RchiOBHm_Chr2g0106771

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000413
Physical Location & Seq
Reverse (-)
18165182 .. 18167915
2734 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48084

Sequence Viewer

Length: 2400 bp
ATGGAAAATCCTCATAATTGTAGAACCCTCCATATCCCTTTGTTTTCTCAGCTTGTTCTTCTCCTTCAGTTCTCATCCCTTCACTTTCTCTCTTTAGCTTATGAAGTCCAAGAAAAGTATTTCGTCAATTGTGGATCAGATGCTAATCTGGACCTCAATGGTCGGAATTTCATTGGGGATTTGAAGCCTGATTCCTTCTCTTTCTCAAAGGGAAGTGAGACTATCAAAGGCACCAACCTTACGATATCAAGTCTCTACCAGACAGCAAGAGTTTTCAGTCAACAATCCTACTACAATTTCGAAATCACTGAAACCGGTACTTATCTGGTACGCCTGCACTTCTTTCCCTTTTCTTCGGCCTCAAGTAATCTTTCTACTGGAATTTTTAATGTTTCGGATTCCAAGTTCACTCTGTTGAACAATTTCACTAGCGACTCTGCTATAATAAAGGAATTCTTTCTTGGAATTAATAGTACCGACTCATTTAAACTATATTTTACACCTCAATCATCATCTTTTGCTTTTGTAAACGCCATTGAAGTCTTCCTTGCACCTTCAAATTTCACCCCTGAGAATTACAACAGTAATCTTCCTTTACACACAACTTACCGAGTGAATGTTGGAGGCCCAGTGCTCTCACCAGATAATGACGTCACAATATGGAGAAACTGGGAAAAAGATTATATTTATCTGTCTGATCCCAACTCTGCCAAAGATGTTCCTAACCAAAATACCCAGCTTAATTATACGTACTATAATAAGGATCAAGCTGATGATTTTGTTGCATCTACTAATTTTATTGCCCCGGATTTGGTTTACCAGACAGCTAAAGAGATGACTGGCAATTCCTCCAACATAACATGGTCATTTAGTGTGAGGAGGAATGCTAGGTACATTGTCCGTGCACACTTCTGTGACATTGTTTCTGTTTCCGCTCATACTATAGTGTTTGATTTGTATTCGAATGGCAACTTCCGTAAGCAGATCTTTGGACTGGATTCCCCTTTTGTTCAAGCGTTGGCTACTCCTTTCTACTATGATTTTGTGGTGAATGCTACTGATTCTAAACTCATTAACATCAGAATAGCCCCTAACTTGACCAATACAACAATAGAAAATGCCTTTCTGAATGGGCTGGAAATATTGGAGATATTGGAGGGAACAGCTCTAATTTATAATTTGGAAGAGTCCAAGAAGGTAAGTGTGGCTCTTGTGGTTGGATCAGTTCTCGGAGGAGGCCTGTTTCTTTTCATCATTGGATTCATGTTGTGTTTGAGACACAAAAAGGCGAGAAAGAGGAACAGAGGAGGGATTTCCCACAACCTTGGGTTGAAGATATCTTTTGCTCAAATCCGGTCTGCAACAAACAACTTTGATCCGAAAATGCAGATAGGTGTGGGTGGTTTTGGGTATGTTTATAAAGGAACTCTCTCTAATGGCACCAAAGTGGCTGTGAAGCGTTGTAAGCAAGAGGGGCAAAGGTCAGGCCAAGGCCTTCCAGAATTCGAAACAGAAATCATAGTGTTGTCCAAAATCCGCCACCGCCATCTTGTCTCCTTAATTGGTTACTGTGATGAAGGGTCTGAGATGATACTAGTGTATGAGTTCATGGAAAAAGGGACCTTGAGAGATCATTTGTATGAATCGGATGTGCCTCGCTTGTCGTGGAAGCAAAGACTTGAAATTTGCATAGGTTCAGCAACTGGACTTGATTATCTTCATAAAGGTGCAGCAGGGGGCATCATCCACCGTGATGTGAAGTCCACCAACATATTGCTTGATGAGAACCTTGTTGCTAAAGTCGCTGACTTCGGGCTTTCGAGGTCTGGCCCTCTTGATGAAACTCATGTCAGCACGGTTGTGAAAGGCACTATCGGTTACCTTGATCCCGAGTACATGATGTCACAGCAGCTGACAGAGAAGTCTGATGTGTACTCATTTGGTGTAGTTCTTCTTGAGGTGTTATGTGGAAGACCTGCTATTGATATAACGCTTCCAAGAGAGAAAGTGAACTTAGCTGAATGGGTTGTGCTGTGCAAGAAAGAAGGGTTGCTAGAAGAGGTCATTGACGTTTCATTGAAGGGTCATATTGATCCTAGCTCACTGAGACATTTTATTGAGACTGCAGAGAAGTGTTTGCAACACGATTCTTCTGATAGGCCCACTATGGCTGAGGTGCTGTGGGATTTGGACTATACATTGAAGCTTCATCAAACTGCGAGGCTTGGAGAAGCCCATGAGGACAGCACTACAAGTGCTTCATCAGCTTTTTTACTACCAAATATTCGGCATTTTGCTTCACTTGATTCGACAGTTAACAGAGCTGATATGAGGGACGATGAGATGGAGTCCACAGAAAGCGAAATTTTCTCCCAACTGAGAATCGGCGAGGCCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

799

Amino Acids

89.58

Weight (kDa)

5.71

Isoelectric Point (pI)

35.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 40 - 119 2.8e-06 Malectin domain
Malectin_like PF12819 42 - 383 4.9e-25 Malectin-like domain
Pkinase PF00069 461 - 727 2.1e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 462 - 728 1.9e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000413)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23200
fragaria_vesca FvH4_1g16860 FvH4_1g16861
malus_domestica MD02G1018900.v1.1 MD15G1289500.v1.1 MD15G1289600.v1.1 MD15G1289700.v1.1
prunus_persica Prupe.6G227800_v2.0.a1 Prupe.6G228000_v2.0.a1 Prupe.6G228100_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228300_v2.0.a1
pyrus_communis pycom02g01680 pycom02g01690 pycom15g25310 pycom15g25330 pycom15g25340
rosa_chinensis RchiOBHm_Chr1g0324321 RchiOBHm_Chr1g0324331 RchiOBHm_Chr1g0324341 RchiOBHm_Chr1g0324401 RchiOBHm_Chr1g0324441 RchiOBHm_Chr2g0106751 RchiOBHm_Chr2g0106761 RchiOBHm_Chr2g0106771 RchiOBHm_Chr2g0106781 RchiOBHm_Chr2g0106801 RchiOBHm_Chr2g0106811 RchiOBHm_Chr2g0106821
rosa_laevigata RLG00000017539 RLG00000017540 RLG00000017541 RLG00000030200 RLG00000030201
rosa_multiflora Rmu_sc0000751.1_g000001 Rmu_sc0000751.1_g000002 Rmu_sc0000751.1_g000003 Rmu_sc0000751.1_g000005 Rmu_sc0000751.1_g000007 Rmu_sc0000751.1_g000008 Rmu_sc0000751.1_g000018 Rmu_sc0000751.1_g000019 Rmu_sc0000751.1_g000026 Rmu_sc0000751.1_g000027 Rmu_sc0000751.1_g000028 Rmu_sc0000751.1_g000029 Rmu_sc0003410.1_g000012 Rmu_sc0004000.1_g000023 Rmu_sc0004000.1_g000024 Rmu_sc0004082.1_g000015 Rmu_sc0004082.1_g000017 Rmu_sc0026507.1_g000001 Rmu_sc0031196.1_g000001 Rmu_sc0039591.1_g000001
rosa_roxburghii Rroxscaffold_159G00432710 Rroxscaffold_159G00432780 Rroxscaffold_159G00432840 Rroxscaffold_159G00433010 Rroxscaffold_2G00098070 Rroxscaffold_2G00136770 Rroxscaffold_4G00325540 Rroxscaffold_4G00325630 Rroxscaffold_4G00325680
rosa_rugosa Rorug01G0045700 Rorug02G0138500 Rorug02G0138600 Rorug02G0138700 Rorug02G0138800 Rorug02G0138900
rosa_samantha Rh1AG061400 Rh1BG052300 Rh1CG063400 Rh1CG063700 Rh1DG067800 Rh2AG189400 Rh2AG189800 Rh2AG190000 Rh2AG190100 Rh2BG201100 Rh2BG201300 Rh2CG194500 Rh2CG194600 Rh2CG194700 Rh2DG195700 Rh2DG195900 Rh2DG196300 Rh2DG196400 Rh2DG196500 Rh2DG196600
rosa_wichuraiana Rw1G004230 Rw1G005210 Rw2G014900 Rw2G014910 Rw2G014930 Rw2G014940 Rw2G014950 Rw2G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1176, 1419
AasI GACNNNNNNGTC 1 cut(s) 1921
AatII GACGTC 1 cut(s) 654
Acc36I ACCTGC 1 cut(s) 1984
AccB1I GGYRCC 2 cut(s) 230, 1439
AccBSI CCGCTC 1 cut(s) 935
AciI CCGC 3 cut(s) 933, 1537, 1543
AclWI GGATC 7 cut(s) 142, 692, 771, 1228, 1370, 1880, 2087
AcsI RAATTY 7 cut(s) 166, 381, 452, 559, 1502, 1683, 2364
AcuI CTGAAG 1 cut(s) 50
AcyI GRCGYC 1 cut(s) 651
AfaI GTAC 7 cut(s) 319, 330, 475, 752, 893, 1895, 1934
AfiI CCNNNNNNNGG 1 cut(s) 811
AgeI ACCGGT 1 cut(s) 314
AgsI TTSAA 9 cut(s) 184, 418, 539, 558, 1013, 1333, 1682, 2080, 2203
AhlI ACTAGT 1 cut(s) 1594
AjuI GAANNNNNNNTTGG 2 cut(s) 444, 476
AleI CACNNNNGTG 3 cut(s) 912, 1445, 1859
AloI GAACNNNNNNTCC 2 cut(s) 389, 421
Alw21I GWGCWC 2 cut(s) 636, 907
Alw26I GTCTC 6 cut(s) 212, 257, 1270, 1558, 2101, 2114
Alw44I GTGCAC 1 cut(s) 903
AlwI GGATC 7 cut(s) 142, 692, 771, 1228, 1370, 1880, 2087
AlwNI CAGNNNCTG 2 cut(s) 1703, 1912
Ama87I CYCGRG 1 cut(s) 1889
AoxI GGCC 8 cut(s) 357, 625, 1237, 1486, 1492, 1828, 2159, 2391
ApaLI GTGCAC 1 cut(s) 903
ApeKI GCWGC 2 cut(s) 1730, 1909
ApoI RAATTY 7 cut(s) 166, 381, 452, 559, 1502, 1683, 2364
ArsI GACNNNNNNTTYG 2 cut(s) 1668, 1700
AseI ATTAAT 1 cut(s) 468
AsiGI ACCGGT 1 cut(s) 314
Asp700I GAANNNNTTC 2 cut(s) 422, 456
AspS9I GGNCC 5 cut(s) 151, 626, 1620, 1829, 2160
AsuC2I CCSGG 1 cut(s) 806
AsuHPI GGTGA 3 cut(s) 556, 630, 1060
AsuII TTCGAA 3 cut(s) 300, 962, 1506
AvaI CYCGRG 1 cut(s) 1889
AvaII GGWCC 2 cut(s) 151, 1620
BaeGI GKGCMC 1 cut(s) 907
BaeI ACNNNNGTAYC 2 cut(s) 1583, 1616
BanI GGYRCC 2 cut(s) 230, 1439
BbsI GAAGAC 2 cut(s) 535, 1978
Bbv12I GWGCWC 2 cut(s) 636, 907
BbvCI CCTCAGC 1 cut(s) 2172
BbvI GCAGC 2 cut(s) 1742, 1921
BccI CCATC 2 cut(s) 1554, 2338
BcnI CCSGG 1 cut(s) 806
BcoDI GTCTC 6 cut(s) 212, 257, 1270, 1558, 2101, 2114
BcuI ACTAGT 1 cut(s) 1594
BfaI CTAG 5 cut(s) 429, 888, 1595, 2054, 2097
BfmI CTRYAG 2 cut(s) 942, 2124
BfuAI ACCTGC 1 cut(s) 1984
BglII AGATCT 1 cut(s) 984
BisI GCNGC 2 cut(s) 1731, 1910
BlsI GCNGC 2 cut(s) 1732, 1911
Bme1390I CCNGG 1 cut(s) 806
Bme18I GGWCC 2 cut(s) 151, 1620
BmeT110I CYCGRG 1 cut(s) 1889
BmgT120I GGNCC 5 cut(s) 151, 626, 1620, 1829, 2160
BmiI GGNNCC 3 cut(s) 232, 1441, 1621
BmrFI CCNGG 1 cut(s) 806
BmrI ACTGGG 2 cut(s) 623, 679
BmsI GCATC 3 cut(s) 130, 794, 1749
BmuI ACTGGG 2 cut(s) 623, 679
BpiI GAAGAC 2 cut(s) 535, 1978
Bpu10I CCTNAGC 1 cut(s) 2172
Bpu14I TTCGAA 3 cut(s) 300, 962, 1506
BpuEI CTTGAG 3 cut(s) 346, 1645, 1976
BpuMI CCSGG 1 cut(s) 806
BsaAI YACGTR 1 cut(s) 750
BsaBI GATNNNNATC 1 cut(s) 144
BsaHI GRCGYC 1 cut(s) 651
BsaJI CCNNGG 3 cut(s) 804, 1324, 1489
BsaWI WCCGGW 2 cut(s) 314, 1353
BsaXI ACNNNNNCTCC 2 cut(s) 615, 645
Bsc4I CCNNNNNNNGG 1 cut(s) 811
Bse118I RCCGGY 1 cut(s) 314
Bse1I ACTGG 6 cut(s) 382, 629, 674, 844, 999, 1708
Bse8I GATNNNNATC 1 cut(s) 144
BseDI CCNNGG 3 cut(s) 804, 1324, 1489
BseGI GGATG 3 cut(s) 74, 1654, 1743
BseJI GATNNNNATC 1 cut(s) 144
BseLI CCNNNNNNNGG 1 cut(s) 811
BseMII CTCAG 6 cut(s) 62, 561, 1575, 2096, 2163, 2369
BseNI ACTGG 6 cut(s) 382, 629, 674, 844, 999, 1708
BseRI GAGGAG 3 cut(s) 892, 1248, 1320
BseSI GKGCMC 1 cut(s) 907
BseXI GCAGC 2 cut(s) 1742, 1921
BseYI CCCAGC 1 cut(s) 735
BsgI GTGCAG 2 cut(s) 320, 1749
BshFI GGCC 8 cut(s) 359, 627, 1239, 1488, 1494, 1830, 2161, 2393
BshNI GGYRCC 2 cut(s) 230, 1439
BshTI ACCGGT 1 cut(s) 314
BsiHKAI GWGCWC 2 cut(s) 636, 907
BsiHKCI CYCGRG 1 cut(s) 1889
BsiSI CCGG 3 cut(s) 315, 806, 1354
BslFI GGGAC 2 cut(s) 1633, 2348
BslI CCNNNNNNNGG 1 cut(s) 811
BsmAI GTCTC 6 cut(s) 212, 257, 1270, 1558, 2101, 2114
BsmFI GGGAC 2 cut(s) 1633, 2348
BsmI GAATGC 2 cut(s) 889, 1057
BsnI GGCC 8 cut(s) 359, 627, 1239, 1488, 1494, 1830, 2161, 2393
BsoBI CYCGRG 1 cut(s) 1889
Bsp119I TTCGAA 3 cut(s) 300, 962, 1506
Bsp1286I GDGCHC 2 cut(s) 636, 907
Bsp143I GATC 9 cut(s) 134, 697, 763, 984, 1220, 1375, 1630, 1885, 2092
BspACI CCGC 3 cut(s) 933, 1537, 1543
BspANI GGCC 8 cut(s) 359, 627, 1239, 1488, 1494, 1830, 2161, 2393
BspCNI CTCAG 6 cut(s) 61, 562, 1576, 2097, 2164, 2370
BspLI GGNNCC 3 cut(s) 232, 1441, 1621
BspMAI CTGCAG 1 cut(s) 2128
BspMI ACCTGC 1 cut(s) 1984
BspPI GGATC 7 cut(s) 142, 692, 771, 1228, 1370, 1880, 2087
BspT104I TTCGAA 3 cut(s) 300, 962, 1506
BspT107I GGYRCC 2 cut(s) 230, 1439
BsrBI CCGCTC 1 cut(s) 935
BsrFI RCCGGY 1 cut(s) 314
BsrI ACTGG 6 cut(s) 382, 629, 674, 844, 999, 1708
BssAI RCCGGY 1 cut(s) 314
BssECI CCNNGG 3 cut(s) 804, 1324, 1489
BssMI GATC 9 cut(s) 134, 697, 763, 984, 1220, 1375, 1630, 1885, 2092
BssNI GRCGYC 1 cut(s) 651
BssT1I CCWWGG 2 cut(s) 1324, 1489
Bst4CI ACNGT 5 cut(s) 584, 1571, 1751, 1858, 2314
Bst6I CTCTTC 2 cut(s) 1179, 2052
BstACI GRCGYC 1 cut(s) 651
BstBAI YACGTR 1 cut(s) 750
BstBI TTCGAA 3 cut(s) 300, 962, 1506
BstC8I GCNNGC 1 cut(s) 335
BstDEI CTNAG 7 cut(s) 48, 570, 1584, 2014, 2105, 2172, 2378
BstEII GGTNACC 1 cut(s) 1877
BstF5I GGATG 3 cut(s) 74, 1654, 1743
BstKTI GATC 9 cut(s) 137, 700, 766, 987, 1223, 1378, 1633, 1888, 2095
BstMAI GTCTC 6 cut(s) 212, 257, 1270, 1558, 2101, 2114
BstMBI GATC 9 cut(s) 134, 697, 763, 984, 1220, 1375, 1630, 1885, 2092
BstMWI GCNNNNNNNGC 4 cut(s) 1465, 1474, 1802, 2264
BstPI GGTNACC 1 cut(s) 1877
BstSCI CCNGG 1 cut(s) 804
BstSFI CTRYAG 2 cut(s) 942, 2124
BstSLI GKGCMC 1 cut(s) 907
BstSNI TACGTA 1 cut(s) 750
BstV1I GCAGC 2 cut(s) 1742, 1921
BstV2I GAAGAC 2 cut(s) 535, 1978
BstX2I RGATCY 1 cut(s) 984
BstXI CCANNNNNNTGG 1 cut(s) 1325
BstYI RGATCY 1 cut(s) 984
BsuRI GGCC 8 cut(s) 359, 627, 1239, 1488, 1494, 1830, 2161, 2393
BtsCI GGATG 3 cut(s) 74, 1654, 1743
BtsIMutI CAGTG 3 cut(s) 306, 636, 2102
BveI ACCTGC 1 cut(s) 1984
Cac8I GCNNGC 1 cut(s) 335
CaiI CAGNNNCTG 2 cut(s) 1703, 1912
Cfr10I RCCGGY 1 cut(s) 314
Cfr13I GGNCC 5 cut(s) 151, 626, 1620, 1829, 2160
Csp6I GTAC 7 cut(s) 318, 329, 474, 751, 892, 1894, 1933
CspAI ACCGGT 1 cut(s) 314
CviAII CATG 6 cut(s) 861, 1264, 1609, 1847, 1897, 2237
CviQI GTAC 7 cut(s) 318, 329, 474, 751, 892, 1894, 1933
DdeI CTNAG 7 cut(s) 48, 570, 1584, 2014, 2105, 2172, 2378
DpnI GATC 9 cut(s) 136, 699, 765, 986, 1222, 1377, 1632, 1887, 2094
DpnII GATC 9 cut(s) 134, 697, 763, 984, 1220, 1375, 1630, 1885, 2092
DraI TTTAAA 1 cut(s) 487
DrdI GACNNNNNNGTC 1 cut(s) 1921
DseDI GACNNNNNNGTC 1 cut(s) 1921
Eam1104I CTCTTC 2 cut(s) 1179, 2052
EarI CTCTTC 2 cut(s) 1179, 2052
EciI GGCGGA 1 cut(s) 1526
Eco105I TACGTA 1 cut(s) 750
Eco130I CCWWGG 2 cut(s) 1324, 1489
Eco147I AGGCCT 2 cut(s) 1239, 1494
Eco32I GATATC 2 cut(s) 246, 1338
Eco47I GGWCC 2 cut(s) 151, 1620
Eco57I CTGAAG 1 cut(s) 50
Eco88I CYCGRG 1 cut(s) 1889
Eco91I GGTNACC 1 cut(s) 1877
EcoO109I RGGNCCY 1 cut(s) 1620
EcoO65I GGTNACC 1 cut(s) 1877
EcoRI GAATTC 2 cut(s) 452, 1502
EcoRV GATATC 2 cut(s) 246, 1338
EcoT14I CCWWGG 2 cut(s) 1324, 1489
ErhI CCWWGG 2 cut(s) 1324, 1489
FaeI CATG 6 cut(s) 864, 1267, 1612, 1850, 1900, 2240
FalI AAGNNNNNCTT 6 cut(s) 440, 472, 531, 563, 971, 1003
FaqI GGGAC 2 cut(s) 1633, 2348
FatI CATG 6 cut(s) 860, 1263, 1608, 1846, 1896, 2236
Fnu4HI GCNGC 2 cut(s) 1731, 1910
FokI GGATG 3 cut(s) 61, 1661, 1730
Fsp4HI GCNGC 2 cut(s) 1731, 1910
FspBI CTAG 5 cut(s) 429, 888, 1595, 2054, 2097
GluI GCNGC 2 cut(s) 1731, 1910
GsaI CCCAGC 1 cut(s) 739
HaeIII GGCC 8 cut(s) 359, 627, 1239, 1488, 1494, 1830, 2161, 2393
HapII CCGG 3 cut(s) 315, 806, 1354
Hin1I GRCGYC 1 cut(s) 651
Hin1II CATG 6 cut(s) 864, 1267, 1612, 1850, 1900, 2240
HincII GTYRAC 2 cut(s) 281, 2317
HindII GTYRAC 2 cut(s) 281, 2317
HindIII AAGCTT 1 cut(s) 2204
HpaI GTTAAC 1 cut(s) 2317
HpaII CCGG 3 cut(s) 315, 806, 1354
HphI GGTGA 3 cut(s) 556, 630, 1060
Hpy188III TCNNGA 5 cut(s) 149, 1499, 1835, 1889, 1955
HpyAV CCTTC 9 cut(s) 74, 89, 205, 564, 1189, 1505, 1571, 2039, 2074
HpyCH4III ACNGT 5 cut(s) 584, 1571, 1751, 1858, 2314
HpyCH4IV ACGT 3 cut(s) 651, 749, 2070
HpyF10VI GCNNNNNNNGC 4 cut(s) 1465, 1474, 1802, 2264
HpyF3I CTNAG 7 cut(s) 48, 570, 1584, 2014, 2105, 2172, 2378
HpySE526I ACGT 3 cut(s) 651, 749, 2070
Hsp92I GRCGYC 1 cut(s) 651
Hsp92II CATG 6 cut(s) 864, 1267, 1612, 1850, 1900, 2240
KspAI GTTAAC 1 cut(s) 2317
Kzo9I GATC 9 cut(s) 134, 697, 763, 984, 1220, 1375, 1630, 1885, 2092
Lsp1109I GCAGC 2 cut(s) 1742, 1921
LweI GCATC 3 cut(s) 130, 794, 1749
MaeI CTAG 5 cut(s) 429, 888, 1595, 2054, 2097
MaeII ACGT 3 cut(s) 651, 749, 2070
MaeIII GTNAC 5 cut(s) 652, 914, 1565, 1877, 1902
MalI GATC 9 cut(s) 136, 699, 765, 986, 1222, 1377, 1632, 1887, 2094
MbiI CCGCTC 1 cut(s) 935
MboI GATC 9 cut(s) 134, 697, 763, 984, 1220, 1375, 1630, 1885, 2092
MfeI CAATTG 1 cut(s) 127
MflI RGATCY 1 cut(s) 984
MhlI GDGCHC 2 cut(s) 636, 907
MlyI GAGTC 4 cut(s) 428, 473, 1196, 2357
MmeI TCCRAC 4 cut(s) 143, 601, 876, 1198
MroXI GAANNNNTTC 2 cut(s) 422, 456
MseI TTAA 7 cut(s) 387, 468, 486, 741, 1074, 1559, 2316
MslI CAYNNNNRTG 6 cut(s) 912, 1445, 1638, 1725, 1752, 1859
MspA1I CMGCKG 1 cut(s) 1912
MspI CCGG 3 cut(s) 315, 806, 1354
MspR9I CCNGG 1 cut(s) 806
MunI CAATTG 1 cut(s) 127
Mva1269I GAATGC 2 cut(s) 889, 1057
MwoI GCNNNNNNNGC 4 cut(s) 1465, 1474, 1802, 2264
NciI CCSGG 1 cut(s) 806
NdeII GATC 9 cut(s) 134, 697, 763, 984, 1220, 1375, 1630, 1885, 2092
NlaIII CATG 6 cut(s) 864, 1267, 1612, 1850, 1900, 2240
NlaIV GGNNCC 3 cut(s) 232, 1441, 1621
NmuCI GTSAC 3 cut(s) 652, 914, 1902
NspV TTCGAA 3 cut(s) 300, 962, 1506
OliI CACNNNNGTG 3 cut(s) 912, 1445, 1859
PceI AGGCCT 2 cut(s) 1239, 1494
PctI GAATGC 2 cut(s) 889, 1057
PdmI GAANNNNTTC 2 cut(s) 422, 456
PfeI GAWTC 9 cut(s) 191, 398, 998, 1061, 1260, 1643, 2147, 2306, 2382
PinAI ACCGGT 1 cut(s) 314
PkrI GCNGC 2 cut(s) 1732, 1911
PleI GAGTC 4 cut(s) 428, 473, 1195, 2356
PpsI GAGTC 4 cut(s) 428, 473, 1195, 2356
Ppu21I YACGTR 1 cut(s) 750
PpuMI RGGWCCY 1 cut(s) 1620
PshBI ATTAAT 1 cut(s) 468
PsiI TTATAA 2 cut(s) 1176, 1419
Psp5II RGGWCCY 1 cut(s) 1620
PspEI GGTNACC 1 cut(s) 1877
PspFI CCCAGC 1 cut(s) 735
PspN4I GGNNCC 3 cut(s) 232, 1441, 1621
PspPI GGNCC 5 cut(s) 151, 626, 1620, 1829, 2160
PspPPI RGGWCCY 1 cut(s) 1620
PstI CTGCAG 1 cut(s) 2128
PstNI CAGNNNCTG 2 cut(s) 1703, 1912
PsuI RGATCY 1 cut(s) 984
PvuII CAGCTG 1 cut(s) 1912
RsaI GTAC 7 cut(s) 319, 330, 475, 752, 893, 1895, 1934
RsaNI GTAC 7 cut(s) 318, 329, 474, 751, 892, 1894, 1933
RseI CAYNNNNRTG 6 cut(s) 912, 1445, 1638, 1725, 1752, 1859
SaqAI TTAA 7 cut(s) 387, 468, 486, 741, 1074, 1559, 2316
SatI GCNGC 2 cut(s) 1731, 1910
Sau3AI GATC 9 cut(s) 134, 697, 763, 984, 1220, 1375, 1630, 1885, 2092
Sau96I GGNCC 5 cut(s) 151, 626, 1620, 1829, 2160
SchI GAGTC 4 cut(s) 428, 473, 1196, 2357
ScrFI CCNGG 1 cut(s) 806
SduI GDGCHC 2 cut(s) 636, 907
SfaNI GCATC 3 cut(s) 130, 794, 1749
SfcI CTRYAG 2 cut(s) 942, 2124
SfuI TTCGAA 3 cut(s) 300, 962, 1506
SinI GGWCC 2 cut(s) 151, 1620
SmiMI CAYNNNNRTG 6 cut(s) 912, 1445, 1638, 1725, 1752, 1859
SmlI CTYRAG 3 cut(s) 361, 1624, 1955
SmoI CTYRAG 3 cut(s) 361, 1624, 1955
SnaBI TACGTA 1 cut(s) 750
SpeI ACTAGT 1 cut(s) 1594
SseBI AGGCCT 2 cut(s) 1239, 1494
SsiI CCGC 3 cut(s) 933, 1537, 1543
SspI AATATT 2 cut(s) 1143, 2284
SspMI CTAG 5 cut(s) 429, 888, 1595, 2054, 2097
StuI AGGCCT 2 cut(s) 1239, 1494
StyD4I CCNGG 1 cut(s) 804
StyI CCWWGG 2 cut(s) 1324, 1489
TaaI ACNGT 5 cut(s) 584, 1571, 1751, 1858, 2314
TaiI ACGT 3 cut(s) 654, 752, 2073
TaqI TCGA 5 cut(s) 300, 962, 1506, 1820, 2309
TatI WGTACW 2 cut(s) 1893, 1932
TfiI GAWTC 9 cut(s) 191, 398, 998, 1061, 1260, 1643, 2147, 2306, 2382
Tru1I TTAA 7 cut(s) 387, 468, 486, 741, 1074, 1559, 2316
Tru9I TTAA 7 cut(s) 387, 468, 486, 741, 1074, 1559, 2316
TscAI CASTG 3 cut(s) 313, 636, 2109
TseFI GTSAC 3 cut(s) 652, 914, 1902
TseI GCWGC 2 cut(s) 1730, 1909
Tsp45I GTSAC 3 cut(s) 652, 914, 1902
TspGWI ACGGA 2 cut(s) 890, 965
TspRI CASTG 3 cut(s) 313, 636, 2109
VneI GTGCAC 1 cut(s) 903
VpaK11BI GGWCC 2 cut(s) 151, 1620
VspI ATTAAT 1 cut(s) 468
XapI RAATTY 7 cut(s) 166, 381, 452, 559, 1502, 1683, 2364
XmnI GAANNNNTTC 2 cut(s) 422, 456
XspI CTAG 5 cut(s) 429, 888, 1595, 2054, 2097
ZraI GACGTC 1 cut(s) 652
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.