RchiOBHm_Chr1g0324441

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000413
Physical Location & Seq
Forward (+)
12164762 .. 12167194
2433 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55428

Sequence Viewer

Length: 2433 bp
ATGGGGCATCTTCGTATCCCATTACTCTCTCTGCTTGTTTTTCTCCTCAACCTCTCATCCTTTCACTTTCTCTCTTTAGCTGATGATTATTTCATCAACTGTGGTTCACATGAAAATGTGAGCCTCACTTCTGGCCAGAATTTCTCTGGGGAATCGAAGTCTGCAGGTTACTCTTTCTCCAAAAGCAAGGCTGTCAAAGACATCAACCAGTTGCCAGATATATCACCTCTATATAAGACAGCAAGAAGTTTCAATAAACCATTCTACTACCAGTTCAGCATCACTGAAGATGGTACTTATCTGGTACGCTTACATTTCTCAGCTTTCTCCTCCTCCTCCTCCTCAAATAATCTCTCCACGGCTGTTTTTGGTGTTTTGGATTCTAAGAATTTCACACTGTTGAACAATTTCACCGCCAAGAACACTACCTACTCCCCTGTGATAAAGGAATTCTTTCTCCGAATTGATATCACCGACTCATTTAGACTATATTTTACTCCTCAACCATCATCTTTTGCATTTGTAAATGCCATAGAATTATTCCTTTCCCCTGTAGATTTCATCCCTGAGAACTATACCAGTAATCTCCCTTTACATACAATTTACAGACTCAACGTTGGAGGCTCACCAGTAAATGACACAATAGGGAGAAAATGGGAAACAGATGATAGTCATATCTCTGATCAAAACTCTGCAAAGAAAGCCACTCCTCAAAGTACACTCAATTTAGATCGCTACGGAAAAATTGATGGTTTGGTTGCATCTAATGCGTCTGTAGCCCCACTTTTAGTTTACCAGACTGCTAGAGAGATGACGAATGTCACTAGTAACATAACATGGCTTTTTAGTGTGAGTAGTAAAGCTAGACACATTGTCCGGGCTCACTTCTGTGATATTGTTGGTCAGCCTGGTAACATTATATTTAACTTGTATGCAAATGGCAACTTCCGCAAGGAGATCGGCATCATTTCTCAATATTCGGCTGTTCCCTTCTTCTATGACTTTGTGGTGAATTACAGTGAGTCTGAACTCTTTAATATTAGCATAAGACCTAACAATGGTGCTTCTGAACAAAATGCATTTCTAAATGGTCTGGAAATATTGGAGATAGTGGAGGGATTAGCTCCAATTCCCAATGTGAAAGAGTCCAAGAAGAATGTTGTGGCTCCTGTAGTTGGTTCAGTTCTTGGAGGCCTGTCACTCATCTGCGTTTTAACAGTTGGATTTGTGTTTGGTTTCAGACACAGAAAGGCAGAAAAGCATGTGGAGACTTCAGTTTGGTCACCAATGCCTGCAAATGGAGGAGGGAGTTCTCACAGCTCCGCTCTCAATCTAGATTATCTTGGGTTGAAGATATCTTTCAATGAAATTCAGTCTGCAACAAACAACTTTGACACAAAGTTGGTGATAGGTAAGGGTGGCTTTGGGAATGTTTATAGAGGCACTCTTTTGAATGGCACAAAAGTGGCTGTGAAGCGAGCTTATAAGCGAGATGAGCATGGGTCAGGATCAGGCCAAGGCCTCCTAGAATTCAAAACAGAAATCATAGTGTTATCGAAAATCCGCCACCGCCATCTTGTCTCCTTAATTGGTTATTGTAATGAAAGGTCTGAAATGATACTAGTGTATGAGTTCATGGAAAAAGGGACGTTGAGAGATCATTTGTATGATTCAGACGTGCCTCGCTTGTCGTGGAATCAAAGACTTGAAATTTGTACTGGAGCAGCAAGGGGTCTTCATTATCTCCACACAGGTGCAGCTAGGGGAATCATTCACCGAGATGTCAAGTCCAGCAACATATTGCTTGATGAAAACCATGTTGCCAAAGTTGCTGACTTTGGCCTTTCGAGATCTGGAGCTCTCGATGAAACGCATGTCAGCACTAATGTTAAAGGCACTTTTGGTTACCTTGATCCTGAGTACATGATGTCTGAACAATTGACAGAAAAATCTGATGTTTACTCATTTGGTGTAGTTCTTCTTGAGGTGTTATGTGGAAGACCTGCTATTGATCCAACGCTTCCAAGAGAGCAAATGAACTTGGCTGAATGGGGAATGCTTTGCAAGAAAAAAGGGTTGCTTGAACAGATTGTTGATTCTTCATTGAAAAATCAGATTGATCCTAGCTCACTAAGAACTTTTGGTGAGACGGCTGAGAAGTGTTTGCAAGATGATGCTTCTGATAGGCCAACAATGGCCGATGTGCTGTGGGATTTGGAATATGCATTACAGCTTCAGAAAACAACAAAGCTTAAAGAGGCTCATGAGGACAGCACCACCATTGCTGCTTCATCAGCAGCATTCAGTTTGCCAATTGTTCAGCGTTTTCCTTCACTTGGTTCGACAACAAATGGAGATGATACGAGGGACAGCGACTTGGACACAACAGAAAACAAAATTTTCTCCCAATTGAAAATTGGTGATGCCAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

810

Amino Acids

89.68

Weight (kDa)

6.26

Isoelectric Point (pI)

35.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 30 - 111 5.7e-08 Malectin domain
Malectin_like PF12819 32 - 369 1.2e-22 Malectin-like domain
Pkinase PF00069 467 - 736 2.9e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 468 - 737 8.5e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000413)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23200
fragaria_vesca FvH4_1g16860 FvH4_1g16861
malus_domestica MD02G1018900.v1.1 MD15G1289500.v1.1 MD15G1289600.v1.1 MD15G1289700.v1.1
prunus_persica Prupe.6G227800_v2.0.a1 Prupe.6G228000_v2.0.a1 Prupe.6G228100_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228300_v2.0.a1
pyrus_communis pycom02g01680 pycom02g01690 pycom15g25310 pycom15g25330 pycom15g25340
rosa_chinensis RchiOBHm_Chr1g0324321 RchiOBHm_Chr1g0324331 RchiOBHm_Chr1g0324341 RchiOBHm_Chr1g0324401 RchiOBHm_Chr1g0324441 RchiOBHm_Chr2g0106751 RchiOBHm_Chr2g0106761 RchiOBHm_Chr2g0106771 RchiOBHm_Chr2g0106781 RchiOBHm_Chr2g0106801 RchiOBHm_Chr2g0106811 RchiOBHm_Chr2g0106821
rosa_laevigata RLG00000017539 RLG00000017540 RLG00000017541 RLG00000030200 RLG00000030201
rosa_multiflora Rmu_sc0000751.1_g000001 Rmu_sc0000751.1_g000002 Rmu_sc0000751.1_g000003 Rmu_sc0000751.1_g000005 Rmu_sc0000751.1_g000007 Rmu_sc0000751.1_g000008 Rmu_sc0000751.1_g000018 Rmu_sc0000751.1_g000019 Rmu_sc0000751.1_g000026 Rmu_sc0000751.1_g000027 Rmu_sc0000751.1_g000028 Rmu_sc0000751.1_g000029 Rmu_sc0003410.1_g000012 Rmu_sc0004000.1_g000023 Rmu_sc0004000.1_g000024 Rmu_sc0004082.1_g000015 Rmu_sc0004082.1_g000017 Rmu_sc0026507.1_g000001 Rmu_sc0031196.1_g000001 Rmu_sc0039591.1_g000001
rosa_roxburghii Rroxscaffold_159G00432710 Rroxscaffold_159G00432780 Rroxscaffold_159G00432840 Rroxscaffold_159G00433010 Rroxscaffold_2G00098070 Rroxscaffold_2G00136770 Rroxscaffold_4G00325540 Rroxscaffold_4G00325630 Rroxscaffold_4G00325680
rosa_rugosa Rorug01G0045700 Rorug02G0138500 Rorug02G0138600 Rorug02G0138700 Rorug02G0138800 Rorug02G0138900
rosa_samantha Rh1AG061400 Rh1BG052300 Rh1CG063400 Rh1CG063700 Rh1DG067800 Rh2AG189400 Rh2AG189800 Rh2AG190000 Rh2AG190100 Rh2BG201100 Rh2BG201300 Rh2CG194500 Rh2CG194600 Rh2CG194700 Rh2DG195700 Rh2DG195900 Rh2DG196300 Rh2DG196400 Rh2DG196500 Rh2DG196600
rosa_wichuraiana Rw1G004230 Rw1G005210 Rw2G014900 Rw2G014910 Rw2G014930 Rw2G014940 Rw2G014950 Rw2G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1485
Acc36I ACCTGC 2 cut(s) 155, 2011
AccBSI CCGCTC 1 cut(s) 1325
AciI CCGC 5 cut(s) 414, 949, 1323, 1564, 1570
AclI AACGTT 1 cut(s) 615
AclWI GGATC 4 cut(s) 1516, 1907, 2006, 2114
AcoI YGGCCR 2 cut(s) 133, 2196
AcsI RAATTY 7 cut(s) 139, 388, 449, 1368, 1529, 1710, 2397
AcuI CTGAAG 3 cut(s) 306, 1257, 2219
AfaI GTAC 5 cut(s) 295, 306, 718, 1717, 1922
AfiI CCNNNNNNNGG 4 cut(s) 1058, 1175, 1298, 2336
AhdI GACNNNNNGTC 1 cut(s) 872
AhlI ACTAGT 2 cut(s) 824, 1621
AjiI CACGTC 1 cut(s) 1678
AjnI CCWGG 1 cut(s) 907
AleI CACNNNNGTG 3 cut(s) 888, 1463, 1752
Alw21I GWGCWC 1 cut(s) 1861
Alw26I GTCTC 3 cut(s) 1262, 1585, 2141
AlwI GGATC 4 cut(s) 1516, 1907, 2006, 2114
AoxI GGCC 7 cut(s) 133, 1192, 1513, 1519, 1840, 2186, 2196
ApeKI GCWGC 4 cut(s) 1724, 1757, 2285, 2297
ApoI RAATTY 7 cut(s) 139, 388, 449, 1368, 1529, 1710, 2397
ArsI GACNNNNNNTTYG 2 cut(s) 1695, 1727
Asp700I GAANNNNTTC 2 cut(s) 407, 453
AsuC2I CCSGG 1 cut(s) 878
BaeI ACNNNNGTAYC 2 cut(s) 1610, 1643
BalI TGGCCA 1 cut(s) 135
BanII GRGCYC 2 cut(s) 883, 1861
BbsI GAAGAC 2 cut(s) 1727, 2005
Bbv12I GWGCWC 1 cut(s) 1861
BbvI GCAGC 4 cut(s) 1736, 1769, 2272, 2309
BccI CCATC 4 cut(s) 284, 514, 743, 1581
BceAI ACGGC 2 cut(s) 375, 2166
BcgI CGANNNNNNTGC 2 cut(s) 940, 974
BciT130I CCWGG 1 cut(s) 909
BciVI GTATCC 1 cut(s) 26
BclI TGATCA 1 cut(s) 682
BcnI CCSGG 1 cut(s) 878
BcoDI GTCTC 3 cut(s) 1262, 1585, 2141
BcuI ACTAGT 2 cut(s) 824, 1621
BfaI CTAG 8 cut(s) 804, 825, 864, 1334, 1526, 1622, 1761, 2124
BfmI CTRYAG 4 cut(s) 162, 552, 774, 1170
BfuAI ACCTGC 2 cut(s) 155, 2011
BfuI GTATCC 1 cut(s) 26
BglII AGATCT 1 cut(s) 1850
BisI GCNGC 4 cut(s) 1725, 1758, 2286, 2298
BlsI GCNGC 4 cut(s) 1726, 1759, 2287, 2299
Bme1390I CCNGG 2 cut(s) 878, 909
BmeRI GACNNNNNGTC 1 cut(s) 872
BmgBI CACGTC 1 cut(s) 1678
BmiI GGNNCC 1 cut(s) 1167
BmrFI CCNGG 2 cut(s) 878, 909
BmsI GCATC 6 cut(s) 16, 288, 770, 972, 2164, 2413
BoxI GACNNNNGTC 1 cut(s) 818
BpiI GAAGAC 2 cut(s) 1727, 2005
BpmI CTGGAG 2 cut(s) 1740, 1875
BpuEI CTTGAG 1 cut(s) 2003
BpuMI CCSGG 1 cut(s) 878
BsaBI GATNNNNATC 1 cut(s) 962
BsaJI CCNNGG 2 cut(s) 357, 1516
BsaXI ACNNNNNCTCC 2 cut(s) 161, 191
Bsc4I CCNNNNNNNGG 4 cut(s) 1058, 1175, 1298, 2336
Bse1I ACTGG 5 cut(s) 208, 271, 579, 629, 1723
Bse3DI GCAATG 1 cut(s) 2280
Bse8I GATNNNNATC 1 cut(s) 962
BseBI CCWGG 1 cut(s) 909
BseDI CCNNGG 2 cut(s) 357, 1516
BseGI GGATG 2 cut(s) 56, 561
BseJI GATNNNNATC 1 cut(s) 962
BseLI CCNNNNNNNGG 4 cut(s) 1058, 1175, 1298, 2336
BseMI GCAATG 1 cut(s) 2280
BseMII CTCAG 4 cut(s) 333, 558, 1908, 2145
BseNI ACTGG 5 cut(s) 208, 271, 579, 629, 1723
BseRI GAGGAG 9 cut(s) 35, 319, 322, 325, 328, 331, 489, 699, 1317
BseXI GCAGC 4 cut(s) 1736, 1769, 2272, 2309
BsgI GTGCAG 1 cut(s) 1776
BshFI GGCC 7 cut(s) 135, 1194, 1515, 1521, 1842, 2188, 2198
BsiHKAI GWGCWC 1 cut(s) 1861
BsiSI CCGG 1 cut(s) 877
BslFI GGGAC 2 cut(s) 1660, 2381
BslI CCNNNNNNNGG 4 cut(s) 1058, 1175, 1298, 2336
BsmAI GTCTC 3 cut(s) 1262, 1585, 2141
BsmBI CGTCTC 1 cut(s) 2141
BsmFI GGGAC 2 cut(s) 1660, 2381
BsmI GAATGC 2 cut(s) 2061, 2300
BsnI GGCC 7 cut(s) 135, 1194, 1515, 1521, 1842, 2188, 2198
Bsp1286I GDGCHC 2 cut(s) 883, 1861
Bsp143I GATC 9 cut(s) 682, 730, 957, 1508, 1657, 1850, 1912, 2011, 2119
BspACI CCGC 5 cut(s) 414, 949, 1323, 1564, 1570
BspANI GGCC 7 cut(s) 135, 1194, 1515, 1521, 1842, 2188, 2198
BspCNI CTCAG 4 cut(s) 332, 559, 1909, 2146
BspHI TCATGA 1 cut(s) 2263
BspLI GGNNCC 1 cut(s) 1167
BspMAI CTGCAG 1 cut(s) 166
BspMI ACCTGC 2 cut(s) 155, 2011
BspPI GGATC 4 cut(s) 1516, 1907, 2006, 2114
BsrBI CCGCTC 1 cut(s) 1325
BsrDI GCAATG 1 cut(s) 2280
BsrI ACTGG 5 cut(s) 208, 271, 579, 629, 1723
BssECI CCNNGG 2 cut(s) 357, 1516
BssMI GATC 9 cut(s) 682, 730, 957, 1508, 1657, 1850, 1912, 2011, 2119
BssT1I CCWWGG 1 cut(s) 1516
Bst2UI CCWGG 1 cut(s) 909
Bst4CI ACNGT 4 cut(s) 101, 399, 1019, 1219
BstAPI GCANNNNNTGC 1 cut(s) 767
BstC8I GCNNGC 2 cut(s) 1293, 1479
BstDEI CTNAG 6 cut(s) 319, 384, 567, 1917, 2132, 2154
BstDSI CCRYGG 1 cut(s) 357
BstEII GGTNACC 2 cut(s) 1281, 1904
BstF5I GGATG 2 cut(s) 56, 561
BstKTI GATC 9 cut(s) 685, 733, 960, 1511, 1660, 1853, 1915, 2014, 2122
BstMAI GTCTC 3 cut(s) 1262, 1585, 2141
BstMBI GATC 9 cut(s) 682, 730, 957, 1508, 1657, 1850, 1912, 2011, 2119
BstMWI GCNNNNNNNGC 7 cut(s) 701, 767, 776, 948, 1495, 1829, 2294
BstNI CCWGG 1 cut(s) 909
BstNSI RCATGY 2 cut(s) 1265, 1877
BstPAI GACNNNNGTC 1 cut(s) 818
BstPI GGTNACC 2 cut(s) 1281, 1904
BstSCI CCNGG 2 cut(s) 876, 907
BstSFI CTRYAG 4 cut(s) 162, 552, 774, 1170
BstV1I GCAGC 4 cut(s) 1736, 1769, 2272, 2309
BstV2I GAAGAC 2 cut(s) 1727, 2005
BstX2I RGATCY 1 cut(s) 1850
BstYI RGATCY 1 cut(s) 1850
BsuI GTATCC 1 cut(s) 26
BsuRI GGCC 7 cut(s) 135, 1194, 1515, 1521, 1842, 2188, 2198
BtgI CCRYGG 1 cut(s) 357
BtrI CACGTC 1 cut(s) 1678
BtsCI GGATG 2 cut(s) 56, 561
BtsIMutI CAGTG 3 cut(s) 282, 395, 1024
BveI ACCTGC 2 cut(s) 155, 2011
Cac8I GCNNGC 2 cut(s) 1293, 1479
CciI TCATGA 1 cut(s) 2263
CseI GACGC 1 cut(s) 759
Csp6I GTAC 5 cut(s) 294, 305, 717, 1716, 1921
CviAII CATG 9 cut(s) 110, 837, 1262, 1499, 1636, 1817, 1874, 1924, 2264
CviQI GTAC 5 cut(s) 294, 305, 717, 1716, 1921
DdeI CTNAG 6 cut(s) 319, 384, 567, 1917, 2132, 2154
DpnI GATC 9 cut(s) 684, 732, 959, 1510, 1659, 1852, 1914, 2013, 2121
DpnII GATC 9 cut(s) 682, 730, 957, 1508, 1657, 1850, 1912, 2011, 2119
DriI GACNNNNNGTC 1 cut(s) 872
EaeI YGGCCR 2 cut(s) 133, 2196
Eam1105I GACNNNNNGTC 1 cut(s) 872
EciI GGCGGA 1 cut(s) 1553
Ecl136II GAGCTC 1 cut(s) 1859
Eco130I CCWWGG 1 cut(s) 1516
Eco147I AGGCCT 2 cut(s) 1194, 1521
Eco24I GRGCYC 2 cut(s) 883, 1861
Eco32I GATATC 2 cut(s) 469, 1356
Eco53kI GAGCTC 1 cut(s) 1859
Eco57I CTGAAG 3 cut(s) 306, 1257, 2219
Eco91I GGTNACC 2 cut(s) 1281, 1904
EcoICRI GAGCTC 1 cut(s) 1859
EcoO65I GGTNACC 2 cut(s) 1281, 1904
EcoRI GAATTC 2 cut(s) 449, 1529
EcoRII CCWGG 1 cut(s) 907
EcoRV GATATC 2 cut(s) 469, 1356
EcoT14I CCWWGG 1 cut(s) 1516
EcoT22I ATGCAT 2 cut(s) 1081, 2227
EcoT38I GRGCYC 2 cut(s) 883, 1861
ErhI CCWWGG 1 cut(s) 1516
Esp3I CGTCTC 1 cut(s) 2141
FaeI CATG 9 cut(s) 113, 840, 1265, 1502, 1639, 1820, 1877, 1927, 2267
FalI AAGNNNNNCTT 6 cut(s) 437, 469, 1406, 1438, 2064, 2096
FaqI GGGAC 2 cut(s) 1660, 2381
FatI CATG 9 cut(s) 109, 836, 1261, 1498, 1635, 1816, 1873, 1923, 2263
FbaI TGATCA 1 cut(s) 682
Fnu4HI GCNGC 4 cut(s) 1725, 1758, 2286, 2298
FokI GGATG 2 cut(s) 43, 548
FriOI GRGCYC 2 cut(s) 883, 1861
Fsp4HI GCNGC 4 cut(s) 1725, 1758, 2286, 2298
FspBI CTAG 8 cut(s) 804, 825, 864, 1334, 1526, 1622, 1761, 2124
GluI GCNGC 4 cut(s) 1725, 1758, 2286, 2298
GsuI CTGGAG 2 cut(s) 1740, 1875
HaeIII GGCC 7 cut(s) 135, 1194, 1515, 1521, 1842, 2188, 2198
HapII CCGG 1 cut(s) 877
HgaI GACGC 1 cut(s) 759
Hin1II CATG 9 cut(s) 113, 840, 1265, 1502, 1639, 1820, 1877, 1927, 2267
HindIII AAGCTT 1 cut(s) 2249
HpaII CCGG 1 cut(s) 877
Hpy166II GTNNAC 4 cut(s) 107, 719, 793, 1960
Hpy188III TCNNGA 9 cut(s) 1094, 1334, 1506, 1848, 1854, 1862, 1916, 1982, 2264
Hpy8I GTNNAC 4 cut(s) 107, 719, 793, 1960
HpyAV CCTTC 2 cut(s) 1000, 2340
HpyCH4III ACNGT 4 cut(s) 101, 399, 1019, 1219
HpyCH4IV ACGT 3 cut(s) 615, 1649, 1677
HpyF10VI GCNNNNNNNGC 7 cut(s) 701, 767, 776, 948, 1495, 1829, 2294
HpyF3I CTNAG 6 cut(s) 319, 384, 567, 1917, 2132, 2154
HpySE526I ACGT 3 cut(s) 615, 1649, 1677
Hsp92II CATG 9 cut(s) 113, 840, 1265, 1502, 1639, 1820, 1877, 1927, 2267
Ksp22I TGATCA 1 cut(s) 682
Kzo9I GATC 9 cut(s) 682, 730, 957, 1508, 1657, 1850, 1912, 2011, 2119
LmnI GCTCC 5 cut(s) 1129, 1171, 1325, 1721, 1856
Lsp1109I GCAGC 4 cut(s) 1736, 1769, 2272, 2309
LweI GCATC 6 cut(s) 16, 288, 770, 972, 2164, 2413
MaeI CTAG 8 cut(s) 804, 825, 864, 1334, 1526, 1622, 1761, 2124
MaeII ACGT 3 cut(s) 615, 1649, 1677
MaeIII GTNAC 7 cut(s) 167, 820, 827, 911, 1197, 1281, 1904
MalI GATC 9 cut(s) 684, 732, 959, 1510, 1659, 1852, 1914, 2013, 2121
MbiI CCGCTC 1 cut(s) 1325
MboI GATC 9 cut(s) 682, 730, 957, 1508, 1657, 1850, 1912, 2011, 2119
MboII GAAGA 8 cut(s) 299, 985, 1165, 1363, 1727, 1970, 2010, 2091
MfeI CAATTG 3 cut(s) 1937, 2313, 2408
MflI RGATCY 1 cut(s) 1850
MhlI GDGCHC 2 cut(s) 883, 1861
MlsI TGGCCA 1 cut(s) 135
MluNI TGGCCA 1 cut(s) 135
MlyI GAGTC 4 cut(s) 470, 603, 1031, 1154
MmeI TCCRAC 3 cut(s) 598, 1201, 2039
Mox20I TGGCCA 1 cut(s) 135
Mph1103I ATGCAT 2 cut(s) 1081, 2227
MroXI GAANNNNTTC 2 cut(s) 407, 453
MscI TGGCCA 1 cut(s) 135
MseI TTAA 6 cut(s) 924, 1035, 1214, 1586, 1890, 2253
MslI CAYNNNNRTG 6 cut(s) 114, 888, 1463, 1665, 1752, 1779
Msp20I TGGCCA 1 cut(s) 135
MspI CCGG 1 cut(s) 877
MspR9I CCNGG 2 cut(s) 878, 909
MunI CAATTG 3 cut(s) 1937, 2313, 2408
Mva1269I GAATGC 2 cut(s) 2061, 2300
MvaI CCWGG 1 cut(s) 909
MwoI GCNNNNNNNGC 7 cut(s) 701, 767, 776, 948, 1495, 1829, 2294
NciI CCSGG 1 cut(s) 878
NdeII GATC 9 cut(s) 682, 730, 957, 1508, 1657, 1850, 1912, 2011, 2119
NlaIII CATG 9 cut(s) 113, 840, 1265, 1502, 1639, 1820, 1877, 1927, 2267
NlaIV GGNNCC 1 cut(s) 1167
NmuCI GTSAC 3 cut(s) 820, 1197, 1281
NsiI ATGCAT 2 cut(s) 1081, 2227
NspI RCATGY 2 cut(s) 1265, 1877
OliI CACNNNNGTG 3 cut(s) 888, 1463, 1752
PagI TCATGA 1 cut(s) 2263
PceI AGGCCT 2 cut(s) 1194, 1521
PctI GAATGC 2 cut(s) 2061, 2300
PdmI GAANNNNTTC 2 cut(s) 407, 453
PfeI GAWTC 6 cut(s) 152, 380, 1670, 1696, 1767, 2096
PkrI GCNGC 4 cut(s) 1726, 1759, 2287, 2299
PleI GAGTC 4 cut(s) 470, 603, 1030, 1153
PpsI GAGTC 4 cut(s) 470, 603, 1030, 1153
PshAI GACNNNNGTC 1 cut(s) 818
PsiI TTATAA 1 cut(s) 1485
Psp124BI GAGCTC 1 cut(s) 1861
Psp1406I AACGTT 1 cut(s) 615
Psp6I CCWGG 1 cut(s) 907
PspEI GGTNACC 2 cut(s) 1281, 1904
PspGI CCWGG 1 cut(s) 907
PspN4I GGNNCC 1 cut(s) 1167
PsrI GAACNNNNNNTAC 2 cut(s) 413, 445
PstI CTGCAG 1 cut(s) 166
PsuI RGATCY 1 cut(s) 1850
RsaI GTAC 5 cut(s) 295, 306, 718, 1717, 1922
RsaNI GTAC 5 cut(s) 294, 305, 717, 1716, 1921
RseI CAYNNNNRTG 6 cut(s) 114, 888, 1463, 1665, 1752, 1779
SacI GAGCTC 1 cut(s) 1861
SaqAI TTAA 6 cut(s) 924, 1035, 1214, 1586, 1890, 2253
SatI GCNGC 4 cut(s) 1725, 1758, 2286, 2298
Sau3AI GATC 9 cut(s) 682, 730, 957, 1508, 1657, 1850, 1912, 2011, 2119
SchI GAGTC 4 cut(s) 470, 603, 1031, 1154
ScrFI CCNGG 2 cut(s) 878, 909
SduI GDGCHC 2 cut(s) 883, 1861
SfaNI GCATC 6 cut(s) 16, 288, 770, 972, 2164, 2413
SfcI CTRYAG 4 cut(s) 162, 552, 774, 1170
SmiMI CAYNNNNRTG 6 cut(s) 114, 888, 1463, 1665, 1752, 1779
SmlI CTYRAG 1 cut(s) 1982
SmoI CTYRAG 1 cut(s) 1982
SpeI ACTAGT 2 cut(s) 824, 1621
SseBI AGGCCT 2 cut(s) 1194, 1521
SsiI CCGC 5 cut(s) 414, 949, 1323, 1564, 1570
SspI AATATT 3 cut(s) 977, 1039, 1101
SspMI CTAG 8 cut(s) 804, 825, 864, 1334, 1526, 1622, 1761, 2124
SstI GAGCTC 1 cut(s) 1861
StuI AGGCCT 2 cut(s) 1194, 1521
StyD4I CCNGG 2 cut(s) 876, 907
StyI CCWWGG 1 cut(s) 1516
TaaI ACNGT 4 cut(s) 101, 399, 1019, 1219
TaiI ACGT 3 cut(s) 618, 1652, 1680
TaqI TCGA 5 cut(s) 155, 1556, 1847, 1863, 2342
TatI WGTACW 3 cut(s) 716, 1715, 1920
TfiI GAWTC 6 cut(s) 152, 380, 1670, 1696, 1767, 2096
Tru1I TTAA 6 cut(s) 924, 1035, 1214, 1586, 1890, 2253
Tru9I TTAA 6 cut(s) 924, 1035, 1214, 1586, 1890, 2253
TscAI CASTG 3 cut(s) 289, 402, 1024
TseFI GTSAC 3 cut(s) 820, 1197, 1281
TseI GCWGC 4 cut(s) 1724, 1757, 2285, 2297
Tsp45I GTSAC 3 cut(s) 820, 1197, 1281
TspGWI ACGGA 1 cut(s) 753
TspRI CASTG 3 cut(s) 289, 402, 1024
XapI RAATTY 7 cut(s) 139, 388, 449, 1368, 1529, 1710, 2397
XbaI TCTAGA 1 cut(s) 1333
XceI RCATGY 2 cut(s) 1265, 1877
XcmI CCANNNNNNNNNTGG 2 cut(s) 143, 2414
XmnI GAANNNNTTC 2 cut(s) 407, 453
XspI CTAG 8 cut(s) 804, 825, 864, 1334, 1526, 1622, 1761, 2124
Zsp2I ATGCAT 2 cut(s) 1081, 2227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.