Rmu_sc0000751.1_g000026

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000751.1
OG0000413
Physical Location & Seq
Reverse (-)
58666 .. 59478
813 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000751.1_g000026.1.cds

Sequence Viewer

Length: 813 bp
atgatactagtgtatgagttcatggaaaaagggaccttgagagatcatttgtatgaatcggatgtgcctcgcttgtcgtggaagcaaagacttgaaatttgcataggttcagcaactggacttgattatctccataaaggtgcagcagggggcatcatccaccgtgatgtgaagtccaccaacatattacttgatgagaaccttgttgctaaagtcgctgacttcgggctttcgaggtctggccctcttgatgaaactcatgtcagcacggttgtgaaaggcactatcggttaccttgatcccgagtacatgatgtcacagcagttgacagagaagtctgatgtgtactcatttggtgtagttcttcttgaggttttatgtggaagacctgctattgatataacgcttccaagagagaaagtgaacttagctgaatgggttgtgctgtgcaagaaagaagggttgctagaagaggtcattgacgtttcattgaaggatcatattgatcctagctcactgagacattttattgagactgcagagaagtgtttgcaacacgattcttctgataggcccactatggctgaggtgctgtgggatttggactatacattgaagcttcatcaaactgcgaggcttggagaagcccatgaggacagcactaccagtgcttcatcagcttttttactaccaaatattcggcattttgcttcacttgattcgacagttaacagagctgatatgagggacgatgagatggagtccacagaaagcgaaattttctcccaactgagaatcggcgaggccagataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

270

Amino Acids

30.34

Weight (kDa)

4.92

Isoelectric Point (pI)

41.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000413)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G23200
fragaria_vesca FvH4_1g16860 FvH4_1g16861
malus_domestica MD02G1018900.v1.1 MD15G1289500.v1.1 MD15G1289600.v1.1 MD15G1289700.v1.1
prunus_persica Prupe.6G227800_v2.0.a1 Prupe.6G228000_v2.0.a1 Prupe.6G228100_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228200_v2.0.a1 Prupe.6G228300_v2.0.a1
pyrus_communis pycom02g01680 pycom02g01690 pycom15g25310 pycom15g25330 pycom15g25340
rosa_chinensis RchiOBHm_Chr1g0324321 RchiOBHm_Chr1g0324331 RchiOBHm_Chr1g0324341 RchiOBHm_Chr1g0324401 RchiOBHm_Chr1g0324441 RchiOBHm_Chr2g0106751 RchiOBHm_Chr2g0106761 RchiOBHm_Chr2g0106771 RchiOBHm_Chr2g0106781 RchiOBHm_Chr2g0106801 RchiOBHm_Chr2g0106811 RchiOBHm_Chr2g0106821
rosa_laevigata RLG00000017539 RLG00000017540 RLG00000017541 RLG00000030200 RLG00000030201
rosa_multiflora Rmu_sc0000751.1_g000001 Rmu_sc0000751.1_g000002 Rmu_sc0000751.1_g000003 Rmu_sc0000751.1_g000005 Rmu_sc0000751.1_g000007 Rmu_sc0000751.1_g000008 Rmu_sc0000751.1_g000018 Rmu_sc0000751.1_g000019 Rmu_sc0000751.1_g000026 Rmu_sc0000751.1_g000027 Rmu_sc0000751.1_g000028 Rmu_sc0000751.1_g000029 Rmu_sc0003410.1_g000012 Rmu_sc0004000.1_g000023 Rmu_sc0004000.1_g000024 Rmu_sc0004082.1_g000015 Rmu_sc0004082.1_g000017 Rmu_sc0026507.1_g000001 Rmu_sc0031196.1_g000001 Rmu_sc0039591.1_g000001
rosa_roxburghii Rroxscaffold_159G00432710 Rroxscaffold_159G00432780 Rroxscaffold_159G00432840 Rroxscaffold_159G00433010 Rroxscaffold_2G00098070 Rroxscaffold_2G00136770 Rroxscaffold_4G00325540 Rroxscaffold_4G00325630 Rroxscaffold_4G00325680
rosa_rugosa Rorug01G0045700 Rorug02G0138500 Rorug02G0138600 Rorug02G0138700 Rorug02G0138800 Rorug02G0138900
rosa_samantha Rh1AG061400 Rh1BG052300 Rh1CG063400 Rh1CG063700 Rh1DG067800 Rh2AG189400 Rh2AG189800 Rh2AG190000 Rh2AG190100 Rh2BG201100 Rh2BG201300 Rh2CG194500 Rh2CG194600 Rh2CG194700 Rh2DG195700 Rh2DG195900 Rh2DG196300 Rh2DG196400 Rh2DG196500 Rh2DG196600
rosa_wichuraiana Rw1G004230 Rw1G005210 Rw2G014900 Rw2G014910 Rw2G014930 Rw2G014940 Rw2G014950 Rw2G014960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 334
Acc36I ACCTGC 1 cut(s) 397
AclWI GGATC 3 cut(s) 293, 500, 504
AcsI RAATTY 2 cut(s) 96, 777
AfaI GTAC 2 cut(s) 308, 347
AgsI TTSAA 3 cut(s) 95, 493, 616
AhlI ACTAGT 1 cut(s) 7
AleI CACNNNNGTG 1 cut(s) 272
AluBI AGCT 5 cut(s) 431, 513, 619, 680, 737
AluI AGCT 5 cut(s) 431, 513, 619, 680, 737
Alw26I GTCTC 2 cut(s) 514, 527
AlwI GGATC 3 cut(s) 293, 500, 504
AlwNI CAGNNNCTG 1 cut(s) 116
Ama87I CYCGRG 1 cut(s) 302
AoxI GGCC 3 cut(s) 241, 572, 804
ApeKI GCWGC 1 cut(s) 143
ApoI RAATTY 2 cut(s) 96, 777
ArsI GACNNNNNNTTYG 2 cut(s) 81, 113
AspS9I GGNCC 3 cut(s) 33, 242, 573
AvaI CYCGRG 1 cut(s) 302
AvaII GGWCC 1 cut(s) 33
BaeI ACNNNNGTAYC 1 cut(s) 29
BbsI GAAGAC 1 cut(s) 391
BbvCI CCTCAGC 1 cut(s) 585
BbvI GCAGC 1 cut(s) 155
BccI CCATC 1 cut(s) 751
BcoDI GTCTC 2 cut(s) 514, 527
BcuI ACTAGT 1 cut(s) 7
BfaI CTAG 3 cut(s) 8, 467, 510
BfmI CTRYAG 1 cut(s) 537
BfuAI ACCTGC 1 cut(s) 397
BisI GCNGC 1 cut(s) 144
BlsI GCNGC 1 cut(s) 145
Bme18I GGWCC 1 cut(s) 33
BmeT110I CYCGRG 1 cut(s) 302
BmgT120I GGNCC 3 cut(s) 33, 242, 573
BmiI GGNNCC 1 cut(s) 34
BmsI GCATC 1 cut(s) 162
BpiI GAAGAC 1 cut(s) 391
Bpu10I CCTNAGC 1 cut(s) 585
BpuEI CTTGAG 2 cut(s) 58, 389
Bse1I ACTGG 2 cut(s) 121, 666
BseGI GGATG 2 cut(s) 67, 156
BseMII CTCAG 3 cut(s) 509, 576, 782
BseNI ACTGG 2 cut(s) 121, 666
BseXI GCAGC 1 cut(s) 155
BsgI GTGCAG 1 cut(s) 162
BshFI GGCC 3 cut(s) 243, 574, 806
BsiHKCI CYCGRG 1 cut(s) 302
BslFI GGGAC 2 cut(s) 46, 761
BsmAI GTCTC 2 cut(s) 514, 527
BsmFI GGGAC 2 cut(s) 46, 761
BsnI GGCC 3 cut(s) 243, 574, 806
BsoBI CYCGRG 1 cut(s) 302
Bsp143I GATC 4 cut(s) 43, 298, 496, 505
BspANI GGCC 3 cut(s) 243, 574, 806
BspCNI CTCAG 3 cut(s) 510, 577, 783
BspLI GGNNCC 1 cut(s) 34
BspMAI CTGCAG 1 cut(s) 541
BspMI ACCTGC 1 cut(s) 397
BspPI GGATC 3 cut(s) 293, 500, 504
BsrI ACTGG 2 cut(s) 121, 666
BssMI GATC 4 cut(s) 43, 298, 496, 505
Bst4CI ACNGT 3 cut(s) 164, 271, 727
Bst6I CTCTTC 1 cut(s) 465
BstDEI CTNAG 4 cut(s) 427, 518, 585, 791
BstEII GGTNACC 1 cut(s) 290
BstF5I GGATG 2 cut(s) 67, 156
BstKTI GATC 4 cut(s) 46, 301, 499, 508
BstMAI GTCTC 2 cut(s) 514, 527
BstMBI GATC 4 cut(s) 43, 298, 496, 505
BstMWI GCNNNNNNNGC 2 cut(s) 215, 677
BstPI GGTNACC 1 cut(s) 290
BstSFI CTRYAG 1 cut(s) 537
BstV1I GCAGC 1 cut(s) 155
BstV2I GAAGAC 1 cut(s) 391
BsuRI GGCC 3 cut(s) 243, 574, 806
BtsCI GGATG 2 cut(s) 67, 156
BtsIMutI CAGTG 2 cut(s) 515, 673
BveI ACCTGC 1 cut(s) 397
CaiI CAGNNNCTG 1 cut(s) 116
Cfr13I GGNCC 3 cut(s) 33, 242, 573
Csp6I GTAC 2 cut(s) 307, 346
CviAII CATG 4 cut(s) 22, 260, 310, 650
CviQI GTAC 2 cut(s) 307, 346
DdeI CTNAG 4 cut(s) 427, 518, 585, 791
DpnI GATC 4 cut(s) 45, 300, 498, 507
DpnII GATC 4 cut(s) 43, 298, 496, 505
DrdI GACNNNNNNGTC 1 cut(s) 334
DseDI GACNNNNNNGTC 1 cut(s) 334
Eam1104I CTCTTC 1 cut(s) 465
EarI CTCTTC 1 cut(s) 465
Eco47I GGWCC 1 cut(s) 33
Eco88I CYCGRG 1 cut(s) 302
Eco91I GGTNACC 1 cut(s) 290
EcoO109I RGGNCCY 1 cut(s) 33
EcoO65I GGTNACC 1 cut(s) 290
FaeI CATG 4 cut(s) 25, 263, 313, 653
FaqI GGGAC 2 cut(s) 46, 761
FatI CATG 4 cut(s) 21, 259, 309, 649
Fnu4HI GCNGC 1 cut(s) 144
FokI GGATG 2 cut(s) 74, 143
Fsp4HI GCNGC 1 cut(s) 144
FspBI CTAG 3 cut(s) 8, 467, 510
GluI GCNGC 1 cut(s) 144
HaeIII GGCC 3 cut(s) 243, 574, 806
Hin1II CATG 4 cut(s) 25, 263, 313, 653
HincII GTYRAC 2 cut(s) 327, 730
HindII GTYRAC 2 cut(s) 327, 730
HindIII AAGCTT 1 cut(s) 617
HinfI GANTC 5 cut(s) 56, 560, 719, 761, 795
HpaI GTTAAC 1 cut(s) 730
Hpy166II GTNNAC 6 cut(s) 177, 327, 346, 424, 730, 765
Hpy188I TCNGA 3 cut(s) 61, 340, 568
Hpy188III TCNNGA 3 cut(s) 248, 302, 368
Hpy8I GTNNAC 6 cut(s) 177, 327, 346, 424, 730, 765
HpyAV CCTTC 2 cut(s) 452, 487
HpyCH4III ACNGT 3 cut(s) 164, 271, 727
HpyCH4IV ACGT 1 cut(s) 483
HpyCH4V TGCA 5 cut(s) 102, 143, 450, 539, 553
HpyF10VI GCNNNNNNNGC 2 cut(s) 215, 677
HpyF3I CTNAG 4 cut(s) 427, 518, 585, 791
HpySE526I ACGT 1 cut(s) 483
Hsp92II CATG 4 cut(s) 25, 263, 313, 653
KspAI GTTAAC 1 cut(s) 730
Kzo9I GATC 4 cut(s) 43, 298, 496, 505
LpnPI CCDG 5 cut(s) 102, 132, 225, 402, 679
Lsp1109I GCAGC 1 cut(s) 155
LweI GCATC 1 cut(s) 162
MaeI CTAG 3 cut(s) 8, 467, 510
MaeII ACGT 1 cut(s) 483
MaeIII GTNAC 2 cut(s) 290, 315
MalI GATC 4 cut(s) 45, 300, 498, 507
MboI GATC 4 cut(s) 43, 298, 496, 505
MboII GAAGA 4 cut(s) 356, 396, 482, 555
MluCI AATT 2 cut(s) 96, 777
MlyI GAGTC 1 cut(s) 770
MseI TTAA 1 cut(s) 729
MslI CAYNNNNRTG 4 cut(s) 51, 138, 165, 272
MwoI GCNNNNNNNGC 2 cut(s) 215, 677
NdeII GATC 4 cut(s) 43, 298, 496, 505
NlaIII CATG 4 cut(s) 25, 263, 313, 653
NlaIV GGNNCC 1 cut(s) 34
NmuCI GTSAC 1 cut(s) 315
OliI CACNNNNGTG 1 cut(s) 272
PfeI GAWTC 4 cut(s) 56, 560, 719, 795
PkrI GCNGC 1 cut(s) 145
PleI GAGTC 1 cut(s) 769
PpsI GAGTC 1 cut(s) 769
PpuMI RGGWCCY 1 cut(s) 33
Psp5II RGGWCCY 1 cut(s) 33
PspEI GGTNACC 1 cut(s) 290
PspN4I GGNNCC 1 cut(s) 34
PspPI GGNCC 3 cut(s) 33, 242, 573
PspPPI RGGWCCY 1 cut(s) 33
PstI CTGCAG 1 cut(s) 541
PstNI CAGNNNCTG 1 cut(s) 116
RsaI GTAC 2 cut(s) 308, 347
RsaNI GTAC 2 cut(s) 307, 346
RseI CAYNNNNRTG 4 cut(s) 51, 138, 165, 272
SaqAI TTAA 1 cut(s) 729
SatI GCNGC 1 cut(s) 144
Sau3AI GATC 4 cut(s) 43, 298, 496, 505
Sau96I GGNCC 3 cut(s) 33, 242, 573
SchI GAGTC 1 cut(s) 770
SfaNI GCATC 1 cut(s) 162
SfcI CTRYAG 1 cut(s) 537
SinI GGWCC 1 cut(s) 33
SmiMI CAYNNNNRTG 4 cut(s) 51, 138, 165, 272
SmlI CTYRAG 2 cut(s) 37, 368
SmoI CTYRAG 2 cut(s) 37, 368
SpeI ACTAGT 1 cut(s) 7
Sse9I AATT 2 cut(s) 96, 777
SspI AATATT 1 cut(s) 697
SspMI CTAG 3 cut(s) 8, 467, 510
TaaI ACNGT 3 cut(s) 164, 271, 727
TaiI ACGT 1 cut(s) 486
TaqI TCGA 2 cut(s) 233, 722
TasI AATT 2 cut(s) 96, 777
TatI WGTACW 2 cut(s) 306, 345
TfiI GAWTC 4 cut(s) 56, 560, 719, 795
Tru1I TTAA 1 cut(s) 729
Tru9I TTAA 1 cut(s) 729
TscAI CASTG 2 cut(s) 522, 673
TseFI GTSAC 1 cut(s) 315
TseI GCWGC 1 cut(s) 143
Tsp45I GTSAC 1 cut(s) 315
TspDTI ATGAA 6 cut(s) 10, 69, 267, 477, 611, 663
TspRI CASTG 2 cut(s) 522, 673
VpaK11BI GGWCC 1 cut(s) 33
XapI RAATTY 2 cut(s) 96, 777
XspI CTAG 3 cut(s) 8, 467, 510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.