RchiOBHm_Chr2g0106811

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000413
Physical Location & Seq
Reverse (-)
18209894 .. 18213278
3385 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48088

Sequence Viewer

Length: 2451 bp
ATGGAACATGTTCATATCCCATTGCTCTCTCTGCTTGTTTTTCTCCTCAACCTCTCATCCCTTCACTTTCTCTCTTTAGCCGATGATTATTACATCAACTGTGGCTCACATGATAATGCGAACCTCACTACTGGCCAGAATTTCTCCGGGGAATCCAAGTCTGGTTACTCTTTCTCCAAAAGCAAGGCTGTCAAAGACATCAACCAGTTGCCAGATATAGCACCTCTATATAAGACAGCAAGAGGTTTCAGTAAAGCATTCTACTACCAGTTCAGCATCACTCAAAATGGTACTTATCTGGTACGCCTACATTTCTTAGCTTTCTCCTCCTCCTCCTCCTCCTCCTCAAATAATCTCTCCACAGCTGTTTTCGGTGTCTTGGATTCTAAGAATTTCACACTGTTGAACAATTTCACTGCCAAGAACAGTACCAACTACCCTGTGATAAAGGAATTCTTTGTCCGAATTGATATTACCGACTCATTTAGACTATATTTTATTCCTCAACCATCATCTTTTGCATTTGTAAATGCCATTGTATTATTCCTTGCCCCTTCAGATTTCATCCCTGAGAACTATATCAGTAATCTCCCTTTACACACAATTTACCGACTGAACGTTGGAGGCTTACCATGGAATGACCCACAAGGGAGAAACTGGGAAACAGATGATAGTCATCTTTCTGATCCAAACTCTGCAAAGAATGCCAATCCTGAAAGTGAACTTAATCTAAATTACTTGCCAGAACCAGTTGATGGTCTATTCCTATCCAACTATACTTTTGCCCCAATTCAGGTTTACGAGACTGCTAAACATATGAGTAACAGTAGTAGCAGGCCAGCCATATCCTCCAACGTAACATGGTTTTTTAGTGTGAGTAGGAAAGCTAGACACATTGTCCGGGCTCACTTCTGTGACATTATTGGTCAGCCTGGTGAGATTATATTTAACTTGTATTCAAATGGCAACTTCCGCAAGGAGATCAGCAACATTTCTCAATATCCGGCTGTTCCTTTCTACTATGACTTTATGGTGAATTCTAGTGAGTCTGAACTCATTAACATCACCATAAAACCTAAGAGTGAATCTGCAGATGCTTTTCTAAATGGTTTGGAAATATTGGAGATAGTGGAGGGATTAGCTCCAATTCCTACTGTCAGAGACTCCAAGAAGAGTATTGTGGCTCCTGTGGTTGGTTCAGTTCTTGGAGGCCTGTCACTCATATGCGTTTTAATAGTTGGATTTGTGTTCGGTTTCAGACACAGAAAGGCGAAAAAACGTGTGGAAACTTCAGTTTGGTCACCAATGCCTGCAAATGGAGGAGGGAGTTCTCACGGCTCCGCTCTCAATCTTAATTACCTTGGGTTGAAGATAGCTTTTAATGAAATTCAGTCTGCAACAAACAACTTTGACACAAAGTTGGTGATAGGTAAGGGTGGCTTTGGGAATGTTTATAGAGGGACTCTCTTGAACGGTACAAAAGTGGCTGTGAAGCGAGCTTATAAGCGACATGAGCGTGGATCAGGTTCAGGCCAAGGTCTCCCAGAATTCGAAACAGAAATCATAGTGTTGTCGAAAATCCGCCACCGCCATCTTGTCTCCTTAATTGGTTACTGTAATGAAAGGTCTGAGATGATACTAGTGTATGAGTTCATGGAAAAAGGGACGTTGAGAGATCATTTGTATGATTCGGATGTGCATCGCTTGTCATGGAAGCAAAGACTTGAAATTTGTACTGGTGCAGCAAGGGGTCTTCATTATCTCCACACAGGTGCAGCTGGGGGAATCATTCACCGTGATGTCAAGTCCACCAACATATTGCTCGATGAAAACCATGTTGCCAAAGTGGCTGACTTTGGCCTTTCAAGATCTGGAGCTCTTGATGAAACGCATGTCAGCACTAATGTTAAAGGCACTTTTGGTTATCTTGATCCTGAGTACATGATGTCTGAACAGTTGACAGAAAAATCTGATGTTTACTCATTTGGTGTGGTTCTACTTGAAGTGTTGTCTGCAAGACCAGCTATTGATCCAACACTTCCAAGAGAGCAAATGAACTTAGCTGAATGGGGAATGCTTTGCCAGAAAAGAGGGGTGCTTGAAGAGATTGTTGATTCTCCACTAAAGGGTCAGATTGATCCTAACTCACTGCGTAAGTTTGGTGAGACAGTTGAGAAGTGTTTGCAAGATGATGCTTGTAATAGGCCAACAATGGAGGATGTGCTGTGGGATTTGGAGTATGCACTACAGCTTCAGCAAACAACAAAGCTTAAAGAGGCTCATGAGGACAGCACAAACATTGATGCTTCATCAGCAGCATTCTCCTTGCCAAATGTTCAGCGTTTTCCTTCACTTGGTTCGACGAGGAATGGAGATGATATCAGGGAAGCCGACTTGGAATCAACAGAAAGTGAAATTTTCTCTCAATTGAAAATTGGTGATGCCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

816

Amino Acids

90.78

Weight (kDa)

6.05

Isoelectric Point (pI)

39.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 31 - 108 1.1e-06 Malectin domain
Malectin_like PF12819 32 - 375 2.3e-19 Malectin-like domain
Pkinase PF00069 473 - 742 1.4e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 474 - 743 1.3e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000413)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23200
fragaria_vesca FvH4_1g16860 FvH4_1g16861
malus_domestica MD02G1018900.v1.1 MD15G1289500.v1.1 MD15G1289600.v1.1 MD15G1289700.v1.1
prunus_persica Prupe.6G227800_v2.0.a1 Prupe.6G228000_v2.0.a1 Prupe.6G228100_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228300_v2.0.a1
pyrus_communis pycom02g01680 pycom02g01690 pycom15g25310 pycom15g25330 pycom15g25340
rosa_chinensis RchiOBHm_Chr1g0324321 RchiOBHm_Chr1g0324331 RchiOBHm_Chr1g0324341 RchiOBHm_Chr1g0324401 RchiOBHm_Chr1g0324441 RchiOBHm_Chr2g0106751 RchiOBHm_Chr2g0106761 RchiOBHm_Chr2g0106771 RchiOBHm_Chr2g0106781 RchiOBHm_Chr2g0106801 RchiOBHm_Chr2g0106811 RchiOBHm_Chr2g0106821
rosa_laevigata RLG00000017539 RLG00000017540 RLG00000017541 RLG00000030200 RLG00000030201
rosa_multiflora Rmu_sc0000751.1_g000001 Rmu_sc0000751.1_g000002 Rmu_sc0000751.1_g000003 Rmu_sc0000751.1_g000005 Rmu_sc0000751.1_g000007 Rmu_sc0000751.1_g000008 Rmu_sc0000751.1_g000018 Rmu_sc0000751.1_g000019 Rmu_sc0000751.1_g000026 Rmu_sc0000751.1_g000027 Rmu_sc0000751.1_g000028 Rmu_sc0000751.1_g000029 Rmu_sc0003410.1_g000012 Rmu_sc0004000.1_g000023 Rmu_sc0004000.1_g000024 Rmu_sc0004082.1_g000015 Rmu_sc0004082.1_g000017 Rmu_sc0026507.1_g000001 Rmu_sc0031196.1_g000001 Rmu_sc0039591.1_g000001
rosa_roxburghii Rroxscaffold_159G00432710 Rroxscaffold_159G00432780 Rroxscaffold_159G00432840 Rroxscaffold_159G00433010 Rroxscaffold_2G00098070 Rroxscaffold_2G00136770 Rroxscaffold_4G00325540 Rroxscaffold_4G00325630 Rroxscaffold_4G00325680
rosa_rugosa Rorug01G0045700 Rorug02G0138500 Rorug02G0138600 Rorug02G0138700 Rorug02G0138800 Rorug02G0138900
rosa_samantha Rh1AG061400 Rh1BG052300 Rh1CG063400 Rh1CG063700 Rh1DG067800 Rh2AG189400 Rh2AG189800 Rh2AG190000 Rh2AG190100 Rh2BG201100 Rh2BG201300 Rh2CG194500 Rh2CG194600 Rh2CG194700 Rh2DG195700 Rh2DG195900 Rh2DG196300 Rh2DG196400 Rh2DG196500 Rh2DG196600
rosa_wichuraiana Rw1G004230 Rw1G005210 Rw2G014900 Rw2G014910 Rw2G014930 Rw2G014940 Rw2G014950 Rw2G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1503
AccB7I CCANNNNNTGG 1 cut(s) 755
AccBSI CCGCTC 1 cut(s) 1343
AciI CCGC 4 cut(s) 973, 1341, 1582, 1588
AclI AACGTT 1 cut(s) 618
AclWI GGATC 5 cut(s) 680, 1528, 1925, 2024, 2132
AcoI YGGCCR 1 cut(s) 133
AcsI RAATTY 8 cut(s) 139, 391, 452, 1036, 1386, 1547, 1728, 2415
AcuI CTGAAG 3 cut(s) 540, 1275, 2237
AfaI GTAC 6 cut(s) 292, 303, 430, 1477, 1735, 1940
AfiI CCNNNNNNNGG 6 cut(s) 755, 793, 1193, 1316, 2126, 2354
AflIII ACRYGT 2 cut(s) 7, 1279
AgsI TTSAA 9 cut(s) 406, 960, 1369, 1471, 1727, 1866, 2003, 2102, 2431
AhdI GACNNNNNGTC 1 cut(s) 896
AhlI ACTAGT 1 cut(s) 1639
AjnI CCWGG 1 cut(s) 931
AleI CACNNNNGTG 2 cut(s) 912, 1770
Alw21I GWGCWC 1 cut(s) 1879
Alw26I GTCTC 5 cut(s) 797, 1155, 1544, 1603, 2159
AlwI GGATC 5 cut(s) 680, 1528, 1925, 2024, 2132
AoxI GGCC 6 cut(s) 133, 836, 1210, 1531, 1858, 2204
ApeKI GCWGC 3 cut(s) 1742, 1775, 2315
ApoI RAATTY 8 cut(s) 139, 391, 452, 1036, 1386, 1547, 1728, 2415
ArsI GACNNNNNNTTYG 2 cut(s) 1713, 1745
Asp700I GAANNNNTTC 2 cut(s) 9, 410
AsuC2I CCSGG 2 cut(s) 148, 902
AsuHPI GGTGA 8 cut(s) 947, 1045, 1057, 1293, 1435, 1784, 2174, 2450
AsuII TTCGAA 1 cut(s) 1551
BaeI ACNNNNGTAYC 4 cut(s) 1467, 1500, 1628, 1661
BalI TGGCCA 1 cut(s) 135
BanII GRGCYC 2 cut(s) 907, 1879
BbsI GAAGAC 1 cut(s) 1745
Bbv12I GWGCWC 1 cut(s) 1879
BbvI GCAGC 3 cut(s) 1754, 1787, 2327
BccI CCATC 3 cut(s) 517, 749, 1599
BceAI ACGGC 1 cut(s) 1351
BciT130I CCWGG 1 cut(s) 933
BcnI CCSGG 2 cut(s) 148, 902
BcoDI GTCTC 5 cut(s) 797, 1155, 1544, 1603, 2159
BcuI ACTAGT 1 cut(s) 1639
BfaI CTAG 3 cut(s) 888, 1041, 1640
BfmI CTRYAG 2 cut(s) 1089, 2246
BglI GCCNNNNNGGC 1 cut(s) 1847
BglII AGATCT 1 cut(s) 1868
BisI GCNGC 3 cut(s) 1743, 1776, 2316
BlsI GCNGC 3 cut(s) 1744, 1777, 2317
Bme1390I CCNGG 3 cut(s) 148, 902, 933
BmeRI GACNNNNNGTC 1 cut(s) 896
BmiI GGNNCC 2 cut(s) 1185, 1339
BmrFI CCNGG 3 cut(s) 148, 902, 933
BmrI ACTGGG 1 cut(s) 667
BmsI GCATC 6 cut(s) 285, 1084, 1708, 2182, 2293, 2431
BmuI ACTGGG 1 cut(s) 667
BpiI GAAGAC 1 cut(s) 1745
BplI GAGNNNNNCTC 2 cut(s) 1449, 1481
BpmI CTGGAG 1 cut(s) 1893
Bpu14I TTCGAA 1 cut(s) 1551
BpuMI CCSGG 2 cut(s) 148, 902
BsaBI GATNNNNATC 2 cut(s) 675, 1698
BsaI GGTCTC 1 cut(s) 1544
BsaJI CCNNGG 4 cut(s) 147, 632, 1360, 1534
BsaXI ACNNNNNCTCC 2 cut(s) 158, 188
Bsc4I CCNNNNNNNGG 6 cut(s) 755, 793, 1193, 1316, 2126, 2354
Bse1I ACTGG 6 cut(s) 136, 205, 268, 662, 749, 1741
Bse3DI GCAATG 1 cut(s) 20
Bse8I GATNNNNATC 2 cut(s) 675, 1698
BseBI CCWGG 1 cut(s) 933
BseDI CCNNGG 4 cut(s) 147, 632, 1360, 1534
BseGI GGATG 4 cut(s) 56, 564, 1699, 2224
BseJI GATNNNNATC 2 cut(s) 675, 1698
BseLI CCNNNNNNNGG 6 cut(s) 755, 793, 1193, 1316, 2126, 2354
BseMI GCAATG 1 cut(s) 20
BseMII CTCAG 3 cut(s) 561, 1620, 1926
BseNI ACTGG 6 cut(s) 136, 205, 268, 662, 749, 1741
BseRI GAGGAG 9 cut(s) 35, 316, 319, 322, 325, 328, 331, 334, 1335
BseXI GCAGC 3 cut(s) 1754, 1787, 2327
BseYI CCCAGC 1 cut(s) 1778
BsgI GTGCAG 2 cut(s) 1761, 1794
BshFI GGCC 6 cut(s) 135, 838, 1212, 1533, 1860, 2206
BsiHKAI GWGCWC 1 cut(s) 1879
BsiSI CCGG 3 cut(s) 147, 901, 1004
BslFI GGGAC 2 cut(s) 1474, 1678
BslI CCNNNNNNNGG 6 cut(s) 755, 793, 1193, 1316, 2126, 2354
BsmAI GTCTC 5 cut(s) 797, 1155, 1544, 1603, 2159
BsmFI GGGAC 2 cut(s) 1474, 1678
BsmI GAATGC 4 cut(s) 257, 709, 2079, 2318
BsnI GGCC 6 cut(s) 135, 838, 1212, 1533, 1860, 2206
Bso31I GGTCTC 1 cut(s) 1544
Bsp119I TTCGAA 1 cut(s) 1551
Bsp1286I GDGCHC 2 cut(s) 907, 1879
Bsp143I GATC 8 cut(s) 685, 981, 1520, 1675, 1868, 1930, 2029, 2137
Bsp19I CCATGG 1 cut(s) 632
BspACI CCGC 4 cut(s) 973, 1341, 1582, 1588
BspANI GGCC 6 cut(s) 135, 838, 1212, 1533, 1860, 2206
BspCNI CTCAG 3 cut(s) 562, 1621, 1927
BspHI TCATGA 1 cut(s) 2281
BspLI GGNNCC 2 cut(s) 1185, 1339
BspMAI CTGCAG 1 cut(s) 1093
BspPI GGATC 5 cut(s) 680, 1528, 1925, 2024, 2132
BspT104I TTCGAA 1 cut(s) 1551
BspTNI GGTCTC 1 cut(s) 1544
BsrBI CCGCTC 1 cut(s) 1343
BsrDI GCAATG 1 cut(s) 20
BsrI ACTGG 6 cut(s) 136, 205, 268, 662, 749, 1741
BssECI CCNNGG 4 cut(s) 147, 632, 1360, 1534
BssMI GATC 8 cut(s) 685, 981, 1520, 1675, 1868, 1930, 2029, 2137
BssT1I CCWWGG 3 cut(s) 632, 1360, 1534
Bst2UI CCWGG 1 cut(s) 933
Bst6I CTCTTC 2 cut(s) 1166, 2097
BstAPI GCANNNNNTGC 1 cut(s) 704
BstBI TTCGAA 1 cut(s) 1551
BstC8I GCNNGC 4 cut(s) 836, 840, 1311, 1497
BstDEI CTNAG 7 cut(s) 316, 387, 570, 1077, 1629, 1935, 2059
BstDSI CCRYGG 1 cut(s) 632
BstEII GGTNACC 1 cut(s) 1299
BstF5I GGATG 4 cut(s) 56, 564, 1699, 2224
BstKTI GATC 8 cut(s) 688, 984, 1523, 1678, 1871, 1933, 2032, 2140
BstMAI GTCTC 5 cut(s) 797, 1155, 1544, 1603, 2159
BstMBI GATC 8 cut(s) 685, 981, 1520, 1675, 1868, 1930, 2029, 2137
BstMWI GCNNNNNNNGC 7 cut(s) 31, 704, 972, 1513, 1847, 2021, 2312
BstNI CCWGG 1 cut(s) 933
BstNSI RCATGY 2 cut(s) 11, 1895
BstPI GGTNACC 1 cut(s) 1299
BstSCI CCNGG 3 cut(s) 146, 900, 931
BstSFI CTRYAG 2 cut(s) 1089, 2246
BstV1I GCAGC 3 cut(s) 1754, 1787, 2327
BstV2I GAAGAC 1 cut(s) 1745
BstX2I RGATCY 1 cut(s) 1868
BstYI RGATCY 1 cut(s) 1868
BsuRI GGCC 6 cut(s) 135, 838, 1212, 1533, 1860, 2206
BtgI CCRYGG 1 cut(s) 632
BtgZI GCGATG 1 cut(s) 1685
BtsCI GGATG 4 cut(s) 56, 564, 1699, 2224
BtsI GCAGTG 2 cut(s) 414, 2147
BtsIMutI CAGTG 3 cut(s) 398, 414, 2147
Cac8I GCNNGC 4 cut(s) 836, 840, 1311, 1497
CciI TCATGA 1 cut(s) 2281
Csp6I GTAC 6 cut(s) 291, 302, 429, 1476, 1734, 1939
CviQI GTAC 6 cut(s) 291, 302, 429, 1476, 1734, 1939
DdeI CTNAG 7 cut(s) 316, 387, 570, 1077, 1629, 1935, 2059
DpnI GATC 8 cut(s) 687, 983, 1522, 1677, 1870, 1932, 2031, 2139
DpnII GATC 8 cut(s) 685, 981, 1520, 1675, 1868, 1930, 2029, 2137
DriI GACNNNNNGTC 1 cut(s) 896
EaeI YGGCCR 1 cut(s) 133
Eam1104I CTCTTC 2 cut(s) 1166, 2097
Eam1105I GACNNNNNGTC 1 cut(s) 896
EarI CTCTTC 2 cut(s) 1166, 2097
EciI GGCGGA 1 cut(s) 1571
Ecl136II GAGCTC 1 cut(s) 1877
Eco130I CCWWGG 3 cut(s) 632, 1360, 1534
Eco147I AGGCCT 1 cut(s) 1212
Eco24I GRGCYC 2 cut(s) 907, 1879
Eco31I GGTCTC 1 cut(s) 1544
Eco32I GATATC 1 cut(s) 2380
Eco53kI GAGCTC 1 cut(s) 1877
Eco57I CTGAAG 3 cut(s) 540, 1275, 2237
Eco91I GGTNACC 1 cut(s) 1299
EcoICRI GAGCTC 1 cut(s) 1877
EcoO65I GGTNACC 1 cut(s) 1299
EcoRI GAATTC 3 cut(s) 452, 1036, 1547
EcoRII CCWGG 1 cut(s) 931
EcoRV GATATC 1 cut(s) 2380
EcoT14I CCWWGG 3 cut(s) 632, 1360, 1534
EcoT38I GRGCYC 2 cut(s) 907, 1879
ErhI CCWWGG 3 cut(s) 632, 1360, 1534
FalI AAGNNNNNCTT 4 cut(s) 440, 472, 1424, 1456
FaqI GGGAC 2 cut(s) 1474, 1678
FauNDI CATATG 2 cut(s) 816, 1223
Fnu4HI GCNGC 3 cut(s) 1743, 1776, 2316
FokI GGATG 4 cut(s) 43, 551, 1706, 2231
FriOI GRGCYC 2 cut(s) 907, 1879
Fsp4HI GCNGC 3 cut(s) 1743, 1776, 2316
FspBI CTAG 3 cut(s) 888, 1041, 1640
GluI GCNGC 3 cut(s) 1743, 1776, 2316
GsaI CCCAGC 1 cut(s) 1782
GsuI CTGGAG 1 cut(s) 1893
HaeIII GGCC 6 cut(s) 135, 838, 1212, 1533, 1860, 2206
HapII CCGG 3 cut(s) 147, 901, 1004
HincII GTYRAC 1 cut(s) 1959
HindII GTYRAC 1 cut(s) 1959
HindIII AAGCTT 1 cut(s) 2267
HpaII CCGG 3 cut(s) 147, 901, 1004
HphI GGTGA 8 cut(s) 947, 1045, 1057, 1293, 1435, 1784, 2174, 2450
Hpy166II GTNNAC 5 cut(s) 722, 799, 1809, 1959, 1978
Hpy188III TCNNGA 8 cut(s) 713, 1468, 1866, 1872, 1880, 1928, 1934, 2282
Hpy8I GTNNAC 5 cut(s) 722, 799, 1809, 1959, 1978
Hpy99I CGWCG 1 cut(s) 2365
HpyAV CCTTC 3 cut(s) 71, 564, 2358
HpyCH4IV ACGT 4 cut(s) 618, 855, 1279, 1667
HpyF10VI GCNNNNNNNGC 7 cut(s) 31, 704, 972, 1513, 1847, 2021, 2312
HpyF3I CTNAG 7 cut(s) 316, 387, 570, 1077, 1629, 1935, 2059
HpySE526I ACGT 4 cut(s) 618, 855, 1279, 1667
Kzo9I GATC 8 cut(s) 685, 981, 1520, 1675, 1868, 1930, 2029, 2137
LmnI GCTCC 4 cut(s) 1147, 1189, 1343, 1874
Lsp1109I GCAGC 3 cut(s) 1754, 1787, 2327
LweI GCATC 6 cut(s) 285, 1084, 1708, 2182, 2293, 2431
MaeI CTAG 3 cut(s) 888, 1041, 1640
MaeII ACGT 4 cut(s) 618, 855, 1279, 1667
MaeIII GTNAC 7 cut(s) 164, 821, 856, 914, 1215, 1299, 1610
MalI GATC 8 cut(s) 687, 983, 1522, 1677, 1870, 1932, 2031, 2139
MbiI CCGCTC 1 cut(s) 1343
MboI GATC 8 cut(s) 685, 981, 1520, 1675, 1868, 1930, 2029, 2137
MboII GAAGA 4 cut(s) 1183, 1381, 1745, 2114
MfeI CAATTG 1 cut(s) 2426
MflI RGATCY 1 cut(s) 1868
MhlI GDGCHC 2 cut(s) 907, 1879
MlsI TGGCCA 1 cut(s) 135
MluNI TGGCCA 1 cut(s) 135
MlyI GAGTC 4 cut(s) 473, 1055, 1157, 1456
MmeI TCCRAC 5 cut(s) 601, 795, 876, 1219, 2057
Mox20I TGGCCA 1 cut(s) 135
MroXI GAANNNNTTC 2 cut(s) 9, 410
MscI TGGCCA 1 cut(s) 135
MseI TTAA 9 cut(s) 726, 948, 1059, 1232, 1353, 1380, 1604, 1908, 2271
MslI CAYNNNNRTG 7 cut(s) 114, 912, 1222, 1515, 1683, 1770, 1797
Msp20I TGGCCA 1 cut(s) 135
MspA1I CMGCKG 2 cut(s) 365, 1778
MspI CCGG 3 cut(s) 147, 901, 1004
MspR9I CCNGG 3 cut(s) 148, 902, 933
MunI CAATTG 1 cut(s) 2426
Mva1269I GAATGC 4 cut(s) 257, 709, 2079, 2318
MvaI CCWGG 1 cut(s) 933
MwoI GCNNNNNNNGC 7 cut(s) 31, 704, 972, 1513, 1847, 2021, 2312
NciI CCSGG 2 cut(s) 148, 902
NcoI CCATGG 1 cut(s) 632
NdeI CATATG 2 cut(s) 816, 1223
NdeII GATC 8 cut(s) 685, 981, 1520, 1675, 1868, 1930, 2029, 2137
NlaIV GGNNCC 2 cut(s) 1185, 1339
NmuCI GTSAC 3 cut(s) 914, 1215, 1299
NspI RCATGY 2 cut(s) 11, 1895
NspV TTCGAA 1 cut(s) 1551
OliI CACNNNNGTG 2 cut(s) 912, 1770
PagI TCATGA 1 cut(s) 2281
PceI AGGCCT 1 cut(s) 1212
PciI ACATGT 1 cut(s) 7
PctI GAATGC 4 cut(s) 257, 709, 2079, 2318
PdmI GAANNNNTTC 2 cut(s) 9, 410
PfeI GAWTC 7 cut(s) 152, 383, 1085, 1688, 1785, 2114, 2399
PflMI CCANNNNNTGG 1 cut(s) 755
PkrI GCNGC 3 cut(s) 1744, 1777, 2317
PleI GAGTC 4 cut(s) 473, 1054, 1157, 1456
PpsI GAGTC 4 cut(s) 473, 1054, 1157, 1456
PscI ACATGT 1 cut(s) 7
PsiI TTATAA 1 cut(s) 1503
Psp124BI GAGCTC 1 cut(s) 1879
Psp1406I AACGTT 1 cut(s) 618
Psp6I CCWGG 1 cut(s) 931
PspEI GGTNACC 1 cut(s) 1299
PspFI CCCAGC 1 cut(s) 1778
PspGI CCWGG 1 cut(s) 931
PspN4I GGNNCC 2 cut(s) 1185, 1339
PstI CTGCAG 1 cut(s) 1093
PsuI RGATCY 1 cut(s) 1868
PvuII CAGCTG 2 cut(s) 365, 1778
RsaI GTAC 6 cut(s) 292, 303, 430, 1477, 1735, 1940
RsaNI GTAC 6 cut(s) 291, 302, 429, 1476, 1734, 1939
RseI CAYNNNNRTG 7 cut(s) 114, 912, 1222, 1515, 1683, 1770, 1797
SacI GAGCTC 1 cut(s) 1879
SaqAI TTAA 9 cut(s) 726, 948, 1059, 1232, 1353, 1380, 1604, 1908, 2271
SatI GCNGC 3 cut(s) 1743, 1776, 2316
Sau3AI GATC 8 cut(s) 685, 981, 1520, 1675, 1868, 1930, 2029, 2137
SchI GAGTC 4 cut(s) 473, 1055, 1157, 1456
ScrFI CCNGG 3 cut(s) 148, 902, 933
SduI GDGCHC 2 cut(s) 907, 1879
SfaNI GCATC 6 cut(s) 285, 1084, 1708, 2182, 2293, 2431
SfcI CTRYAG 2 cut(s) 1089, 2246
SfuI TTCGAA 1 cut(s) 1551
SmiMI CAYNNNNRTG 7 cut(s) 114, 912, 1222, 1515, 1683, 1770, 1797
SpeI ACTAGT 1 cut(s) 1639
SseBI AGGCCT 1 cut(s) 1212
SsiI CCGC 4 cut(s) 973, 1341, 1582, 1588
SspI AATATT 1 cut(s) 1119
SspMI CTAG 3 cut(s) 888, 1041, 1640
SstI GAGCTC 1 cut(s) 1879
StuI AGGCCT 1 cut(s) 1212
StyD4I CCNGG 3 cut(s) 146, 900, 931
StyI CCWWGG 3 cut(s) 632, 1360, 1534
TaiI ACGT 4 cut(s) 621, 858, 1282, 1670
TaqI TCGA 4 cut(s) 1551, 1574, 1824, 2360
TatI WGTACW 2 cut(s) 1733, 1938
TfiI GAWTC 7 cut(s) 152, 383, 1085, 1688, 1785, 2114, 2399
Tru1I TTAA 9 cut(s) 726, 948, 1059, 1232, 1353, 1380, 1604, 1908, 2271
Tru9I TTAA 9 cut(s) 726, 948, 1059, 1232, 1353, 1380, 1604, 1908, 2271
TscAI CASTG 3 cut(s) 405, 421, 2154
TseFI GTSAC 3 cut(s) 914, 1215, 1299
TseI GCWGC 3 cut(s) 1742, 1775, 2315
Tsp45I GTSAC 3 cut(s) 914, 1215, 1299
TspDTI ATGAA 9 cut(s) 553, 1398, 1635, 1642, 1745, 1842, 1899, 2069, 2298
TspRI CASTG 3 cut(s) 405, 421, 2154
Van91I CCANNNNNTGG 1 cut(s) 755
XapI RAATTY 8 cut(s) 139, 391, 452, 1036, 1386, 1547, 1728, 2415
XceI RCATGY 2 cut(s) 11, 1895
XmnI GAANNNNTTC 2 cut(s) 9, 410
XspI CTAG 3 cut(s) 888, 1041, 1640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.