Rmu_sc0000751.1_g000001

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000751.1
OG0000413
Physical Location & Seq
Reverse (-)
787 .. 1671
885 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000751.1_g000001.1.cds

Sequence Viewer

Length: 885 bp
atgcaaatttcaagtctttgcttccaccgccatcttgtctccttaattggttactgtgatgaagggtctgagatgatactagtgtatgagttcatggaaaaagggaccttgagagatcatttgtatgaatcggatgtgcctcgcttgtcgtggaagcaaagacttgaaatttgcataggttcagcaactggacttgattatctccataaaggtgcagcagggggcatcatccaccgtgatgtgaagtccaccaacatattacttgatgagaaccttgttgctaaagtcgctgacttcgggctttcgagttctggccctcttgatgaaactcatgtcagcacggttgtgaaaggcactatcggttaccttgatcccgagtacatgatgtcacagcagttgacagagaagtctgatgtgtactcatttggtgtagttcttcttgaggttttatgtggaagacctgctattgatataacgcttccaagagagaaagtgaacttagctgaatgggttgtgctgtgcaagaaagaagggttgctagaagaggtcattgacgtttcattgaaggatcatattgatcctagctcactgagacattttattgagactgcagagaagtgtttgcaacacgattcttctgataggcccactatggctgaggtgctgtgggatttggactatacattgaagcttcatcaaactgcgaggcttggagaagcccatgaggacagcactaccagtgcttcatcagcttttttactaccaaatattcggcattttgcttcacttgattcgacagttaacagagctgatatgagggacgatgagatggagtccacagaaagcgaaattttctcccaactgagaatcggcgaggccagataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

294

Amino Acids

32.97

Weight (kDa)

4.89

Isoelectric Point (pI)

40.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000413)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23200
fragaria_vesca FvH4_1g16860 FvH4_1g16861
malus_domestica MD02G1018900.v1.1 MD15G1289500.v1.1 MD15G1289600.v1.1 MD15G1289700.v1.1
prunus_persica Prupe.6G227800_v2.0.a1 Prupe.6G228000_v2.0.a1 Prupe.6G228100_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228300_v2.0.a1
pyrus_communis pycom02g01680 pycom02g01690 pycom15g25310 pycom15g25330 pycom15g25340
rosa_chinensis RchiOBHm_Chr1g0324321 RchiOBHm_Chr1g0324331 RchiOBHm_Chr1g0324341 RchiOBHm_Chr1g0324401 RchiOBHm_Chr1g0324441 RchiOBHm_Chr2g0106751 RchiOBHm_Chr2g0106761 RchiOBHm_Chr2g0106771 RchiOBHm_Chr2g0106781 RchiOBHm_Chr2g0106801 RchiOBHm_Chr2g0106811 RchiOBHm_Chr2g0106821
rosa_laevigata RLG00000017539 RLG00000017540 RLG00000017541 RLG00000030200 RLG00000030201
rosa_multiflora Rmu_sc0000751.1_g000001 Rmu_sc0000751.1_g000002 Rmu_sc0000751.1_g000003 Rmu_sc0000751.1_g000005 Rmu_sc0000751.1_g000007 Rmu_sc0000751.1_g000008 Rmu_sc0000751.1_g000018 Rmu_sc0000751.1_g000019 Rmu_sc0000751.1_g000026 Rmu_sc0000751.1_g000027 Rmu_sc0000751.1_g000028 Rmu_sc0000751.1_g000029 Rmu_sc0003410.1_g000012 Rmu_sc0004000.1_g000023 Rmu_sc0004000.1_g000024 Rmu_sc0004082.1_g000015 Rmu_sc0004082.1_g000017 Rmu_sc0026507.1_g000001 Rmu_sc0031196.1_g000001 Rmu_sc0039591.1_g000001
rosa_roxburghii Rroxscaffold_159G00432710 Rroxscaffold_159G00432780 Rroxscaffold_159G00432840 Rroxscaffold_159G00433010 Rroxscaffold_2G00098070 Rroxscaffold_2G00136770 Rroxscaffold_4G00325540 Rroxscaffold_4G00325630 Rroxscaffold_4G00325680
rosa_rugosa Rorug01G0045700 Rorug02G0138500 Rorug02G0138600 Rorug02G0138700 Rorug02G0138800 Rorug02G0138900
rosa_samantha Rh1AG061400 Rh1BG052300 Rh1CG063400 Rh1CG063700 Rh1DG067800 Rh2AG189400 Rh2AG189800 Rh2AG190000 Rh2AG190100 Rh2BG201100 Rh2BG201300 Rh2CG194500 Rh2CG194600 Rh2CG194700 Rh2DG195700 Rh2DG195900 Rh2DG196300 Rh2DG196400 Rh2DG196500 Rh2DG196600
rosa_wichuraiana Rw1G004230 Rw1G005210 Rw2G014900 Rw2G014910 Rw2G014930 Rw2G014940 Rw2G014950 Rw2G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 406
Acc36I ACCTGC 1 cut(s) 469
AciI CCGC 1 cut(s) 28
AclWI GGATC 3 cut(s) 365, 572, 576
AcsI RAATTY 3 cut(s) 6, 168, 849
AfaI GTAC 2 cut(s) 380, 419
AgsI TTSAA 4 cut(s) 12, 167, 565, 688
AhlI ACTAGT 1 cut(s) 79
AleI CACNNNNGTG 1 cut(s) 344
AluBI AGCT 5 cut(s) 503, 585, 691, 752, 809
AluI AGCT 5 cut(s) 503, 585, 691, 752, 809
Alw26I GTCTC 3 cut(s) 43, 586, 599
AlwI GGATC 3 cut(s) 365, 572, 576
AlwNI CAGNNNCTG 1 cut(s) 188
Ama87I CYCGRG 1 cut(s) 374
AoxI GGCC 3 cut(s) 313, 644, 876
ApeKI GCWGC 1 cut(s) 215
ApoI RAATTY 3 cut(s) 6, 168, 849
ArsI GACNNNNNNTTYG 3 cut(s) 30, 153, 185
AspS9I GGNCC 3 cut(s) 105, 314, 645
AvaI CYCGRG 1 cut(s) 374
AvaII GGWCC 1 cut(s) 105
BaeI ACNNNNGTAYC 2 cut(s) 68, 101
BbsI GAAGAC 1 cut(s) 463
BbvCI CCTCAGC 1 cut(s) 657
BbvI GCAGC 1 cut(s) 227
BccI CCATC 2 cut(s) 39, 823
BcoDI GTCTC 3 cut(s) 43, 586, 599
BcuI ACTAGT 1 cut(s) 79
BfaI CTAG 3 cut(s) 80, 539, 582
BfmI CTRYAG 1 cut(s) 609
BfuAI ACCTGC 1 cut(s) 469
BisI GCNGC 1 cut(s) 216
BlsI GCNGC 1 cut(s) 217
Bme18I GGWCC 1 cut(s) 105
BmeT110I CYCGRG 1 cut(s) 374
BmgT120I GGNCC 3 cut(s) 105, 314, 645
BmiI GGNNCC 1 cut(s) 106
BmsI GCATC 1 cut(s) 234
BpiI GAAGAC 1 cut(s) 463
Bpu10I CCTNAGC 1 cut(s) 657
BpuEI CTTGAG 2 cut(s) 130, 461
Bse1I ACTGG 2 cut(s) 193, 738
BseGI GGATG 2 cut(s) 139, 228
BseMII CTCAG 4 cut(s) 60, 581, 648, 854
BseNI ACTGG 2 cut(s) 193, 738
BseXI GCAGC 1 cut(s) 227
BsgI GTGCAG 1 cut(s) 234
BshFI GGCC 3 cut(s) 315, 646, 878
BsiHKCI CYCGRG 1 cut(s) 374
BslFI GGGAC 2 cut(s) 118, 833
BsmAI GTCTC 3 cut(s) 43, 586, 599
BsmFI GGGAC 2 cut(s) 118, 833
BsnI GGCC 3 cut(s) 315, 646, 878
BsoBI CYCGRG 1 cut(s) 374
Bsp143I GATC 4 cut(s) 115, 370, 568, 577
BspACI CCGC 1 cut(s) 28
BspANI GGCC 3 cut(s) 315, 646, 878
BspCNI CTCAG 4 cut(s) 61, 582, 649, 855
BspLI GGNNCC 1 cut(s) 106
BspMAI CTGCAG 1 cut(s) 613
BspMI ACCTGC 1 cut(s) 469
BspPI GGATC 3 cut(s) 365, 572, 576
BsrI ACTGG 2 cut(s) 193, 738
BssMI GATC 4 cut(s) 115, 370, 568, 577
Bst4CI ACNGT 4 cut(s) 56, 236, 343, 799
Bst6I CTCTTC 1 cut(s) 537
BstDEI CTNAG 5 cut(s) 69, 499, 590, 657, 863
BstEII GGTNACC 1 cut(s) 362
BstF5I GGATG 2 cut(s) 139, 228
BstKTI GATC 4 cut(s) 118, 373, 571, 580
BstMAI GTCTC 3 cut(s) 43, 586, 599
BstMBI GATC 4 cut(s) 115, 370, 568, 577
BstMWI GCNNNNNNNGC 3 cut(s) 27, 287, 749
BstPI GGTNACC 1 cut(s) 362
BstSFI CTRYAG 1 cut(s) 609
BstV1I GCAGC 1 cut(s) 227
BstV2I GAAGAC 1 cut(s) 463
BsuRI GGCC 3 cut(s) 315, 646, 878
BtsCI GGATG 2 cut(s) 139, 228
BtsIMutI CAGTG 2 cut(s) 587, 745
BveI ACCTGC 1 cut(s) 469
CaiI CAGNNNCTG 1 cut(s) 188
Cfr13I GGNCC 3 cut(s) 105, 314, 645
Csp6I GTAC 2 cut(s) 379, 418
CviAII CATG 4 cut(s) 94, 332, 382, 722
CviQI GTAC 2 cut(s) 379, 418
DdeI CTNAG 5 cut(s) 69, 499, 590, 657, 863
DpnI GATC 4 cut(s) 117, 372, 570, 579
DpnII GATC 4 cut(s) 115, 370, 568, 577
DrdI GACNNNNNNGTC 1 cut(s) 406
DseDI GACNNNNNNGTC 1 cut(s) 406
Eam1104I CTCTTC 1 cut(s) 537
EarI CTCTTC 1 cut(s) 537
Eco47I GGWCC 1 cut(s) 105
Eco88I CYCGRG 1 cut(s) 374
Eco91I GGTNACC 1 cut(s) 362
EcoO109I RGGNCCY 1 cut(s) 105
EcoO65I GGTNACC 1 cut(s) 362
FaeI CATG 4 cut(s) 97, 335, 385, 725
FaqI GGGAC 2 cut(s) 118, 833
FatI CATG 4 cut(s) 93, 331, 381, 721
Fnu4HI GCNGC 1 cut(s) 216
FokI GGATG 2 cut(s) 146, 215
Fsp4HI GCNGC 1 cut(s) 216
FspBI CTAG 3 cut(s) 80, 539, 582
GluI GCNGC 1 cut(s) 216
HaeIII GGCC 3 cut(s) 315, 646, 878
Hin1II CATG 4 cut(s) 97, 335, 385, 725
HincII GTYRAC 2 cut(s) 399, 802
HindII GTYRAC 2 cut(s) 399, 802
HindIII AAGCTT 1 cut(s) 689
HinfI GANTC 5 cut(s) 128, 632, 791, 833, 867
HpaI GTTAAC 1 cut(s) 802
Hpy166II GTNNAC 6 cut(s) 249, 399, 418, 496, 802, 837
Hpy188I TCNGA 4 cut(s) 70, 133, 412, 640
Hpy188III TCNNGA 3 cut(s) 320, 374, 440
Hpy8I GTNNAC 6 cut(s) 249, 399, 418, 496, 802, 837
HpyAV CCTTC 3 cut(s) 56, 524, 559
HpyCH4III ACNGT 4 cut(s) 56, 236, 343, 799
HpyCH4IV ACGT 1 cut(s) 555
HpyCH4V TGCA 6 cut(s) 4, 174, 215, 522, 611, 625
HpyF10VI GCNNNNNNNGC 3 cut(s) 27, 287, 749
HpyF3I CTNAG 5 cut(s) 69, 499, 590, 657, 863
HpySE526I ACGT 1 cut(s) 555
Hsp92II CATG 4 cut(s) 97, 335, 385, 725
KspAI GTTAAC 1 cut(s) 802
Kzo9I GATC 4 cut(s) 115, 370, 568, 577
LpnPI CCDG 5 cut(s) 174, 204, 297, 474, 751
Lsp1109I GCAGC 1 cut(s) 227
LweI GCATC 1 cut(s) 234
MaeI CTAG 3 cut(s) 80, 539, 582
MaeII ACGT 1 cut(s) 555
MaeIII GTNAC 3 cut(s) 50, 362, 387
MalI GATC 4 cut(s) 117, 372, 570, 579
MboI GATC 4 cut(s) 115, 370, 568, 577
MboII GAAGA 4 cut(s) 428, 468, 554, 627
MluCI AATT 4 cut(s) 6, 45, 168, 849
MlyI GAGTC 1 cut(s) 842
MnlI CCTC 9 cut(s) 150, 327, 436, 538, 652, 699, 718, 810, 868
MseI TTAA 2 cut(s) 44, 801
MslI CAYNNNNRTG 4 cut(s) 123, 210, 237, 344
MwoI GCNNNNNNNGC 3 cut(s) 27, 287, 749
NdeII GATC 4 cut(s) 115, 370, 568, 577
NlaIII CATG 4 cut(s) 97, 335, 385, 725
NlaIV GGNNCC 1 cut(s) 106
NmuCI GTSAC 1 cut(s) 387
OliI CACNNNNGTG 1 cut(s) 344
PfeI GAWTC 4 cut(s) 128, 632, 791, 867
PkrI GCNGC 1 cut(s) 217
PleI GAGTC 1 cut(s) 841
PpsI GAGTC 1 cut(s) 841
PpuMI RGGWCCY 1 cut(s) 105
Psp5II RGGWCCY 1 cut(s) 105
PspEI GGTNACC 1 cut(s) 362
PspN4I GGNNCC 1 cut(s) 106
PspPI GGNCC 3 cut(s) 105, 314, 645
PspPPI RGGWCCY 1 cut(s) 105
PstI CTGCAG 1 cut(s) 613
PstNI CAGNNNCTG 1 cut(s) 188
RsaI GTAC 2 cut(s) 380, 419
RsaNI GTAC 2 cut(s) 379, 418
RseI CAYNNNNRTG 4 cut(s) 123, 210, 237, 344
SaqAI TTAA 2 cut(s) 44, 801
SatI GCNGC 1 cut(s) 216
Sau3AI GATC 4 cut(s) 115, 370, 568, 577
Sau96I GGNCC 3 cut(s) 105, 314, 645
SchI GAGTC 1 cut(s) 842
SfaNI GCATC 1 cut(s) 234
SfcI CTRYAG 1 cut(s) 609
SinI GGWCC 1 cut(s) 105
SmiMI CAYNNNNRTG 4 cut(s) 123, 210, 237, 344
SmlI CTYRAG 2 cut(s) 109, 440
SmoI CTYRAG 2 cut(s) 109, 440
SpeI ACTAGT 1 cut(s) 79
Sse9I AATT 4 cut(s) 6, 45, 168, 849
SsiI CCGC 1 cut(s) 28
SspI AATATT 1 cut(s) 769
SspMI CTAG 3 cut(s) 80, 539, 582
TaaI ACNGT 4 cut(s) 56, 236, 343, 799
TaiI ACGT 1 cut(s) 558
TaqI TCGA 2 cut(s) 305, 794
TasI AATT 4 cut(s) 6, 45, 168, 849
TatI WGTACW 2 cut(s) 378, 417
TfiI GAWTC 4 cut(s) 128, 632, 791, 867
Tru1I TTAA 2 cut(s) 44, 801
Tru9I TTAA 2 cut(s) 44, 801
TscAI CASTG 2 cut(s) 594, 745
TseFI GTSAC 1 cut(s) 387
TseI GCWGC 1 cut(s) 215
Tsp45I GTSAC 1 cut(s) 387
TspDTI ATGAA 7 cut(s) 75, 82, 141, 339, 549, 683, 735
TspRI CASTG 2 cut(s) 594, 745
VpaK11BI GGWCC 1 cut(s) 105
XapI RAATTY 3 cut(s) 6, 168, 849
XspI CTAG 3 cut(s) 80, 539, 582
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.