Rh1DG067800

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Forward (+)
11932899 .. 11940209
7311 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG067800.1

Sequence Viewer

Length: 2433 bp
ATGGAGCATCTTCGTATCCCATTACTCTCTCTGCTTGTTTTTCTCCTCAACCTCTCATCCCTTCACTTTCTCTCTTTAGCTGATGATTATTTCATCAACTGTGGCTCACATGATAATGTGAGCCTCACTCCTGGCCAGAATTTCTCTGGGGAATCGAAGCCTGCAGGTTACTCTTCCTCCAAAAGCAAGGCTGTCAAAGACATCAACCAGTTGCCAGATATATCAACTCTATATAAGACAGCAAGAAGTTTCAGTAAACCATTCTACTACCAGTTCAACATCACTGAAGATGGTACTTATCTGGTACGCTTACATTTCTCAGCTTTCTCCTCCTCCTCCTCAAATAATCTCTCCACGGCTGTTTTTGGTGTTTTGGATTCTAAGAATTTCACACTGTTGAACAATTTCACCGCCAAGAACACTACCTACTTCCCTGTGATAAAGGAATTCTTTCTCCGAATTGATATCACCGACTCATTTAGACTATATTTTACTCCTCAACCATCATCTTTTGCATTTGTAAATGCCATAGAATTATTCCTTTCCCCTGTAGATTTCATCCCTGAGAACTATACCAGTAATCTCCCTTTACATACAATTTACAGACTCAACGTTGGAGGCTCACCAGTAAATGACACAATAGGGAGAAACTGGGAAACAGATGATAGTCATATTTCTGATCAAAACTCTGCAAAGAAAGCCACTCCTCAAAGTACACTCAATTTAGATCGCTACGGAAAAATTGATGGTTTGGTTGTATCTAATGAGTCTGTAGCCCCACTTCCAGTTTACCAGACTGCTAGAGAGATGATGAATGGCACTAGTAACATAACATGGTTTTTTAGTGTGAGTAGTAAAGCTAGACACATTGTCCGGGCTCACTTCTGTGACATTGTTGATCAGCCTGGTAACAATATTATATTTAACTTGTATGCAAATGGCAACTTCCGCAAGGAGATCGGCAACATTTCTCAATATTCGGCTATTCCCTTCTACTATGACTTTGTGGTGAATTATAGTGAATCTGAACTCTTTACTATCAGCATAAGACCTAACAATGGTGCTTCTGAACAAAATGCATTTCTAAATGGTCTGGAAATATTGGAGATAGTGGAGGGATTAGCTCCAATTCCCCATGTGAAAGAGTCCAAGAAGAATGTTGTGGCTCCTGTGGTTGGTTCAGTTCTTGGAGGCCTGTCGCTCATCTGCGTTTTAATAGTTGGATTTTTGTTCGGTTTCAGACACAGAAAGGCAGAAAAGCATGTGGAGACTTCAGTTTGGTCACCAATGCCTGCAAATGGAGGAGGGAGTTCTCACAGCTCCGCTCTCAATCTAGATTATCTTGGGTTGAAGATATCTTTCAATGAAATTCAGTCTGCAACGAACAACTTTGACACAAAGTTGGTGATAGGTAAGGGTGGCTTTGGGAATGTTTATAGAGGCACTCTTTTGAATGGCACAAAAGTGGCTGTGAAGCGAGCTTATAAGCGAGGTGAGCATGGGTCAGGATCAGGCCAAGGCCTCCTAGAATTCGAAACAGAAATCATAGTGTTATCGAAAATCCGCCACCGCCATCTTGTCTCCTTAATTGGTTATTGTAATGAAAGGTCTGAAATGATACTAGTGTATGAGTTCATGGAAAAAGGGACGTTGAGAGATCATTTGTATGATTCAGACGTGCCTCGCTTGTCGTGGAATCAAAGACTTGAAATTTGTACTGGAGCAGCAAGGGGTCTTCATTATCTCCACACAGGTGCAGCTAGGGGAATCATTCACCGAGATGTCAAGTCCACCAACATATTGCTTGATGAAAACCATGTTGCCAAAGTTGCTGACTTTGGCCTTTCGAGATCTGGAGCTCTCGATGAAACGCATGTCAGCACTAATGTTAAAGGCACTTTTGGTTACCTTGATCCTGAGTACATGATGTCTGAACAATTGACAGAAAAATGTGATGTTTACTCATTTGGTGTAGTTCTTCTTGAGGTGTTATGTGGAAGACCTGCTATTGATCCAACGCTTCCAAGAGAGCAAATGAACTTGGCTGAATGGGGAATGCTTTGCAAGAAAAAAGGGTTGCTTGAACAGATTGTTGATTCTTCATTGAAAAATCAGATTGATCCTAGCTCACTAAGAACTTTTGGTGAGACGGCTGAGAAGTGTTTGCAAGATGATGCTTCTGATAGGCCAACAATGGCCGATGTGCTGTGGGATTTGGAATATGCATTACAGCTTCAGAAAACAACAAAGCTTAAAGAGGCTCATGAGGACAGCACCACCATTGATGCTTCATCAGCAGCATTCAGTTTGCCAATTGTTCAGCGTTTTCCTTCACTTGGTTCTACAACAAATGGAGATGATATGAGGGACAGCGACTTGGACACAACAGAAAACAAAATTTTCTCCCAATTGAAAATTGGTGATGCCAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

810

Amino Acids

90.01

Weight (kDa)

5.9

Isoelectric Point (pI)

35.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 30 - 113 1.2e-07 Malectin domain
Malectin_like PF12819 32 - 369 4.2e-24 Malectin-like domain
Pkinase PF00069 467 - 736 1.3e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 468 - 737 8e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000413)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23200
fragaria_vesca FvH4_1g16860 FvH4_1g16861
malus_domestica MD02G1018900.v1.1 MD15G1289500.v1.1 MD15G1289600.v1.1 MD15G1289700.v1.1
prunus_persica Prupe.6G227800_v2.0.a1 Prupe.6G228000_v2.0.a1 Prupe.6G228100_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228300_v2.0.a1
pyrus_communis pycom02g01680 pycom02g01690 pycom15g25310 pycom15g25330 pycom15g25340
rosa_chinensis RchiOBHm_Chr1g0324321 RchiOBHm_Chr1g0324331 RchiOBHm_Chr1g0324341 RchiOBHm_Chr1g0324401 RchiOBHm_Chr1g0324441 RchiOBHm_Chr2g0106751 RchiOBHm_Chr2g0106761 RchiOBHm_Chr2g0106771 RchiOBHm_Chr2g0106781 RchiOBHm_Chr2g0106801 RchiOBHm_Chr2g0106811 RchiOBHm_Chr2g0106821
rosa_laevigata RLG00000017539 RLG00000017540 RLG00000017541 RLG00000030200 RLG00000030201
rosa_multiflora Rmu_sc0000751.1_g000001 Rmu_sc0000751.1_g000002 Rmu_sc0000751.1_g000003 Rmu_sc0000751.1_g000005 Rmu_sc0000751.1_g000007 Rmu_sc0000751.1_g000008 Rmu_sc0000751.1_g000018 Rmu_sc0000751.1_g000019 Rmu_sc0000751.1_g000026 Rmu_sc0000751.1_g000027 Rmu_sc0000751.1_g000028 Rmu_sc0000751.1_g000029 Rmu_sc0003410.1_g000012 Rmu_sc0004000.1_g000023 Rmu_sc0004000.1_g000024 Rmu_sc0004082.1_g000015 Rmu_sc0004082.1_g000017 Rmu_sc0026507.1_g000001 Rmu_sc0031196.1_g000001 Rmu_sc0039591.1_g000001
rosa_roxburghii Rroxscaffold_159G00432710 Rroxscaffold_159G00432780 Rroxscaffold_159G00432840 Rroxscaffold_159G00433010 Rroxscaffold_2G00098070 Rroxscaffold_2G00136770 Rroxscaffold_4G00325540 Rroxscaffold_4G00325630 Rroxscaffold_4G00325680
rosa_rugosa Rorug01G0045700 Rorug02G0138500 Rorug02G0138600 Rorug02G0138700 Rorug02G0138800 Rorug02G0138900
rosa_samantha Rh1AG061400 Rh1BG052300 Rh1CG063400 Rh1CG063700 Rh1DG067800 Rh2AG189400 Rh2AG189800 Rh2AG190000 Rh2AG190100 Rh2BG201100 Rh2BG201300 Rh2CG194500 Rh2CG194600 Rh2CG194700 Rh2DG195700 Rh2DG195900 Rh2DG196300 Rh2DG196400 Rh2DG196500 Rh2DG196600
rosa_wichuraiana Rw1G004230 Rw1G005210 Rw2G014900 Rw2G014910 Rw2G014930 Rw2G014940 Rw2G014950 Rw2G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1485
Acc36I ACCTGC 2 cut(s) 155, 2011
AccBSI CCGCTC 1 cut(s) 1325
AciI CCGC 5 cut(s) 411, 949, 1323, 1564, 1570
AclI AACGTT 1 cut(s) 612
AclWI GGATC 4 cut(s) 1516, 1907, 2006, 2114
AcoI YGGCCR 2 cut(s) 133, 2196
AcsI RAATTY 7 cut(s) 139, 385, 446, 1368, 1529, 1710, 2397
AcuI CTGAAG 3 cut(s) 306, 1257, 2219
AfaI GTAC 5 cut(s) 295, 306, 715, 1717, 1922
AfiI CCNNNNNNNGG 4 cut(s) 1058, 1175, 1298, 2336
AgsI TTSAA 9 cut(s) 277, 400, 1351, 1363, 1453, 1709, 2084, 2107, 2413
AhdI GACNNNNNGTC 1 cut(s) 869
AhlI ACTAGT 2 cut(s) 821, 1621
AjiI CACGTC 1 cut(s) 1678
AjnI CCWGG 2 cut(s) 130, 904
AleI CACNNNNGTG 3 cut(s) 885, 1463, 1752
Alw21I GWGCWC 1 cut(s) 1861
Alw26I GTCTC 3 cut(s) 1262, 1585, 2141
AlwI GGATC 4 cut(s) 1516, 1907, 2006, 2114
AoxI GGCC 7 cut(s) 133, 1192, 1513, 1519, 1840, 2186, 2196
ApeKI GCWGC 3 cut(s) 1724, 1757, 2297
ApoI RAATTY 7 cut(s) 139, 385, 446, 1368, 1529, 1710, 2397
ArsI GACNNNNNNTTYG 2 cut(s) 1695, 1727
Asp700I GAANNNNTTC 2 cut(s) 404, 450
AsuC2I CCSGG 1 cut(s) 875
AsuII TTCGAA 1 cut(s) 1533
BaeI ACNNNNGTAYC 2 cut(s) 1610, 1643
BalI TGGCCA 1 cut(s) 135
BanII GRGCYC 2 cut(s) 880, 1861
BarI GAAGNNNNNNTAC 2 cut(s) 765, 797
BbsI GAAGAC 2 cut(s) 1727, 2005
Bbv12I GWGCWC 1 cut(s) 1861
BbvI GCAGC 3 cut(s) 1736, 1769, 2309
BccI CCATC 4 cut(s) 284, 511, 740, 1581
BceAI ACGGC 2 cut(s) 372, 2166
BcgI CGANNNNNNTGC 2 cut(s) 940, 974
BciT130I CCWGG 2 cut(s) 132, 906
BciVI GTATCC 1 cut(s) 26
BclI TGATCA 2 cut(s) 679, 898
BcnI CCSGG 1 cut(s) 875
BcoDI GTCTC 3 cut(s) 1262, 1585, 2141
BcuI ACTAGT 2 cut(s) 821, 1621
BfaI CTAG 8 cut(s) 801, 822, 861, 1334, 1526, 1622, 1761, 2124
BfmI CTRYAG 3 cut(s) 162, 549, 771
BfuAI ACCTGC 2 cut(s) 155, 2011
BfuI GTATCC 1 cut(s) 26
BglII AGATCT 1 cut(s) 1850
BisI GCNGC 3 cut(s) 1725, 1758, 2298
BlsI GCNGC 3 cut(s) 1726, 1759, 2299
Bme1390I CCNGG 3 cut(s) 132, 875, 906
BmeRI GACNNNNNGTC 1 cut(s) 869
BmgBI CACGTC 1 cut(s) 1678
BmiI GGNNCC 1 cut(s) 1167
BmrFI CCNGG 3 cut(s) 132, 875, 906
BmrI ACTGGG 1 cut(s) 661
BmsI GCATC 4 cut(s) 16, 2164, 2275, 2413
BmuI ACTGGG 1 cut(s) 661
BpiI GAAGAC 2 cut(s) 1727, 2005
BplI GAGNNNNNCTC 2 cut(s) 112, 144
BpmI CTGGAG 2 cut(s) 1740, 1875
Bpu14I TTCGAA 1 cut(s) 1533
BpuEI CTTGAG 1 cut(s) 2003
BpuMI CCSGG 1 cut(s) 875
BsaJI CCNNGG 2 cut(s) 354, 1516
BsaXI ACNNNNNCTCC 2 cut(s) 161, 191
Bsc4I CCNNNNNNNGG 4 cut(s) 1058, 1175, 1298, 2336
Bse1I ACTGG 7 cut(s) 208, 271, 576, 626, 656, 785, 1723
BseBI CCWGG 2 cut(s) 132, 906
BseDI CCNNGG 2 cut(s) 354, 1516
BseGI GGATG 2 cut(s) 56, 558
BseLI CCNNNNNNNGG 4 cut(s) 1058, 1175, 1298, 2336
BseMII CTCAG 4 cut(s) 333, 555, 1908, 2145
BseNI ACTGG 7 cut(s) 208, 271, 576, 626, 656, 785, 1723
BseRI GAGGAG 8 cut(s) 35, 319, 322, 325, 328, 486, 696, 1317
BseXI GCAGC 3 cut(s) 1736, 1769, 2309
BsgI GTGCAG 1 cut(s) 1776
BshFI GGCC 7 cut(s) 135, 1194, 1515, 1521, 1842, 2188, 2198
BsiHKAI GWGCWC 1 cut(s) 1861
BsiSI CCGG 1 cut(s) 874
BslFI GGGAC 2 cut(s) 1660, 2381
BslI CCNNNNNNNGG 4 cut(s) 1058, 1175, 1298, 2336
BsmAI GTCTC 3 cut(s) 1262, 1585, 2141
BsmBI CGTCTC 1 cut(s) 2141
BsmFI GGGAC 2 cut(s) 1660, 2381
BsmI GAATGC 2 cut(s) 2061, 2300
BsnI GGCC 7 cut(s) 135, 1194, 1515, 1521, 1842, 2188, 2198
Bsp119I TTCGAA 1 cut(s) 1533
Bsp1286I GDGCHC 2 cut(s) 880, 1861
BspACI CCGC 5 cut(s) 411, 949, 1323, 1564, 1570
BspANI GGCC 7 cut(s) 135, 1194, 1515, 1521, 1842, 2188, 2198
BspCNI CTCAG 4 cut(s) 332, 556, 1909, 2146
BspHI TCATGA 1 cut(s) 2263
BspLI GGNNCC 1 cut(s) 1167
BspMAI CTGCAG 1 cut(s) 166
BspMI ACCTGC 2 cut(s) 155, 2011
BspPI GGATC 4 cut(s) 1516, 1907, 2006, 2114
BspT104I TTCGAA 1 cut(s) 1533
BsrBI CCGCTC 1 cut(s) 1325
BsrI ACTGG 7 cut(s) 208, 271, 576, 626, 656, 785, 1723
BssECI CCNNGG 2 cut(s) 354, 1516
BssT1I CCWWGG 1 cut(s) 1516
Bst2UI CCWGG 2 cut(s) 132, 906
Bst4CI ACNGT 2 cut(s) 101, 396
Bst6I CTCTTC 1 cut(s) 178
BstBI TTCGAA 1 cut(s) 1533
BstC8I GCNNGC 3 cut(s) 162, 1293, 1479
BstDEI CTNAG 6 cut(s) 319, 381, 564, 1917, 2132, 2154
BstDSI CCRYGG 1 cut(s) 354
BstEII GGTNACC 2 cut(s) 1281, 1904
BstF5I GGATG 2 cut(s) 56, 558
BstMAI GTCTC 3 cut(s) 1262, 1585, 2141
BstMWI GCNNNNNNNGC 5 cut(s) 698, 948, 1495, 1829, 2294
BstNI CCWGG 2 cut(s) 132, 906
BstNSI RCATGY 2 cut(s) 1265, 1877
BstPI GGTNACC 2 cut(s) 1281, 1904
BstSCI CCNGG 3 cut(s) 130, 873, 904
BstSFI CTRYAG 3 cut(s) 162, 549, 771
BstV1I GCAGC 3 cut(s) 1736, 1769, 2309
BstV2I GAAGAC 2 cut(s) 1727, 2005
BstX2I RGATCY 1 cut(s) 1850
BstYI RGATCY 1 cut(s) 1850
BsuI GTATCC 1 cut(s) 26
BsuRI GGCC 7 cut(s) 135, 1194, 1515, 1521, 1842, 2188, 2198
BtgI CCRYGG 1 cut(s) 354
BtrI CACGTC 1 cut(s) 1678
BtsCI GGATG 2 cut(s) 56, 558
BtsIMutI CAGTG 2 cut(s) 282, 392
BveI ACCTGC 2 cut(s) 155, 2011
Cac8I GCNNGC 3 cut(s) 162, 1293, 1479
CciI TCATGA 1 cut(s) 2263
Csp6I GTAC 5 cut(s) 294, 305, 714, 1716, 1921
CviQI GTAC 5 cut(s) 294, 305, 714, 1716, 1921
DdeI CTNAG 6 cut(s) 319, 381, 564, 1917, 2132, 2154
DriI GACNNNNNGTC 1 cut(s) 869
EaeI YGGCCR 2 cut(s) 133, 2196
Eam1104I CTCTTC 1 cut(s) 178
Eam1105I GACNNNNNGTC 1 cut(s) 869
EarI CTCTTC 1 cut(s) 178
EciI GGCGGA 1 cut(s) 1553
Ecl136II GAGCTC 1 cut(s) 1859
Eco130I CCWWGG 1 cut(s) 1516
Eco147I AGGCCT 2 cut(s) 1194, 1521
Eco24I GRGCYC 2 cut(s) 880, 1861
Eco32I GATATC 2 cut(s) 466, 1356
Eco53kI GAGCTC 1 cut(s) 1859
Eco57I CTGAAG 3 cut(s) 306, 1257, 2219
Eco91I GGTNACC 2 cut(s) 1281, 1904
EcoICRI GAGCTC 1 cut(s) 1859
EcoO65I GGTNACC 2 cut(s) 1281, 1904
EcoRI GAATTC 2 cut(s) 446, 1529
EcoRII CCWGG 2 cut(s) 130, 904
EcoRV GATATC 2 cut(s) 466, 1356
EcoT14I CCWWGG 1 cut(s) 1516
EcoT22I ATGCAT 2 cut(s) 1081, 2227
EcoT38I GRGCYC 2 cut(s) 880, 1861
ErhI CCWWGG 1 cut(s) 1516
Esp3I CGTCTC 1 cut(s) 2141
FalI AAGNNNNNCTT 6 cut(s) 434, 466, 1406, 1438, 2064, 2096
FaqI GGGAC 2 cut(s) 1660, 2381
FbaI TGATCA 2 cut(s) 679, 898
Fnu4HI GCNGC 3 cut(s) 1725, 1758, 2298
FokI GGATG 2 cut(s) 43, 545
FriOI GRGCYC 2 cut(s) 880, 1861
Fsp4HI GCNGC 3 cut(s) 1725, 1758, 2298
FspBI CTAG 8 cut(s) 801, 822, 861, 1334, 1526, 1622, 1761, 2124
GluI GCNGC 3 cut(s) 1725, 1758, 2298
GsuI CTGGAG 2 cut(s) 1740, 1875
HaeIII GGCC 7 cut(s) 135, 1194, 1515, 1521, 1842, 2188, 2198
HapII CCGG 1 cut(s) 874
HindIII AAGCTT 1 cut(s) 2249
HpaII CCGG 1 cut(s) 874
Hpy166II GTNNAC 5 cut(s) 257, 716, 790, 1791, 1960
Hpy188III TCNNGA 9 cut(s) 1094, 1334, 1506, 1848, 1854, 1862, 1916, 1982, 2264
Hpy8I GTNNAC 5 cut(s) 257, 716, 790, 1791, 1960
HpyAV CCTTC 3 cut(s) 71, 1000, 2340
HpyCH4III ACNGT 2 cut(s) 101, 396
HpyCH4IV ACGT 3 cut(s) 612, 1649, 1677
HpyF10VI GCNNNNNNNGC 5 cut(s) 698, 948, 1495, 1829, 2294
HpyF3I CTNAG 6 cut(s) 319, 381, 564, 1917, 2132, 2154
HpySE526I ACGT 3 cut(s) 612, 1649, 1677
Ksp22I TGATCA 2 cut(s) 679, 898
LmnI GCTCC 6 cut(s) 4, 1129, 1171, 1325, 1721, 1856
Lsp1109I GCAGC 3 cut(s) 1736, 1769, 2309
LweI GCATC 4 cut(s) 16, 2164, 2275, 2413
MaeI CTAG 8 cut(s) 801, 822, 861, 1334, 1526, 1622, 1761, 2124
MaeII ACGT 3 cut(s) 612, 1649, 1677
MaeIII GTNAC 6 cut(s) 167, 824, 887, 908, 1281, 1904
MbiI CCGCTC 1 cut(s) 1325
MboII GAAGA 8 cut(s) 165, 299, 1165, 1363, 1727, 1970, 2010, 2091
MfeI CAATTG 3 cut(s) 1937, 2313, 2408
MflI RGATCY 1 cut(s) 1850
MhlI GDGCHC 2 cut(s) 880, 1861
MlsI TGGCCA 1 cut(s) 135
MluNI TGGCCA 1 cut(s) 135
MlyI GAGTC 4 cut(s) 467, 600, 776, 1154
MmeI TCCRAC 3 cut(s) 595, 1201, 2039
Mox20I TGGCCA 1 cut(s) 135
Mph1103I ATGCAT 2 cut(s) 1081, 2227
MroXI GAANNNNTTC 2 cut(s) 404, 450
MscI TGGCCA 1 cut(s) 135
MseI TTAA 5 cut(s) 924, 1214, 1586, 1890, 2253
MslI CAYNNNNRTG 6 cut(s) 114, 885, 1463, 1665, 1752, 1779
Msp20I TGGCCA 1 cut(s) 135
MspI CCGG 1 cut(s) 874
MspR9I CCNGG 3 cut(s) 132, 875, 906
MunI CAATTG 3 cut(s) 1937, 2313, 2408
Mva1269I GAATGC 2 cut(s) 2061, 2300
MvaI CCWGG 2 cut(s) 132, 906
MwoI GCNNNNNNNGC 5 cut(s) 698, 948, 1495, 1829, 2294
NciI CCSGG 1 cut(s) 875
NlaIV GGNNCC 1 cut(s) 1167
NmuCI GTSAC 2 cut(s) 887, 1281
NsiI ATGCAT 2 cut(s) 1081, 2227
NspI RCATGY 2 cut(s) 1265, 1877
NspV TTCGAA 1 cut(s) 1533
OliI CACNNNNGTG 3 cut(s) 885, 1463, 1752
PagI TCATGA 1 cut(s) 2263
PceI AGGCCT 2 cut(s) 1194, 1521
PctI GAATGC 2 cut(s) 2061, 2300
PdmI GAANNNNTTC 2 cut(s) 404, 450
PfeI GAWTC 7 cut(s) 152, 377, 1022, 1670, 1696, 1767, 2096
PkrI GCNGC 3 cut(s) 1726, 1759, 2299
PleI GAGTC 4 cut(s) 467, 600, 775, 1153
PpsI GAGTC 4 cut(s) 467, 600, 775, 1153
PsiI TTATAA 1 cut(s) 1485
Psp124BI GAGCTC 1 cut(s) 1861
Psp1406I AACGTT 1 cut(s) 612
Psp6I CCWGG 2 cut(s) 130, 904
PspEI GGTNACC 2 cut(s) 1281, 1904
PspGI CCWGG 2 cut(s) 130, 904
PspN4I GGNNCC 1 cut(s) 1167
PsrI GAACNNNNNNTAC 2 cut(s) 410, 442
PstI CTGCAG 1 cut(s) 166
PsuI RGATCY 1 cut(s) 1850
RsaI GTAC 5 cut(s) 295, 306, 715, 1717, 1922
RsaNI GTAC 5 cut(s) 294, 305, 714, 1716, 1921
RseI CAYNNNNRTG 6 cut(s) 114, 885, 1463, 1665, 1752, 1779
SacI GAGCTC 1 cut(s) 1861
SaqAI TTAA 5 cut(s) 924, 1214, 1586, 1890, 2253
SatI GCNGC 3 cut(s) 1725, 1758, 2298
SbfI CCTGCAGG 1 cut(s) 166
SchI GAGTC 4 cut(s) 467, 600, 776, 1154
ScrFI CCNGG 3 cut(s) 132, 875, 906
SdaI CCTGCAGG 1 cut(s) 166
SduI GDGCHC 2 cut(s) 880, 1861
SfaNI GCATC 4 cut(s) 16, 2164, 2275, 2413
SfcI CTRYAG 3 cut(s) 162, 549, 771
SfuI TTCGAA 1 cut(s) 1533
SmiMI CAYNNNNRTG 6 cut(s) 114, 885, 1463, 1665, 1752, 1779
SmlI CTYRAG 1 cut(s) 1982
SmoI CTYRAG 1 cut(s) 1982
SpeI ACTAGT 2 cut(s) 821, 1621
Sse8387I CCTGCAGG 1 cut(s) 166
SseBI AGGCCT 2 cut(s) 1194, 1521
SsiI CCGC 5 cut(s) 411, 949, 1323, 1564, 1570
SspI AATATT 3 cut(s) 916, 977, 1101
SspMI CTAG 8 cut(s) 801, 822, 861, 1334, 1526, 1622, 1761, 2124
SstI GAGCTC 1 cut(s) 1861
StuI AGGCCT 2 cut(s) 1194, 1521
StyD4I CCNGG 3 cut(s) 130, 873, 904
StyI CCWWGG 1 cut(s) 1516
TaaI ACNGT 2 cut(s) 101, 396
TaiI ACGT 3 cut(s) 615, 1652, 1680
TaqI TCGA 5 cut(s) 155, 1533, 1556, 1847, 1863
TatI WGTACW 3 cut(s) 713, 1715, 1920
TfiI GAWTC 7 cut(s) 152, 377, 1022, 1670, 1696, 1767, 2096
Tru1I TTAA 5 cut(s) 924, 1214, 1586, 1890, 2253
Tru9I TTAA 5 cut(s) 924, 1214, 1586, 1890, 2253
TscAI CASTG 2 cut(s) 289, 399
TseFI GTSAC 2 cut(s) 887, 1281
TseI GCWGC 3 cut(s) 1724, 1757, 2297
Tsp45I GTSAC 2 cut(s) 887, 1281
TspGWI ACGGA 1 cut(s) 750
TspRI CASTG 2 cut(s) 289, 399
XapI RAATTY 7 cut(s) 139, 385, 446, 1368, 1529, 1710, 2397
XbaI TCTAGA 1 cut(s) 1333
XceI RCATGY 2 cut(s) 1265, 1877
XcmI CCANNNNNNNNNTGG 2 cut(s) 143, 2414
XmnI GAANNNNTTC 2 cut(s) 404, 450
XspI CTAG 8 cut(s) 801, 822, 861, 1334, 1526, 1622, 1761, 2124
Zsp2I ATGCAT 2 cut(s) 1081, 2227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.