Rmu_sc0003410.1_g000012

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003410.1
OG0000413
Physical Location & Seq
Forward (+)
64061 .. 66484
2424 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003410.1_g000012.1.cds

Sequence Viewer

Length: 2424 bp
atggaacatcttcgaatcccattactctctctgattgtttttctcctcaacctctcatcccttcactttctctctttagctgatgattatttcatcaactgtggttcacatgataatgtgcgcctcactcctggcccgaatttctctggggaatcgaagtccggtttcactttctccaaaagcaaggctgtcaaagacatcaaccagttgctagatatatcacctctatataagacagcaagaggtttcaataaaccattctactaccagttctgcatcactgaagatggtacttatctggtacgcttgcatttctcagctttctcctcctcctcgaataatctctccacggctgtttttggtgttttggattctaataatttcacactgttgaacaatttcacttccaagaacactaccaactcccctgtgataaaggaattctttctccgaattgatattacagactcatttagactatattttactcctcaaccatcatcttttgcatttgtaaatgccatagagttattccttgcccctatagatttcatcgctgagaactatatcagtaatctccctttacacacaatttacagactcaacgttggaggctcaccagtaaatgacaacatagggagaaactgggaaacagatgatagtcatatttctgatcaaaactctgcaaagaaagccccttctcaaaatatactcaatttaaattactttggacaaatttatggtttcgttgtatctaatgagtctgtagccccacttttggtttaccagactgctagagagatgacgaatgtcactagtaacataacatggttttttagtgtgagtagtaaagctagacacattgtccgggctcacttctgtgacattgttggtcagcctggtgacattatatttaacttgtatgcaaatggcaacttgcgcaaggagatcggcatcatttctgtatatttggctgttcccttctactatgactttgtggtgaattatagtgagtctgaactctttaatatcagcataggacctaataagaatggtgcttctgaacaaaatgcatttctaaatggtctggaaatattggagatagtggagggatcagctccaattcccaatgtgaaagattctaagaagaatgttgtggctcctgtggttggttcagttcttggaggtctgtcactcatctgcgttttaatagttgggtttgtgttcggttttagccacagaaaggcagaaaagcgtgtggagacttcagtttggtcaccaatgcctgcaaatggaggagggagttttcacagctcccctctcaatctaaattatctcgagttgaagatatctttcaatgaaattcagtctgcaacgaacaactttgacacaaagttggtgataggtaagggtggctttgggaatgtttatagaggcactcttttcaatggcacaaaagtggctgtgaagcgagcttacaagcaagatgagcatgggtcaggatcagcccaaggcctcctagaattcgaaacagaaatcatagtgttatcgaaaatccgctaccgccatcttgtctccttaattggttactgtaatgaaaggtctgaaatgatactagtgtatgagttcatggaaaaagggacgttgagagatcatttgtatgattcaaacgtgcctcgcttgacttggaagcaaagacttgaaatttgtactggagcaacaaggggtcttcattatctccacacaggtgcagctgggggaatcattcaccgagatgtcaagtccaccaacatattgcttgatgaaaaccatgttgccaaagttgctgactttggcctttcgagatctagagctcttgatgaaacgcatgtcagcactaatgttaaaggcacttttggttaccttgatcctgagtacatgatgtctgaacaattgacagaaaaatctgatgtttactcatttggtgtagttcttcttgaggtgttatgtggaagacctgctattgatccaacgcttccaagagagcaaatgaacttggctgaatggggaatgctttgcatgaaaaaagggttgcttgaacagattgttgattcttcattgaaaaatcagattgattctagctcactcagaatgtttgctgagacggctgagaagtgtttgcaagaagatgcttctgataggccaacaatggccgatgtgctgtgggatttggaatatgcattacagcttcagaaaacaacaaagcttaaagaggctcatgaggacagcaccaccattgatgcttcatcagcagcattcagtttgccaattgttcagcgttttccttcacttggttcgacaacaaatggagatgatatgagggacagcgacttggacacaacaggaaacaaaattttctgccaattgaaaattggtgatgcctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

807

Amino Acids

89.78

Weight (kDa)

5.74

Isoelectric Point (pI)

36.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000413)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23200
fragaria_vesca FvH4_1g16860 FvH4_1g16861
malus_domestica MD02G1018900.v1.1 MD15G1289500.v1.1 MD15G1289600.v1.1 MD15G1289700.v1.1
prunus_persica Prupe.6G227800_v2.0.a1 Prupe.6G228000_v2.0.a1 Prupe.6G228100_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228300_v2.0.a1
pyrus_communis pycom02g01680 pycom02g01690 pycom15g25310 pycom15g25330 pycom15g25340
rosa_chinensis RchiOBHm_Chr1g0324321 RchiOBHm_Chr1g0324331 RchiOBHm_Chr1g0324341 RchiOBHm_Chr1g0324401 RchiOBHm_Chr1g0324441 RchiOBHm_Chr2g0106751 RchiOBHm_Chr2g0106761 RchiOBHm_Chr2g0106771 RchiOBHm_Chr2g0106781 RchiOBHm_Chr2g0106801 RchiOBHm_Chr2g0106811 RchiOBHm_Chr2g0106821
rosa_laevigata RLG00000017539 RLG00000017540 RLG00000017541 RLG00000030200 RLG00000030201
rosa_multiflora Rmu_sc0000751.1_g000001 Rmu_sc0000751.1_g000002 Rmu_sc0000751.1_g000003 Rmu_sc0000751.1_g000005 Rmu_sc0000751.1_g000007 Rmu_sc0000751.1_g000008 Rmu_sc0000751.1_g000018 Rmu_sc0000751.1_g000019 Rmu_sc0000751.1_g000026 Rmu_sc0000751.1_g000027 Rmu_sc0000751.1_g000028 Rmu_sc0000751.1_g000029 Rmu_sc0003410.1_g000012 Rmu_sc0004000.1_g000023 Rmu_sc0004000.1_g000024 Rmu_sc0004082.1_g000015 Rmu_sc0004082.1_g000017 Rmu_sc0026507.1_g000001 Rmu_sc0031196.1_g000001 Rmu_sc0039591.1_g000001
rosa_roxburghii Rroxscaffold_159G00432710 Rroxscaffold_159G00432780 Rroxscaffold_159G00432840 Rroxscaffold_159G00433010 Rroxscaffold_2G00098070 Rroxscaffold_2G00136770 Rroxscaffold_4G00325540 Rroxscaffold_4G00325630 Rroxscaffold_4G00325680
rosa_rugosa Rorug01G0045700 Rorug02G0138500 Rorug02G0138600 Rorug02G0138700 Rorug02G0138800 Rorug02G0138900
rosa_samantha Rh1AG061400 Rh1BG052300 Rh1CG063400 Rh1CG063700 Rh1DG067800 Rh2AG189400 Rh2AG189800 Rh2AG190000 Rh2AG190100 Rh2BG201100 Rh2BG201300 Rh2CG194500 Rh2CG194600 Rh2CG194700 Rh2DG195700 Rh2DG195900 Rh2DG196300 Rh2DG196400 Rh2DG196500 Rh2DG196600
rosa_wichuraiana Rw1G004230 Rw1G005210 Rw2G014900 Rw2G014910 Rw2G014930 Rw2G014940 Rw2G014950 Rw2G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 941
Acc36I ACCTGC 1 cut(s) 2005
AciI CCGC 2 cut(s) 1558, 1564
AclI AACGTT 1 cut(s) 606
AclWI GGATC 4 cut(s) 1120, 1510, 1901, 2000
AcoI YGGCCR 1 cut(s) 2190
AcsI RAATTY 7 cut(s) 139, 440, 735, 1362, 1523, 1704, 2391
AcuI CTGAAG 3 cut(s) 303, 1251, 2213
AfaI GTAC 4 cut(s) 292, 303, 1711, 1916
AfiI CCNNNNNNNGG 5 cut(s) 778, 1169, 1243, 1292, 2330
AhdI GACNNNNNGTC 1 cut(s) 863
AhlI ACTAGT 2 cut(s) 815, 1615
AjnI CCWGG 2 cut(s) 130, 898
AleI CACNNNNGTG 3 cut(s) 879, 1457, 1746
Alw21I GWGCWC 1 cut(s) 1855
Alw26I GTCTC 3 cut(s) 1256, 1579, 2135
AlwI GGATC 4 cut(s) 1120, 1510, 1901, 2000
Ama87I CYCGRG 1 cut(s) 1337
AoxI GGCC 5 cut(s) 133, 1513, 1834, 2180, 2190
ApeKI GCWGC 2 cut(s) 1751, 2291
ApoI RAATTY 7 cut(s) 139, 440, 735, 1362, 1523, 1704, 2391
ArsI GACNNNNNNTTYG 2 cut(s) 1689, 1721
Asp700I GAANNNNTTC 3 cut(s) 9, 398, 444
AspLEI GCGC 2 cut(s) 123, 942
AspS9I GGNCC 2 cut(s) 134, 1040
AsuC2I CCSGG 1 cut(s) 869
AsuHPI GGTGA 7 cut(s) 213, 609, 914, 1012, 1269, 1411, 1760
AsuII TTCGAA 2 cut(s) 13, 1527
AvaI CYCGRG 1 cut(s) 1337
AvaII GGWCC 1 cut(s) 1040
BaeI ACNNNNGTAYC 2 cut(s) 1604, 1637
BanII GRGCYC 2 cut(s) 874, 1855
BarI GAAGNNNNNNTAC 2 cut(s) 1460, 1492
BbsI GAAGAC 2 cut(s) 1721, 1999
Bbv12I GWGCWC 1 cut(s) 1855
BbvI GCAGC 2 cut(s) 1763, 2303
BccI CCATC 3 cut(s) 281, 505, 1575
BceAI ACGGC 2 cut(s) 366, 2160
BcgI CGANNNNNNTGC 2 cut(s) 931, 965
BciT130I CCWGG 2 cut(s) 132, 900
BclI TGATCA 1 cut(s) 673
BcnI CCSGG 1 cut(s) 869
BcoDI GTCTC 3 cut(s) 1256, 1579, 2135
BcuI ACTAGT 2 cut(s) 815, 1615
BfaI CTAG 8 cut(s) 212, 795, 816, 855, 1520, 1616, 1848, 2118
BfmI CTRYAG 2 cut(s) 543, 765
BfuAI ACCTGC 1 cut(s) 2005
BglII AGATCT 1 cut(s) 1844
BisI GCNGC 2 cut(s) 1752, 2292
BlsI GCNGC 2 cut(s) 1753, 2293
Bme1390I CCNGG 3 cut(s) 132, 869, 900
Bme18I GGWCC 1 cut(s) 1040
BmeRI GACNNNNNGTC 1 cut(s) 863
BmeT110I CYCGRG 1 cut(s) 1337
BmgT120I GGNCC 2 cut(s) 134, 1040
BmiI GGNNCC 1 cut(s) 1161
BmrFI CCNGG 3 cut(s) 132, 869, 900
BmrI ACTGGG 1 cut(s) 655
BmsI GCATC 5 cut(s) 285, 963, 2158, 2269, 2407
BmuI ACTGGG 1 cut(s) 655
BoxI GACNNNNGTC 1 cut(s) 809
BpiI GAAGAC 2 cut(s) 1721, 1999
BpmI CTGGAG 1 cut(s) 1734
Bpu14I TTCGAA 2 cut(s) 13, 1527
BpuEI CTTGAG 1 cut(s) 1997
BpuMI CCSGG 1 cut(s) 869
BsaBI GATNNNNATC 1 cut(s) 953
BsaJI CCNNGG 2 cut(s) 348, 1510
BsaWI WCCGGW 1 cut(s) 161
Bsc4I CCNNNNNNNGG 5 cut(s) 778, 1169, 1243, 1292, 2330
Bse1I ACTGG 5 cut(s) 205, 268, 620, 650, 1717
Bse8I GATNNNNATC 1 cut(s) 953
BseBI CCWGG 2 cut(s) 132, 900
BseDI CCNNGG 2 cut(s) 348, 1510
BseGI GGATG 1 cut(s) 56
BseJI GATNNNNATC 1 cut(s) 953
BseLI CCNNNNNNNGG 5 cut(s) 778, 1169, 1243, 1292, 2330
BseMII CTCAG 6 cut(s) 330, 549, 1902, 2130, 2139, 2140
BseNI ACTGG 5 cut(s) 205, 268, 620, 650, 1717
BseRI GAGGAG 6 cut(s) 35, 316, 319, 322, 480, 1311
BseXI GCAGC 2 cut(s) 1763, 2303
BseYI CCCAGC 1 cut(s) 1754
BsgI GTGCAG 1 cut(s) 1770
BshFI GGCC 5 cut(s) 135, 1515, 1836, 2182, 2192
BsiHKAI GWGCWC 1 cut(s) 1855
BsiHKCI CYCGRG 1 cut(s) 1337
BsiSI CCGG 2 cut(s) 162, 868
BslFI GGGAC 2 cut(s) 1654, 2375
BslI CCNNNNNNNGG 5 cut(s) 778, 1169, 1243, 1292, 2330
BsmAI GTCTC 3 cut(s) 1256, 1579, 2135
BsmBI CGTCTC 1 cut(s) 2135
BsmFI GGGAC 2 cut(s) 1654, 2375
BsmI GAATGC 2 cut(s) 2055, 2294
BsnI GGCC 5 cut(s) 135, 1515, 1836, 2182, 2192
BsoBI CYCGRG 1 cut(s) 1337
Bsp119I TTCGAA 2 cut(s) 13, 1527
Bsp1286I GDGCHC 2 cut(s) 874, 1855
Bsp143I GATC 8 cut(s) 673, 948, 1112, 1502, 1651, 1844, 1906, 2005
BspACI CCGC 2 cut(s) 1558, 1564
BspANI GGCC 5 cut(s) 135, 1515, 1836, 2182, 2192
BspCNI CTCAG 6 cut(s) 329, 550, 1903, 2131, 2139, 2140
BspHI TCATGA 1 cut(s) 2257
BspLI GGNNCC 1 cut(s) 1161
BspMI ACCTGC 1 cut(s) 2005
BspPI GGATC 4 cut(s) 1120, 1510, 1901, 2000
BspT104I TTCGAA 2 cut(s) 13, 1527
BsrI ACTGG 5 cut(s) 205, 268, 620, 650, 1717
BssECI CCNNGG 2 cut(s) 348, 1510
BssMI GATC 8 cut(s) 673, 948, 1112, 1502, 1651, 1844, 1906, 2005
BssT1I CCWWGG 1 cut(s) 1510
Bst2UI CCWGG 2 cut(s) 132, 900
Bst4CI ACNGT 3 cut(s) 101, 390, 1592
BstBI TTCGAA 2 cut(s) 13, 1527
BstC8I GCNNGC 3 cut(s) 308, 1287, 1473
BstDEI CTNAG 7 cut(s) 316, 558, 1143, 1911, 2126, 2139, 2148
BstDSI CCRYGG 1 cut(s) 348
BstEII GGTNACC 2 cut(s) 1275, 1898
BstF5I GGATG 1 cut(s) 56
BstHHI GCGC 2 cut(s) 123, 942
BstKTI GATC 8 cut(s) 676, 951, 1115, 1505, 1654, 1847, 1909, 2008
BstMAI GTCTC 3 cut(s) 1256, 1579, 2135
BstMBI GATC 8 cut(s) 673, 948, 1112, 1502, 1651, 1844, 1906, 2005
BstMWI GCNNNNNNNGC 6 cut(s) 692, 939, 1489, 1823, 2144, 2288
BstNI CCWGG 2 cut(s) 132, 900
BstNSI RCATGY 1 cut(s) 1871
BstPAI GACNNNNGTC 1 cut(s) 809
BstPI GGTNACC 2 cut(s) 1275, 1898
BstSCI CCNGG 3 cut(s) 130, 867, 898
BstSFI CTRYAG 2 cut(s) 543, 765
BstV1I GCAGC 2 cut(s) 1763, 2303
BstV2I GAAGAC 2 cut(s) 1721, 1999
BstX2I RGATCY 1 cut(s) 1844
BstYI RGATCY 1 cut(s) 1844
BsuRI GGCC 5 cut(s) 135, 1515, 1836, 2182, 2192
BtgI CCRYGG 1 cut(s) 348
BtgZI GCGATG 1 cut(s) 538
BtsCI GGATG 1 cut(s) 56
BtsIMutI CAGTG 2 cut(s) 279, 386
BveI ACCTGC 1 cut(s) 2005
Cac8I GCNNGC 3 cut(s) 308, 1287, 1473
CciI TCATGA 1 cut(s) 2257
CfoI GCGC 2 cut(s) 123, 942
Cfr13I GGNCC 2 cut(s) 134, 1040
Csp6I GTAC 4 cut(s) 291, 302, 1710, 1915
CviAII CATG 9 cut(s) 110, 828, 1493, 1630, 1811, 1868, 1918, 2059, 2258
CviQI GTAC 4 cut(s) 291, 302, 1710, 1915
DdeI CTNAG 7 cut(s) 316, 558, 1143, 1911, 2126, 2139, 2148
DpnI GATC 8 cut(s) 675, 950, 1114, 1504, 1653, 1846, 1908, 2007
DpnII GATC 8 cut(s) 673, 948, 1112, 1502, 1651, 1844, 1906, 2005
DraI TTTAAA 1 cut(s) 720
DriI GACNNNNNGTC 1 cut(s) 863
EaeI YGGCCR 1 cut(s) 2190
Eam1105I GACNNNNNGTC 1 cut(s) 863
Ecl136II GAGCTC 1 cut(s) 1853
Eco130I CCWWGG 1 cut(s) 1510
Eco147I AGGCCT 1 cut(s) 1515
Eco24I GRGCYC 2 cut(s) 874, 1855
Eco32I GATATC 1 cut(s) 1350
Eco47I GGWCC 1 cut(s) 1040
Eco53kI GAGCTC 1 cut(s) 1853
Eco57I CTGAAG 3 cut(s) 303, 1251, 2213
Eco88I CYCGRG 1 cut(s) 1337
Eco91I GGTNACC 2 cut(s) 1275, 1898
EcoICRI GAGCTC 1 cut(s) 1853
EcoO109I RGGNCCY 1 cut(s) 1040
EcoO65I GGTNACC 2 cut(s) 1275, 1898
EcoRI GAATTC 2 cut(s) 440, 1523
EcoRII CCWGG 2 cut(s) 130, 898
EcoRV GATATC 1 cut(s) 1350
EcoT14I CCWWGG 1 cut(s) 1510
EcoT22I ATGCAT 2 cut(s) 1075, 2221
EcoT38I GRGCYC 2 cut(s) 874, 1855
ErhI CCWWGG 1 cut(s) 1510
Esp3I CGTCTC 1 cut(s) 2135
FaeI CATG 9 cut(s) 113, 831, 1496, 1633, 1814, 1871, 1921, 2062, 2261
FalI AAGNNNNNCTT 6 cut(s) 428, 460, 1400, 1432, 2058, 2090
FaqI GGGAC 2 cut(s) 1654, 2375
FatI CATG 9 cut(s) 109, 827, 1492, 1629, 1810, 1867, 1917, 2058, 2257
FbaI TGATCA 1 cut(s) 673
Fnu4HI GCNGC 2 cut(s) 1752, 2292
FokI GGATG 1 cut(s) 43
FriOI GRGCYC 2 cut(s) 874, 1855
Fsp4HI GCNGC 2 cut(s) 1752, 2292
FspBI CTAG 8 cut(s) 212, 795, 816, 855, 1520, 1616, 1848, 2118
FspI TGCGCA 1 cut(s) 941
GlaI GCGC 2 cut(s) 122, 941
GluI GCNGC 2 cut(s) 1752, 2292
GsaI CCCAGC 1 cut(s) 1758
GsuI CTGGAG 1 cut(s) 1734
HaeIII GGCC 5 cut(s) 135, 1515, 1836, 2182, 2192
HapII CCGG 2 cut(s) 162, 868
HhaI GCGC 2 cut(s) 123, 942
Hin1II CATG 9 cut(s) 113, 831, 1496, 1633, 1814, 1871, 1921, 2062, 2261
Hin6I GCGC 2 cut(s) 121, 940
HinP1I GCGC 2 cut(s) 121, 940
HindIII AAGCTT 1 cut(s) 2243
HpaII CCGG 2 cut(s) 162, 868
HphI GGTGA 7 cut(s) 213, 609, 914, 1012, 1269, 1411, 1760
Hpy166II GTNNAC 4 cut(s) 107, 784, 1785, 1954
Hpy188III TCNNGA 9 cut(s) 1088, 1337, 1500, 1842, 1848, 1856, 1910, 1976, 2258
Hpy8I GTNNAC 4 cut(s) 107, 784, 1785, 1954
HpyAV CCTTC 4 cut(s) 71, 708, 991, 2334
HpyCH4III ACNGT 3 cut(s) 101, 390, 1592
HpyCH4IV ACGT 3 cut(s) 606, 1643, 1671
HpyF10VI GCNNNNNNNGC 6 cut(s) 692, 939, 1489, 1823, 2144, 2288
HpyF3I CTNAG 7 cut(s) 316, 558, 1143, 1911, 2126, 2139, 2148
HpySE526I ACGT 3 cut(s) 606, 1643, 1671
Hsp92II CATG 9 cut(s) 113, 831, 1496, 1633, 1814, 1871, 1921, 2062, 2261
HspAI GCGC 2 cut(s) 121, 940
Ksp22I TGATCA 1 cut(s) 673
Kzo9I GATC 8 cut(s) 673, 948, 1112, 1502, 1651, 1844, 1906, 2005
LmnI GCTCC 4 cut(s) 1123, 1165, 1319, 1715
Lsp1109I GCAGC 2 cut(s) 1763, 2303
LweI GCATC 5 cut(s) 285, 963, 2158, 2269, 2407
MaeI CTAG 8 cut(s) 212, 795, 816, 855, 1520, 1616, 1848, 2118
MaeII ACGT 3 cut(s) 606, 1643, 1671
MaeIII GTNAC 8 cut(s) 811, 818, 881, 902, 1191, 1275, 1586, 1898
MalI GATC 8 cut(s) 675, 950, 1114, 1504, 1653, 1846, 1908, 2007
MboI GATC 8 cut(s) 673, 948, 1112, 1502, 1651, 1844, 1906, 2005
MboII GAAGA 8 cut(s) 296, 1159, 1357, 1721, 1964, 2004, 2085, 2177
MfeI CAATTG 3 cut(s) 1931, 2307, 2402
MflI RGATCY 1 cut(s) 1844
MhlI GDGCHC 2 cut(s) 874, 1855
MlyI GAGTC 4 cut(s) 461, 594, 770, 1022
MmeI TCCRAC 2 cut(s) 589, 2033
Mph1103I ATGCAT 2 cut(s) 1075, 2221
MroXI GAANNNNTTC 3 cut(s) 9, 398, 444
MseI TTAA 7 cut(s) 719, 915, 1026, 1208, 1580, 1884, 2247
MslI CAYNNNNRTG 6 cut(s) 114, 879, 1457, 1659, 1746, 1773
MspA1I CMGCKG 1 cut(s) 1754
MspI CCGG 2 cut(s) 162, 868
MspR9I CCNGG 3 cut(s) 132, 869, 900
MunI CAATTG 3 cut(s) 1931, 2307, 2402
Mva1269I GAATGC 2 cut(s) 2055, 2294
MvaI CCWGG 2 cut(s) 132, 900
MwoI GCNNNNNNNGC 6 cut(s) 692, 939, 1489, 1823, 2144, 2288
NciI CCSGG 1 cut(s) 869
NdeII GATC 8 cut(s) 673, 948, 1112, 1502, 1651, 1844, 1906, 2005
NlaIII CATG 9 cut(s) 113, 831, 1496, 1633, 1814, 1871, 1921, 2062, 2261
NlaIV GGNNCC 1 cut(s) 1161
NmuCI GTSAC 5 cut(s) 811, 881, 902, 1191, 1275
NsbI TGCGCA 1 cut(s) 941
NsiI ATGCAT 2 cut(s) 1075, 2221
NspI RCATGY 1 cut(s) 1871
NspV TTCGAA 2 cut(s) 13, 1527
OliI CACNNNNGTG 3 cut(s) 879, 1457, 1746
PaeR7I CTCGAG 1 cut(s) 1337
PagI TCATGA 1 cut(s) 2257
PceI AGGCCT 1 cut(s) 1515
PctI GAATGC 2 cut(s) 2055, 2294
PdmI GAANNNNTTC 3 cut(s) 9, 398, 444
PfeI GAWTC 8 cut(s) 15, 152, 371, 1139, 1664, 1761, 2090, 2114
PkrI GCNGC 2 cut(s) 1753, 2293
PleI GAGTC 4 cut(s) 461, 594, 769, 1021
PpsI GAGTC 4 cut(s) 461, 594, 769, 1021
PpuMI RGGWCCY 1 cut(s) 1040
PshAI GACNNNNGTC 1 cut(s) 809
Psp124BI GAGCTC 1 cut(s) 1855
Psp1406I AACGTT 1 cut(s) 606
Psp5II RGGWCCY 1 cut(s) 1040
Psp6I CCWGG 2 cut(s) 130, 898
PspEI GGTNACC 2 cut(s) 1275, 1898
PspFI CCCAGC 1 cut(s) 1754
PspGI CCWGG 2 cut(s) 130, 898
PspN4I GGNNCC 1 cut(s) 1161
PspPI GGNCC 2 cut(s) 134, 1040
PspPPI RGGWCCY 1 cut(s) 1040
PsuI RGATCY 1 cut(s) 1844
PvuII CAGCTG 1 cut(s) 1754
RsaI GTAC 4 cut(s) 292, 303, 1711, 1916
RsaNI GTAC 4 cut(s) 291, 302, 1710, 1915
RseI CAYNNNNRTG 6 cut(s) 114, 879, 1457, 1659, 1746, 1773
SacI GAGCTC 1 cut(s) 1855
SaqAI TTAA 7 cut(s) 719, 915, 1026, 1208, 1580, 1884, 2247
SatI GCNGC 2 cut(s) 1752, 2292
Sau3AI GATC 8 cut(s) 673, 948, 1112, 1502, 1651, 1844, 1906, 2005
Sau96I GGNCC 2 cut(s) 134, 1040
SchI GAGTC 4 cut(s) 461, 594, 770, 1022
ScrFI CCNGG 3 cut(s) 132, 869, 900
SduI GDGCHC 2 cut(s) 874, 1855
SfaNI GCATC 5 cut(s) 285, 963, 2158, 2269, 2407
SfcI CTRYAG 2 cut(s) 543, 765
Sfr274I CTCGAG 1 cut(s) 1337
SfuI TTCGAA 2 cut(s) 13, 1527
SinI GGWCC 1 cut(s) 1040
SlaI CTCGAG 1 cut(s) 1337
SmiI ATTTAAAT 1 cut(s) 720
SmiMI CAYNNNNRTG 6 cut(s) 114, 879, 1457, 1659, 1746, 1773
SmlI CTYRAG 2 cut(s) 1337, 1976
SmoI CTYRAG 2 cut(s) 1337, 1976
SpeI ACTAGT 2 cut(s) 815, 1615
SseBI AGGCCT 1 cut(s) 1515
SsiI CCGC 2 cut(s) 1558, 1564
SspI AATATT 1 cut(s) 1095
SspMI CTAG 8 cut(s) 212, 795, 816, 855, 1520, 1616, 1848, 2118
SstI GAGCTC 1 cut(s) 1855
StuI AGGCCT 1 cut(s) 1515
StyD4I CCNGG 3 cut(s) 130, 867, 898
StyI CCWWGG 1 cut(s) 1510
SwaI ATTTAAAT 1 cut(s) 720
TaaI ACNGT 3 cut(s) 101, 390, 1592
TaiI ACGT 3 cut(s) 609, 1646, 1674
TaqI TCGA 8 cut(s) 13, 155, 335, 1338, 1527, 1550, 1841, 2336
TatI WGTACW 2 cut(s) 1709, 1914
TfiI GAWTC 8 cut(s) 15, 152, 371, 1139, 1664, 1761, 2090, 2114
Tru1I TTAA 7 cut(s) 719, 915, 1026, 1208, 1580, 1884, 2247
Tru9I TTAA 7 cut(s) 719, 915, 1026, 1208, 1580, 1884, 2247
TscAI CASTG 2 cut(s) 286, 393
TseFI GTSAC 5 cut(s) 811, 881, 902, 1191, 1275
TseI GCWGC 2 cut(s) 1751, 2291
Tsp45I GTSAC 5 cut(s) 811, 881, 902, 1191, 1275
TspRI CASTG 2 cut(s) 286, 393
VpaK11BI GGWCC 1 cut(s) 1040
XapI RAATTY 7 cut(s) 139, 440, 735, 1362, 1523, 1704, 2391
XbaI TCTAGA 1 cut(s) 1847
XceI RCATGY 1 cut(s) 1871
XcmI CCANNNNNNNNNTGG 1 cut(s) 2408
XhoI CTCGAG 1 cut(s) 1337
XmnI GAANNNNTTC 3 cut(s) 9, 398, 444
XspI CTAG 8 cut(s) 212, 795, 816, 855, 1520, 1616, 1848, 2118
Zsp2I ATGCAT 2 cut(s) 1075, 2221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.