Rh1AG061400

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000413
Physical Location & Seq
Forward (+)
10112753 .. 10117972
5220 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG061400.1

Sequence Viewer

Length: 2427 bp
ATGGAGCATCTTCGTATCCCATTACTCTCTCTGCTTGTTTTTCTCCTCAACCTCTCATCCCTTCACTTTCTGTCTCTAACTGATGATTATTTCATCAACTGTGGTTCACATGATAATGTGAGCCTCACTCCTGGCCAGAATTTCTCTGGGGAATCGAAGCCTGCAGGTTACTCTTTCTCCAAAAGCAAGGCTGTCAAAGACATCAACCAGTTGCCAGATATATCACCTCTATATAAGACAGCAAGAAGTTTCAATAAACCATTCTACTACCAGTTCAGCATCACTGAAGATGGTACTTATCTGGTACGCTTACATTTCTCAGCTTTCTCCTCCTCCTCCTCCTCAAATAATCTCTCCACGGCTGTTTTTGGTGTTTTGGATTCTAAGAATTTCACACTGTTGAACAATTTCACCGCCAAGAACACTACCTACTCCCCTGTGATAAAGGAATTCTTTCTCCGAATTGATATTACCGACTCATTTAGACTATATTTTACTCCTCAACCATCATCTTTTGCATTTGTAAATGCCATAGAATTATTCCTTTCCCCTGTAGATTTCATCCCTGAGAACTATACCAGTAATCTCCCTTTACATACAATTTACAGACTCAACGTTGGAGGCTCACCAGTAAATGACACAATAGGGAGAAACTGGGAAACAGATGATAGTCATATTTCTGATCAAAACTCTGCACAGAAAGCCCCTCCTAAAAGTACACTCAATTTAAATTACTTTGGAGAAATTGATGGTTTCGTTGTATCTAATGAGTCTGTAGCCCCACCTTTGGTTTACCAGACTGCTAGAGAGATTATGAATGTCACTAGTAAAATAACCTGGTTTTTTAGAGTGAGTAGTAAAGCTAGACACATTGTCCGGGCTCACTTCTGTTACATTATTGTTCAGCCTGGTAACATTATATTTAACTTGTATGCAAATGGGGACTTCCGCAAGCAGATAAGCAACATTTCTCCGGCTGTTCCCTTCTACTATGACTTTGTGGTGAATTATAGTGAGTCTGAACTCTTTAATATCAGCATAAGACCTAACAATGGTGCTTTTGAGCAAAATGCATTTCTAAATGGTCTGGAAATATTGGAGATAGCGGAGGGATTAGCTCCAATTCCTAATGTGAAAGAGTCCAAGAAGAATGTTGTGGCTCCTGTGCTTGGTTCAGTTCTTGGAGGCCTGTTGCTCATCTGCGTTTTAATAGTTGGATTTGTGTTCGGTTTCAGACACAGAAAGGCAGAAAAGCGTGTGGAGACTTCAGTTTGGTCACCAATGCCTGCAAATGGAGGAGGGAGTTCTCACAGCTCCGCTCTCAATCTAAATTATCTTGGGTTGAAGATATCTTTCAATGAAATTCAGTCTGCAACGAACAACTTTGACACAAAGTTGGTGATAGGTAAGGGTGGCTTTGGGAATGTTTATAGAGGCACTCTTTTGAATGGCACAAAAGTGGCTGTGAAGCGAGCTTATAAGCGAGATGAGCATGGGTCAGGATCAGGCCAAGGCCTCCTAGAATTCGAAACAGAAATAATACTGTTATCGAAAATCCGCCACCGCCATCTTGTCTCCTTAATTGGTTACTGTAATGAAAGGTCTGAAATGATACTAGTGTATGAGTTCATGGAAAAAGGGACGTTGAGAGACCATTTGTATGATTCGGACATGCCTCGCTTGTTGTGGAAGCAAAGACTTGAAATTTGTACTGGAGCAGCAAGGGGTCTTCATTATCTCCACACAGGTGCAGCTGGGAGAATCATTCACCGAGATGTCAAGTCCACCAACATATTGCTTGATGAAAACCATGTTGCCAAAGTTGCTGACTTTGGCCTTTCGAGATCTGGAGCTCTCGATGAAACGCATGTCAGCACTAATGTTAAAGGCACTTTTGGTTACCTTGATCCTGAGTACATGATGTCTGAACAATTGACAGAAAAATCTGATGTTTACTCATTTGGTGTAGTTCTTCTTGAGGTGCTATGTGGAAGACCTGCTATTGATCCAACGCTTCCAAGAGAGCAAATGAACTTGGCTGAATGGGGAATGCTTTGCAAGAAAAAAGGGTTGCTTGAAGAGATTGTTGATTCTTCATTGAAAAATCAGATTGATCCTAGCTCGCTGAGAACGTTTGTTGAGACGGCTGAGAAGTGTTTGCAAGAAGATGCTTCTGATAGGCCAACAATGGCCGATGTGCTGTGGGATTTGGAATATGCATTGCAGCTTCAGAAAACAACAAAGCTTAAAGAGGCTCATGAGGACAGCACCACCATTGATGCTTCATCAGCAGCATTCGGTTTGCCAATTGTTCAGCGTTTTCCTTCACTTGGTTCGACAACAAATGGAGATGATATGAGGGACAACGACTTGGACACAACAGAAAGCAAAATTTTCTCCCAATTGAAAATTGGTGATGCCAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

808

Amino Acids

90.14

Weight (kDa)

6.03

Isoelectric Point (pI)

39.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 30 - 111 7.3e-07 Malectin domain
Malectin_like PF12819 32 - 367 2.2e-18 Malectin-like domain
Pkinase PF00069 465 - 734 4.4e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 466 - 735 1.4e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000413)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23200
fragaria_vesca FvH4_1g16860 FvH4_1g16861
malus_domestica MD02G1018900.v1.1 MD15G1289500.v1.1 MD15G1289600.v1.1 MD15G1289700.v1.1
prunus_persica Prupe.6G227800_v2.0.a1 Prupe.6G228000_v2.0.a1 Prupe.6G228100_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228300_v2.0.a1
pyrus_communis pycom02g01680 pycom02g01690 pycom15g25310 pycom15g25330 pycom15g25340
rosa_chinensis RchiOBHm_Chr1g0324321 RchiOBHm_Chr1g0324331 RchiOBHm_Chr1g0324341 RchiOBHm_Chr1g0324401 RchiOBHm_Chr1g0324441 RchiOBHm_Chr2g0106751 RchiOBHm_Chr2g0106761 RchiOBHm_Chr2g0106771 RchiOBHm_Chr2g0106781 RchiOBHm_Chr2g0106801 RchiOBHm_Chr2g0106811 RchiOBHm_Chr2g0106821
rosa_laevigata RLG00000017539 RLG00000017540 RLG00000017541 RLG00000030200 RLG00000030201
rosa_multiflora Rmu_sc0000751.1_g000001 Rmu_sc0000751.1_g000002 Rmu_sc0000751.1_g000003 Rmu_sc0000751.1_g000005 Rmu_sc0000751.1_g000007 Rmu_sc0000751.1_g000008 Rmu_sc0000751.1_g000018 Rmu_sc0000751.1_g000019 Rmu_sc0000751.1_g000026 Rmu_sc0000751.1_g000027 Rmu_sc0000751.1_g000028 Rmu_sc0000751.1_g000029 Rmu_sc0003410.1_g000012 Rmu_sc0004000.1_g000023 Rmu_sc0004000.1_g000024 Rmu_sc0004082.1_g000015 Rmu_sc0004082.1_g000017 Rmu_sc0026507.1_g000001 Rmu_sc0031196.1_g000001 Rmu_sc0039591.1_g000001
rosa_roxburghii Rroxscaffold_159G00432710 Rroxscaffold_159G00432780 Rroxscaffold_159G00432840 Rroxscaffold_159G00433010 Rroxscaffold_2G00098070 Rroxscaffold_2G00136770 Rroxscaffold_4G00325540 Rroxscaffold_4G00325630 Rroxscaffold_4G00325680
rosa_rugosa Rorug01G0045700 Rorug02G0138500 Rorug02G0138600 Rorug02G0138700 Rorug02G0138800 Rorug02G0138900
rosa_samantha Rh1AG061400 Rh1BG052300 Rh1CG063400 Rh1CG063700 Rh1DG067800 Rh2AG189400 Rh2AG189800 Rh2AG190000 Rh2AG190100 Rh2BG201100 Rh2BG201300 Rh2CG194500 Rh2CG194600 Rh2CG194700 Rh2DG195700 Rh2DG195900 Rh2DG196300 Rh2DG196400 Rh2DG196500 Rh2DG196600
rosa_wichuraiana Rw1G004230 Rw1G005210 Rw2G014900 Rw2G014910 Rw2G014930 Rw2G014940 Rw2G014950 Rw2G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1479
Acc36I ACCTGC 2 cut(s) 155, 2005
AccBSI CCGCTC 1 cut(s) 1319
AciI CCGC 6 cut(s) 414, 949, 1106, 1317, 1558, 1564
AclI AACGTT 2 cut(s) 615, 2132
AclWI GGATC 4 cut(s) 1510, 1901, 2000, 2108
AcoI YGGCCR 2 cut(s) 133, 2190
AcsI RAATTY 7 cut(s) 139, 388, 449, 1362, 1523, 1704, 2391
AcuI CTGAAG 3 cut(s) 306, 1251, 2213
AfaI GTAC 5 cut(s) 295, 306, 718, 1711, 1916
AfiI CCNNNNNNNGG 5 cut(s) 787, 1052, 1169, 1292, 2330
AgsI TTSAA 9 cut(s) 253, 403, 1345, 1357, 1447, 1703, 2078, 2101, 2407
AhdI GACNNNNNGTC 1 cut(s) 872
AhlI ACTAGT 2 cut(s) 824, 1615
AjnI CCWGG 3 cut(s) 130, 836, 907
AleI CACNNNNGTG 2 cut(s) 1457, 1746
Alw21I GWGCWC 1 cut(s) 1855
Alw26I GTCTC 5 cut(s) 78, 1256, 1579, 1644, 2135
AlwI GGATC 4 cut(s) 1510, 1901, 2000, 2108
AoxI GGCC 7 cut(s) 133, 1186, 1507, 1513, 1834, 2180, 2190
ApeKI GCWGC 4 cut(s) 1718, 1751, 2224, 2291
ApoI RAATTY 7 cut(s) 139, 388, 449, 1362, 1523, 1704, 2391
ArsI GACNNNNNNTTYG 2 cut(s) 1689, 1721
Asp700I GAANNNNTTC 2 cut(s) 407, 453
AsuC2I CCSGG 1 cut(s) 878
AsuHPI GGTGA 8 cut(s) 216, 403, 618, 1015, 1269, 1411, 1760, 2426
AsuII TTCGAA 1 cut(s) 1527
BaeI ACNNNNGTAYC 2 cut(s) 1604, 1637
BalI TGGCCA 1 cut(s) 135
BanII GRGCYC 2 cut(s) 883, 1855
BbsI GAAGAC 2 cut(s) 1721, 1999
Bbv12I GWGCWC 1 cut(s) 1855
BbvI GCAGC 4 cut(s) 1730, 1763, 2236, 2303
BccI CCATC 4 cut(s) 284, 514, 743, 1575
BceAI ACGGC 2 cut(s) 375, 2160
BciT130I CCWGG 3 cut(s) 132, 838, 909
BciVI GTATCC 1 cut(s) 26
BclI TGATCA 1 cut(s) 682
BcnI CCSGG 1 cut(s) 878
BcoDI GTCTC 5 cut(s) 78, 1256, 1579, 1644, 2135
BcuI ACTAGT 2 cut(s) 824, 1615
BfaI CTAG 6 cut(s) 804, 825, 864, 1520, 1616, 2118
BfmI CTRYAG 3 cut(s) 162, 552, 774
BfuAI ACCTGC 2 cut(s) 155, 2005
BfuI GTATCC 1 cut(s) 26
BglII AGATCT 1 cut(s) 1844
BisI GCNGC 4 cut(s) 1719, 1752, 2225, 2292
BlsI GCNGC 4 cut(s) 1720, 1753, 2226, 2293
Bme1390I CCNGG 4 cut(s) 132, 838, 878, 909
BmeRI GACNNNNNGTC 1 cut(s) 872
BmiI GGNNCC 1 cut(s) 1161
BmrFI CCNGG 4 cut(s) 132, 838, 878, 909
BmrI ACTGGG 1 cut(s) 664
BmsI GCATC 5 cut(s) 16, 288, 2158, 2269, 2407
BmuI ACTGGG 1 cut(s) 664
BpiI GAAGAC 2 cut(s) 1721, 1999
BplI GAGNNNNNCTC 2 cut(s) 112, 144
BpmI CTGGAG 2 cut(s) 1734, 1869
Bpu14I TTCGAA 1 cut(s) 1527
BpuEI CTTGAG 1 cut(s) 1997
BpuMI CCSGG 1 cut(s) 878
BsaI GGTCTC 1 cut(s) 1644
BsaJI CCNNGG 2 cut(s) 357, 1510
BsaXI ACNNNNNCTCC 2 cut(s) 161, 191
Bsc4I CCNNNNNNNGG 5 cut(s) 787, 1052, 1169, 1292, 2330
Bse1I ACTGG 6 cut(s) 208, 271, 579, 629, 659, 1717
Bse3DI GCAATG 1 cut(s) 2219
BseBI CCWGG 3 cut(s) 132, 838, 909
BseDI CCNNGG 2 cut(s) 357, 1510
BseGI GGATG 2 cut(s) 56, 561
BseLI CCNNNNNNNGG 5 cut(s) 787, 1052, 1169, 1292, 2330
BseMI GCAATG 1 cut(s) 2219
BseMII CTCAG 5 cut(s) 333, 558, 1902, 2117, 2139
BseNI ACTGG 6 cut(s) 208, 271, 579, 629, 659, 1717
BseRI GAGGAG 8 cut(s) 35, 319, 322, 325, 328, 331, 489, 1311
BseXI GCAGC 4 cut(s) 1730, 1763, 2236, 2303
BseYI CCCAGC 1 cut(s) 1754
BsgI GTGCAG 2 cut(s) 678, 1770
BshFI GGCC 7 cut(s) 135, 1188, 1509, 1515, 1836, 2182, 2192
BsiHKAI GWGCWC 1 cut(s) 1855
BsiSI CCGG 2 cut(s) 877, 974
BslFI GGGAC 3 cut(s) 956, 1654, 2375
BslI CCNNNNNNNGG 5 cut(s) 787, 1052, 1169, 1292, 2330
BsmAI GTCTC 5 cut(s) 78, 1256, 1579, 1644, 2135
BsmBI CGTCTC 1 cut(s) 2135
BsmFI GGGAC 3 cut(s) 956, 1654, 2375
BsmI GAATGC 2 cut(s) 2055, 2294
BsnI GGCC 7 cut(s) 135, 1188, 1509, 1515, 1836, 2182, 2192
Bso31I GGTCTC 1 cut(s) 1644
Bsp119I TTCGAA 1 cut(s) 1527
Bsp1286I GDGCHC 2 cut(s) 883, 1855
Bsp143I GATC 6 cut(s) 682, 1502, 1844, 1906, 2005, 2113
BspACI CCGC 6 cut(s) 414, 949, 1106, 1317, 1558, 1564
BspANI GGCC 7 cut(s) 135, 1188, 1509, 1515, 1836, 2182, 2192
BspCNI CTCAG 5 cut(s) 332, 559, 1903, 2118, 2140
BspHI TCATGA 1 cut(s) 2257
BspLI GGNNCC 1 cut(s) 1161
BspMAI CTGCAG 1 cut(s) 166
BspMI ACCTGC 2 cut(s) 155, 2005
BspPI GGATC 4 cut(s) 1510, 1901, 2000, 2108
BspT104I TTCGAA 1 cut(s) 1527
BspTNI GGTCTC 1 cut(s) 1644
BsrBI CCGCTC 1 cut(s) 1319
BsrDI GCAATG 1 cut(s) 2219
BsrI ACTGG 6 cut(s) 208, 271, 579, 629, 659, 1717
BssECI CCNNGG 2 cut(s) 357, 1510
BssMI GATC 6 cut(s) 682, 1502, 1844, 1906, 2005, 2113
BssT1I CCWWGG 1 cut(s) 1510
Bst2UI CCWGG 3 cut(s) 132, 838, 909
Bst4CI ACNGT 4 cut(s) 101, 399, 1545, 1592
Bst6I CTCTTC 1 cut(s) 2073
BstBI TTCGAA 1 cut(s) 1527
BstC8I GCNNGC 5 cut(s) 162, 953, 1287, 1473, 2123
BstDEI CTNAG 6 cut(s) 319, 384, 567, 1911, 2126, 2148
BstDSI CCRYGG 1 cut(s) 357
BstEII GGTNACC 2 cut(s) 1275, 1898
BstF5I GGATG 2 cut(s) 56, 561
BstKTI GATC 6 cut(s) 685, 1505, 1847, 1909, 2008, 2116
BstMAI GTCTC 5 cut(s) 78, 1256, 1579, 1644, 2135
BstMBI GATC 6 cut(s) 682, 1502, 1844, 1906, 2005, 2113
BstMWI GCNNNNNNNGC 4 cut(s) 701, 1489, 1823, 2288
BstNI CCWGG 3 cut(s) 132, 838, 909
BstNSI RCATGY 2 cut(s) 1675, 1871
BstPI GGTNACC 2 cut(s) 1275, 1898
BstSCI CCNGG 4 cut(s) 130, 836, 876, 907
BstSFI CTRYAG 3 cut(s) 162, 552, 774
BstV1I GCAGC 4 cut(s) 1730, 1763, 2236, 2303
BstV2I GAAGAC 2 cut(s) 1721, 1999
BstX2I RGATCY 1 cut(s) 1844
BstYI RGATCY 1 cut(s) 1844
BsuI GTATCC 1 cut(s) 26
BsuRI GGCC 7 cut(s) 135, 1188, 1509, 1515, 1836, 2182, 2192
BtgI CCRYGG 1 cut(s) 357
BtsCI GGATG 2 cut(s) 56, 561
BtsIMutI CAGTG 2 cut(s) 282, 395
BveI ACCTGC 2 cut(s) 155, 2005
Cac8I GCNNGC 5 cut(s) 162, 953, 1287, 1473, 2123
CciI TCATGA 1 cut(s) 2257
CsiI ACCWGGT 1 cut(s) 836
Csp6I GTAC 5 cut(s) 294, 305, 717, 1710, 1915
CviAII CATG 8 cut(s) 110, 1493, 1630, 1672, 1811, 1868, 1918, 2258
CviQI GTAC 5 cut(s) 294, 305, 717, 1710, 1915
DdeI CTNAG 6 cut(s) 319, 384, 567, 1911, 2126, 2148
DpnI GATC 6 cut(s) 684, 1504, 1846, 1908, 2007, 2115
DpnII GATC 6 cut(s) 682, 1502, 1844, 1906, 2005, 2113
DraI TTTAAA 1 cut(s) 729
DriI GACNNNNNGTC 1 cut(s) 872
EaeI YGGCCR 2 cut(s) 133, 2190
Eam1104I CTCTTC 1 cut(s) 2073
Eam1105I GACNNNNNGTC 1 cut(s) 872
EarI CTCTTC 1 cut(s) 2073
EciI GGCGGA 1 cut(s) 1547
Ecl136II GAGCTC 1 cut(s) 1853
Eco130I CCWWGG 1 cut(s) 1510
Eco147I AGGCCT 2 cut(s) 1188, 1515
Eco24I GRGCYC 2 cut(s) 883, 1855
Eco31I GGTCTC 1 cut(s) 1644
Eco32I GATATC 1 cut(s) 1350
Eco53kI GAGCTC 1 cut(s) 1853
Eco57I CTGAAG 3 cut(s) 306, 1251, 2213
Eco91I GGTNACC 2 cut(s) 1275, 1898
EcoICRI GAGCTC 1 cut(s) 1853
EcoO65I GGTNACC 2 cut(s) 1275, 1898
EcoRI GAATTC 2 cut(s) 449, 1523
EcoRII CCWGG 3 cut(s) 130, 836, 907
EcoRV GATATC 1 cut(s) 1350
EcoT14I CCWWGG 1 cut(s) 1510
EcoT22I ATGCAT 2 cut(s) 1075, 2221
EcoT38I GRGCYC 2 cut(s) 883, 1855
ErhI CCWWGG 1 cut(s) 1510
Esp3I CGTCTC 1 cut(s) 2135
FaeI CATG 8 cut(s) 113, 1496, 1633, 1675, 1814, 1871, 1921, 2261
FalI AAGNNNNNCTT 6 cut(s) 437, 469, 1400, 1432, 2058, 2090
FaqI GGGAC 3 cut(s) 956, 1654, 2375
FatI CATG 8 cut(s) 109, 1492, 1629, 1671, 1810, 1867, 1917, 2257
FbaI TGATCA 1 cut(s) 682
Fnu4HI GCNGC 4 cut(s) 1719, 1752, 2225, 2292
FokI GGATG 2 cut(s) 43, 548
FriOI GRGCYC 2 cut(s) 883, 1855
Fsp4HI GCNGC 4 cut(s) 1719, 1752, 2225, 2292
FspBI CTAG 6 cut(s) 804, 825, 864, 1520, 1616, 2118
GluI GCNGC 4 cut(s) 1719, 1752, 2225, 2292
GsaI CCCAGC 1 cut(s) 1758
GsuI CTGGAG 2 cut(s) 1734, 1869
HaeIII GGCC 7 cut(s) 135, 1188, 1509, 1515, 1836, 2182, 2192
HapII CCGG 2 cut(s) 877, 974
Hin1II CATG 8 cut(s) 113, 1496, 1633, 1675, 1814, 1871, 1921, 2261
HindIII AAGCTT 1 cut(s) 2243
HpaII CCGG 2 cut(s) 877, 974
HphI GGTGA 8 cut(s) 216, 403, 618, 1015, 1269, 1411, 1760, 2426
Hpy166II GTNNAC 5 cut(s) 107, 719, 793, 1785, 1954
Hpy188III TCNNGA 8 cut(s) 1088, 1500, 1842, 1848, 1856, 1910, 1976, 2258
Hpy8I GTNNAC 5 cut(s) 107, 719, 793, 1785, 1954
HpyAV CCTTC 3 cut(s) 71, 994, 2334
HpyCH4III ACNGT 4 cut(s) 101, 399, 1545, 1592
HpyCH4IV ACGT 3 cut(s) 615, 1643, 2132
HpyF10VI GCNNNNNNNGC 4 cut(s) 701, 1489, 1823, 2288
HpyF3I CTNAG 6 cut(s) 319, 384, 567, 1911, 2126, 2148
HpySE526I ACGT 3 cut(s) 615, 1643, 2132
Hsp92II CATG 8 cut(s) 113, 1496, 1633, 1675, 1814, 1871, 1921, 2261
Ksp22I TGATCA 1 cut(s) 682
Kzo9I GATC 6 cut(s) 682, 1502, 1844, 1906, 2005, 2113
LmnI GCTCC 6 cut(s) 4, 1123, 1165, 1319, 1715, 1850
Lsp1109I GCAGC 4 cut(s) 1730, 1763, 2236, 2303
LweI GCATC 5 cut(s) 16, 288, 2158, 2269, 2407
MabI ACCWGGT 1 cut(s) 836
MaeI CTAG 6 cut(s) 804, 825, 864, 1520, 1616, 2118
MaeII ACGT 3 cut(s) 615, 1643, 2132
MaeIII GTNAC 7 cut(s) 167, 820, 890, 911, 1275, 1586, 1898
MalI GATC 6 cut(s) 684, 1504, 1846, 1908, 2007, 2115
MbiI CCGCTC 1 cut(s) 1319
MboI GATC 6 cut(s) 682, 1502, 1844, 1906, 2005, 2113
MboII GAAGA 9 cut(s) 299, 1159, 1357, 1721, 1964, 2004, 2085, 2090, 2177
MfeI CAATTG 3 cut(s) 1931, 2307, 2402
MflI RGATCY 1 cut(s) 1844
MhlI GDGCHC 2 cut(s) 883, 1855
MlsI TGGCCA 1 cut(s) 135
MluNI TGGCCA 1 cut(s) 135
MlyI GAGTC 5 cut(s) 470, 603, 779, 1025, 1148
MmeI TCCRAC 3 cut(s) 598, 1195, 2033
Mox20I TGGCCA 1 cut(s) 135
Mph1103I ATGCAT 2 cut(s) 1075, 2221
MroXI GAANNNNTTC 2 cut(s) 407, 453
MscI TGGCCA 1 cut(s) 135
MseI TTAA 7 cut(s) 728, 924, 1029, 1208, 1580, 1884, 2247
MslI CAYNNNNRTG 5 cut(s) 114, 1457, 1659, 1746, 1773
Msp20I TGGCCA 1 cut(s) 135
MspA1I CMGCKG 1 cut(s) 1754
MspI CCGG 2 cut(s) 877, 974
MspR9I CCNGG 4 cut(s) 132, 838, 878, 909
MunI CAATTG 3 cut(s) 1931, 2307, 2402
Mva1269I GAATGC 2 cut(s) 2055, 2294
MvaI CCWGG 3 cut(s) 132, 838, 909
MwoI GCNNNNNNNGC 4 cut(s) 701, 1489, 1823, 2288
NciI CCSGG 1 cut(s) 878
NdeII GATC 6 cut(s) 682, 1502, 1844, 1906, 2005, 2113
NlaIII CATG 8 cut(s) 113, 1496, 1633, 1675, 1814, 1871, 1921, 2261
NlaIV GGNNCC 1 cut(s) 1161
NmuCI GTSAC 2 cut(s) 820, 1275
NsiI ATGCAT 2 cut(s) 1075, 2221
NspI RCATGY 2 cut(s) 1675, 1871
NspV TTCGAA 1 cut(s) 1527
OliI CACNNNNGTG 2 cut(s) 1457, 1746
PagI TCATGA 1 cut(s) 2257
PceI AGGCCT 2 cut(s) 1188, 1515
PcsI WCGNNNNNNNCGW 1 cut(s) 2129
PctI GAATGC 2 cut(s) 2055, 2294
PdmI GAANNNNTTC 2 cut(s) 407, 453
PfeI GAWTC 5 cut(s) 152, 380, 1664, 1761, 2090
PkrI GCNGC 4 cut(s) 1720, 1753, 2226, 2293
PleI GAGTC 5 cut(s) 470, 603, 778, 1024, 1147
PpsI GAGTC 5 cut(s) 470, 603, 778, 1024, 1147
PsiI TTATAA 1 cut(s) 1479
Psp124BI GAGCTC 1 cut(s) 1855
Psp1406I AACGTT 2 cut(s) 615, 2132
Psp6I CCWGG 3 cut(s) 130, 836, 907
PspEI GGTNACC 2 cut(s) 1275, 1898
PspFI CCCAGC 1 cut(s) 1754
PspGI CCWGG 3 cut(s) 130, 836, 907
PspN4I GGNNCC 1 cut(s) 1161
PsrI GAACNNNNNNTAC 2 cut(s) 413, 445
PstI CTGCAG 1 cut(s) 166
PsuI RGATCY 1 cut(s) 1844
PvuII CAGCTG 1 cut(s) 1754
RsaI GTAC 5 cut(s) 295, 306, 718, 1711, 1916
RsaNI GTAC 5 cut(s) 294, 305, 717, 1710, 1915
RseI CAYNNNNRTG 5 cut(s) 114, 1457, 1659, 1746, 1773
SacI GAGCTC 1 cut(s) 1855
SaqAI TTAA 7 cut(s) 728, 924, 1029, 1208, 1580, 1884, 2247
SatI GCNGC 4 cut(s) 1719, 1752, 2225, 2292
Sau3AI GATC 6 cut(s) 682, 1502, 1844, 1906, 2005, 2113
SbfI CCTGCAGG 1 cut(s) 166
SchI GAGTC 5 cut(s) 470, 603, 779, 1025, 1148
ScrFI CCNGG 4 cut(s) 132, 838, 878, 909
SdaI CCTGCAGG 1 cut(s) 166
SduI GDGCHC 2 cut(s) 883, 1855
SexAI ACCWGGT 1 cut(s) 836
SfaNI GCATC 5 cut(s) 16, 288, 2158, 2269, 2407
SfcI CTRYAG 3 cut(s) 162, 552, 774
SfuI TTCGAA 1 cut(s) 1527
SmiI ATTTAAAT 1 cut(s) 729
SmiMI CAYNNNNRTG 5 cut(s) 114, 1457, 1659, 1746, 1773
SmlI CTYRAG 1 cut(s) 1976
SmoI CTYRAG 1 cut(s) 1976
SpeI ACTAGT 2 cut(s) 824, 1615
Sse8387I CCTGCAGG 1 cut(s) 166
SseBI AGGCCT 2 cut(s) 1188, 1515
SsiI CCGC 6 cut(s) 414, 949, 1106, 1317, 1558, 1564
SspI AATATT 1 cut(s) 1095
SspMI CTAG 6 cut(s) 804, 825, 864, 1520, 1616, 2118
SstI GAGCTC 1 cut(s) 1855
StuI AGGCCT 2 cut(s) 1188, 1515
StyD4I CCNGG 4 cut(s) 130, 836, 876, 907
StyI CCWWGG 1 cut(s) 1510
SwaI ATTTAAAT 1 cut(s) 729
TaaI ACNGT 4 cut(s) 101, 399, 1545, 1592
TaiI ACGT 3 cut(s) 618, 1646, 2135
TaqI TCGA 6 cut(s) 155, 1527, 1550, 1841, 1857, 2336
TatI WGTACW 3 cut(s) 716, 1709, 1914
TfiI GAWTC 5 cut(s) 152, 380, 1664, 1761, 2090
Tru1I TTAA 7 cut(s) 728, 924, 1029, 1208, 1580, 1884, 2247
Tru9I TTAA 7 cut(s) 728, 924, 1029, 1208, 1580, 1884, 2247
TscAI CASTG 2 cut(s) 289, 402
TseFI GTSAC 2 cut(s) 820, 1275
TseI GCWGC 4 cut(s) 1718, 1751, 2224, 2291
Tsp45I GTSAC 2 cut(s) 820, 1275
TspRI CASTG 2 cut(s) 289, 402
XapI RAATTY 7 cut(s) 139, 388, 449, 1362, 1523, 1704, 2391
XceI RCATGY 2 cut(s) 1675, 1871
XcmI CCANNNNNNNNNTGG 2 cut(s) 143, 2408
XmnI GAANNNNTTC 2 cut(s) 407, 453
XspI CTAG 6 cut(s) 804, 825, 864, 1520, 1616, 2118
Zsp2I ATGCAT 2 cut(s) 1075, 2221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.