, 1257
BtsCI GGATG 1 cut(s) 74
BtsI GCAGTG 1 cut(s) 426
BtsIMutI CAGTG 3 cut(s) 306, 426, 654
Cac8I GCNNGC 1 cut(s) 335
CaiI CAGNNNCTG 1 cut(s) 1479
Cfr13I GGNCC 2 cut(s) 151, 644
Csp6I GTAC 6 cut(s) 318, 329, 444, 769, 910, 923
CviAII CATG 2 cut(s) 879, 1282
CviQI GTAC 6 cut(s) 318, 329, 444, 769, 910, 923
DdeI CTNAG 2 cut(s) 48, 588
DpnI GATC 6 cut(s) 136, 717, 783, 1004, 1240, 1395
DpnII GATC 6 cut(s) 134, 715, 781, 1002, 1238, 1393
DraI TTTAAA 1 cut(s) 505
Eam1104I CTCTTC 1 cut(s) 1197
EarI CTCTTC 1 cut(s) 1197
Eco105I TACGTA 1 cut(s) 768
Eco130I CCWWGG 1 cut(s) 1342
Eco147I AGGCCT 1 cut(s) 1257
Eco32I GATATC 2 cut(s) 246, 1356
Eco47I GGWCC 1 cut(s) 151
Eco57I CTGAAG 2 cut(s) 50, 976
EcoRI GAATTC 2 cut(s) 470, 1015
EcoRV GATATC 2 cut(s) 246, 1356
EcoT14I CCWWGG 1 cut(s) 1342
ErhI CCWWGG 1 cut(s) 1342
FaeI CATG 2 cut(s) 882, 1285
FalI AAGNNNNNCTT 6 cut(s) 458, 490, 549, 581, 989, 1021
FaqI GGGAC 1 cut(s) 722
FatI CATG 2 cut(s) 878, 1281
Fnu4HI GCNGC 2 cut(s) 1444, 1447
FokI GGATG 1 cut(s) 61
Fsp4HI GCNGC 2 cut(s) 1444, 1447
FspBI CTAG 2 cut(s) 447, 906
GluI GCNGC 2 cut(s) 1444, 1447
GsaI CCCAGC 1 cut(s) 757
HaeIII GGCC 3 cut(s) 359, 645, 1257
HapII CCGG 2 cut(s) 824, 1372
Hin1I GRCGYC 1 cut(s) 669
Hin1II CATG 2 cut(s) 882, 1285
HincII GTYRAC 1 cut(s) 281
HindII GTYRAC 1 cut(s) 281
HinfI GANTC 7 cut(s) 191, 398, 497, 947, 1079, 1205, 1278
HpaII CCGG 2 cut(s) 824, 1372
HphI GGTGA 3 cut(s) 574, 648, 1078
Hpy166II GTNNAC 6 cut(s) 281, 408, 547, 835, 923, 925
Hpy188I TCNGA 8 cut(s) 139, 165, 397, 715, 946, 1146, 1250, 1398
Hpy188III TCNNGA 2 cut(s) 149, 1099
Hpy8I GTNNAC 6 cut(s) 281, 408, 547, 835, 923, 925
HpyAV CCTTC 5 cut(s) 74, 89, 205, 582, 1207
HpyCH4III ACNGT 1 cut(s) 602
HpyCH4IV ACGT 2 cut(s) 669, 767
HpyCH4V TGCA 6 cut(s) 337, 569, 803, 1379, 1405, 1449
HpyF3I CTNAG 2 cut(s) 48, 588
HpySE526I ACGT 2 cut(s) 669, 767
Hsp92I GRCGYC 1 cut(s) 669
Hsp92II CATG 2 cut(s) 882, 1285
Kzo9I GATC 6 cut(s) 134, 715, 781, 1002, 1238, 1393
Lsp1109I GCAGC 2 cut(s) 1430, 1433
LweI GCATC 3 cut(s) 130, 536, 812
MaeI CTAG 2 cut(s) 447, 906
MaeII ACGT 2 cut(s) 669, 767
MaeIII GTNAC 2 cut(s) 670, 932
MalI GATC 6 cut(s) 136, 717, 783, 1004, 1240, 1395
MboI GATC 6 cut(s) 134, 715, 781, 1002, 1238, 1393
MboII GAAGA 6 cut(s) 50, 345, 553, 599, 1214, 1363
MfeI CAATTG 1 cut(s) 127
MflI RGATCY 1 cut(s) 1002
MhlI GDGCHC 1 cut(s) 654
MlyI GAGTC 2 cut(s) 491, 1214
MmeI TCCRAC 4 cut(s) 143, 619, 894, 1216
MroXI GAANNNNTTC 2 cut(s) 422, 474
MseI TTAA 5 cut(s) 438, 486, 504, 759, 1092
MslI CAYNNNNRTG 2 cut(s) 930, 1454
MspI CCGG 2 cut(s) 824, 1372
MspR9I CCNGG 1 cut(s) 824
MunI CAATTG 1 cut(s) 127
Mva1269I GAATGC 2 cut(s) 907, 1075
NciI CCSGG 1 cut(s) 824
NdeII GATC 6 cut(s) 134, 715, 781, 1002, 1238, 1393
NlaIII CATG 2 cut(s) 882, 1285
NlaIV GGNNCC 1 cut(s) 232
NmuCI GTSAC 2 cut(s) 670, 932
NspV TTCGAA 2 cut(s) 300, 980
OliI CACNNNNGTG 1 cut(s) 930
PceI AGGCCT 1 cut(s) 1257
PctI GAATGC 2 cut(s) 907, 1075
PdmI GAANNNNTTC 2 cut(s) 422, 474
PfeI GAWTC 5 cut(s) 191, 398, 947, 1079, 1278
PkrI GCNGC 2 cut(s) 1445, 1448
PleI GAGTC 2 cut(s) 491, 1213
PpsI GAGTC 2 cut(s) 491, 1213
Ppu21I YACGTR 1 cut(s) 768
PshBI ATTAAT 2 cut(s) 438, 486
PsiI TTATAA 2 cut(s) 1194, 1437
PspFI CCCAGC 1 cut(s) 753
PspN4I GGNNCC 1 cut(s) 232
PspPI GGNCC 2 cut(s) 151, 644
PstNI CAGNNNCTG 1 cut(s) 1479
PsuI RGATCY 1 cut(s) 1002
RsaI GTAC 6 cut(s) 319, 330, 445, 770, 911, 924
RsaNI GTAC 6 cut(s) 318, 329, 444, 769, 910, 923
RseI CAYNNNNRTG 2 cut(s) 930, 1454
SaqAI TTAA 5 cut(s) 438, 486, 504, 759, 1092
SatI GCNGC 2 cut(s) 1444, 1447
Sau3AI GATC 6 cut(s) 134, 715, 781, 1002, 1238, 1393
Sau96I GGNCC 2 cut(s) 151, 644
ScaI AGTACT 1 cut(s) 445
SchI GAGTC 2 cut(s) 491, 1214
ScrFI CCNGG 1 cut(s) 824
SduI GDGCHC 1 cut(s) 654
SfaNI GCATC 3 cut(s) 130, 536, 812
SfcI CTRYAG 1 cut(s) 960
SfuI TTCGAA 2 cut(s) 300, 980
SinI GGWCC 1 cut(s) 151
SmiMI CAYNNNNRTG 2 cut(s) 930, 1454
SmlI CTYRAG 2 cut(s) 361, 522
SmoI CTYRAG 2 cut(s) 361, 522
SnaBI TACGTA 1 cut(s) 768
SseBI AGGCCT 1 cut(s) 1257
SspI AATATT 1 cut(s) 1161
SspMI CTAG 2 cut(s) 447, 906
StuI AGGCCT 1 cut(s) 1257
StyD4I CCNGG 1 cut(s) 822
StyI CCWWGG 1 cut(s) 1342
TaaI ACNGT 1 cut(s) 602
TaiI ACGT 2 cut(s) 672, 770
TaqI TCGA 2 cut(s) 300, 980
TatI WGTACW 2 cut(s) 443, 922
TfiI GAWTC 5 cut(s) 191, 398, 947, 1079, 1278
Tru1I TTAA 5 cut(s) 438, 486, 504, 759, 1092
Tru9I TTAA 5 cut(s) 438, 486, 504, 759, 1092
TscAI CASTG 3 cut(s) 313, 433, 654
TseFI GTSAC 2 cut(s) 670, 932
TseI GCWGC 2 cut(s) 1443, 1446
Tsp45I GTSAC 2 cut(s) 670, 932
TspDTI ATGAA 4 cut(s) 117, 160, 1258, 1270
TspGWI ACGGA 1 cut(s) 908
TspRI CASTG 3 cut(s) 313, 433, 654
VpaK11BI GGWCC 1 cut(s) 151
VspI ATTAAT 2 cut(s) 438, 486
XapI RAATTY 4 cut(s) 166, 470, 577, 1015
XmnI GAANNNNTTC 2 cut(s) 422, 474
XspI CTAG 2 cut(s) 447, 906
ZraI GACGTC 1 cut(s) 670
ZrmI AGTACT 1 cut(s) 445
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.