FvH4_1g16861

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000413
Physical Location & Seq
Reverse (-)
9762720 .. 9765203
2484 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g16861.t1

Sequence Viewer

Length: 2415 bp
ATGGAATTTTTTCAAAAGTGCAGAATCCATGTCCATATTCTGCTTCTTTTTCTCCTCCTCTTCTCAAACCTTCACTCTCTCTCTTTTGCTGATAATTACTACATCAATTGTGGCTCAGATGCTAATGTGAGCCTCACTACTGGCCAGAATTTTGTTGCAGAATCAAAGTCTGGTTCCTCTTTCTCCAAAAGCAACGCCATCGCAGACACGAACCAGTTGTCAGCTTCACTATCAGCTCTCTACCAGACAGCAAGAGCTTCCAGTGATCCTTTCTACTATGAGTTCAAGGTCACTGTTGGTACTTATCTGGTACGCCTGCATTTCTTAGCCTTTTTTTCCACCTCAAGTAATCTCTCGGCAGCTGTTTTTGATGTTCTGGATTCTACAAAATTCACACTGTTGAACAATTTCAGTGCCAAAAGTAGTACTAGTTCTCCTTTGATAAAGGAGTTCTTTCTAAGAATTGATAGTACCGAGTCATTTAGACTGTATTTTACACCCAGGGCATCATCTTTGGCTTTTGTCAATGCTATTGAATTCTTCGCCGTCCCTCCAGATTTCACCAACTTCATCCCTGAGAATTTCACCAGTAATAATAGCCCTTTACAGACAATTTACAGAGTGAATGTTGGGGGCCCTTCAAACAATGATACATTGTGGAGAAGCTGGGAAACAGATGACACTTACCTGCTCGATCCAAACTCTGCTAAGGAAACCAGCAAAGATTGGGTTTACCTGACTGCTAAAGCGATGAATATTAATGCTAGCAGGCCAGCGAATTCCTCCAACATAACCTGGTCTTTAAGAGTGAGAGCGAATGCTAGGCACATTGTCCGGGCTCATTTCTGTGACATTGTTGGTTCGGCGCCTGGTAACGTTATATTTAACTTGTATTCAAATGGCAACATCCGCAAAGAGGTTGGCAGGGCTCCTCTGTCGTCTGTTCCTTTCTACTATGACTTTGTGGTGAATTCTAGTGCGTCTGAACTCATTAACATCAGCATAAGACCTAGGAATGATTCTGCAGAACCAAATGCATTTCTAAATGGGCTAGAAATATTGGAGATAATGGAGGGAAAAGGTTCAATTCCTCATGTGGAAGTGCCCAAGAAGAATATTGTGGCTGTGGTGGTTGGCTCAGTTCTTGGGGGCCTGTCACTCATCTGCATTTTAGTAGCTGGATTTGTGTTCCGTTTGAGACAAAGAAAGGCAGAGAAGCAAGTTGAAACTTCAGACTGGTCACCAATGCCTGCAAATGGCGGGAGTTCCTACAGCAAAGTGACTGAAAGAACCATCACTGGTTCACCTATGAATCTGATGAATCTTGGGTTGAAGATATCTTTTGCCGAAATTCAGTCGGCAACTCACAACTTTGACACCAAATTTCTGATAGGTAAGGGTGGCTTCGGGAATGTATATAAAGGGACTCTCTTTAATGGCACCAAGGTAGCTGTAAAGCGTGCTTATAAGCGAGATGAGCAAGGTTCAGGATCCGGCCAAGGCCTTCCAGAATTCCAAACAGAGATTATGGTATTGTCCAAGATCCGCCACCGCCATCTTGTGTCCTTAATTGGGTACTGTGATGAAAGGTGTGAGATGATACTAGTCTATGAGTTCATGGAAAAGGGGACCTTGAGAGACCATTTGTATGAATCGAACTTCCCTCGCTTGACGTGGAAGCAAAGACTTGAAATTTGTACTGGAGCAGCAAGGGGTCTTCATTATCTCCACACAGGTGCAGCTGGGGGAATCATTCACCGTGATGTCAAGTCCACCAACATATTGCTTGATGAAAACCATGTTGCCAAAGTTGCTGACTTTGGCCTTTCGAAATCTGGCCCTCTTGATGAGACGCATGTCAGCACAAATGTCAAAGGCACTTTTGGTTACCTAGATCCTGAGTATATGATGTCTGAACAGTTGACAGAAAAATCTGATGTGTACTCATTTGGTGTAGTTCTTCTTGAGGTGTTATGTGGAAGACCTGCTATTGATCCAACACTTCCAAGAGAGCAAATGAACTTAGCTGACTGGGGAATGCTTTGCAAGAAAAAGGGGTTGCTTGAACAGATTGTTGATTCTCCATTGAAAAGTCAGATTGATCCCAGCTCACTGAGAAAGTTTGGTGAGACGGCTGAGAAGTGTTTGCAAGAAGATGCTTCTGATAGGCCAACAATGGCCGATGTGCTGTGGGATTTGGAGTATGCATTACAGCTTCAGCAAACAACGAAGCTGAAAGAGGCTTATGAGGACAGCACAACCATTGATGCTTCATCAGCTGCATTCGGTTTGCCAATTGTTCAGCGTTTTCCTTCACTTGGTTCGACCATAAATGGAGATGATATGAGGGACAACGAATTGGACACGACAGAAAATGAAATTTTCTCCCAATTGAAAATTGGTGATGCCAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

805

Amino Acids

89.28

Weight (kDa)

6.03

Isoelectric Point (pI)

36.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 33 - 126 1.3e-08 Malectin domain
Malectin_like PF12819 35 - 355 6.5e-21 Malectin-like domain
Pkinase PF00069 461 - 730 9.9e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 463 - 731 4.1e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000413)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23200
fragaria_vesca FvH4_1g16860 FvH4_1g16861
malus_domestica MD02G1018900.v1.1 MD15G1289500.v1.1 MD15G1289600.v1.1 MD15G1289700.v1.1
prunus_persica Prupe.6G227800_v2.0.a1 Prupe.6G228000_v2.0.a1 Prupe.6G228100_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228300_v2.0.a1
pyrus_communis pycom02g01680 pycom02g01690 pycom15g25310 pycom15g25330 pycom15g25340
rosa_chinensis RchiOBHm_Chr1g0324321 RchiOBHm_Chr1g0324331 RchiOBHm_Chr1g0324341 RchiOBHm_Chr1g0324401 RchiOBHm_Chr1g0324441 RchiOBHm_Chr2g0106751 RchiOBHm_Chr2g0106761 RchiOBHm_Chr2g0106771 RchiOBHm_Chr2g0106781 RchiOBHm_Chr2g0106801 RchiOBHm_Chr2g0106811 RchiOBHm_Chr2g0106821
rosa_laevigata RLG00000017539 RLG00000017540 RLG00000017541 RLG00000030200 RLG00000030201
rosa_multiflora Rmu_sc0000751.1_g000001 Rmu_sc0000751.1_g000002 Rmu_sc0000751.1_g000003 Rmu_sc0000751.1_g000005 Rmu_sc0000751.1_g000007 Rmu_sc0000751.1_g000008 Rmu_sc0000751.1_g000018 Rmu_sc0000751.1_g000019 Rmu_sc0000751.1_g000026 Rmu_sc0000751.1_g000027 Rmu_sc0000751.1_g000028 Rmu_sc0000751.1_g000029 Rmu_sc0003410.1_g000012 Rmu_sc0004000.1_g000023 Rmu_sc0004000.1_g000024 Rmu_sc0004082.1_g000015 Rmu_sc0004082.1_g000017 Rmu_sc0026507.1_g000001 Rmu_sc0031196.1_g000001 Rmu_sc0039591.1_g000001
rosa_roxburghii Rroxscaffold_159G00432710 Rroxscaffold_159G00432780 Rroxscaffold_159G00432840 Rroxscaffold_159G00433010 Rroxscaffold_2G00098070 Rroxscaffold_2G00136770 Rroxscaffold_4G00325540 Rroxscaffold_4G00325630 Rroxscaffold_4G00325680
rosa_rugosa Rorug01G0045700 Rorug02G0138500 Rorug02G0138600 Rorug02G0138700 Rorug02G0138800 Rorug02G0138900
rosa_samantha Rh1AG061400 Rh1BG052300 Rh1CG063400 Rh1CG063700 Rh1DG067800 Rh2AG189400 Rh2AG189800 Rh2AG190000 Rh2AG190100 Rh2BG201100 Rh2BG201300 Rh2CG194500 Rh2CG194600 Rh2CG194700 Rh2DG195700 Rh2DG195900 Rh2DG196300 Rh2DG196400 Rh2DG196500 Rh2DG196600
rosa_wichuraiana Rw1G004230 Rw1G005210 Rw2G014900 Rw2G014910 Rw2G014930 Rw2G014940 Rw2G014950 Rw2G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1467
Acc36I ACCTGC 2 cut(s) 696, 1993
AccB1I GGYRCC 2 cut(s) 865, 1439
AciI CCGC 4 cut(s) 910, 1260, 1546, 1552
AclI AACGTT 1 cut(s) 876
AclWI GGATC 8 cut(s) 260, 689, 1485, 1498, 1537, 1889, 1988, 2096
AcoI YGGCCR 3 cut(s) 142, 1495, 2178
AcuI CTGAAG 2 cut(s) 1215, 2201
AcyI GRCGYC 1 cut(s) 866
AfaI GTAC 7 cut(s) 301, 312, 427, 472, 1577, 1699, 1943
AfiI CCNNNNNNNGG 4 cut(s) 916, 1256, 1572, 2318
AhlI ACTAGT 2 cut(s) 428, 1603
AjiI CACGTC 1 cut(s) 1674
AjnI CCWGG 3 cut(s) 500, 794, 868
AleI CACNNNNGTG 1 cut(s) 1734
Alw26I GTCTC 4 cut(s) 1192, 1632, 1844, 2123
AlwI GGATC 8 cut(s) 260, 689, 1485, 1498, 1537, 1889, 1988, 2096
ApaI GGGCCC 1 cut(s) 638
ApeKI GCWGC 4 cut(s) 359, 1706, 1739, 2279
ArsI GACNNNNNNTTYG 4 cut(s) 203, 235, 1677, 1709
AseI ATTAAT 1 cut(s) 759
Asp700I GAANNNNTTC 3 cut(s) 9, 407, 1081
AspA2I CCTAGG 1 cut(s) 1010
AspLEI GCGC 1 cut(s) 868
AspS9I GGNCC 5 cut(s) 634, 635, 1150, 1629, 1838
AsuC2I CCSGG 1 cut(s) 836
AsuHPI GGTGA 8 cut(s) 553, 577, 979, 1233, 1296, 1748, 2138, 2414
AsuII TTCGAA 1 cut(s) 1829
AsuNHI GCTAGC 1 cut(s) 764
AvaII GGWCC 1 cut(s) 1629
AvrII CCTAGG 1 cut(s) 1010
BaeGI GKGCMC 2 cut(s) 638, 1107
BalI TGGCCA 1 cut(s) 144
BamHI GGATCC 1 cut(s) 1490
BanI GGYRCC 2 cut(s) 865, 1439
BanII GRGCYC 3 cut(s) 638, 841, 931
BbsI GAAGAC 2 cut(s) 1709, 1987
BbvI GCAGC 4 cut(s) 371, 1718, 1751, 2266
BccI CCATC 3 cut(s) 206, 1301, 1563
BceAI ACGGC 2 cut(s) 530, 2148
BcgI CGANNNNNNTGC 2 cut(s) 181, 215
BciT130I CCWGG 3 cut(s) 502, 796, 870
BcnI CCSGG 1 cut(s) 836
BcoDI GTCTC 4 cut(s) 1192, 1632, 1844, 2123
BcuI ACTAGT 2 cut(s) 428, 1603
BfaI CTAG 8 cut(s) 429, 765, 822, 975, 1011, 1052, 1604, 1892
BfmI CTRYAG 2 cut(s) 1023, 1270
BfoI RGCGCY 1 cut(s) 869
BfuAI ACCTGC 2 cut(s) 696, 1993
BisI GCNGC 4 cut(s) 360, 1707, 1740, 2280
BlnI CCTAGG 1 cut(s) 1010
BlsI GCNGC 4 cut(s) 361, 1708, 1741, 2281
BmcAI AGTACT 1 cut(s) 427
Bme1390I CCNGG 4 cut(s) 502, 796, 836, 870
Bme18I GGWCC 1 cut(s) 1629
BmgBI CACGTC 1 cut(s) 1674
BmgT120I GGNCC 5 cut(s) 634, 635, 1150, 1629, 1838
BmiI GGNNCC 9 cut(s) 175, 635, 636, 867, 930, 1151, 1441, 1492, 1630
BmrFI CCNGG 4 cut(s) 502, 796, 836, 870
BmrI ACTGGG 1 cut(s) 2041
BmsI GCATC 5 cut(s) 109, 515, 2146, 2257, 2395
BmtI GCTAGC 1 cut(s) 768
BmuI ACTGGG 1 cut(s) 2041
BoxI GACNNNNGTC 1 cut(s) 1856
BpiI GAAGAC 2 cut(s) 1709, 1987
BpmI CTGGAG 2 cut(s) 537, 1722
Bpu10I CCTNAGC 1 cut(s) 708
Bpu14I TTCGAA 1 cut(s) 1829
BpuEI CTTGAG 3 cut(s) 328, 1654, 1985
BpuMI CCSGG 1 cut(s) 836
BsaHI GRCGYC 1 cut(s) 866
BsaI GGTCTC 1 cut(s) 1632
BsaJI CCNNGG 5 cut(s) 500, 501, 1010, 1443, 1498
BsaXI ACNNNNNCTCC 2 cut(s) 418, 448
Bsc4I CCNNNNNNNGG 4 cut(s) 916, 1256, 1572, 2318
Bse1I ACTGG 8 cut(s) 145, 214, 261, 588, 1241, 1303, 1705, 2036
BseBI CCWGG 3 cut(s) 502, 796, 870
BseDI CCNNGG 5 cut(s) 500, 501, 1010, 1443, 1498
BseGI GGATG 2 cut(s) 570, 906
BseLI CCNNNNNNNGG 4 cut(s) 916, 1256, 1572, 2318
BseMII CTCAG 6 cut(s) 129, 567, 1152, 1890, 2105, 2127
BseNI ACTGG 8 cut(s) 145, 214, 261, 588, 1241, 1303, 1705, 2036
BseRI GAGGAG 3 cut(s) 44, 47, 921
BseSI GKGCMC 2 cut(s) 638, 1107
BseXI GCAGC 4 cut(s) 371, 1718, 1751, 2266
BseYI CCCAGC 3 cut(s) 666, 1742, 2105
BsgI GTGCAG 2 cut(s) 40, 1758
BshNI GGYRCC 2 cut(s) 865, 1439
BsiSI CCGG 2 cut(s) 835, 1494
BslFI GGGAC 4 cut(s) 533, 1438, 1642, 2363
BslI CCNNNNNNNGG 4 cut(s) 916, 1256, 1572, 2318
BsmAI GTCTC 4 cut(s) 1192, 1632, 1844, 2123
BsmBI CGTCTC 2 cut(s) 1844, 2123
BsmFI GGGAC 4 cut(s) 533, 1438, 1642, 2363
BsmI GAATGC 3 cut(s) 823, 2043, 2282
Bso31I GGTCTC 1 cut(s) 1632
Bsp119I TTCGAA 1 cut(s) 1829
Bsp120I GGGCCC 1 cut(s) 634
Bsp1286I GDGCHC 4 cut(s) 638, 841, 931, 1107
Bsp143I GATC 7 cut(s) 265, 694, 1490, 1542, 1894, 1993, 2101
BspACI CCGC 4 cut(s) 910, 1260, 1546, 1552
BspCNI CTCAG 6 cut(s) 128, 568, 1151, 1891, 2106, 2128
BspLI GGNNCC 9 cut(s) 175, 635, 636, 867, 930, 1151, 1441, 1492, 1630
BspMAI CTGCAG 1 cut(s) 1027
BspMI ACCTGC 2 cut(s) 696, 1993
BspOI GCTAGC 1 cut(s) 768
BspPI GGATC 8 cut(s) 260, 689, 1485, 1498, 1537, 1889, 1988, 2096
BspT104I TTCGAA 1 cut(s) 1829
BspT107I GGYRCC 2 cut(s) 865, 1439
BspTNI GGTCTC 1 cut(s) 1632
BsrI ACTGG 8 cut(s) 145, 214, 261, 588, 1241, 1303, 1705, 2036
BssECI CCNNGG 5 cut(s) 500, 501, 1010, 1443, 1498
BssMI GATC 7 cut(s) 265, 694, 1490, 1542, 1894, 1993, 2101
BssNI GRCGYC 1 cut(s) 866
BssT1I CCWWGG 3 cut(s) 1010, 1443, 1498
Bst2UI CCWGG 3 cut(s) 502, 796, 870
Bst4CI ACNGT 6 cut(s) 295, 399, 489, 1580, 1760, 1920
Bst6I CTCTTC 1 cut(s) 65
BstACI GRCGYC 1 cut(s) 866
BstBI TTCGAA 1 cut(s) 1829
BstC8I GCNNGC 6 cut(s) 317, 766, 770, 774, 1251, 1461
BstEII GGTNACC 2 cut(s) 1239, 1886
BstF5I GGATG 2 cut(s) 570, 906
BstH2I RGCGCY 1 cut(s) 869
BstHHI GCGC 1 cut(s) 868
BstKTI GATC 7 cut(s) 268, 697, 1493, 1545, 1897, 1996, 2104
BstMAI GTCTC 4 cut(s) 1192, 1632, 1844, 2123
BstMBI GATC 7 cut(s) 265, 694, 1490, 1542, 1894, 1993, 2101
BstMWI GCNNNNNNNGC 4 cut(s) 909, 1477, 1811, 2276
BstNI CCWGG 3 cut(s) 502, 796, 870
BstNSI RCATGY 1 cut(s) 1859
BstPAI GACNNNNGTC 1 cut(s) 1856
BstPI GGTNACC 2 cut(s) 1239, 1886
BstSCI CCNGG 4 cut(s) 500, 794, 834, 868
BstSFI CTRYAG 2 cut(s) 1023, 1270
BstSLI GKGCMC 2 cut(s) 638, 1107
BstV1I GCAGC 4 cut(s) 371, 1718, 1751, 2266
BstV2I GAAGAC 2 cut(s) 1709, 1987
BstX2I RGATCY 3 cut(s) 1490, 1542, 1894
BstYI RGATCY 3 cut(s) 1490, 1542, 1894
BtgZI GCGATG 2 cut(s) 184, 764
BtrI CACGTC 1 cut(s) 1674
BtsCI GGATG 2 cut(s) 570, 906
BtsIMutI CAGTG 6 cut(s) 268, 291, 395, 418, 1296, 2111
BveI ACCTGC 2 cut(s) 696, 1993
Cac8I GCNNGC 6 cut(s) 317, 766, 770, 774, 1251, 1461
CfoI GCGC 1 cut(s) 868
Cfr13I GGNCC 5 cut(s) 634, 635, 1150, 1629, 1838
CseI GACGC 2 cut(s) 969, 1861
CsiI ACCWGGT 1 cut(s) 794
Csp6I GTAC 7 cut(s) 300, 311, 426, 471, 1576, 1698, 1942
CviAII CATG 5 cut(s) 29, 1094, 1618, 1799, 1856
CviQI GTAC 7 cut(s) 300, 311, 426, 471, 1576, 1698, 1942
DinI GGCGCC 1 cut(s) 867
DpnI GATC 7 cut(s) 267, 696, 1492, 1544, 1896, 1995, 2103
DpnII GATC 7 cut(s) 265, 694, 1490, 1542, 1894, 1993, 2101
EaeI YGGCCR 3 cut(s) 142, 1495, 2178
Eam1104I CTCTTC 1 cut(s) 65
EarI CTCTTC 1 cut(s) 65
EciI GGCGGA 1 cut(s) 1535
Eco130I CCWWGG 3 cut(s) 1010, 1443, 1498
Eco147I AGGCCT 1 cut(s) 1503
Eco24I GRGCYC 3 cut(s) 638, 841, 931
Eco31I GGTCTC 1 cut(s) 1632
Eco32I GATATC 1 cut(s) 1338
Eco47I GGWCC 1 cut(s) 1629
Eco57I CTGAAG 2 cut(s) 1215, 2201
Eco91I GGTNACC 2 cut(s) 1239, 1886
EcoO109I RGGNCCY 4 cut(s) 634, 635, 1150, 1629
EcoO65I GGTNACC 2 cut(s) 1239, 1886
EcoRI GAATTC 4 cut(s) 536, 778, 970, 1511
EcoRII CCWGG 3 cut(s) 500, 794, 868
EcoRV GATATC 1 cut(s) 1338
EcoT14I CCWWGG 3 cut(s) 1010, 1443, 1498
EcoT22I ATGCAT 2 cut(s) 1039, 2209
EcoT38I GRGCYC 3 cut(s) 638, 841, 931
EgeI GGCGCC 1 cut(s) 867
EheI GGCGCC 1 cut(s) 867
ErhI CCWWGG 3 cut(s) 1010, 1443, 1498
Esp3I CGTCTC 2 cut(s) 1844, 2123
FaeI CATG 5 cut(s) 32, 1097, 1621, 1802, 1859
FalI AAGNNNNNCTT 6 cut(s) 437, 469, 1388, 1420, 1616, 1648
FaqI GGGAC 4 cut(s) 533, 1438, 1642, 2363
FatI CATG 5 cut(s) 28, 1093, 1617, 1798, 1855
FauI CCCGC 1 cut(s) 1253
Fnu4HI GCNGC 4 cut(s) 360, 1707, 1740, 2280
FokI GGATG 2 cut(s) 557, 893
FriOI GRGCYC 3 cut(s) 638, 841, 931
Fsp4HI GCNGC 4 cut(s) 360, 1707, 1740, 2280
FspBI CTAG 8 cut(s) 429, 765, 822, 975, 1011, 1052, 1604, 1892
GlaI GCGC 1 cut(s) 867
GluI GCNGC 4 cut(s) 360, 1707, 1740, 2280
GsaI CCCAGC 3 cut(s) 670, 1746, 2109
GsuI CTGGAG 2 cut(s) 537, 1722
HaeII RGCGCY 1 cut(s) 869
HapII CCGG 2 cut(s) 835, 1494
HgaI GACGC 2 cut(s) 969, 1861
HhaI GCGC 1 cut(s) 868
Hin1I GRCGYC 1 cut(s) 866
Hin1II CATG 5 cut(s) 32, 1097, 1621, 1802, 1859
Hin6I GCGC 1 cut(s) 866
HinP1I GCGC 1 cut(s) 866
HincII GTYRAC 1 cut(s) 1923
HindII GTYRAC 1 cut(s) 1923
HpaII CCGG 2 cut(s) 835, 1494
HphI GGTGA 8 cut(s) 553, 577, 979, 1233, 1296, 1748, 2138, 2414
Hpy166II GTNNAC 5 cut(s) 733, 1304, 1773, 1923, 1942
Hpy188I TCNGA 9 cut(s) 118, 985, 1234, 1317, 1389, 1915, 1936, 2097, 2164
Hpy188III TCNNGA 8 cut(s) 377, 554, 1408, 1488, 1508, 1844, 1898, 1964
Hpy8I GTNNAC 5 cut(s) 733, 1304, 1773, 1923, 1942
HpyAV CCTTC 4 cut(s) 80, 648, 1514, 2322
HpyCH4III ACNGT 6 cut(s) 295, 399, 489, 1580, 1760, 1920
HpyCH4IV ACGT 2 cut(s) 876, 1673
HpyF10VI GCNNNNNNNGC 4 cut(s) 909, 1477, 1811, 2276
HpySE526I ACGT 2 cut(s) 876, 1673
Hsp92I GRCGYC 1 cut(s) 866
Hsp92II CATG 5 cut(s) 32, 1097, 1621, 1802, 1859
HspAI GCGC 1 cut(s) 866
KasI GGCGCC 1 cut(s) 865
Kzo9I GATC 7 cut(s) 265, 694, 1490, 1542, 1894, 1993, 2101
LmnI GCTCC 2 cut(s) 934, 1703
Lsp1109I GCAGC 4 cut(s) 371, 1718, 1751, 2266
LweI GCATC 5 cut(s) 109, 515, 2146, 2257, 2395
MabI ACCWGGT 1 cut(s) 794
MaeI CTAG 8 cut(s) 429, 765, 822, 975, 1011, 1052, 1604, 1892
MaeII ACGT 2 cut(s) 876, 1673
MaeIII GTNAC 7 cut(s) 289, 848, 872, 1155, 1239, 1279, 1886
MalI GATC 7 cut(s) 267, 696, 1492, 1544, 1896, 1995, 2103
MboI GATC 7 cut(s) 265, 694, 1490, 1542, 1894, 1993, 2101
MboII GAAGA 8 cut(s) 52, 532, 1123, 1345, 1709, 1952, 1992, 2165
MfeI CAATTG 3 cut(s) 106, 2295, 2390
MflI RGATCY 3 cut(s) 1490, 1542, 1894
MhlI GDGCHC 4 cut(s) 638, 841, 931, 1107
MlsI TGGCCA 1 cut(s) 144
MluNI TGGCCA 1 cut(s) 144
Mly113I GGCGCC 1 cut(s) 866
MlyI GAGTC 2 cut(s) 485, 1420
MmeI TCCRAC 2 cut(s) 810, 2021
Mox20I TGGCCA 1 cut(s) 144
Mph1103I ATGCAT 2 cut(s) 1039, 2209
MroXI GAANNNNTTC 3 cut(s) 9, 407, 1081
MscI TGGCCA 1 cut(s) 144
MseI TTAA 6 cut(s) 759, 803, 885, 993, 1434, 1568
MslI CAYNNNNRTG 4 cut(s) 846, 1647, 1734, 1761
Msp20I TGGCCA 1 cut(s) 144
MspA1I CMGCKG 3 cut(s) 362, 1742, 2279
MspI CCGG 2 cut(s) 835, 1494
MspR9I CCNGG 4 cut(s) 502, 796, 836, 870
MunI CAATTG 3 cut(s) 106, 2295, 2390
Mva1269I GAATGC 3 cut(s) 823, 2043, 2282
MvaI CCWGG 3 cut(s) 502, 796, 870
MwoI GCNNNNNNNGC 4 cut(s) 909, 1477, 1811, 2276
NarI GGCGCC 1 cut(s) 866
NciI CCSGG 1 cut(s) 836
NdeII GATC 7 cut(s) 265, 694, 1490, 1542, 1894, 1993, 2101
NheI GCTAGC 1 cut(s) 764
NlaIII CATG 5 cut(s) 32, 1097, 1621, 1802, 1859
NlaIV GGNNCC 9 cut(s) 175, 635, 636, 867, 930, 1151, 1441, 1492, 1630
NmeAIII GCCGAG 1 cut(s) 335
NmuCI GTSAC 5 cut(s) 289, 848, 1155, 1239, 1279
NsiI ATGCAT 2 cut(s) 1039, 2209
NspI RCATGY 1 cut(s) 1859
NspV TTCGAA 1 cut(s) 1829
OliI CACNNNNGTG 1 cut(s) 1734
PasI CCCWGGG 1 cut(s) 501
PceI AGGCCT 1 cut(s) 1503
PctI GAATGC 3 cut(s) 823, 2043, 2282
PdmI GAANNNNTTC 3 cut(s) 9, 407, 1081
PfeI GAWTC 9 cut(s) 24, 161, 380, 1019, 1312, 1321, 1652, 1749, 2078
PkrI GCNGC 4 cut(s) 361, 1708, 1741, 2281
PleI GAGTC 2 cut(s) 484, 1420
PluTI GGCGCC 1 cut(s) 869
PpsI GAGTC 2 cut(s) 484, 1420
PpuMI RGGWCCY 1 cut(s) 1629
PshAI GACNNNNGTC 1 cut(s) 1856
PshBI ATTAAT 1 cut(s) 759
PsiI TTATAA 1 cut(s) 1467
Psp1406I AACGTT 1 cut(s) 876
Psp5II RGGWCCY 1 cut(s) 1629
Psp6I CCWGG 3 cut(s) 500, 794, 868
PspEI GGTNACC 2 cut(s) 1239, 1886
PspFI CCCAGC 3 cut(s) 666, 1742, 2105
PspGI CCWGG 3 cut(s) 500, 794, 868
PspN4I GGNNCC 9 cut(s) 175, 635, 636, 867, 930, 1151, 1441, 1492, 1630
PspOMI GGGCCC 1 cut(s) 634
PspPI GGNCC 5 cut(s) 634, 635, 1150, 1629, 1838
PspPPI RGGWCCY 1 cut(s) 1629
PsrI GAACNNNNNNTAC 2 cut(s) 415, 447
PstI CTGCAG 1 cut(s) 1027
PsuI RGATCY 3 cut(s) 1490, 1542, 1894
PvuII CAGCTG 3 cut(s) 362, 1742, 2279
RsaI GTAC 7 cut(s) 301, 312, 427, 472, 1577, 1699, 1943
RsaNI GTAC 7 cut(s) 300, 311, 426, 471, 1576, 1698, 1942
RseI CAYNNNNRTG 4 cut(s) 846, 1647, 1734, 1761
SaqAI TTAA 6 cut(s) 759, 803, 885, 993, 1434, 1568
SatI GCNGC 4 cut(s) 360, 1707, 1740, 2280
Sau3AI GATC 7 cut(s) 265, 694, 1490, 1542, 1894, 1993, 2101
Sau96I GGNCC 5 cut(s) 634, 635, 1150, 1629, 1838
ScaI AGTACT 1 cut(s) 427
SchI GAGTC 2 cut(s) 485, 1420
ScrFI CCNGG 4 cut(s) 502, 796, 836, 870
SduI GDGCHC 4 cut(s) 638, 841, 931, 1107
SexAI ACCWGGT 1 cut(s) 794
SfaNI GCATC 5 cut(s) 109, 515, 2146, 2257, 2395
SfcI CTRYAG 2 cut(s) 1023, 1270
SfoI GGCGCC 1 cut(s) 867
SfuI TTCGAA 1 cut(s) 1829
SinI GGWCC 1 cut(s) 1629
SmiMI CAYNNNNRTG 4 cut(s) 846, 1647, 1734, 1761
SmlI CTYRAG 3 cut(s) 343, 1633, 1964
SmoI CTYRAG 3 cut(s) 343, 1633, 1964
SpeI ACTAGT 2 cut(s) 428, 1603
SseBI AGGCCT 1 cut(s) 1503
SsiI CCGC 4 cut(s) 910, 1260, 1546, 1552
SspDI GGCGCC 1 cut(s) 865
SspI AATATT 3 cut(s) 757, 1059, 1117
SspMI CTAG 8 cut(s) 429, 765, 822, 975, 1011, 1052, 1604, 1892
StuI AGGCCT 1 cut(s) 1503
StyD4I CCNGG 4 cut(s) 500, 794, 834, 868
StyI CCWWGG 3 cut(s) 1010, 1443, 1498
TaaI ACNGT 6 cut(s) 295, 399, 489, 1580, 1760, 1920
TaiI ACGT 2 cut(s) 879, 1676
TaqI TCGA 4 cut(s) 693, 1655, 1829, 2324
TatI WGTACW 3 cut(s) 425, 1697, 1941
TfiI GAWTC 9 cut(s) 24, 161, 380, 1019, 1312, 1321, 1652, 1749, 2078
Tru1I TTAA 6 cut(s) 759, 803, 885, 993, 1434, 1568
Tru9I TTAA 6 cut(s) 759, 803, 885, 993, 1434, 1568
TscAI CASTG 6 cut(s) 268, 298, 402, 418, 1303, 2118
TseFI GTSAC 5 cut(s) 289, 848, 1155, 1239, 1279
TseI GCWGC 4 cut(s) 359, 1706, 1739, 2279
Tsp45I GTSAC 5 cut(s) 289, 848, 1155, 1239, 1279
TspGWI ACGGA 1 cut(s) 1181
TspRI CASTG 6 cut(s) 268, 298, 402, 418, 1303, 2118
VpaK11BI GGWCC 1 cut(s) 1629
VspI ATTAAT 1 cut(s) 759
XceI RCATGY 1 cut(s) 1859
XcmI CCANNNNNNNNNTGG 1 cut(s) 2396
XmaJI CCTAGG 1 cut(s) 1010
XmnI GAANNNNTTC 3 cut(s) 9, 407, 1081
XspI CTAG 8 cut(s) 429, 765, 822, 975, 1011, 1052, 1604, 1892
ZrmI AGTACT 1 cut(s) 427
Zsp2I ATGCAT 2 cut(s) 1039, 2209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.